HEADER TRANSFERASE 04-JAN-11 3Q79 TITLE CRYPTOCOCCUS NEOFORMANS PROTEIN FARNESYLTRANSFERASE IN COMPLEX WITH TITLE 2 FARNESYL-DDPTASACNIQ PRODUCT COMPND MOL_ID: 1; COMPND 2 MOLECULE: FARNESYLTRANSFERASE ALPHA SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: FARNESYLTRANSFERASE BETA SUBUNIT; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: ISOPRENYLATED PRODUCT; COMPND 11 CHAIN: P; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRYPTOCOCCUS NEOFORMANS; SOURCE 3 ORGANISM_TAXID: 235443; SOURCE 4 STRAIN: H99; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: CRYPTOCOCCUS NEOFORMANS; SOURCE 9 ORGANISM_TAXID: 235443; SOURCE 10 STRAIN: H99; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 OTHER_DETAILS: SYNTHETIC SUBSTRATE KEYWDS PROTEIN PRENYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.A.HAST,L.S.BEESE REVDAT 2 19-OCT-11 3Q79 1 JRNL REVDAT 1 03-AUG-11 3Q79 0 JRNL AUTH M.A.HAST,C.B.NICHOLS,S.M.ARMSTRONG,S.M.KELLY,H.W.HELLINGA, JRNL AUTH 2 J.A.ALSPAUGH,L.S.BEESE JRNL TITL STRUCTURES OF CRYPTOCOCCUS NEOFORMANS PROTEIN JRNL TITL 2 FARNESYLTRANSFERASE REVEAL STRATEGIES FOR DEVELOPING JRNL TITL 3 INHIBITORS THAT TARGET FUNGAL PATHOGENS. JRNL REF J.BIOL.CHEM. V. 286 35149 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 21816822 JRNL DOI 10.1074/JBC.M111.250506 REMARK 2 REMARK 2 RESOLUTION. 2.51 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.1_336) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.51 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.95 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 44748 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2239 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.9624 - 5.3969 1.00 4656 246 0.1650 0.1797 REMARK 3 2 5.3969 - 4.2845 1.00 4442 233 0.1415 0.1738 REMARK 3 3 4.2845 - 3.7432 0.96 4220 223 0.2034 0.2744 REMARK 3 4 3.7432 - 3.4010 0.91 3995 210 0.2701 0.3021 REMARK 3 5 3.4010 - 3.1573 0.99 4321 227 0.2195 0.2535 REMARK 3 6 3.1573 - 2.9712 1.00 4358 230 0.1967 0.2562 REMARK 3 7 2.9712 - 2.8224 1.00 4328 228 0.1938 0.2511 REMARK 3 8 2.8224 - 2.6996 1.00 4300 226 0.2139 0.2936 REMARK 3 9 2.6996 - 2.5956 0.95 4104 216 0.2815 0.3812 REMARK 3 10 2.5956 - 2.5061 0.88 3785 200 0.2694 0.3484 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 40.64 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.370 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.52550 REMARK 3 B22 (A**2) : 6.52550 REMARK 3 B33 (A**2) : -13.05110 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 6626 REMARK 3 ANGLE : 0.737 9004 REMARK 3 CHIRALITY : 0.046 958 REMARK 3 PLANARITY : 0.005 1159 REMARK 3 DIHEDRAL : 14.296 2463 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: all REMARK 3 ORIGIN FOR THE GROUP (A): 28.3434 -31.4456 -2.6667 REMARK 3 T TENSOR REMARK 3 T11: 0.0539 T22: 0.0213 REMARK 3 T33: 0.0363 T12: -0.0511 REMARK 3 T13: -0.0089 T23: -0.0130 REMARK 3 L TENSOR REMARK 3 L11: 0.0671 L22: 0.0403 REMARK 3 L33: 0.2350 L12: 0.0022 REMARK 3 L13: -0.0046 L23: -0.0965 REMARK 3 S TENSOR REMARK 3 S11: 0.0000 S12: -0.0067 S13: -0.0105 REMARK 3 S21: -0.0198 S22: 0.0007 S23: -0.0014 REMARK 3 S31: 0.0088 S32: 0.0056 S33: -0.0037 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3Q79 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JAN-11. REMARK 100 THE RCSB ID CODE IS RCSB063282. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-APR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 12.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44750 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 66.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 4K, 100MM CAPSO PH 9.5, 100MM REMARK 280 NACL, 150MM LITHIUM SULFATE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.06500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 70.95000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 70.95000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 97.59750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 70.95000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 70.95000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 32.53250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 70.95000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 70.95000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 97.59750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 70.95000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 70.95000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 32.53250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 65.06500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -96.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2228 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -13 REMARK 465 GLY A -12 REMARK 465 SER A -11 REMARK 465 SER A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 SER A -3 REMARK 465 GLN A -2 REMARK 465 ASP A -1 REMARK 465 LEU A 0 REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 THR A 3 REMARK 465 SER A 4 REMARK 465 SER A 258 REMARK 465 LYS A 259 REMARK 465 LEU A 260 REMARK 465 ASN A 261 REMARK 465 PRO A 262 REMARK 465 ASP A 263 REMARK 465 ILE A 264 REMARK 465 GLU A 265 REMARK 465 THR A 266 REMARK 465 VAL A 267 REMARK 465 GLU A 268 REMARK 465 ALA A 269 REMARK 465 PHE A 270 REMARK 465 GLY A 271 REMARK 465 ASP A 277 REMARK 465 PRO A 278 REMARK 465 GLU A 335 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 THR B 3 REMARK 465 VAL B 51 REMARK 465 SER B 52 REMARK 465 SER B 73 REMARK 465 SER B 243 REMARK 465 VAL B 244 REMARK 465 VAL B 245 REMARK 465 PRO B 246 REMARK 465 SER B 247 REMARK 465 THR B 248 REMARK 465 SER B 249 REMARK 465 ALA B 250 REMARK 465 PHE B 251 REMARK 465 PRO B 252 REMARK 465 THR B 253 REMARK 465 SER B 254 REMARK 465 LYS B 350 REMARK 465 LYS B 351 REMARK 465 SER B 352 REMARK 465 ARG B 353 REMARK 465 ILE B 354 REMARK 465 GLU B 355 REMARK 465 VAL B 356 REMARK 465 PHE B 357 REMARK 465 GLU B 358 REMARK 465 GLU B 359 REMARK 465 GLU B 360 REMARK 465 LYS B 361 REMARK 465 GLU B 362 REMARK 465 GLY B 363 REMARK 465 ASP B 364 REMARK 465 TRP B 365 REMARK 465 GLU B 366 REMARK 465 ASP B 367 REMARK 465 VAL B 368 REMARK 465 PRO B 369 REMARK 465 PRO B 370 REMARK 465 ASN B 520 REMARK 465 ASP P 1999 REMARK 465 ASP P 2000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 242 CA - N - CD ANGL. DEV. = -12.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 24 77.52 -118.36 REMARK 500 VAL A 31 49.67 36.50 REMARK 500 LEU A 106 -67.79 70.32 REMARK 500 VAL A 198 -61.34 -124.31 REMARK 500 SER A 207 0.44 -65.57 REMARK 500 GLU A 317 -59.02 -127.82 REMARK 500 ASP A 319 64.17 -152.65 REMARK 500 PHE B 75 -76.91 -124.30 REMARK 500 SER B 135 -30.78 -135.83 REMARK 500 ASN B 219 -12.32 66.71 REMARK 500 ALA B 263 -173.88 -172.43 REMARK 500 SER B 394 -129.46 -122.97 REMARK 500 VAL B 500 -54.81 78.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 521 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 323 OD2 REMARK 620 2 HIS B 410 NE2 127.6 REMARK 620 3 ASP B 323 OD1 62.9 94.0 REMARK 620 4 CYS B 325 SG 110.6 115.6 89.2 REMARK 620 5 CYS P2006 SG 89.6 98.1 151.6 108.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAR B 2010 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 521 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 522 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3CX B 523 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3CX B 524 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3CX B 525 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3Q73 RELATED DB: PDB REMARK 900 RELATED ID: 3Q75 RELATED DB: PDB REMARK 900 RELATED ID: 3Q78 RELATED DB: PDB REMARK 900 RELATED ID: 3Q7A RELATED DB: PDB REMARK 900 RELATED ID: 3Q7F RELATED DB: PDB REMARK 900 RELATED ID: 3SFX RELATED DB: PDB REMARK 900 RELATED ID: 3SFY RELATED DB: PDB REMARK 999 REMARK 999 THERE IS NO UNIPORT DATABASE REFERENCE SEQUENCE AVAILABLE AT THE REMARK 999 TIME OF THE DEPOSITION. THE SEQUENCES PRESENTED HERE ARE OF REMARK 999 FARNESYLTRANSFERASE ALPHA SUBUNIT(RESIDUES 15-349) AND BETA SUBUNIT REMARK 999 FROM CRYPTOCOCCUS NEOFORMANS VAR. GRUBII STRAIN H99. THE FIRST 14 REMARK 999 RESIDUES IN THE ALPHA SUBUNIT(CHAIN A) REPRESENT EXPRESSION TAG. DBREF 3Q79 A -13 335 PDB 3Q79 3Q79 -13 335 DBREF 3Q79 B 1 520 PDB 3Q79 3Q79 1 520 DBREF 3Q79 P 1999 2009 PDB 3Q79 3Q79 1999 2009 SEQRES 1 A 349 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP SEQRES 2 A 349 LEU MET VAL THR SER THR TYR ILE PRO MET SER GLN ARG SEQRES 3 A 349 ARG SER TRP ALA ASP VAL LYS PRO ILE MET GLN ASP ASP SEQRES 4 A 349 GLY PRO ASN PRO VAL VAL PRO ILE MET TYR SER GLU GLU SEQRES 5 A 349 TYR LYS ASP ALA MET ASP TYR PHE ARG ALA ILE ALA ALA SEQRES 6 A 349 LYS GLU GLU LYS SER GLU ARG ALA LEU GLU LEU THR GLU SEQRES 7 A 349 ILE ILE VAL ARG MET ASN PRO ALA HIS TYR THR VAL TRP SEQRES 8 A 349 GLN TYR ARG PHE SER LEU LEU THR SER LEU ASN LYS SER SEQRES 9 A 349 LEU GLU ASP GLU LEU ARG LEU MET ASN GLU PHE ALA VAL SEQRES 10 A 349 GLN ASN LEU LYS SER TYR GLN VAL TRP HIS HIS ARG LEU SEQRES 11 A 349 LEU LEU LEU ASP ARG ILE SER PRO GLN ASP PRO VAL SER SEQRES 12 A 349 GLU ILE GLU TYR ILE HIS GLY SER LEU LEU PRO ASP PRO SEQRES 13 A 349 LYS ASN TYR HIS THR TRP ALA TYR LEU HIS TRP LEU TYR SEQRES 14 A 349 SER HIS PHE SER THR LEU GLY ARG ILE SER GLU ALA GLN SEQRES 15 A 349 TRP GLY SER GLU LEU ASP TRP CYS ASN GLU MET LEU ARG SEQRES 16 A 349 VAL ASP GLY ARG ASN ASN SER ALA TRP GLY TRP ARG TRP SEQRES 17 A 349 TYR LEU ARG VAL SER ARG PRO GLY ALA GLU THR SER SER SEQRES 18 A 349 ARG SER LEU GLN ASP GLU LEU ILE TYR ILE LEU LYS SER SEQRES 19 A 349 ILE HIS LEU ILE PRO HIS ASN VAL SER ALA TRP ASN TYR SEQRES 20 A 349 LEU ARG GLY PHE LEU LYS HIS PHE SER LEU PRO LEU VAL SEQRES 21 A 349 PRO ILE LEU PRO ALA ILE LEU PRO TYR THR ALA SER LYS SEQRES 22 A 349 LEU ASN PRO ASP ILE GLU THR VAL GLU ALA PHE GLY PHE SEQRES 23 A 349 PRO MET PRO SER ASP PRO LEU PRO GLU ASP THR PRO LEU SEQRES 24 A 349 PRO VAL PRO LEU ALA LEU GLU TYR LEU ALA ASP SER PHE SEQRES 25 A 349 ILE GLU GLN ASN ARG VAL ASP ASP ALA ALA LYS VAL PHE SEQRES 26 A 349 GLU LYS LEU SER SER GLU TYR ASP GLN MET ARG ALA GLY SEQRES 27 A 349 TYR TRP GLU PHE ARG ARG ARG GLU CYS ALA GLU SEQRES 1 B 520 MET ALA THR GLU PHE THR PRO SER VAL TYR SER LEU VAL SEQRES 2 B 520 SER LYS PRO LEU PRO SER ASN SER ARG PRO SER ALA THR SEQRES 3 B 520 LEU ASP GLU GLN ALA GLU THR GLU ASP LEU ILE SER GLN SEQRES 4 B 520 LEU PHE ASP LEU THR ALA ASP PRO ASN ALA LEU VAL SER SEQRES 5 B 520 GLU HIS GLY LYS ARG TYR SER GLY LEU ARG LYS GLN GLU SEQRES 6 B 520 HIS THR GLN PHE LEU ALA SER SER PHE PHE GLN LEU PRO SEQRES 7 B 520 GLY LYS PHE VAL SER LEU ASP ALA SER ARG PRO TRP LEU SEQRES 8 B 520 VAL PHE TRP THR VAL HIS SER LEU ASP LEU LEU GLY VAL SEQRES 9 B 520 ALA LEU ASP GLN GLY THR LYS ASP ARG VAL VAL SER THR SEQRES 10 B 520 LEU LEU HIS PHE LEU SER PRO LYS GLY GLY PHE GLY GLY SEQRES 11 B 520 GLY PRO ALA ASN SER GLN ILE PRO HIS LEU LEU PRO THR SEQRES 12 B 520 TYR ALA SER VAL CYS SER LEU ALA ILE ALA GLY ASN ASP SEQRES 13 B 520 SER SER THR GLY GLY TRP LYS ASP LEU ALA ALA ALA ARG SEQRES 14 B 520 GLN SER ILE TYR GLU PHE PHE MET ARG CYS LYS ARG PRO SEQRES 15 B 520 ASP GLY GLY PHE VAL VAL CYS GLU GLY GLY GLU VAL ASP SEQRES 16 B 520 VAL ARG GLY THR TYR CYS LEU LEU VAL VAL ALA THR LEU SEQRES 17 B 520 LEU ASP ILE ILE THR PRO GLU LEU LEU HIS ASN VAL ASP SEQRES 18 B 520 LYS PHE VAL SER ALA CYS GLN THR TYR GLU GLY GLY PHE SEQRES 19 B 520 ALA CYS ALA SER PHE PRO PHE PRO SER VAL VAL PRO SER SEQRES 20 B 520 THR SER ALA PHE PRO THR SER GLU PRO SER CYS ARG VAL SEQRES 21 B 520 SER MET ALA GLU ALA HIS GLY GLY TYR THR SER CYS SER SEQRES 22 B 520 LEU ASN SER HIS PHE LEU LEU THR SER VAL PRO LEU PRO SEQRES 23 B 520 SER PHE PRO LEU SER ILE ASP ALA ASN ALA ALA LEU ARG SEQRES 24 B 520 TRP THR VAL LEU GLN GLN GLY GLU PRO ILE GLU GLY GLY SEQRES 25 B 520 GLY PHE ARG GLY ARG THR ASN LYS LEU VAL ASP GLY CYS SEQRES 26 B 520 TYR SER TRP TRP VAL GLY GLY GLY ALA PRO VAL ALA GLU SEQRES 27 B 520 GLU LEU VAL ARG ARG GLU LYS SER ARG LYS VAL LYS LYS SEQRES 28 B 520 SER ARG ILE GLU VAL PHE GLU GLU GLU LYS GLU GLY ASP SEQRES 29 B 520 TRP GLU ASP VAL PRO PRO ILE PRO PRO ILE PHE ASN ARG SEQRES 30 B 520 VAL ALA LEU GLN GLU PHE THR LEU VAL ALA ALA GLN GLN SEQRES 31 B 520 ASP PRO GLY SER THR GLY GLY LEU ARG ASP LYS PRO GLY SEQRES 32 B 520 LYS ARG PRO ASP GLN TYR HIS THR CYS ASN ASN LEU SER SEQRES 33 B 520 GLY LEU SER ILE ALA GLN HIS LYS MET SER HIS SER PRO SEQRES 34 B 520 SER THR VAL SER SER ASN ARG LEU LYS PHE ASP ALA SER SEQRES 35 B 520 LYS GLY LEU PRO ALA VAL LYS PRO VAL ALA PRO GLY GLY SEQRES 36 B 520 GLY TRP LYS ASN GLU ASP GLU ARG GLN ASN ALA ARG ARG SEQRES 37 B 520 GLU ILE TRP ALA ASN ALA LEU GLY TRP ILE GLU GLU GLU SEQRES 38 B 520 GLY GLY GLU ILE ILE VAL GLY GLY LYS ASP ASN ARG ILE SEQRES 39 B 520 ASN THR THR THR PRO VAL PHE ASN ILE LEU GLY LEU ARG SEQRES 40 B 520 LEU LYS PRO PHE ILE ASN TYR PHE TYR CYS GLN GLU ASN SEQRES 1 P 11 ASP ASP PRO THR ALA SER ALA CYS ASN ILE GLN HET ZN B 521 1 HET FAR B2010 15 HET SO4 B 522 5 HET 3CX B 523 15 HET 3CX B 524 15 HET 3CX B 525 15 HETNAM ZN ZINC ION HETNAM FAR FARNESYL HETNAM SO4 SULFATE ION HETNAM 3CX (2S)-3-(CYCLOHEXYLAMINO)-2-HYDROXYPROPANE-1-SULFONIC HETNAM 2 3CX ACID FORMUL 4 ZN ZN 2+ FORMUL 5 FAR C15 H26 FORMUL 6 SO4 O4 S 2- FORMUL 7 3CX 3(C9 H19 N O4 S) FORMUL 10 HOH *383(H2 O) HELIX 1 1 PRO A 8 ALA A 16 5 9 HELIX 2 2 SER A 36 GLU A 53 1 18 HELIX 3 3 SER A 56 ASN A 70 1 15 HELIX 4 4 HIS A 73 LEU A 87 1 15 HELIX 5 5 SER A 90 ASN A 105 1 16 HELIX 6 6 SER A 108 SER A 123 1 16 HELIX 7 7 PRO A 127 LEU A 138 1 12 HELIX 8 8 ASN A 144 LEU A 161 1 18 HELIX 9 9 SER A 165 ASP A 183 1 19 HELIX 10 10 ASN A 186 VAL A 198 1 13 HELIX 11 11 ARG A 208 ILE A 224 1 17 HELIX 12 12 ASN A 227 PHE A 241 1 15 HELIX 13 13 LEU A 245 ALA A 257 5 13 HELIX 14 14 VAL A 287 GLN A 301 1 15 HELIX 15 15 ARG A 303 GLU A 317 1 15 HELIX 16 16 ASP A 319 MET A 321 5 3 HELIX 17 17 ARG A 322 ALA A 334 1 13 HELIX 18 18 SER B 8 LEU B 12 5 5 HELIX 19 19 SER B 24 THR B 44 1 21 HELIX 20 20 ARG B 62 SER B 72 1 11 HELIX 21 21 PRO B 78 ASP B 85 5 8 HELIX 22 22 SER B 87 LEU B 102 1 16 HELIX 23 23 ASP B 107 HIS B 120 1 14 HELIX 24 24 HIS B 139 GLY B 154 1 16 HELIX 25 25 GLY B 161 ALA B 168 1 8 HELIX 26 26 ALA B 168 LYS B 180 1 13 HELIX 27 27 ASP B 195 ASP B 210 1 16 HELIX 28 28 THR B 213 HIS B 218 1 6 HELIX 29 29 ASN B 219 ALA B 226 1 8 HELIX 30 30 HIS B 266 THR B 281 1 16 HELIX 31 31 ASP B 293 GLN B 304 1 12 HELIX 32 32 GLU B 307 GLY B 311 5 5 HELIX 33 33 CYS B 325 VAL B 330 1 6 HELIX 34 34 GLY B 333 VAL B 349 1 17 HELIX 35 35 ASN B 376 ALA B 387 1 12 HELIX 36 36 ASP B 407 HIS B 423 1 17 HELIX 37 37 SER B 428 PHE B 439 1 12 HELIX 38 38 ALA B 452 GLY B 456 5 5 HELIX 39 39 ASN B 459 LEU B 475 1 17 HELIX 40 40 GLY B 489 ARG B 493 5 5 HELIX 41 41 LEU B 504 TYR B 516 1 13 SHEET 1 A 2 SER B 238 PHE B 241 0 SHEET 2 A 2 CYS B 258 SER B 261 -1 O VAL B 260 N PHE B 239 SHEET 1 B 2 MET B 425 HIS B 427 0 SHEET 2 B 2 TRP B 477 GLU B 479 -1 O ILE B 478 N SER B 426 LINK OD2 ASP B 323 ZN ZN B 521 1555 1555 2.04 LINK NE2 HIS B 410 ZN ZN B 521 1555 1555 2.05 LINK OD1 ASP B 323 ZN ZN B 521 1555 1555 2.11 LINK SG CYS B 325 ZN ZN B 521 1555 1555 2.25 LINK SG CYS P2006 ZN ZN B 521 1555 1555 2.43 LINK SG CYS P2006 C1 FAR B2010 1555 1555 1.85 CISPEP 1 LEU A 285 PRO A 286 0 3.19 CISPEP 2 PHE B 288 PRO B 289 0 0.00 SITE 1 AC1 14 TYR A 109 TYR B 200 HIS B 266 GLY B 268 SITE 2 AC1 14 CYS B 272 ASP B 323 CYS B 325 TYR B 326 SITE 3 AC1 14 TRP B 329 TYR B 409 ZN B 521 SO4 B 522 SITE 4 AC1 14 CYS P2006 ILE P2008 SITE 1 AC2 5 ASP B 323 CYS B 325 HIS B 410 FAR B2010 SITE 2 AC2 5 CYS P2006 SITE 1 AC3 6 ARG B 317 LYS B 320 TYR B 326 FAR B2010 SITE 2 AC3 6 HOH B2121 HOH B2130 SITE 1 AC4 9 TYR B 58 ASP B 100 ALA B 105 GLY B 489 SITE 2 AC4 9 LYS B 490 ASP B 491 ARG B 493 ASN B 495 SITE 3 AC4 9 HOH B1774 SITE 1 AC5 6 ARG B 62 LYS B 63 GLN B 64 GLU B 65 SITE 2 AC5 6 PHE B 74 LEU B 99 SITE 1 AC6 7 ALA A 50 SER B 123 PRO B 124 LYS B 125 SITE 2 AC6 7 ALA B 133 ASN B 134 SER B 135 CRYST1 141.900 141.900 130.130 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007047 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007047 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007685 0.00000