HEADER TRANSPORT PROTEIN 12-JAN-11 3QAX TITLE CRYSTAL STRUCTURE ANALYSIS OF THE CPB0502 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE ABC TRANSPORTER ARGININE-BINDING PROTEIN ARTJ; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PERIPLASMIC ARGININE TRANSPORTER PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHLAMYDOPHILA PNEUMONIAE; SOURCE 3 ORGANISM_COMMON: CHLAMYDOPHILA PNEUMONIAE; SOURCE 4 ORGANISM_TAXID: 83558; SOURCE 5 GENE: ARTJ, CPN_0482, CP_0272, CPJ0482, CPB0502; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS ABC TRANSPORTER, ARGININE BINDING, PERIPLASMIC, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.E.CHANG,K.Y.HWANG REVDAT 3 20-MAR-24 3QAX 1 REMARK SEQADV REVDAT 2 28-DEC-16 3QAX 1 JRNL REVDAT 1 18-JAN-12 3QAX 0 JRNL AUTH J.E.CHANG,K.Y.HWANG JRNL TITL CRYSTAL STRUCTURE OF THE CPB0502 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.92 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 3 NUMBER OF REFLECTIONS : 29781 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1575 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2094 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.66 REMARK 3 BIN R VALUE (WORKING SET) : 0.2180 REMARK 3 BIN FREE R VALUE SET COUNT : 102 REMARK 3 BIN FREE R VALUE : 0.3060 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3661 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 496 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.04000 REMARK 3 B22 (A**2) : 0.05000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.03000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.196 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.130 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.669 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.931 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.878 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3753 ; 0.022 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5098 ; 1.741 ; 1.986 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 465 ; 6.765 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 159 ;37.948 ;24.591 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 667 ;17.826 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;15.941 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 595 ; 0.117 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2783 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2341 ; 1.188 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3806 ; 2.106 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1412 ; 3.424 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1292 ; 5.464 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3QAX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-JAN-11. REMARK 100 THE DEPOSITION ID IS D_1000063414. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-APR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99188 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42387 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 29.960 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.800 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM ACETATE, 20% PEG 3350, 1,5 REMARK 280 -DIAMINOPENTANE DIHYDROCHLORIDE, PH 8.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 297KK REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 25.86400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 ILE A -19 REMARK 465 LYS A -18 REMARK 465 GLN A -17 REMARK 465 ILE A -16 REMARK 465 GLY A -15 REMARK 465 ARG A -14 REMARK 465 PHE A -13 REMARK 465 PHE A -12 REMARK 465 ARG A -11 REMARK 465 ALA A -10 REMARK 465 PHE A -9 REMARK 465 ILE A -8 REMARK 465 PHE A -7 REMARK 465 ILE A -6 REMARK 465 MET A -5 REMARK 465 PRO A -4 REMARK 465 LEU A -3 REMARK 465 SER A -2 REMARK 465 LEU A -1 REMARK 465 THR A 0 REMARK 465 SER A 1 REMARK 465 CYS A 2 REMARK 465 GLU A 3 REMARK 465 SER A 4 REMARK 465 LYS A 5 REMARK 465 ILE A 6 REMARK 465 ASP A 7 REMARK 465 ARG A 8 REMARK 465 ASN A 9 REMARK 465 VAL A 242 REMARK 465 TRP A 243 REMARK 465 GLY A 244 REMARK 465 HIS A 245 REMARK 465 THR A 246 REMARK 465 PRO A 247 REMARK 465 MET B -20 REMARK 465 ILE B -19 REMARK 465 LYS B -18 REMARK 465 GLN B -17 REMARK 465 ILE B -16 REMARK 465 GLY B -15 REMARK 465 ARG B -14 REMARK 465 PHE B -13 REMARK 465 PHE B -12 REMARK 465 ARG B -11 REMARK 465 ALA B -10 REMARK 465 PHE B -9 REMARK 465 ILE B -8 REMARK 465 PHE B -7 REMARK 465 ILE B -6 REMARK 465 MET B -5 REMARK 465 PRO B -4 REMARK 465 LEU B -3 REMARK 465 SER B -2 REMARK 465 LEU B -1 REMARK 465 THR B 0 REMARK 465 SER B 1 REMARK 465 CYS B 2 REMARK 465 GLU B 3 REMARK 465 SER B 4 REMARK 465 LYS B 5 REMARK 465 ILE B 6 REMARK 465 VAL B 242 REMARK 465 TRP B 243 REMARK 465 GLY B 244 REMARK 465 HIS B 245 REMARK 465 THR B 246 REMARK 465 PRO B 247 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE1 TRP B 12 O HOH B 436 1.85 REMARK 500 OE1 GLU B 189 O HOH B 291 1.93 REMARK 500 O HOH B 352 O HOH B 427 1.98 REMARK 500 O LYS A 158 O HOH A 428 2.01 REMARK 500 O HOH A 309 O HOH A 428 2.02 REMARK 500 O HOH B 269 O HOH B 438 2.04 REMARK 500 O HOH B 430 O HOH B 464 2.08 REMARK 500 O GLY A 34 O HOH A 301 2.09 REMARK 500 O HOH A 273 O HOH A 301 2.13 REMARK 500 O HOH B 408 O HOH B 433 2.17 REMARK 500 O PRO B 111 O HOH B 312 2.17 REMARK 500 O HOH A 341 O HOH A 366 2.17 REMARK 500 OD1 ASP B 216 O HOH B 330 2.19 REMARK 500 O HOH A 306 O HOH A 449 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 205 CG GLU A 205 CD 0.094 REMARK 500 GLU B 109 CG GLU B 109 CD 0.097 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 THR A 19 N - CA - CB ANGL. DEV. = -13.0 DEGREES REMARK 500 ARG A 83 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ASP B 59 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG B 170 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG B 203 NE - CZ - NH1 ANGL. DEV. = -3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 19 11.68 -141.19 REMARK 500 ALA A 75 33.00 -150.26 REMARK 500 TYR A 92 -14.33 -140.93 REMARK 500 ARG A 203 64.80 -114.89 REMARK 500 ARG B 8 96.20 -58.37 REMARK 500 ALA B 75 33.40 -155.61 REMARK 500 GLU B 109 113.94 -31.67 REMARK 500 ARG B 203 65.76 -104.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 THR A 19 TYR A 20 -147.74 REMARK 500 THR B 19 TYR B 20 -148.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ARG A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ARG B 600 DBREF 3QAX A -20 238 UNP Q9Z869 ARTJ_CHLPN 1 259 DBREF 3QAX B -20 238 UNP Q9Z869 ARTJ_CHLPN 1 259 SEQADV 3QAX TYR A 128 UNP Q9Z869 PHE 149 CONFLICT SEQADV 3QAX ALA A 239 UNP Q9Z869 EXPRESSION TAG SEQADV 3QAX ALA A 240 UNP Q9Z869 EXPRESSION TAG SEQADV 3QAX GLN A 241 UNP Q9Z869 EXPRESSION TAG SEQADV 3QAX VAL A 242 UNP Q9Z869 EXPRESSION TAG SEQADV 3QAX TRP A 243 UNP Q9Z869 EXPRESSION TAG SEQADV 3QAX GLY A 244 UNP Q9Z869 EXPRESSION TAG SEQADV 3QAX HIS A 245 UNP Q9Z869 EXPRESSION TAG SEQADV 3QAX THR A 246 UNP Q9Z869 EXPRESSION TAG SEQADV 3QAX PRO A 247 UNP Q9Z869 EXPRESSION TAG SEQADV 3QAX TYR B 128 UNP Q9Z869 PHE 149 CONFLICT SEQADV 3QAX ALA B 239 UNP Q9Z869 EXPRESSION TAG SEQADV 3QAX ALA B 240 UNP Q9Z869 EXPRESSION TAG SEQADV 3QAX GLN B 241 UNP Q9Z869 EXPRESSION TAG SEQADV 3QAX VAL B 242 UNP Q9Z869 EXPRESSION TAG SEQADV 3QAX TRP B 243 UNP Q9Z869 EXPRESSION TAG SEQADV 3QAX GLY B 244 UNP Q9Z869 EXPRESSION TAG SEQADV 3QAX HIS B 245 UNP Q9Z869 EXPRESSION TAG SEQADV 3QAX THR B 246 UNP Q9Z869 EXPRESSION TAG SEQADV 3QAX PRO B 247 UNP Q9Z869 EXPRESSION TAG SEQRES 1 A 268 MET ILE LYS GLN ILE GLY ARG PHE PHE ARG ALA PHE ILE SEQRES 2 A 268 PHE ILE MET PRO LEU SER LEU THR SER CYS GLU SER LYS SEQRES 3 A 268 ILE ASP ARG ASN ARG ILE TRP ILE VAL GLY THR ASN ALA SEQRES 4 A 268 THR TYR PRO PRO PHE GLU TYR VAL ASP ALA GLN GLY GLU SEQRES 5 A 268 VAL VAL GLY PHE ASP ILE ASP LEU ALA LYS ALA ILE SER SEQRES 6 A 268 GLU LYS LEU GLY LYS GLN LEU GLU VAL ARG GLU PHE ALA SEQRES 7 A 268 PHE ASP ALA LEU ILE LEU ASN LEU LYS LYS HIS ARG ILE SEQRES 8 A 268 ASP ALA ILE LEU ALA GLY MET SER ILE THR PRO SER ARG SEQRES 9 A 268 GLN LYS GLU ILE ALA LEU LEU PRO TYR TYR GLY ASP GLU SEQRES 10 A 268 VAL GLN GLU LEU MET VAL VAL SER LYS ARG SER LEU GLU SEQRES 11 A 268 THR PRO VAL LEU PRO LEU THR GLN TYR SER SER VAL ALA SEQRES 12 A 268 VAL GLN THR GLY THR TYR GLN GLU HIS TYR LEU LEU SER SEQRES 13 A 268 GLN PRO GLY ILE CYS VAL ARG SER PHE ASP SER THR LEU SEQRES 14 A 268 GLU VAL ILE MET GLU VAL ARG TYR GLY LYS SER PRO VAL SEQRES 15 A 268 ALA VAL LEU GLU PRO SER VAL GLY ARG VAL VAL LEU LYS SEQRES 16 A 268 ASP PHE PRO ASN LEU VAL ALA THR ARG LEU GLU LEU PRO SEQRES 17 A 268 PRO GLU CYS TRP VAL LEU GLY CYS GLY LEU GLY VAL ALA SEQRES 18 A 268 LYS ASP ARG PRO GLU GLU ILE GLN THR ILE GLN GLN ALA SEQRES 19 A 268 ILE THR ASP LEU LYS SER GLU GLY VAL ILE GLN SER LEU SEQRES 20 A 268 THR LYS LYS TRP GLN LEU SER GLU VAL ALA TYR GLU ALA SEQRES 21 A 268 ALA GLN VAL TRP GLY HIS THR PRO SEQRES 1 B 268 MET ILE LYS GLN ILE GLY ARG PHE PHE ARG ALA PHE ILE SEQRES 2 B 268 PHE ILE MET PRO LEU SER LEU THR SER CYS GLU SER LYS SEQRES 3 B 268 ILE ASP ARG ASN ARG ILE TRP ILE VAL GLY THR ASN ALA SEQRES 4 B 268 THR TYR PRO PRO PHE GLU TYR VAL ASP ALA GLN GLY GLU SEQRES 5 B 268 VAL VAL GLY PHE ASP ILE ASP LEU ALA LYS ALA ILE SER SEQRES 6 B 268 GLU LYS LEU GLY LYS GLN LEU GLU VAL ARG GLU PHE ALA SEQRES 7 B 268 PHE ASP ALA LEU ILE LEU ASN LEU LYS LYS HIS ARG ILE SEQRES 8 B 268 ASP ALA ILE LEU ALA GLY MET SER ILE THR PRO SER ARG SEQRES 9 B 268 GLN LYS GLU ILE ALA LEU LEU PRO TYR TYR GLY ASP GLU SEQRES 10 B 268 VAL GLN GLU LEU MET VAL VAL SER LYS ARG SER LEU GLU SEQRES 11 B 268 THR PRO VAL LEU PRO LEU THR GLN TYR SER SER VAL ALA SEQRES 12 B 268 VAL GLN THR GLY THR TYR GLN GLU HIS TYR LEU LEU SER SEQRES 13 B 268 GLN PRO GLY ILE CYS VAL ARG SER PHE ASP SER THR LEU SEQRES 14 B 268 GLU VAL ILE MET GLU VAL ARG TYR GLY LYS SER PRO VAL SEQRES 15 B 268 ALA VAL LEU GLU PRO SER VAL GLY ARG VAL VAL LEU LYS SEQRES 16 B 268 ASP PHE PRO ASN LEU VAL ALA THR ARG LEU GLU LEU PRO SEQRES 17 B 268 PRO GLU CYS TRP VAL LEU GLY CYS GLY LEU GLY VAL ALA SEQRES 18 B 268 LYS ASP ARG PRO GLU GLU ILE GLN THR ILE GLN GLN ALA SEQRES 19 B 268 ILE THR ASP LEU LYS SER GLU GLY VAL ILE GLN SER LEU SEQRES 20 B 268 THR LYS LYS TRP GLN LEU SER GLU VAL ALA TYR GLU ALA SEQRES 21 B 268 ALA GLN VAL TRP GLY HIS THR PRO HET ARG A 600 12 HET ARG B 600 12 HETNAM ARG ARGININE FORMUL 3 ARG 2(C6 H15 N4 O2 1+) FORMUL 5 HOH *496(H2 O) HELIX 1 1 GLY A 34 GLY A 48 1 15 HELIX 2 2 ALA A 57 ASP A 59 5 3 HELIX 3 3 ALA A 60 LYS A 67 1 8 HELIX 4 4 THR A 80 LYS A 85 1 6 HELIX 5 5 PRO A 114 TYR A 118 5 5 HELIX 6 6 THR A 127 SER A 135 1 9 HELIX 7 7 SER A 146 TYR A 156 1 11 HELIX 8 8 GLU A 165 LEU A 173 1 9 HELIX 9 9 LYS A 174 PHE A 176 5 3 HELIX 10 10 PRO A 187 TRP A 191 5 5 HELIX 11 11 ARG A 203 GLU A 220 1 18 HELIX 12 12 GLY A 221 TRP A 230 1 10 HELIX 13 13 GLY B 34 GLY B 48 1 15 HELIX 14 14 ALA B 57 ASP B 59 5 3 HELIX 15 15 ALA B 60 LYS B 67 1 8 HELIX 16 16 THR B 80 LYS B 85 1 6 HELIX 17 17 PRO B 114 TYR B 118 5 5 HELIX 18 18 THR B 127 SER B 135 1 9 HELIX 19 19 SER B 146 TYR B 156 1 11 HELIX 20 20 GLU B 165 LEU B 173 1 9 HELIX 21 21 LYS B 174 PHE B 176 5 3 HELIX 22 22 PRO B 187 TRP B 191 5 5 HELIX 23 23 ARG B 203 GLU B 220 1 18 HELIX 24 24 GLY B 221 TRP B 230 1 10 SHEET 1 A 3 GLN A 50 GLU A 55 0 SHEET 2 A 3 ILE A 11 THR A 16 1 N TRP A 12 O GLN A 50 SHEET 3 A 3 ALA A 72 ILE A 73 1 O ALA A 72 N GLY A 15 SHEET 1 B 2 TYR A 25 VAL A 26 0 SHEET 2 B 2 VAL A 32 VAL A 33 -1 O VAL A 33 N TYR A 25 SHEET 1 C 2 ALA A 88 TYR A 93 0 SHEET 2 C 2 CYS A 195 VAL A 199 -1 O LEU A 197 N LEU A 90 SHEET 1 D 5 VAL A 141 PHE A 144 0 SHEET 2 D 5 VAL A 121 GLN A 124 1 N VAL A 121 O ARG A 142 SHEET 3 D 5 VAL A 161 LEU A 164 1 O VAL A 161 N ALA A 122 SHEET 4 D 5 GLU A 99 LYS A 105 -1 N MET A 101 O LEU A 164 SHEET 5 D 5 LEU A 179 GLU A 185 -1 O VAL A 180 N SER A 104 SHEET 1 E 3 GLN B 50 GLU B 55 0 SHEET 2 E 3 ILE B 11 THR B 16 1 N VAL B 14 O ARG B 54 SHEET 3 E 3 ALA B 72 ILE B 73 1 O ALA B 72 N GLY B 15 SHEET 1 F 2 TYR B 25 VAL B 26 0 SHEET 2 F 2 VAL B 32 VAL B 33 -1 O VAL B 33 N TYR B 25 SHEET 1 G 2 ILE B 87 TYR B 93 0 SHEET 2 G 2 CYS B 195 ALA B 200 -1 O LEU B 197 N LEU B 90 SHEET 1 H 5 VAL B 141 PHE B 144 0 SHEET 2 H 5 VAL B 121 GLN B 124 1 N VAL B 123 O PHE B 144 SHEET 3 H 5 VAL B 161 LEU B 164 1 O VAL B 161 N ALA B 122 SHEET 4 H 5 GLU B 99 LYS B 105 -1 N VAL B 103 O ALA B 162 SHEET 5 H 5 LEU B 179 GLU B 185 -1 O THR B 182 N VAL B 102 CISPEP 1 PRO A 21 PRO A 22 0 -3.28 CISPEP 2 THR A 110 PRO A 111 0 1.43 CISPEP 3 LEU A 113 PRO A 114 0 7.08 CISPEP 4 PRO B 21 PRO B 22 0 2.11 CISPEP 5 THR B 110 PRO B 111 0 12.06 CISPEP 6 LEU B 113 PRO B 114 0 1.97 SITE 1 AC1 14 ASN A 17 THR A 19 TYR A 20 GLU A 24 SITE 2 AC1 14 PHE A 58 ALA A 75 GLY A 76 SER A 78 SITE 3 AC1 14 ARG A 83 GLN A 124 THR A 127 TYR A 128 SITE 4 AC1 14 GLU A 165 HOH A 255 SITE 1 AC2 15 ASN B 17 THR B 19 TYR B 20 GLU B 24 SITE 2 AC2 15 PHE B 58 ALA B 75 GLY B 76 MET B 77 SITE 3 AC2 15 SER B 78 ARG B 83 GLN B 124 THR B 127 SITE 4 AC2 15 TYR B 128 GLU B 165 HOH B 306 CRYST1 40.330 51.728 119.694 90.00 91.03 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024795 0.000000 0.000444 0.00000 SCALE2 0.000000 0.019332 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008356 0.00000