HEADER PROTEIN BINDING 02-JAN-11 3Q6K TITLE SALIVARY PROTEIN FROM LUTZOMYIA LONGIPALPIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: 43.2 KDA SALIVARY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 19-399; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LUTZOMYIA LONGIPALPIS; SOURCE 3 ORGANISM_COMMON: SAND FLY; SOURCE 4 ORGANISM_TAXID: 7200; SOURCE 5 GENE: LJM-11, LJM11_CLU9; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET17B KEYWDS BETA PROPELLER, BINDING PROTEIN, SEROTONIN, SALIVARY GLAND, PROTEIN KEYWDS 2 BINDING, LIGAND BINGING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.F.ANDERSEN,X.XU,B.W.CHANG,N.COLLIN,J.G.VALENZUELA,J.M.RIBEIRO REVDAT 3 23-OCT-19 3Q6K 1 JRNL REVDAT 2 08-NOV-17 3Q6K 1 REMARK REVDAT 1 27-JUL-11 3Q6K 0 JRNL AUTH X.XU,F.OLIVEIRA,B.W.CHANG,N.COLLIN,R.GOMES,C.TEIXEIRA, JRNL AUTH 2 D.REYNOSO,V.MY PHAM,D.E.ELNAIEM,S.KAMHAWI,J.M.RIBEIRO, JRNL AUTH 3 J.G.VALENZUELA,J.F.ANDERSEN JRNL TITL STRUCTURE AND FUNCTION OF A "YELLOW" PROTEIN FROM SALIVA OF JRNL TITL 2 THE SAND FLY LUTZOMYIA LONGIPALPIS THAT CONFERS PROTECTIVE JRNL TITL 3 IMMUNITY AGAINST LEISHMANIA MAJOR INFECTION. JRNL REF J.BIOL.CHEM. V. 286 32383 2011 JRNL REFN ESSN 1083-351X JRNL PMID 21795673 JRNL DOI 10.1074/JBC.M111.268904 REMARK 2 REMARK 2 RESOLUTION. 2.52 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.52 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 34027 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1788 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.52 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.58 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2269 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.15 REMARK 3 BIN R VALUE (WORKING SET) : 0.4390 REMARK 3 BIN FREE R VALUE SET COUNT : 100 REMARK 3 BIN FREE R VALUE : 0.4060 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6107 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 52 REMARK 3 SOLVENT ATOMS : 60 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.28000 REMARK 3 B22 (A**2) : -1.28000 REMARK 3 B33 (A**2) : 1.92000 REMARK 3 B12 (A**2) : -0.64000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.461 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.294 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.227 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 22.994 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.910 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6329 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8569 ; 1.405 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 759 ; 6.670 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 292 ;36.196 ;23.425 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1058 ;17.137 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 40 ;18.207 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 883 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4880 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3795 ; 0.574 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6127 ; 1.089 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2534 ; 1.580 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2442 ; 2.652 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 380 REMARK 3 RESIDUE RANGE : A 382 A 383 REMARK 3 RESIDUE RANGE : A 384 A 415 REMARK 3 ORIGIN FOR THE GROUP (A): 37.1308 13.3305 -31.2799 REMARK 3 T TENSOR REMARK 3 T11: 0.4024 T22: 0.1808 REMARK 3 T33: 0.2148 T12: -0.1610 REMARK 3 T13: -0.2348 T23: 0.1315 REMARK 3 L TENSOR REMARK 3 L11: 1.5588 L22: 1.7348 REMARK 3 L33: 0.7063 L12: -0.2744 REMARK 3 L13: 0.2596 L23: 0.0841 REMARK 3 S TENSOR REMARK 3 S11: -0.0521 S12: -0.0990 S13: -0.1056 REMARK 3 S21: -0.3558 S22: 0.2437 S23: 0.2061 REMARK 3 S31: -0.0319 S32: -0.0433 S33: -0.1915 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 381 REMARK 3 RESIDUE RANGE : B 382 B 383 REMARK 3 RESIDUE RANGE : B 384 B 411 REMARK 3 ORIGIN FOR THE GROUP (A): 36.1861 -30.7513 -11.7861 REMARK 3 T TENSOR REMARK 3 T11: 0.3859 T22: 0.0917 REMARK 3 T33: 0.3625 T12: -0.1386 REMARK 3 T13: 0.0393 T23: -0.0472 REMARK 3 L TENSOR REMARK 3 L11: 0.7751 L22: 1.1148 REMARK 3 L33: 1.2457 L12: 0.1743 REMARK 3 L13: -0.1076 L23: -0.0058 REMARK 3 S TENSOR REMARK 3 S11: -0.3158 S12: -0.0275 S13: -0.0252 REMARK 3 S21: -0.0267 S22: -0.0075 S23: 0.0933 REMARK 3 S31: 0.0335 S32: -0.0175 S33: 0.3233 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3Q6K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JAN-11. REMARK 100 THE DEPOSITION ID IS D_1000063257. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35867 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.520 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 23.00 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.52 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.56 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.67900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: DIFFERENCE FOURIER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10 % PEG 6000, 0.1 M SODIUM CITRATE, 6 REMARK 280 MM NICKEL CHLORIDE, PH 5.4, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 163.16467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 81.58233 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 163.16467 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 81.58233 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 163.16467 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 81.58233 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 163.16467 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 81.58233 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 381 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 50 29.63 80.05 REMARK 500 SER A 112 -157.53 65.78 REMARK 500 ASN A 163 68.32 -109.37 REMARK 500 GLU A 204 -93.23 -94.89 REMARK 500 ALA A 245 163.37 178.25 REMARK 500 ASP A 276 132.83 -34.45 REMARK 500 PHE A 325 87.10 66.05 REMARK 500 ASN A 342 13.40 -147.43 REMARK 500 LYS A 349 16.05 80.98 REMARK 500 ASP A 378 -159.61 -74.52 REMARK 500 MET A 379 52.78 -159.50 REMARK 500 SER B 112 -173.89 64.99 REMARK 500 ASN B 134 79.66 -106.87 REMARK 500 ASN B 163 58.95 -112.70 REMARK 500 PHE B 325 85.36 64.63 REMARK 500 ASN B 342 8.26 -153.32 REMARK 500 LYS B 349 -4.24 85.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT B 382 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT A 382 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SRO B 383 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SRO A 383 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3Q6P RELATED DB: PDB REMARK 900 RELATED ID: 3Q6T RELATED DB: PDB DBREF 3Q6K A 1 381 UNP Q5WPU9 Q5WPU9_LUTLO 19 399 DBREF 3Q6K B 1 381 UNP Q5WPU9 Q5WPU9_LUTLO 19 399 SEQRES 1 A 381 ALA ASP THR GLN GLY TYR LYS TRP LYS GLN LEU LEU TYR SEQRES 2 A 381 ASN ASN VAL THR PRO GLY SER TYR ASN PRO ASP ASN MET SEQRES 3 A 381 ILE SER THR ALA PHE ALA TYR ASP ALA GLU GLY GLU LYS SEQRES 4 A 381 LEU PHE LEU ALA VAL PRO ARG LYS LEU PRO ARG VAL PRO SEQRES 5 A 381 TYR THR LEU ALA GLU VAL ASP THR LYS ASN SER LEU GLY SEQRES 6 A 381 VAL LYS GLY LYS HIS SER PRO LEU LEU ASN LYS PHE SER SEQRES 7 A 381 GLY HIS LYS THR GLY LYS GLU LEU THR SER ILE TYR GLN SEQRES 8 A 381 PRO VAL ILE ASP ASP CYS ARG ARG LEU TRP VAL VAL ASP SEQRES 9 A 381 ILE GLY SER VAL GLU TYR ARG SER ARG GLY ALA LYS ASP SEQRES 10 A 381 TYR PRO SER HIS ARG PRO ALA ILE VAL ALA TYR ASP LEU SEQRES 11 A 381 LYS GLN PRO ASN TYR PRO GLU VAL VAL ARG TYR TYR PHE SEQRES 12 A 381 PRO THR ARG LEU VAL GLU LYS PRO THR TYR PHE GLY GLY SEQRES 13 A 381 PHE ALA VAL ASP VAL ALA ASN PRO LYS GLY ASP CYS SER SEQRES 14 A 381 GLU THR PHE VAL TYR ILE THR ASN PHE LEU ARG GLY ALA SEQRES 15 A 381 LEU PHE ILE TYR ASP HIS LYS LYS GLN ASP SER TRP ASN SEQRES 16 A 381 VAL THR HIS PRO THR PHE LYS ALA GLU ARG PRO THR LYS SEQRES 17 A 381 PHE ASP TYR GLY GLY LYS GLU TYR GLU PHE LYS ALA GLY SEQRES 18 A 381 ILE PHE GLY ILE THR LEU GLY ASP ARG ASP SER GLU GLY SEQRES 19 A 381 ASN ARG PRO ALA TYR TYR LEU ALA GLY SER ALA ILE LYS SEQRES 20 A 381 VAL TYR SER VAL ASN THR LYS GLU LEU LYS GLN LYS GLY SEQRES 21 A 381 GLY LYS LEU ASN PRO GLU LEU LEU GLY ASN ARG GLY LYS SEQRES 22 A 381 TYR ASN ASP ALA ILE ALA LEU ALA TYR ASP PRO LYS THR SEQRES 23 A 381 LYS VAL ILE PHE PHE ALA GLU ALA ASN THR LYS GLN VAL SEQRES 24 A 381 SER CYS TRP ASN THR GLN LYS MET PRO LEU ARG MET LYS SEQRES 25 A 381 ASN THR ASP VAL VAL TYR THR SER SER ARG PHE VAL PHE SEQRES 26 A 381 GLY THR ASP ILE SER VAL ASP SER LYS GLY GLY LEU TRP SEQRES 27 A 381 PHE MET SER ASN GLY PHE PRO PRO ILE ARG LYS SER GLU SEQRES 28 A 381 LYS PHE LYS TYR ASP PHE PRO ARG TYR ARG LEU MET ARG SEQRES 29 A 381 ILE MET ASP THR GLN GLU ALA ILE ALA GLY THR ALA CYS SEQRES 30 A 381 ASP MET ASN ALA SEQRES 1 B 381 ALA ASP THR GLN GLY TYR LYS TRP LYS GLN LEU LEU TYR SEQRES 2 B 381 ASN ASN VAL THR PRO GLY SER TYR ASN PRO ASP ASN MET SEQRES 3 B 381 ILE SER THR ALA PHE ALA TYR ASP ALA GLU GLY GLU LYS SEQRES 4 B 381 LEU PHE LEU ALA VAL PRO ARG LYS LEU PRO ARG VAL PRO SEQRES 5 B 381 TYR THR LEU ALA GLU VAL ASP THR LYS ASN SER LEU GLY SEQRES 6 B 381 VAL LYS GLY LYS HIS SER PRO LEU LEU ASN LYS PHE SER SEQRES 7 B 381 GLY HIS LYS THR GLY LYS GLU LEU THR SER ILE TYR GLN SEQRES 8 B 381 PRO VAL ILE ASP ASP CYS ARG ARG LEU TRP VAL VAL ASP SEQRES 9 B 381 ILE GLY SER VAL GLU TYR ARG SER ARG GLY ALA LYS ASP SEQRES 10 B 381 TYR PRO SER HIS ARG PRO ALA ILE VAL ALA TYR ASP LEU SEQRES 11 B 381 LYS GLN PRO ASN TYR PRO GLU VAL VAL ARG TYR TYR PHE SEQRES 12 B 381 PRO THR ARG LEU VAL GLU LYS PRO THR TYR PHE GLY GLY SEQRES 13 B 381 PHE ALA VAL ASP VAL ALA ASN PRO LYS GLY ASP CYS SER SEQRES 14 B 381 GLU THR PHE VAL TYR ILE THR ASN PHE LEU ARG GLY ALA SEQRES 15 B 381 LEU PHE ILE TYR ASP HIS LYS LYS GLN ASP SER TRP ASN SEQRES 16 B 381 VAL THR HIS PRO THR PHE LYS ALA GLU ARG PRO THR LYS SEQRES 17 B 381 PHE ASP TYR GLY GLY LYS GLU TYR GLU PHE LYS ALA GLY SEQRES 18 B 381 ILE PHE GLY ILE THR LEU GLY ASP ARG ASP SER GLU GLY SEQRES 19 B 381 ASN ARG PRO ALA TYR TYR LEU ALA GLY SER ALA ILE LYS SEQRES 20 B 381 VAL TYR SER VAL ASN THR LYS GLU LEU LYS GLN LYS GLY SEQRES 21 B 381 GLY LYS LEU ASN PRO GLU LEU LEU GLY ASN ARG GLY LYS SEQRES 22 B 381 TYR ASN ASP ALA ILE ALA LEU ALA TYR ASP PRO LYS THR SEQRES 23 B 381 LYS VAL ILE PHE PHE ALA GLU ALA ASN THR LYS GLN VAL SEQRES 24 B 381 SER CYS TRP ASN THR GLN LYS MET PRO LEU ARG MET LYS SEQRES 25 B 381 ASN THR ASP VAL VAL TYR THR SER SER ARG PHE VAL PHE SEQRES 26 B 381 GLY THR ASP ILE SER VAL ASP SER LYS GLY GLY LEU TRP SEQRES 27 B 381 PHE MET SER ASN GLY PHE PRO PRO ILE ARG LYS SER GLU SEQRES 28 B 381 LYS PHE LYS TYR ASP PHE PRO ARG TYR ARG LEU MET ARG SEQRES 29 B 381 ILE MET ASP THR GLN GLU ALA ILE ALA GLY THR ALA CYS SEQRES 30 B 381 ASP MET ASN ALA HET CIT A 382 13 HET SRO A 383 13 HET CIT B 382 13 HET SRO B 383 13 HETNAM CIT CITRIC ACID HETNAM SRO SEROTONIN HETSYN SRO 3-(2-AMINOETHYL)-1H-INDOL-5-OL FORMUL 3 CIT 2(C6 H8 O7) FORMUL 4 SRO 2(C10 H12 N2 O) FORMUL 7 HOH *60(H2 O) HELIX 1 1 ASN A 22 MET A 26 5 5 HELIX 2 2 THR A 60 LEU A 64 1 5 HELIX 3 3 GLY A 114 TYR A 118 5 5 HELIX 4 4 PRO A 144 VAL A 148 5 5 HELIX 5 5 LYS A 150 THR A 152 5 3 HELIX 6 6 PRO A 199 LYS A 202 5 4 HELIX 7 7 THR A 253 LYS A 257 1 5 HELIX 8 8 ARG A 310 LYS A 312 5 3 HELIX 9 9 LYS A 349 PHE A 353 5 5 HELIX 10 10 ASP A 367 ALA A 373 1 7 HELIX 11 11 ASN B 22 MET B 26 5 5 HELIX 12 12 GLY B 114 TYR B 118 5 5 HELIX 13 13 PRO B 144 VAL B 148 5 5 HELIX 14 14 LYS B 150 THR B 152 5 3 HELIX 15 15 PRO B 199 LYS B 202 5 4 HELIX 16 16 THR B 253 LYS B 257 1 5 HELIX 17 17 ARG B 310 THR B 314 5 5 HELIX 18 18 LYS B 349 PHE B 353 5 5 HELIX 19 19 ASP B 367 ALA B 373 1 7 SHEET 1 A 4 GLN A 4 TRP A 8 0 SHEET 2 A 4 TYR A 360 ILE A 365 -1 O ARG A 364 N GLN A 4 SHEET 3 A 4 LEU A 337 SER A 341 -1 N SER A 341 O ARG A 361 SHEET 4 A 4 GLY A 326 VAL A 331 -1 N THR A 327 O MET A 340 SHEET 1 B 4 ALA A 30 ASP A 34 0 SHEET 2 B 4 LYS A 39 ALA A 43 -1 O LYS A 39 N ASP A 34 SHEET 3 B 4 LEU A 55 ASP A 59 -1 O ALA A 56 N LEU A 42 SHEET 4 B 4 ASN A 75 LYS A 76 -1 O ASN A 75 N GLU A 57 SHEET 1 C 4 ILE A 89 ILE A 94 0 SHEET 2 C 4 ARG A 99 ASP A 104 -1 O TRP A 101 N VAL A 93 SHEET 3 C 4 ALA A 124 ASP A 129 -1 O TYR A 128 N LEU A 100 SHEET 4 C 4 GLU A 137 TYR A 142 -1 O TYR A 141 N ILE A 125 SHEET 1 D 4 PHE A 154 VAL A 161 0 SHEET 2 D 4 THR A 171 ASN A 177 -1 O PHE A 172 N ASP A 160 SHEET 3 D 4 ALA A 182 ASP A 187 -1 O PHE A 184 N ILE A 175 SHEET 4 D 4 ASP A 192 THR A 197 -1 O ASP A 192 N ASP A 187 SHEET 1 E 2 THR A 207 TYR A 211 0 SHEET 2 E 2 LYS A 214 PHE A 218 -1 O PHE A 218 N THR A 207 SHEET 1 F 4 ILE A 222 LEU A 227 0 SHEET 2 F 4 PRO A 237 ALA A 242 -1 O TYR A 239 N THR A 226 SHEET 3 F 4 LYS A 247 ASN A 252 -1 O TYR A 249 N TYR A 240 SHEET 4 F 4 GLU A 266 ASN A 270 -1 O GLU A 266 N SER A 250 SHEET 1 G 4 ALA A 277 TYR A 282 0 SHEET 2 G 4 VAL A 288 GLU A 293 -1 O PHE A 290 N ALA A 281 SHEET 3 G 4 GLN A 298 ASN A 303 -1 O TRP A 302 N ILE A 289 SHEET 4 G 4 THR A 314 THR A 319 -1 O VAL A 317 N VAL A 299 SHEET 1 H 4 THR B 3 TRP B 8 0 SHEET 2 H 4 TYR B 360 ILE B 365 -1 O ARG B 364 N GLN B 4 SHEET 3 H 4 LEU B 337 SER B 341 -1 N SER B 341 O ARG B 361 SHEET 4 H 4 GLY B 326 VAL B 331 -1 N THR B 327 O MET B 340 SHEET 1 I 4 ALA B 30 ASP B 34 0 SHEET 2 I 4 LYS B 39 ALA B 43 -1 O LYS B 39 N ASP B 34 SHEET 3 I 4 LEU B 55 ASP B 59 -1 O VAL B 58 N LEU B 40 SHEET 4 I 4 ASN B 75 LYS B 76 -1 O ASN B 75 N GLU B 57 SHEET 1 J 4 ILE B 89 ILE B 94 0 SHEET 2 J 4 ARG B 99 ASP B 104 -1 O TRP B 101 N VAL B 93 SHEET 3 J 4 ALA B 124 ASP B 129 -1 O TYR B 128 N LEU B 100 SHEET 4 J 4 GLU B 137 TYR B 142 -1 O VAL B 138 N ALA B 127 SHEET 1 K 4 PHE B 154 VAL B 161 0 SHEET 2 K 4 THR B 171 ASN B 177 -1 O PHE B 172 N ASP B 160 SHEET 3 K 4 ALA B 182 ASP B 187 -1 O PHE B 184 N ILE B 175 SHEET 4 K 4 ASP B 192 THR B 197 -1 O VAL B 196 N LEU B 183 SHEET 1 L 2 THR B 207 TYR B 211 0 SHEET 2 L 2 LYS B 214 PHE B 218 -1 O TYR B 216 N PHE B 209 SHEET 1 M 4 ILE B 222 LEU B 227 0 SHEET 2 M 4 PRO B 237 ALA B 242 -1 O TYR B 239 N THR B 226 SHEET 3 M 4 LYS B 247 ASN B 252 -1 O VAL B 251 N ALA B 238 SHEET 4 M 4 GLU B 266 ASN B 270 -1 O GLU B 266 N SER B 250 SHEET 1 N 4 ALA B 277 ASP B 283 0 SHEET 2 N 4 VAL B 288 GLU B 293 -1 O VAL B 288 N ASP B 283 SHEET 3 N 4 GLN B 298 ASN B 303 -1 O SER B 300 N PHE B 291 SHEET 4 N 4 ASP B 315 THR B 319 -1 O VAL B 317 N VAL B 299 SSBOND 1 CYS A 97 CYS A 168 1555 1555 2.06 SSBOND 2 CYS A 301 CYS A 377 1555 1555 2.08 SSBOND 3 CYS B 97 CYS B 168 1555 1555 2.07 SSBOND 4 CYS B 301 CYS B 377 1555 1555 2.10 CISPEP 1 PRO A 133 ASN A 134 0 -7.99 CISPEP 2 PHE A 223 GLY A 224 0 -13.63 CISPEP 3 LEU A 268 GLY A 269 0 7.50 CISPEP 4 MET A 307 PRO A 308 0 0.18 CISPEP 5 MET A 379 ASN A 380 0 -12.77 CISPEP 6 ARG B 113 GLY B 114 0 -21.98 CISPEP 7 PRO B 133 ASN B 134 0 -8.68 CISPEP 8 LEU B 268 GLY B 269 0 14.56 CISPEP 9 MET B 307 PRO B 308 0 -3.72 CISPEP 10 MET B 379 ASN B 380 0 -12.56 SITE 1 AC1 4 VAL A 148 LYS A 150 ASN B 270 ARG B 310 SITE 1 AC2 1 ARG A 310 SITE 1 AC3 8 THR B 29 TYR B 90 GLN B 91 PHE B 154 SITE 2 AC3 8 PHE B 325 THR B 327 ASN B 342 PHE B 344 SITE 1 AC4 11 THR A 29 TYR A 90 GLN A 91 GLY A 155 SITE 2 AC4 11 PHE A 223 ILE A 278 PHE A 325 THR A 327 SITE 3 AC4 11 ASN A 342 PHE A 344 HOH A 414 CRYST1 120.012 120.012 244.747 90.00 90.00 120.00 P 62 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008333 0.004811 0.000000 0.00000 SCALE2 0.000000 0.009622 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004086 0.00000