HEADER TRANSFERASE 07-JAN-11 3Q8X TITLE STRUCTURE OF A TOXIN-ANTITOXIN SYSTEM BOUND TO ITS SUBSTRATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTIDOTE OF EPSILON-ZETA POSTSEGREGATIONAL KILLING SYSTEM; COMPND 3 CHAIN: A, C; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ZETA-TOXIN; COMPND 7 CHAIN: B, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PYOGENES; SOURCE 3 ORGANISM_TAXID: 1314; SOURCE 4 GENE: EPSILON; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PYOGENES; SOURCE 10 ORGANISM_TAXID: 1314; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 13 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS POLYNUCLEOTIDE KINASE FOLD, EPSILON: ANTIDOTE ZETA: BACTERIAL TOXIN, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.MUTSCHLER,M.GEBHARDT,R.L.SHOEMAN,A.MEINHART REVDAT 4 13-SEP-23 3Q8X 1 REMARK REVDAT 3 17-JUL-19 3Q8X 1 REMARK REVDAT 2 02-NOV-11 3Q8X 1 JRNL VERSN REVDAT 1 09-MAR-11 3Q8X 0 JRNL AUTH H.MUTSCHLER,M.GEBHARDT,R.L.SHOEMAN,A.MEINHART JRNL TITL A NOVEL MECHANISM OF PROGRAMMED CELL DEATH IN BACTERIA BY JRNL TITL 2 TOXIN-ANTITOXIN SYSTEMS CORRUPTS PEPTIDOGLYCAN SYNTHESIS. JRNL REF PLOS BIOL. V. 9 01033 2011 JRNL REFN ISSN 1544-9173 JRNL PMID 21445328 JRNL DOI 10.1371/JOURNAL.PBIO.1001033 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.52 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 25131 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1323 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1814 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3060 REMARK 3 BIN FREE R VALUE SET COUNT : 95 REMARK 3 BIN FREE R VALUE : 0.3680 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5767 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 49 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 76.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.24000 REMARK 3 B22 (A**2) : 0.54000 REMARK 3 B33 (A**2) : 1.70000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.016 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.348 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.286 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 31.514 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5910 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7996 ; 1.106 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 709 ; 4.838 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 289 ;37.178 ;25.571 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1118 ;16.172 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;14.828 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 914 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4375 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2603 ; 0.207 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 4098 ; 0.300 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 160 ; 0.124 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 28 ; 0.197 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 3 ; 0.178 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3655 ; 0.388 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5802 ; 0.662 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2493 ; 0.947 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2194 ; 1.590 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 87 REMARK 3 ORIGIN FOR THE GROUP (A): 4.2357 28.7183 25.4636 REMARK 3 T TENSOR REMARK 3 T11: -0.3320 T22: -0.2856 REMARK 3 T33: -0.2616 T12: -0.0152 REMARK 3 T13: -0.0324 T23: 0.0437 REMARK 3 L TENSOR REMARK 3 L11: 3.0339 L22: 8.5581 REMARK 3 L33: 5.0427 L12: 0.8813 REMARK 3 L13: -1.4568 L23: -1.7792 REMARK 3 S TENSOR REMARK 3 S11: -0.0638 S12: -0.1926 S13: -0.2829 REMARK 3 S21: 0.4071 S22: -0.0602 S23: -0.2349 REMARK 3 S31: -0.3545 S32: 0.0464 S33: 0.1241 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 274 REMARK 3 ORIGIN FOR THE GROUP (A): 12.9594 31.0727 7.4273 REMARK 3 T TENSOR REMARK 3 T11: -0.4203 T22: -0.2173 REMARK 3 T33: -0.1517 T12: 0.0068 REMARK 3 T13: -0.0111 T23: 0.0156 REMARK 3 L TENSOR REMARK 3 L11: 2.2368 L22: 1.8507 REMARK 3 L33: 2.0788 L12: 0.6044 REMARK 3 L13: -0.5634 L23: 0.5897 REMARK 3 S TENSOR REMARK 3 S11: 0.0530 S12: 0.1024 S13: -0.0989 REMARK 3 S21: 0.1440 S22: 0.0246 S23: -0.2077 REMARK 3 S31: -0.3779 S32: 0.2719 S33: -0.0776 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 2 C 86 REMARK 3 ORIGIN FOR THE GROUP (A): -4.9369 32.6133 38.7432 REMARK 3 T TENSOR REMARK 3 T11: -0.1226 T22: -0.2326 REMARK 3 T33: -0.1540 T12: 0.0226 REMARK 3 T13: 0.0279 T23: 0.0074 REMARK 3 L TENSOR REMARK 3 L11: 3.8568 L22: 4.3271 REMARK 3 L33: 10.1901 L12: -1.8121 REMARK 3 L13: 1.2766 L23: -4.3548 REMARK 3 S TENSOR REMARK 3 S11: 0.0844 S12: -0.1150 S13: -0.1055 REMARK 3 S21: 0.3829 S22: -0.1773 S23: -0.1522 REMARK 3 S31: -0.6383 S32: 0.0017 S33: 0.0928 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 2 D 272 REMARK 3 ORIGIN FOR THE GROUP (A): -12.4090 31.9977 57.3120 REMARK 3 T TENSOR REMARK 3 T11: 0.0785 T22: -0.1083 REMARK 3 T33: -0.0213 T12: 0.0253 REMARK 3 T13: 0.0656 T23: 0.0445 REMARK 3 L TENSOR REMARK 3 L11: 0.8753 L22: 2.2025 REMARK 3 L33: 5.0842 L12: 0.1085 REMARK 3 L13: -0.6848 L23: -0.6545 REMARK 3 S TENSOR REMARK 3 S11: 0.0733 S12: 0.1039 S13: 0.1872 REMARK 3 S21: 0.4531 S22: -0.0754 S23: -0.0254 REMARK 3 S31: -0.5940 S32: -0.0359 S33: 0.0021 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3Q8X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JAN-11. REMARK 100 THE DEPOSITION ID IS D_1000063342. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : FIXED-EXIT SI(111) REMARK 200 MONOMCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25432 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.04800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.4 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.54800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 1GVN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM ACETATE, 16% (W/V) REMARK 280 PEG1500 AND 7% (V/V) MPD, PH 4.8, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.90000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 97.58500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.99500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 97.58500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.90000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.99500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -65.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 LYS A 88 REMARK 465 VAL A 89 REMARK 465 ALA A 90 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 THR B 275 REMARK 465 PRO B 276 REMARK 465 PRO B 277 REMARK 465 ILE B 278 REMARK 465 PRO B 279 REMARK 465 LYS B 280 REMARK 465 THR B 281 REMARK 465 PRO B 282 REMARK 465 LYS B 283 REMARK 465 LEU B 284 REMARK 465 PRO B 285 REMARK 465 GLY B 286 REMARK 465 ILE B 287 REMARK 465 MET C 1 REMARK 465 GLU C 87 REMARK 465 LYS C 88 REMARK 465 VAL C 89 REMARK 465 ALA C 90 REMARK 465 MET D 1 REMARK 465 PRO D 273 REMARK 465 PRO D 274 REMARK 465 THR D 275 REMARK 465 PRO D 276 REMARK 465 PRO D 277 REMARK 465 ILE D 278 REMARK 465 PRO D 279 REMARK 465 LYS D 280 REMARK 465 THR D 281 REMARK 465 PRO D 282 REMARK 465 LYS D 283 REMARK 465 LEU D 284 REMARK 465 PRO D 285 REMARK 465 GLY D 286 REMARK 465 ILE D 287 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU B 84 -127.61 45.61 REMARK 500 PRO B 273 103.35 -56.12 REMARK 500 ASN C 35 99.78 -62.91 REMARK 500 ARG C 55 35.76 -93.11 REMARK 500 ASN D 3 -150.02 49.35 REMARK 500 ILE D 4 -38.62 -37.15 REMARK 500 GLN D 25 115.86 -37.72 REMARK 500 SER D 32 74.64 -113.22 REMARK 500 GLU D 84 -118.49 30.69 REMARK 500 ASP D 86 53.98 -97.48 REMARK 500 ALA D 134 29.78 -76.09 REMARK 500 LYS D 135 -3.03 -147.34 REMARK 500 GLU D 257 47.65 -80.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UD1 D 288 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1GVN RELATED DB: PDB REMARK 900 RELATED ID: 2P5T RELATED DB: PDB DBREF 3Q8X A 1 90 UNP Q6UZC8 Q6UZC8_STRPY 1 90 DBREF 3Q8X B 1 287 UNP Q54944 ZTOX_STRPY 1 287 DBREF 3Q8X C 1 90 UNP Q6UZC8 Q6UZC8_STRPY 1 90 DBREF 3Q8X D 1 287 UNP Q54944 ZTOX_STRPY 1 287 SEQRES 1 A 90 MET ALA VAL THR TYR GLU LYS THR PHE GLU ILE GLU ILE SEQRES 2 A 90 ILE ASN GLU LEU SER ALA SER VAL TYR ASN ARG VAL LEU SEQRES 3 A 90 ASN TYR VAL LEU ASN HIS GLU LEU ASN LYS ASN ASP SER SEQRES 4 A 90 GLN LEU LEU GLU VAL ASN LEU LEU ASN GLN LEU LYS LEU SEQRES 5 A 90 ALA LYS ARG VAL ASN LEU PHE ASP TYR SER LEU GLU GLU SEQRES 6 A 90 LEU GLN ALA VAL HIS GLU TYR TRP ARG SER MET ASN ARG SEQRES 7 A 90 TYR SER LYS GLN VAL LEU ASN LYS GLU LYS VAL ALA SEQRES 1 B 287 MET ALA ASN ILE VAL ASN PHE THR ASP LYS GLN PHE GLU SEQRES 2 B 287 ASN ARG LEU ASN ASP ASN LEU GLU GLU LEU ILE GLN GLY SEQRES 3 B 287 LYS LYS ALA VAL GLU SER PRO THR ALA PHE LEU LEU GLY SEQRES 4 B 287 GLY GLN PRO GLY SER GLY LYS THR SER LEU ARG SER ALA SEQRES 5 B 287 ILE PHE GLU GLU THR GLN GLY ASN VAL ILE VAL ILE ASP SEQRES 6 B 287 ASN ASP THR PHE LYS GLN GLN HIS PRO ASN PHE ASP GLU SEQRES 7 B 287 LEU VAL LYS LEU TYR GLU LYS ASP VAL VAL LYS HIS VAL SEQRES 8 B 287 THR PRO TYR SER ASN ARG MET THR GLU ALA ILE ILE SER SEQRES 9 B 287 ARG LEU SER ASP GLN GLY TYR ASN LEU VAL ILE GLU GLY SEQRES 10 B 287 THR GLY ARG THR THR ASP VAL PRO ILE GLN THR ALA THR SEQRES 11 B 287 MET LEU GLN ALA LYS GLY TYR GLU THR LYS MET TYR VAL SEQRES 12 B 287 MET ALA VAL PRO LYS ILE ASN SER TYR LEU GLY THR ILE SEQRES 13 B 287 GLU ARG TYR GLU THR MET TYR ALA ASP ASP PRO MET THR SEQRES 14 B 287 ALA ARG ALA THR PRO LYS GLN ALA HIS ASP ILE VAL VAL SEQRES 15 B 287 LYS ASN LEU PRO THR ASN LEU GLU THR LEU HIS LYS THR SEQRES 16 B 287 GLY LEU PHE SER ASP ILE ARG LEU TYR ASN ARG GLU GLY SEQRES 17 B 287 VAL LYS LEU TYR SER SER LEU GLU THR PRO SER ILE SER SEQRES 18 B 287 PRO LYS GLU THR LEU GLU LYS GLU LEU ASN ARG LYS VAL SEQRES 19 B 287 SER GLY LYS GLU ILE GLN PRO THR LEU GLU ARG ILE GLU SEQRES 20 B 287 GLN LYS MET VAL LEU ASN LYS HIS GLN GLU THR PRO GLU SEQRES 21 B 287 PHE LYS ALA ILE GLN GLN LYS LEU GLU SER LEU GLN PRO SEQRES 22 B 287 PRO THR PRO PRO ILE PRO LYS THR PRO LYS LEU PRO GLY SEQRES 23 B 287 ILE SEQRES 1 C 90 MET ALA VAL THR TYR GLU LYS THR PHE GLU ILE GLU ILE SEQRES 2 C 90 ILE ASN GLU LEU SER ALA SER VAL TYR ASN ARG VAL LEU SEQRES 3 C 90 ASN TYR VAL LEU ASN HIS GLU LEU ASN LYS ASN ASP SER SEQRES 4 C 90 GLN LEU LEU GLU VAL ASN LEU LEU ASN GLN LEU LYS LEU SEQRES 5 C 90 ALA LYS ARG VAL ASN LEU PHE ASP TYR SER LEU GLU GLU SEQRES 6 C 90 LEU GLN ALA VAL HIS GLU TYR TRP ARG SER MET ASN ARG SEQRES 7 C 90 TYR SER LYS GLN VAL LEU ASN LYS GLU LYS VAL ALA SEQRES 1 D 287 MET ALA ASN ILE VAL ASN PHE THR ASP LYS GLN PHE GLU SEQRES 2 D 287 ASN ARG LEU ASN ASP ASN LEU GLU GLU LEU ILE GLN GLY SEQRES 3 D 287 LYS LYS ALA VAL GLU SER PRO THR ALA PHE LEU LEU GLY SEQRES 4 D 287 GLY GLN PRO GLY SER GLY LYS THR SER LEU ARG SER ALA SEQRES 5 D 287 ILE PHE GLU GLU THR GLN GLY ASN VAL ILE VAL ILE ASP SEQRES 6 D 287 ASN ASP THR PHE LYS GLN GLN HIS PRO ASN PHE ASP GLU SEQRES 7 D 287 LEU VAL LYS LEU TYR GLU LYS ASP VAL VAL LYS HIS VAL SEQRES 8 D 287 THR PRO TYR SER ASN ARG MET THR GLU ALA ILE ILE SER SEQRES 9 D 287 ARG LEU SER ASP GLN GLY TYR ASN LEU VAL ILE GLU GLY SEQRES 10 D 287 THR GLY ARG THR THR ASP VAL PRO ILE GLN THR ALA THR SEQRES 11 D 287 MET LEU GLN ALA LYS GLY TYR GLU THR LYS MET TYR VAL SEQRES 12 D 287 MET ALA VAL PRO LYS ILE ASN SER TYR LEU GLY THR ILE SEQRES 13 D 287 GLU ARG TYR GLU THR MET TYR ALA ASP ASP PRO MET THR SEQRES 14 D 287 ALA ARG ALA THR PRO LYS GLN ALA HIS ASP ILE VAL VAL SEQRES 15 D 287 LYS ASN LEU PRO THR ASN LEU GLU THR LEU HIS LYS THR SEQRES 16 D 287 GLY LEU PHE SER ASP ILE ARG LEU TYR ASN ARG GLU GLY SEQRES 17 D 287 VAL LYS LEU TYR SER SER LEU GLU THR PRO SER ILE SER SEQRES 18 D 287 PRO LYS GLU THR LEU GLU LYS GLU LEU ASN ARG LYS VAL SEQRES 19 D 287 SER GLY LYS GLU ILE GLN PRO THR LEU GLU ARG ILE GLU SEQRES 20 D 287 GLN LYS MET VAL LEU ASN LYS HIS GLN GLU THR PRO GLU SEQRES 21 D 287 PHE LYS ALA ILE GLN GLN LYS LEU GLU SER LEU GLN PRO SEQRES 22 D 287 PRO THR PRO PRO ILE PRO LYS THR PRO LYS LEU PRO GLY SEQRES 23 D 287 ILE HET SO4 B 602 5 HET SO4 D 603 5 HET UD1 D 288 39 HETNAM SO4 SULFATE ION HETNAM UD1 URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE FORMUL 5 SO4 2(O4 S 2-) FORMUL 7 UD1 C17 H27 N3 O17 P2 HELIX 1 1 THR A 4 HIS A 32 1 29 HELIX 2 2 LEU A 41 ARG A 55 1 15 HELIX 3 3 VAL A 56 TYR A 61 5 6 HELIX 4 4 SER A 62 LEU A 84 1 23 HELIX 5 5 THR B 8 GLN B 25 1 18 HELIX 6 6 LYS B 46 THR B 57 1 12 HELIX 7 7 ASP B 65 HIS B 73 5 9 HELIX 8 8 ASN B 75 GLU B 84 1 10 HELIX 9 9 VAL B 87 GLY B 110 1 24 HELIX 10 10 THR B 122 ALA B 134 1 13 HELIX 11 11 PRO B 147 ASP B 166 1 20 HELIX 12 12 PRO B 174 GLY B 196 1 23 HELIX 13 13 PRO B 222 ASN B 231 1 10 HELIX 14 14 SER B 235 ASN B 253 1 19 HELIX 15 15 THR B 258 LEU B 271 1 14 HELIX 16 16 THR C 4 HIS C 32 1 29 HELIX 17 17 LEU C 41 LYS C 54 1 14 HELIX 18 18 ASN C 57 TYR C 61 5 5 HELIX 19 19 SER C 62 LEU C 84 1 23 HELIX 20 20 ALA D 2 ASN D 6 5 5 HELIX 21 21 THR D 8 GLN D 25 1 18 HELIX 22 22 LYS D 46 THR D 57 1 12 HELIX 23 23 ASP D 65 HIS D 73 5 9 HELIX 24 24 LEU D 79 GLU D 84 1 6 HELIX 25 25 VAL D 87 GLY D 110 1 24 HELIX 26 26 THR D 122 ALA D 134 1 13 HELIX 27 27 PRO D 147 ASP D 166 1 20 HELIX 28 28 PRO D 174 GLY D 196 1 23 HELIX 29 29 SER D 221 ARG D 232 1 12 HELIX 30 30 SER D 235 ASN D 253 1 19 HELIX 31 31 THR D 258 GLU D 269 1 12 SHEET 1 A 6 ILE B 62 ILE B 64 0 SHEET 2 A 6 LEU B 113 ILE B 115 1 O VAL B 114 N ILE B 64 SHEET 3 A 6 THR B 34 GLY B 39 1 N PHE B 36 O LEU B 113 SHEET 4 A 6 GLU B 138 MET B 144 1 O LYS B 140 N ALA B 35 SHEET 5 A 6 ILE B 201 TYR B 204 1 O ARG B 202 N VAL B 143 SHEET 6 A 6 LYS B 210 SER B 213 -1 O LEU B 211 N LEU B 203 SHEET 1 B 6 ILE D 62 ILE D 64 0 SHEET 2 B 6 LEU D 113 ILE D 115 1 O VAL D 114 N ILE D 64 SHEET 3 B 6 THR D 34 GLY D 39 1 N PHE D 36 O LEU D 113 SHEET 4 B 6 GLU D 138 MET D 144 1 O GLU D 138 N ALA D 35 SHEET 5 B 6 ILE D 201 TYR D 204 1 O ARG D 202 N VAL D 143 SHEET 6 B 6 LYS D 210 SER D 213 -1 O LEU D 211 N LEU D 203 SITE 1 AC1 7 GLU A 12 GLN B 41 PRO B 42 GLY B 43 SITE 2 AC1 7 SER B 44 GLY B 45 LYS B 46 SITE 1 AC2 5 GLU C 12 GLY D 43 SER D 44 GLY D 45 SITE 2 AC2 5 LYS D 46 SITE 1 AC3 12 ASP D 65 ASN D 66 ASP D 67 GLU D 100 SITE 2 AC3 12 ILE D 103 ILE D 115 GLU D 116 GLY D 117 SITE 3 AC3 12 THR D 118 ARG D 120 VAL D 124 THR D 128 CRYST1 59.800 79.990 195.170 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016722 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012502 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005124 0.00000