HEADER HYDROLASE REGULATOR 05-JAN-11 3Q7V TITLE BETA-LACTAM-SENSOR DOMAIN OF BLAR1 (APO) FROM STAPHYLOCOCCUS AUREUS TITLE 2 WITH CARBOXYLATED LYS392 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE REGULATORY PROTEIN BLAR1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 332-583; COMPND 5 SYNONYM: BLA REGULATOR PROTEIN BLAR1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: BETA-LACTAMASE REGULATORY PROTEIN BLAR1; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: RESIDUES 332-583; COMPND 11 SYNONYM: BLA REGULATOR PROTEIN BLAR1; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: BLAR1, VRA0048; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 9 ORGANISM_TAXID: 1280; SOURCE 10 GENE: BLAR1, VRA0048; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ANTIBIOTIC-BINDING, MRSA, HYDROLASE REGULATOR EXPDTA X-RAY DIFFRACTION AUTHOR O.Y.BORBULEVYCH,S.MOBASHERY,B.M.BAKER REVDAT 3 09-JAN-13 3Q7V 1 JRNL VERSN REVDAT 2 06-JUL-11 3Q7V 1 HEADER REVDAT 1 29-JUN-11 3Q7V 0 JRNL AUTH O.BORBULEVYCH,M.KUMARASIRI,B.WILSON,L.I.LLARRULL,M.LEE, JRNL AUTH 2 D.HESEK,Q.SHI,J.PENG,B.M.BAKER,S.MOBASHERY JRNL TITL LYSINE NZETA-DECARBOXYLATION SWITCH AND ACTIVATION OF THE JRNL TITL 2 BETA-LACTAM SENSOR DOMAIN OF BLAR1 PROTEIN OF JRNL TITL 3 METHICILLIN-RESISTANT STAPHYLOCOCCUS AUREUS. JRNL REF J.BIOL.CHEM. V. 286 31466 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 21775440 JRNL DOI 10.1074/JBC.M111.252189 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 30158 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM, 5% REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1518 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1734 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 81.03 REMARK 3 BIN R VALUE (WORKING SET) : 0.2310 REMARK 3 BIN FREE R VALUE SET COUNT : 77 REMARK 3 BIN FREE R VALUE : 0.2820 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4175 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 44 REMARK 3 SOLVENT ATOMS : 274 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.34000 REMARK 3 B22 (A**2) : -0.99000 REMARK 3 B33 (A**2) : 0.97000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.58000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.203 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.147 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.404 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4381 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5912 ; 1.681 ; 1.938 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 522 ; 6.474 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 231 ;36.203 ;25.368 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 797 ;16.917 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;20.512 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 588 ; 0.124 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3356 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2535 ; 1.162 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4087 ; 1.873 ; 3.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1846 ; 1.390 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1816 ; 1.999 ; 3.000 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 332 A 583 REMARK 3 ORIGIN FOR THE GROUP (A): -6.3220 -0.4200 23.1500 REMARK 3 T TENSOR REMARK 3 T11: 0.0018 T22: 0.0060 REMARK 3 T33: 0.0136 T12: -0.0016 REMARK 3 T13: 0.0021 T23: -0.0037 REMARK 3 L TENSOR REMARK 3 L11: 3.7766 L22: 2.3498 REMARK 3 L33: 2.8042 L12: -0.4673 REMARK 3 L13: 0.8366 L23: 0.0967 REMARK 3 S TENSOR REMARK 3 S11: 0.0252 S12: -0.0363 S13: 0.0662 REMARK 3 S21: 0.0468 S22: -0.0093 S23: 0.0542 REMARK 3 S31: 0.0167 S32: 0.0656 S33: -0.0158 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 253 REMARK 3 ORIGIN FOR THE GROUP (A): -17.7390 -25.0570 -1.0970 REMARK 3 T TENSOR REMARK 3 T11: 0.0888 T22: 0.0305 REMARK 3 T33: 0.0647 T12: 0.0058 REMARK 3 T13: -0.0338 T23: -0.0011 REMARK 3 L TENSOR REMARK 3 L11: 2.2554 L22: 2.5671 REMARK 3 L33: 4.6731 L12: 0.1050 REMARK 3 L13: -0.1422 L23: -0.7617 REMARK 3 S TENSOR REMARK 3 S11: -0.0401 S12: 0.1515 S13: -0.1166 REMARK 3 S21: -0.0867 S22: -0.0738 S23: -0.0283 REMARK 3 S31: 0.1644 S32: 0.1490 S33: 0.1139 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 3Q7V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JUN-11. REMARK 100 THE RCSB ID CODE IS RCSB063304. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : SI111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30186 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.10900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.54800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG4000 30%, TRIS 0.1M, NH4SSO4 0.2M, REMARK 280 PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 53.71500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 258 O HOH A 354 1.66 REMARK 500 O HOH A 350 O HOH A 375 2.07 REMARK 500 O HOH A 343 O HOH A 360 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 14 40.22 -92.87 REMARK 500 ASN A 47 72.40 60.20 REMARK 500 ASN A 58 -131.81 46.73 REMARK 500 ASN A 95 45.75 -91.18 REMARK 500 LYS A 142 -105.25 -107.15 REMARK 500 SER A 143 60.99 -101.13 REMARK 500 ASP A 148 -136.37 -147.60 REMARK 500 ASN A 169 -158.04 -114.06 REMARK 500 ASN A 208 110.99 -163.01 REMARK 500 ASN B 47 67.64 61.38 REMARK 500 ASN B 58 -129.46 44.96 REMARK 500 ASN B 95 45.72 -94.39 REMARK 500 ASP B 99 -168.82 -110.56 REMARK 500 LYS B 142 -107.79 -105.16 REMARK 500 GLU B 147 52.26 39.32 REMARK 500 ASP B 148 -135.81 -135.12 REMARK 500 ASN B 168 45.34 -81.67 REMARK 500 ASN B 169 -153.06 -78.40 REMARK 500 ASN B 188 -158.46 -129.90 REMARK 500 ASN B 208 113.78 -160.57 REMARK 500 THR B 217 -166.22 -113.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ASN B 253 24.7 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 410 DISTANCE = 5.07 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 254 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 254 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 255 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 255 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 256 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 256 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1XA1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE SENSOR DOMAIN OF BLAR1 FROM REMARK 900 STAPHYLOCOCCUS AUREUS IN ITS APO FORM REMARK 900 RELATED ID: 3Q7Z RELATED DB: PDB REMARK 900 RELATED ID: 3Q81 RELATED DB: PDB REMARK 900 RELATED ID: 3Q82 RELATED DB: PDB DBREF 3Q7V A 2 253 UNP Q7WU28 Q7WU28_STAAU 332 583 DBREF 3Q7V B 2 253 UNP Q7WU28 Q7WU28_STAAU 332 583 SEQADV 3Q7V ALA A 39 UNP Q7WU28 LYS 369 ENGINEERED MUTATION SEQADV 3Q7V ALA A 40 UNP Q7WU28 LYS 370 ENGINEERED MUTATION SEQADV 3Q7V ALA A 42 UNP Q7WU28 LYS 372 ENGINEERED MUTATION SEQADV 3Q7V ALA B 39 UNP Q7WU28 LYS 369 ENGINEERED MUTATION SEQADV 3Q7V ALA B 40 UNP Q7WU28 LYS 370 ENGINEERED MUTATION SEQADV 3Q7V ALA B 42 UNP Q7WU28 LYS 372 ENGINEERED MUTATION SEQRES 1 A 252 GLN SER ILE THR ASP TYR ASN TYR LYS LYS PRO LEU HIS SEQRES 2 A 252 ASN ASP TYR GLN ILE LEU ASP LYS SER LYS ILE PHE GLY SEQRES 3 A 252 SER ASN SER GLY SER PHE VAL MET TYR SER MET ALA ALA SEQRES 4 A 252 ASP ALA TYR TYR ILE TYR ASN GLU LYS GLU SER ARG LYS SEQRES 5 A 252 ARG TYR SER PRO ASN SER THR TYR LYS ILE TYR LEU ALA SEQRES 6 A 252 MET PHE GLY LEU ASP ARG HIS ILE ILE ASN ASP GLU ASN SEQRES 7 A 252 SER ARG MET SER TRP ASN HIS LYS HIS TYR PRO PHE ASP SEQRES 8 A 252 ALA TRP ASN LYS GLU GLN ASP LEU ASN THR ALA MET GLN SEQRES 9 A 252 ASN SER VAL ASN TRP TYR PHE GLU ARG ILE SER ASP GLN SEQRES 10 A 252 ILE PRO LYS ASN TYR THR ALA THR GLN LEU LYS GLN LEU SEQRES 11 A 252 ASN TYR GLY ASN LYS ASN LEU GLY SER TYR LYS SER TYR SEQRES 12 A 252 TRP MET GLU ASP SER LEU LYS ILE SER ASN LEU GLU GLN SEQRES 13 A 252 VAL ILE VAL PHE LYS ASN MET MET GLU GLN ASN ASN HIS SEQRES 14 A 252 PHE SER LYS LYS ALA LYS ASN GLN LEU SER SER SER LEU SEQRES 15 A 252 LEU ILE LYS LYS ASN GLU LYS TYR GLU LEU TYR GLY LYS SEQRES 16 A 252 THR GLY THR GLY ILE VAL ASN GLY LYS TYR ASN ASN GLY SEQRES 17 A 252 TRP PHE VAL GLY TYR VAL ILE THR ASN HIS ASP LYS TYR SEQRES 18 A 252 TYR PHE ALA THR HIS LEU SER ASP GLY LYS PRO SER GLY SEQRES 19 A 252 LYS ASN ALA GLU LEU ILE SER GLU LYS ILE LEU LYS GLU SEQRES 20 A 252 MET GLY VAL LEU ASN SEQRES 1 B 252 GLN SER ILE THR ASP TYR ASN TYR LYS LYS PRO LEU HIS SEQRES 2 B 252 ASN ASP TYR GLN ILE LEU ASP LYS SER LYS ILE PHE GLY SEQRES 3 B 252 SER ASN SER GLY SER PHE VAL MET TYR SER MET ALA ALA SEQRES 4 B 252 ASP ALA TYR TYR ILE TYR ASN GLU LYS GLU SER ARG LYS SEQRES 5 B 252 ARG TYR SER PRO ASN SER THR TYR KCX ILE TYR LEU ALA SEQRES 6 B 252 MET PHE GLY LEU ASP ARG HIS ILE ILE ASN ASP GLU ASN SEQRES 7 B 252 SER ARG MET SER TRP ASN HIS LYS HIS TYR PRO PHE ASP SEQRES 8 B 252 ALA TRP ASN LYS GLU GLN ASP LEU ASN THR ALA MET GLN SEQRES 9 B 252 ASN SER VAL ASN TRP TYR PHE GLU ARG ILE SER ASP GLN SEQRES 10 B 252 ILE PRO LYS ASN TYR THR ALA THR GLN LEU LYS GLN LEU SEQRES 11 B 252 ASN TYR GLY ASN LYS ASN LEU GLY SER TYR LYS SER TYR SEQRES 12 B 252 TRP MET GLU ASP SER LEU LYS ILE SER ASN LEU GLU GLN SEQRES 13 B 252 VAL ILE VAL PHE LYS ASN MET MET GLU GLN ASN ASN HIS SEQRES 14 B 252 PHE SER LYS LYS ALA LYS ASN GLN LEU SER SER SER LEU SEQRES 15 B 252 LEU ILE LYS LYS ASN GLU LYS TYR GLU LEU TYR GLY LYS SEQRES 16 B 252 THR GLY THR GLY ILE VAL ASN GLY LYS TYR ASN ASN GLY SEQRES 17 B 252 TRP PHE VAL GLY TYR VAL ILE THR ASN HIS ASP LYS TYR SEQRES 18 B 252 TYR PHE ALA THR HIS LEU SER ASP GLY LYS PRO SER GLY SEQRES 19 B 252 LYS ASN ALA GLU LEU ILE SER GLU LYS ILE LEU LYS GLU SEQRES 20 B 252 MET GLY VAL LEU ASN MODRES 3Q7V KCX B 62 LYS LYSINE NZ-CARBOXYLIC ACID HET KCX B 62 12 HET SO4 A 254 5 HET SO4 A 255 5 HET GOL A 1 6 HET GOL A 256 6 HET SO4 B 1 5 HET SO4 B 254 5 HET GOL B 255 6 HET GOL B 256 6 HETNAM KCX LYSINE NZ-CARBOXYLIC ACID HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 KCX C7 H14 N2 O4 FORMUL 3 SO4 4(O4 S 2-) FORMUL 5 GOL 4(C3 H8 O3) FORMUL 11 HOH *274(H2 O) HELIX 1 1 LYS A 22 GLY A 27 1 6 HELIX 2 2 LYS A 49 ARG A 52 5 4 HELIX 3 3 PRO A 57 THR A 60 5 4 HELIX 4 4 TYR A 61 ARG A 72 1 12 HELIX 5 5 PHE A 91 ASN A 95 5 5 HELIX 6 6 ASP A 99 SER A 107 1 9 HELIX 7 7 VAL A 108 GLN A 118 1 11 HELIX 8 8 PRO A 120 ASN A 132 1 13 HELIX 9 9 ASN A 154 GLN A 167 1 14 HELIX 10 10 SER A 172 LEU A 183 1 12 HELIX 11 11 SER A 234 MET A 249 1 16 HELIX 12 12 LYS B 22 GLY B 27 1 6 HELIX 13 13 LYS B 49 ARG B 52 5 4 HELIX 14 14 PRO B 57 THR B 60 5 4 HELIX 15 15 TYR B 61 ARG B 72 1 12 HELIX 16 16 PHE B 91 ASN B 95 5 5 HELIX 17 17 ASP B 99 ASN B 106 1 8 HELIX 18 18 VAL B 108 GLN B 118 1 11 HELIX 19 19 PRO B 120 ASN B 132 1 13 HELIX 20 20 ASN B 154 GLN B 167 1 14 HELIX 21 21 SER B 172 LEU B 183 1 12 HELIX 22 22 SER B 234 MET B 249 1 16 SHEET 1 A 7 ASP A 16 ILE A 19 0 SHEET 2 A 7 ALA A 42 TYR A 46 1 O ILE A 45 N GLN A 18 SHEET 3 A 7 SER A 30 SER A 37 -1 N PHE A 33 O TYR A 46 SHEET 4 A 7 LYS A 221 ASP A 230 -1 O TYR A 223 N TYR A 36 SHEET 5 A 7 LYS A 205 THR A 217 -1 N GLY A 213 O PHE A 224 SHEET 6 A 7 TYR A 191 VAL A 202 -1 N TYR A 194 O TYR A 214 SHEET 7 A 7 LEU A 184 LYS A 187 -1 N ILE A 185 O LEU A 193 SHEET 1 B 2 ARG A 54 TYR A 55 0 SHEET 2 B 2 ILE A 152 SER A 153 -1 O ILE A 152 N TYR A 55 SHEET 1 C 7 ASP B 16 LEU B 20 0 SHEET 2 C 7 ALA B 42 TYR B 46 1 O ILE B 45 N LEU B 20 SHEET 3 C 7 SER B 30 SER B 37 -1 N PHE B 33 O TYR B 46 SHEET 4 C 7 LYS B 221 ASP B 230 -1 O TYR B 223 N TYR B 36 SHEET 5 C 7 LYS B 205 THR B 217 -1 N GLY B 213 O PHE B 224 SHEET 6 C 7 TYR B 191 VAL B 202 -1 N VAL B 202 O LYS B 205 SHEET 7 C 7 LEU B 184 LYS B 187 -1 N ILE B 185 O LEU B 193 SHEET 1 D 2 ARG B 54 TYR B 55 0 SHEET 2 D 2 ILE B 152 SER B 153 -1 O ILE B 152 N TYR B 55 LINK C TYR B 61 N KCX B 62 1555 1555 1.34 LINK C KCX B 62 N ILE B 63 1555 1555 1.35 SITE 1 AC1 8 ASN B 58 SER B 59 SER B 107 LYS B 196 SITE 2 AC1 8 THR B 197 GLY B 198 THR B 199 HOH B 295 SITE 1 AC2 8 ASN A 58 SER A 59 SER A 107 LYS A 196 SITE 2 AC2 8 THR A 197 GLY A 198 THR A 199 HOH A 354 SITE 1 AC3 3 ARG B 72 LYS B 205 HOH B 350 SITE 1 AC4 3 ASN A 218 HIS A 219 HOH A 315 SITE 1 AC5 7 TYR A 89 TRP A 94 ASN A 109 TRP A 110 SITE 2 AC5 7 GLU A 113 LYS B 87 HOH B 344 SITE 1 AC6 3 ASN B 15 LYS B 162 ASN B 163 SITE 1 AC7 8 LYS B 187 ASN B 188 GLU B 189 TYR B 191 SITE 2 AC7 8 GLU B 192 THR B 217 ASN B 218 HOH B 370 SITE 1 AC8 7 LYS A 187 ASN A 188 LYS A 190 TYR A 191 SITE 2 AC8 7 GLU A 192 THR A 217 ASN A 218 CRYST1 46.955 107.430 56.496 90.00 108.75 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021297 0.000000 0.007227 0.00000 SCALE2 0.000000 0.009308 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018692 0.00000