data_3QD4
#
_entry.id 3QD4
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.398
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 3QD4 pdb_00003qd4 10.2210/pdb3qd4/pdb
RCSB RCSB063493 ? ?
WWPDB D_1000063493 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2011-03-09
2 'Structure model' 1 1 2011-07-13
3 'Structure model' 1 2 2011-11-16
4 'Structure model' 1 3 2024-02-21
5 'Structure model' 1 4 2024-11-06
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Atomic model'
3 4 'Structure model' 'Data collection'
4 4 'Structure model' 'Database references'
5 4 'Structure model' 'Derived calculations'
6 5 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' chem_comp_atom
2 4 'Structure model' chem_comp_bond
3 4 'Structure model' database_2
4 4 'Structure model' struct_site
5 5 'Structure model' pdbx_entry_details
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_database_2.pdbx_DOI'
2 4 'Structure model' '_database_2.pdbx_database_accession'
3 4 'Structure model' '_struct_site.pdbx_auth_asym_id'
4 4 'Structure model' '_struct_site.pdbx_auth_comp_id'
5 4 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
_pdbx_database_status.entry_id 3QD4
_pdbx_database_status.status_code REL
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.recvd_initial_deposition_date 2011-01-17
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.details
_pdbx_database_related.content_type
PDB 3NUN . unspecified
PDB 3NUS . unspecified
PDB 3NUU . unspecified
PDB 3NUY . unspecified
PDB 3QCQ . unspecified
PDB 3QCS . unspecified
PDB 3QCX . unspecified
PDB 3QCY . unspecified
PDB 3QD0 . unspecified
PDB 3QD3 . unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Medina, J.R.' 1
'Becker, C.J.' 2
'Blackledge, C.W.' 3
'Duquenne, C.' 4
'Feng, Y.' 5
'Grant, S.W.' 6
'Heerding, D.' 7
'Li, W.H.' 8
'Miller, W.H.' 9
'Romeril, S.P.' 10
'Scherzer, D.' 11
'Shu, A.' 12
'Bobko, M.A.' 13
'Chadderton, A.R.' 14
'Dumble, M.' 15
'Gradiner, C.M.' 16
'Gilbert, S.' 17
'Liu, Q.' 18
'Rabindran, S.K.' 19
'Sudakin, V.' 20
'Xiang, H.' 21
'Brady, P.G.' 22
'Campobasso, N.' 23
'Ward, P.' 24
'Axten, J.M.' 25
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.journal_id_ASTM
_citation.country
_citation.journal_id_ISSN
_citation.journal_id_CSD
_citation.book_publisher
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'Structure-Based Design of Potent and Selective 3-Phosphoinositide-Dependent Kinase-1 (PDK1) Inhibitors.' J.Med.Chem. 54
1871 1895 2011 JMCMAR US 0022-2623 0151 ? 21341675 10.1021/jm101527u
1
;Aminoindazole PDK1 Inhibitors: A Case Study in
Fragment-Based Drug Discovery
;
'ACS Med. Chem. Lett.' 1 439 442 2010 ? US 1948-5875 ? ? ? ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Medina, J.R.' 1 ?
primary 'Becker, C.J.' 2 ?
primary 'Blackledge, C.W.' 3 ?
primary 'Duquenne, C.' 4 ?
primary 'Feng, Y.' 5 ?
primary 'Grant, S.W.' 6 ?
primary 'Heerding, D.' 7 ?
primary 'Li, W.H.' 8 ?
primary 'Miller, W.H.' 9 ?
primary 'Romeril, S.P.' 10 ?
primary 'Scherzer, D.' 11 ?
primary 'Shu, A.' 12 ?
primary 'Bobko, M.A.' 13 ?
primary 'Chadderton, A.R.' 14 ?
primary 'Dumble, M.' 15 ?
primary 'Gardiner, C.M.' 16 ?
primary 'Gilbert, S.' 17 ?
primary 'Liu, Q.' 18 ?
primary 'Rabindran, S.K.' 19 ?
primary 'Sudakin, V.' 20 ?
primary 'Xiang, H.' 21 ?
primary 'Brady, P.G.' 22 ?
primary 'Campobasso, N.' 23 ?
primary 'Ward, P.' 24 ?
primary 'Axten, J.M.' 25 ?
1 'Medina, J.R.' 26 ?
1 'Blackledge, C.W.' 27 ?
1 'Heerding, D.A.' 28 ?
1 'Campobasso, N.' 29 ?
1 'Ward, P.' 30 ?
1 'Briand, J.' 31 ?
1 'Wright, L.' 32 ?
1 'Axten, J.M.' 33 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer man '3-phosphoinositide-dependent protein kinase 1'
35652.852 1 2.7.11.1 ? 'kinase domain, residues 48-359' ?
2 non-polymer syn 'tert-butyl {(3R,5R)-1-[2-amino-6-(3-amino-2H-indazol-6-yl)pyrimidin-4-yl]-5-methylpiperidin-3-yl}carbamate'
438.526 1 ? ? ? ?
3 non-polymer syn 'SULFATE ION'
96.063 1 ? ? ? ?
4 water nat water
18.015 26 ? ? ? ?
#
_entity_name_com.entity_id 1
_entity_name_com.name hPDK1
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer yes
_entity_poly.pdbx_seq_one_letter_code
;GPAMDGTAAEPRPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV
TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK
PENILLNEDMHIQITDFGTAKVLSPESKQARAN(SEP)FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR
AGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLT
;
_entity_poly.pdbx_seq_one_letter_code_can
;GPAMDGTAAEPRPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV
TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK
PENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE
YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLT
;
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'tert-butyl {(3R,5R)-1-[2-amino-6-(3-amino-2H-indazol-6-yl)pyrimidin-4-yl]-5-methylpiperidin-3-yl}carbamate' 3Q6
3 'SULFATE ION' SO4
4 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 GLY n
1 2 PRO n
1 3 ALA n
1 4 MET n
1 5 ASP n
1 6 GLY n
1 7 THR n
1 8 ALA n
1 9 ALA n
1 10 GLU n
1 11 PRO n
1 12 ARG n
1 13 PRO n
1 14 GLY n
1 15 ALA n
1 16 GLY n
1 17 SER n
1 18 LEU n
1 19 GLN n
1 20 HIS n
1 21 ALA n
1 22 GLN n
1 23 PRO n
1 24 PRO n
1 25 PRO n
1 26 GLN n
1 27 PRO n
1 28 ARG n
1 29 LYS n
1 30 LYS n
1 31 ARG n
1 32 PRO n
1 33 GLU n
1 34 ASP n
1 35 PHE n
1 36 LYS n
1 37 PHE n
1 38 GLY n
1 39 LYS n
1 40 ILE n
1 41 LEU n
1 42 GLY n
1 43 GLU n
1 44 GLY n
1 45 SER n
1 46 PHE n
1 47 SER n
1 48 THR n
1 49 VAL n
1 50 VAL n
1 51 LEU n
1 52 ALA n
1 53 ARG n
1 54 GLU n
1 55 LEU n
1 56 ALA n
1 57 THR n
1 58 SER n
1 59 ARG n
1 60 GLU n
1 61 TYR n
1 62 ALA n
1 63 ILE n
1 64 LYS n
1 65 ILE n
1 66 LEU n
1 67 GLU n
1 68 LYS n
1 69 ARG n
1 70 HIS n
1 71 ILE n
1 72 ILE n
1 73 LYS n
1 74 GLU n
1 75 ASN n
1 76 LYS n
1 77 VAL n
1 78 PRO n
1 79 TYR n
1 80 VAL n
1 81 THR n
1 82 ARG n
1 83 GLU n
1 84 ARG n
1 85 ASP n
1 86 VAL n
1 87 MET n
1 88 SER n
1 89 ARG n
1 90 LEU n
1 91 ASP n
1 92 HIS n
1 93 PRO n
1 94 PHE n
1 95 PHE n
1 96 VAL n
1 97 LYS n
1 98 LEU n
1 99 TYR n
1 100 PHE n
1 101 THR n
1 102 PHE n
1 103 GLN n
1 104 ASP n
1 105 ASP n
1 106 GLU n
1 107 LYS n
1 108 LEU n
1 109 TYR n
1 110 PHE n
1 111 GLY n
1 112 LEU n
1 113 SER n
1 114 TYR n
1 115 ALA n
1 116 LYS n
1 117 ASN n
1 118 GLY n
1 119 GLU n
1 120 LEU n
1 121 LEU n
1 122 LYS n
1 123 TYR n
1 124 ILE n
1 125 ARG n
1 126 LYS n
1 127 ILE n
1 128 GLY n
1 129 SER n
1 130 PHE n
1 131 ASP n
1 132 GLU n
1 133 THR n
1 134 CYS n
1 135 THR n
1 136 ARG n
1 137 PHE n
1 138 TYR n
1 139 THR n
1 140 ALA n
1 141 GLU n
1 142 ILE n
1 143 VAL n
1 144 SER n
1 145 ALA n
1 146 LEU n
1 147 GLU n
1 148 TYR n
1 149 LEU n
1 150 HIS n
1 151 GLY n
1 152 LYS n
1 153 GLY n
1 154 ILE n
1 155 ILE n
1 156 HIS n
1 157 ARG n
1 158 ASP n
1 159 LEU n
1 160 LYS n
1 161 PRO n
1 162 GLU n
1 163 ASN n
1 164 ILE n
1 165 LEU n
1 166 LEU n
1 167 ASN n
1 168 GLU n
1 169 ASP n
1 170 MET n
1 171 HIS n
1 172 ILE n
1 173 GLN n
1 174 ILE n
1 175 THR n
1 176 ASP n
1 177 PHE n
1 178 GLY n
1 179 THR n
1 180 ALA n
1 181 LYS n
1 182 VAL n
1 183 LEU n
1 184 SER n
1 185 PRO n
1 186 GLU n
1 187 SER n
1 188 LYS n
1 189 GLN n
1 190 ALA n
1 191 ARG n
1 192 ALA n
1 193 ASN n
1 194 SEP n
1 195 PHE n
1 196 VAL n
1 197 GLY n
1 198 THR n
1 199 ALA n
1 200 GLN n
1 201 TYR n
1 202 VAL n
1 203 SER n
1 204 PRO n
1 205 GLU n
1 206 LEU n
1 207 LEU n
1 208 THR n
1 209 GLU n
1 210 LYS n
1 211 SER n
1 212 ALA n
1 213 CYS n
1 214 LYS n
1 215 SER n
1 216 SER n
1 217 ASP n
1 218 LEU n
1 219 TRP n
1 220 ALA n
1 221 LEU n
1 222 GLY n
1 223 CYS n
1 224 ILE n
1 225 ILE n
1 226 TYR n
1 227 GLN n
1 228 LEU n
1 229 VAL n
1 230 ALA n
1 231 GLY n
1 232 LEU n
1 233 PRO n
1 234 PRO n
1 235 PHE n
1 236 ARG n
1 237 ALA n
1 238 GLY n
1 239 ASN n
1 240 GLU n
1 241 TYR n
1 242 LEU n
1 243 ILE n
1 244 PHE n
1 245 GLN n
1 246 LYS n
1 247 ILE n
1 248 ILE n
1 249 LYS n
1 250 LEU n
1 251 GLU n
1 252 TYR n
1 253 ASP n
1 254 PHE n
1 255 PRO n
1 256 GLU n
1 257 LYS n
1 258 PHE n
1 259 PHE n
1 260 PRO n
1 261 LYS n
1 262 ALA n
1 263 ARG n
1 264 ASP n
1 265 LEU n
1 266 VAL n
1 267 GLU n
1 268 LYS n
1 269 LEU n
1 270 LEU n
1 271 VAL n
1 272 LEU n
1 273 ASP n
1 274 ALA n
1 275 THR n
1 276 LYS n
1 277 ARG n
1 278 LEU n
1 279 GLY n
1 280 CYS n
1 281 GLU n
1 282 GLU n
1 283 MET n
1 284 GLU n
1 285 GLY n
1 286 TYR n
1 287 GLY n
1 288 PRO n
1 289 LEU n
1 290 LYS n
1 291 ALA n
1 292 HIS n
1 293 PRO n
1 294 PHE n
1 295 PHE n
1 296 GLU n
1 297 SER n
1 298 VAL n
1 299 THR n
1 300 TRP n
1 301 GLU n
1 302 ASN n
1 303 LEU n
1 304 HIS n
1 305 GLN n
1 306 GLN n
1 307 THR n
1 308 PRO n
1 309 PRO n
1 310 LYS n
1 311 LEU n
1 312 THR n
#
_entity_src_gen.entity_id 1
_entity_src_gen.pdbx_src_id 1
_entity_src_gen.pdbx_alt_source_flag sample
_entity_src_gen.pdbx_seq_type ?
_entity_src_gen.pdbx_beg_seq_num ?
_entity_src_gen.pdbx_end_seq_num ?
_entity_src_gen.gene_src_common_name human
_entity_src_gen.gene_src_genus ?
_entity_src_gen.pdbx_gene_src_gene 'PDK1, PDPK1'
_entity_src_gen.gene_src_species ?
_entity_src_gen.gene_src_strain ?
_entity_src_gen.gene_src_tissue ?
_entity_src_gen.gene_src_tissue_fraction ?
_entity_src_gen.gene_src_details ?
_entity_src_gen.pdbx_gene_src_fragment ?
_entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens'
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606
_entity_src_gen.pdbx_gene_src_variant ?
_entity_src_gen.pdbx_gene_src_cell_line ?
_entity_src_gen.pdbx_gene_src_atcc ?
_entity_src_gen.pdbx_gene_src_organ ?
_entity_src_gen.pdbx_gene_src_organelle ?
_entity_src_gen.pdbx_gene_src_cell ?
_entity_src_gen.pdbx_gene_src_cellular_location ?
_entity_src_gen.host_org_common_name 'fall armyworm'
_entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda'
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108
_entity_src_gen.host_org_genus ?
_entity_src_gen.pdbx_host_org_gene ?
_entity_src_gen.pdbx_host_org_organ ?
_entity_src_gen.host_org_species ?
_entity_src_gen.pdbx_host_org_tissue ?
_entity_src_gen.pdbx_host_org_tissue_fraction ?
_entity_src_gen.pdbx_host_org_strain ?
_entity_src_gen.pdbx_host_org_variant ?
_entity_src_gen.pdbx_host_org_cell_line ?
_entity_src_gen.pdbx_host_org_atcc ?
_entity_src_gen.pdbx_host_org_culture_collection ?
_entity_src_gen.pdbx_host_org_cell ?
_entity_src_gen.pdbx_host_org_organelle ?
_entity_src_gen.pdbx_host_org_cellular_location ?
_entity_src_gen.pdbx_host_org_vector_type ?
_entity_src_gen.pdbx_host_org_vector ?
_entity_src_gen.host_org_details ?
_entity_src_gen.expression_system_id ?
_entity_src_gen.plasmid_name ?
_entity_src_gen.plasmid_details ?
_entity_src_gen.pdbx_description ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
3Q6 non-polymer .
'tert-butyl {(3R,5R)-1-[2-amino-6-(3-amino-2H-indazol-6-yl)pyrimidin-4-yl]-5-methylpiperidin-3-yl}carbamate' ?
'C22 H30 N8 O2' 438.526
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
SEP 'L-peptide linking' n PHOSPHOSERINE PHOSPHONOSERINE 'C3 H8 N O6 P' 185.072
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 GLY 1 48 ? ? ? A . n
A 1 2 PRO 2 49 ? ? ? A . n
A 1 3 ALA 3 50 ? ? ? A . n
A 1 4 MET 4 51 ? ? ? A . n
A 1 5 ASP 5 52 ? ? ? A . n
A 1 6 GLY 6 53 ? ? ? A . n
A 1 7 THR 7 54 ? ? ? A . n
A 1 8 ALA 8 55 ? ? ? A . n
A 1 9 ALA 9 56 ? ? ? A . n
A 1 10 GLU 10 57 ? ? ? A . n
A 1 11 PRO 11 58 ? ? ? A . n
A 1 12 ARG 12 59 ? ? ? A . n
A 1 13 PRO 13 60 ? ? ? A . n
A 1 14 GLY 14 61 ? ? ? A . n
A 1 15 ALA 15 62 ? ? ? A . n
A 1 16 GLY 16 63 ? ? ? A . n
A 1 17 SER 17 64 ? ? ? A . n
A 1 18 LEU 18 65 ? ? ? A . n
A 1 19 GLN 19 66 ? ? ? A . n
A 1 20 HIS 20 67 ? ? ? A . n
A 1 21 ALA 21 68 ? ? ? A . n
A 1 22 GLN 22 69 ? ? ? A . n
A 1 23 PRO 23 70 ? ? ? A . n
A 1 24 PRO 24 71 71 PRO PRO A . n
A 1 25 PRO 25 72 72 PRO PRO A . n
A 1 26 GLN 26 73 73 GLN GLN A . n
A 1 27 PRO 27 74 74 PRO PRO A . n
A 1 28 ARG 28 75 75 ARG ARG A . n
A 1 29 LYS 29 76 76 LYS LYS A . n
A 1 30 LYS 30 77 77 LYS LYS A . n
A 1 31 ARG 31 78 78 ARG ARG A . n
A 1 32 PRO 32 79 79 PRO PRO A . n
A 1 33 GLU 33 80 80 GLU GLU A . n
A 1 34 ASP 34 81 81 ASP ASP A . n
A 1 35 PHE 35 82 82 PHE PHE A . n
A 1 36 LYS 36 83 83 LYS LYS A . n
A 1 37 PHE 37 84 84 PHE PHE A . n
A 1 38 GLY 38 85 85 GLY GLY A . n
A 1 39 LYS 39 86 86 LYS LYS A . n
A 1 40 ILE 40 87 87 ILE ILE A . n
A 1 41 LEU 41 88 88 LEU LEU A . n
A 1 42 GLY 42 89 89 GLY GLY A . n
A 1 43 GLU 43 90 90 GLU GLU A . n
A 1 44 GLY 44 91 91 GLY GLY A . n
A 1 45 SER 45 92 92 SER SER A . n
A 1 46 PHE 46 93 93 PHE PHE A . n
A 1 47 SER 47 94 94 SER SER A . n
A 1 48 THR 48 95 95 THR THR A . n
A 1 49 VAL 49 96 96 VAL VAL A . n
A 1 50 VAL 50 97 97 VAL VAL A . n
A 1 51 LEU 51 98 98 LEU LEU A . n
A 1 52 ALA 52 99 99 ALA ALA A . n
A 1 53 ARG 53 100 100 ARG ARG A . n
A 1 54 GLU 54 101 101 GLU GLU A . n
A 1 55 LEU 55 102 102 LEU LEU A . n
A 1 56 ALA 56 103 103 ALA ALA A . n
A 1 57 THR 57 104 104 THR THR A . n
A 1 58 SER 58 105 105 SER SER A . n
A 1 59 ARG 59 106 106 ARG ARG A . n
A 1 60 GLU 60 107 107 GLU GLU A . n
A 1 61 TYR 61 108 108 TYR TYR A . n
A 1 62 ALA 62 109 109 ALA ALA A . n
A 1 63 ILE 63 110 110 ILE ILE A . n
A 1 64 LYS 64 111 111 LYS LYS A . n
A 1 65 ILE 65 112 112 ILE ILE A . n
A 1 66 LEU 66 113 113 LEU LEU A . n
A 1 67 GLU 67 114 114 GLU GLU A . n
A 1 68 LYS 68 115 115 LYS LYS A . n
A 1 69 ARG 69 116 116 ARG ARG A . n
A 1 70 HIS 70 117 117 HIS HIS A . n
A 1 71 ILE 71 118 118 ILE ILE A . n
A 1 72 ILE 72 119 119 ILE ILE A . n
A 1 73 LYS 73 120 120 LYS LYS A . n
A 1 74 GLU 74 121 121 GLU GLU A . n
A 1 75 ASN 75 122 122 ASN ASN A . n
A 1 76 LYS 76 123 123 LYS LYS A . n
A 1 77 VAL 77 124 124 VAL VAL A . n
A 1 78 PRO 78 125 125 PRO PRO A . n
A 1 79 TYR 79 126 126 TYR TYR A . n
A 1 80 VAL 80 127 127 VAL VAL A . n
A 1 81 THR 81 128 128 THR THR A . n
A 1 82 ARG 82 129 129 ARG ARG A . n
A 1 83 GLU 83 130 130 GLU GLU A . n
A 1 84 ARG 84 131 131 ARG ARG A . n
A 1 85 ASP 85 132 132 ASP ASP A . n
A 1 86 VAL 86 133 133 VAL VAL A . n
A 1 87 MET 87 134 134 MET MET A . n
A 1 88 SER 88 135 135 SER SER A . n
A 1 89 ARG 89 136 136 ARG ARG A . n
A 1 90 LEU 90 137 137 LEU LEU A . n
A 1 91 ASP 91 138 138 ASP ASP A . n
A 1 92 HIS 92 139 139 HIS HIS A . n
A 1 93 PRO 93 140 140 PRO PRO A . n
A 1 94 PHE 94 141 141 PHE PHE A . n
A 1 95 PHE 95 142 142 PHE PHE A . n
A 1 96 VAL 96 143 143 VAL VAL A . n
A 1 97 LYS 97 144 144 LYS LYS A . n
A 1 98 LEU 98 145 145 LEU LEU A . n
A 1 99 TYR 99 146 146 TYR TYR A . n
A 1 100 PHE 100 147 147 PHE PHE A . n
A 1 101 THR 101 148 148 THR THR A . n
A 1 102 PHE 102 149 149 PHE PHE A . n
A 1 103 GLN 103 150 150 GLN GLN A . n
A 1 104 ASP 104 151 151 ASP ASP A . n
A 1 105 ASP 105 152 152 ASP ASP A . n
A 1 106 GLU 106 153 153 GLU GLU A . n
A 1 107 LYS 107 154 154 LYS LYS A . n
A 1 108 LEU 108 155 155 LEU LEU A . n
A 1 109 TYR 109 156 156 TYR TYR A . n
A 1 110 PHE 110 157 157 PHE PHE A . n
A 1 111 GLY 111 158 158 GLY GLY A . n
A 1 112 LEU 112 159 159 LEU LEU A . n
A 1 113 SER 113 160 160 SER SER A . n
A 1 114 TYR 114 161 161 TYR TYR A . n
A 1 115 ALA 115 162 162 ALA ALA A . n
A 1 116 LYS 116 163 163 LYS LYS A . n
A 1 117 ASN 117 164 164 ASN ASN A . n
A 1 118 GLY 118 165 165 GLY GLY A . n
A 1 119 GLU 119 166 166 GLU GLU A . n
A 1 120 LEU 120 167 167 LEU LEU A . n
A 1 121 LEU 121 168 168 LEU LEU A . n
A 1 122 LYS 122 169 169 LYS LYS A . n
A 1 123 TYR 123 170 170 TYR TYR A . n
A 1 124 ILE 124 171 171 ILE ILE A . n
A 1 125 ARG 125 172 172 ARG ARG A . n
A 1 126 LYS 126 173 173 LYS LYS A . n
A 1 127 ILE 127 174 174 ILE ILE A . n
A 1 128 GLY 128 175 175 GLY GLY A . n
A 1 129 SER 129 176 176 SER SER A . n
A 1 130 PHE 130 177 177 PHE PHE A . n
A 1 131 ASP 131 178 178 ASP ASP A . n
A 1 132 GLU 132 179 179 GLU GLU A . n
A 1 133 THR 133 180 180 THR THR A . n
A 1 134 CYS 134 181 181 CYS CYS A . n
A 1 135 THR 135 182 182 THR THR A . n
A 1 136 ARG 136 183 183 ARG ARG A . n
A 1 137 PHE 137 184 184 PHE PHE A . n
A 1 138 TYR 138 185 185 TYR TYR A . n
A 1 139 THR 139 186 186 THR THR A . n
A 1 140 ALA 140 187 187 ALA ALA A . n
A 1 141 GLU 141 188 188 GLU GLU A . n
A 1 142 ILE 142 189 189 ILE ILE A . n
A 1 143 VAL 143 190 190 VAL VAL A . n
A 1 144 SER 144 191 191 SER SER A . n
A 1 145 ALA 145 192 192 ALA ALA A . n
A 1 146 LEU 146 193 193 LEU LEU A . n
A 1 147 GLU 147 194 194 GLU GLU A . n
A 1 148 TYR 148 195 195 TYR TYR A . n
A 1 149 LEU 149 196 196 LEU LEU A . n
A 1 150 HIS 150 197 197 HIS HIS A . n
A 1 151 GLY 151 198 198 GLY GLY A . n
A 1 152 LYS 152 199 199 LYS LYS A . n
A 1 153 GLY 153 200 200 GLY GLY A . n
A 1 154 ILE 154 201 201 ILE ILE A . n
A 1 155 ILE 155 202 202 ILE ILE A . n
A 1 156 HIS 156 203 203 HIS HIS A . n
A 1 157 ARG 157 204 204 ARG ARG A . n
A 1 158 ASP 158 205 205 ASP ASP A . n
A 1 159 LEU 159 206 206 LEU LEU A . n
A 1 160 LYS 160 207 207 LYS LYS A . n
A 1 161 PRO 161 208 208 PRO PRO A . n
A 1 162 GLU 162 209 209 GLU GLU A . n
A 1 163 ASN 163 210 210 ASN ASN A . n
A 1 164 ILE 164 211 211 ILE ILE A . n
A 1 165 LEU 165 212 212 LEU LEU A . n
A 1 166 LEU 166 213 213 LEU LEU A . n
A 1 167 ASN 167 214 214 ASN ASN A . n
A 1 168 GLU 168 215 215 GLU GLU A . n
A 1 169 ASP 169 216 216 ASP ASP A . n
A 1 170 MET 170 217 217 MET MET A . n
A 1 171 HIS 171 218 218 HIS HIS A . n
A 1 172 ILE 172 219 219 ILE ILE A . n
A 1 173 GLN 173 220 220 GLN GLN A . n
A 1 174 ILE 174 221 221 ILE ILE A . n
A 1 175 THR 175 222 222 THR THR A . n
A 1 176 ASP 176 223 223 ASP ASP A . n
A 1 177 PHE 177 224 224 PHE PHE A . n
A 1 178 GLY 178 225 225 GLY GLY A . n
A 1 179 THR 179 226 226 THR THR A . n
A 1 180 ALA 180 227 227 ALA ALA A . n
A 1 181 LYS 181 228 228 LYS LYS A . n
A 1 182 VAL 182 229 229 VAL VAL A . n
A 1 183 LEU 183 230 230 LEU LEU A . n
A 1 184 SER 184 231 231 SER SER A . n
A 1 185 PRO 185 232 ? ? ? A . n
A 1 186 GLU 186 233 ? ? ? A . n
A 1 187 SER 187 234 ? ? ? A . n
A 1 188 LYS 188 235 ? ? ? A . n
A 1 189 GLN 189 236 ? ? ? A . n
A 1 190 ALA 190 237 ? ? ? A . n
A 1 191 ARG 191 238 ? ? ? A . n
A 1 192 ALA 192 239 ? ? ? A . n
A 1 193 ASN 193 240 ? ? ? A . n
A 1 194 SEP 194 241 ? ? ? A . n
A 1 195 PHE 195 242 ? ? ? A . n
A 1 196 VAL 196 243 ? ? ? A . n
A 1 197 GLY 197 244 244 GLY GLY A . n
A 1 198 THR 198 245 245 THR THR A . n
A 1 199 ALA 199 246 246 ALA ALA A . n
A 1 200 GLN 200 247 247 GLN GLN A . n
A 1 201 TYR 201 248 248 TYR TYR A . n
A 1 202 VAL 202 249 249 VAL VAL A . n
A 1 203 SER 203 250 250 SER SER A . n
A 1 204 PRO 204 251 251 PRO PRO A . n
A 1 205 GLU 205 252 252 GLU GLU A . n
A 1 206 LEU 206 253 253 LEU LEU A . n
A 1 207 LEU 207 254 254 LEU LEU A . n
A 1 208 THR 208 255 255 THR THR A . n
A 1 209 GLU 209 256 256 GLU GLU A . n
A 1 210 LYS 210 257 257 LYS LYS A . n
A 1 211 SER 211 258 258 SER SER A . n
A 1 212 ALA 212 259 259 ALA ALA A . n
A 1 213 CYS 213 260 260 CYS CYS A . n
A 1 214 LYS 214 261 261 LYS LYS A . n
A 1 215 SER 215 262 262 SER SER A . n
A 1 216 SER 216 263 263 SER SER A . n
A 1 217 ASP 217 264 264 ASP ASP A . n
A 1 218 LEU 218 265 265 LEU LEU A . n
A 1 219 TRP 219 266 266 TRP TRP A . n
A 1 220 ALA 220 267 267 ALA ALA A . n
A 1 221 LEU 221 268 268 LEU LEU A . n
A 1 222 GLY 222 269 269 GLY GLY A . n
A 1 223 CYS 223 270 270 CYS CYS A . n
A 1 224 ILE 224 271 271 ILE ILE A . n
A 1 225 ILE 225 272 272 ILE ILE A . n
A 1 226 TYR 226 273 273 TYR TYR A . n
A 1 227 GLN 227 274 274 GLN GLN A . n
A 1 228 LEU 228 275 275 LEU LEU A . n
A 1 229 VAL 229 276 276 VAL VAL A . n
A 1 230 ALA 230 277 277 ALA ALA A . n
A 1 231 GLY 231 278 278 GLY GLY A . n
A 1 232 LEU 232 279 279 LEU LEU A . n
A 1 233 PRO 233 280 280 PRO PRO A . n
A 1 234 PRO 234 281 281 PRO PRO A . n
A 1 235 PHE 235 282 282 PHE PHE A . n
A 1 236 ARG 236 283 283 ARG ARG A . n
A 1 237 ALA 237 284 284 ALA ALA A . n
A 1 238 GLY 238 285 285 GLY GLY A . n
A 1 239 ASN 239 286 286 ASN ASN A . n
A 1 240 GLU 240 287 287 GLU GLU A . n
A 1 241 TYR 241 288 288 TYR TYR A . n
A 1 242 LEU 242 289 289 LEU LEU A . n
A 1 243 ILE 243 290 290 ILE ILE A . n
A 1 244 PHE 244 291 291 PHE PHE A . n
A 1 245 GLN 245 292 292 GLN GLN A . n
A 1 246 LYS 246 293 293 LYS LYS A . n
A 1 247 ILE 247 294 294 ILE ILE A . n
A 1 248 ILE 248 295 295 ILE ILE A . n
A 1 249 LYS 249 296 296 LYS LYS A . n
A 1 250 LEU 250 297 297 LEU LEU A . n
A 1 251 GLU 251 298 298 GLU GLU A . n
A 1 252 TYR 252 299 299 TYR TYR A . n
A 1 253 ASP 253 300 300 ASP ASP A . n
A 1 254 PHE 254 301 301 PHE PHE A . n
A 1 255 PRO 255 302 302 PRO PRO A . n
A 1 256 GLU 256 303 303 GLU GLU A . n
A 1 257 LYS 257 304 304 LYS LYS A . n
A 1 258 PHE 258 305 305 PHE PHE A . n
A 1 259 PHE 259 306 306 PHE PHE A . n
A 1 260 PRO 260 307 307 PRO PRO A . n
A 1 261 LYS 261 308 308 LYS LYS A . n
A 1 262 ALA 262 309 309 ALA ALA A . n
A 1 263 ARG 263 310 310 ARG ARG A . n
A 1 264 ASP 264 311 311 ASP ASP A . n
A 1 265 LEU 265 312 312 LEU LEU A . n
A 1 266 VAL 266 313 313 VAL VAL A . n
A 1 267 GLU 267 314 314 GLU GLU A . n
A 1 268 LYS 268 315 315 LYS LYS A . n
A 1 269 LEU 269 316 316 LEU LEU A . n
A 1 270 LEU 270 317 317 LEU LEU A . n
A 1 271 VAL 271 318 318 VAL VAL A . n
A 1 272 LEU 272 319 319 LEU LEU A . n
A 1 273 ASP 273 320 320 ASP ASP A . n
A 1 274 ALA 274 321 321 ALA ALA A . n
A 1 275 THR 275 322 322 THR THR A . n
A 1 276 LYS 276 323 323 LYS LYS A . n
A 1 277 ARG 277 324 324 ARG ARG A . n
A 1 278 LEU 278 325 325 LEU LEU A . n
A 1 279 GLY 279 326 326 GLY GLY A . n
A 1 280 CYS 280 327 327 CYS CYS A . n
A 1 281 GLU 281 328 328 GLU GLU A . n
A 1 282 GLU 282 329 329 GLU GLU A . n
A 1 283 MET 283 330 330 MET MET A . n
A 1 284 GLU 284 331 331 GLU GLU A . n
A 1 285 GLY 285 332 332 GLY GLY A . n
A 1 286 TYR 286 333 333 TYR TYR A . n
A 1 287 GLY 287 334 334 GLY GLY A . n
A 1 288 PRO 288 335 335 PRO PRO A . n
A 1 289 LEU 289 336 336 LEU LEU A . n
A 1 290 LYS 290 337 337 LYS LYS A . n
A 1 291 ALA 291 338 338 ALA ALA A . n
A 1 292 HIS 292 339 339 HIS HIS A . n
A 1 293 PRO 293 340 340 PRO PRO A . n
A 1 294 PHE 294 341 341 PHE PHE A . n
A 1 295 PHE 295 342 342 PHE PHE A . n
A 1 296 GLU 296 343 343 GLU GLU A . n
A 1 297 SER 297 344 344 SER SER A . n
A 1 298 VAL 298 345 345 VAL VAL A . n
A 1 299 THR 299 346 346 THR THR A . n
A 1 300 TRP 300 347 347 TRP TRP A . n
A 1 301 GLU 301 348 348 GLU GLU A . n
A 1 302 ASN 302 349 349 ASN ASN A . n
A 1 303 LEU 303 350 350 LEU LEU A . n
A 1 304 HIS 304 351 351 HIS HIS A . n
A 1 305 GLN 305 352 352 GLN GLN A . n
A 1 306 GLN 306 353 353 GLN GLN A . n
A 1 307 THR 307 354 354 THR THR A . n
A 1 308 PRO 308 355 355 PRO PRO A . n
A 1 309 PRO 309 356 356 PRO PRO A . n
A 1 310 LYS 310 357 357 LYS LYS A . n
A 1 311 LEU 311 358 358 LEU LEU A . n
A 1 312 THR 312 359 ? ? ? A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 3Q6 1 360 359 3Q6 3Q6 A .
C 3 SO4 1 1 1 SO4 SO4 A .
D 4 HOH 1 2 2 HOH HOH A .
D 4 HOH 2 3 3 HOH HOH A .
D 4 HOH 3 4 4 HOH HOH A .
D 4 HOH 4 5 5 HOH HOH A .
D 4 HOH 5 6 6 HOH HOH A .
D 4 HOH 6 7 7 HOH HOH A .
D 4 HOH 7 8 8 HOH HOH A .
D 4 HOH 8 9 9 HOH HOH A .
D 4 HOH 9 10 10 HOH HOH A .
D 4 HOH 10 11 11 HOH HOH A .
D 4 HOH 11 12 12 HOH HOH A .
D 4 HOH 12 13 13 HOH HOH A .
D 4 HOH 13 14 14 HOH HOH A .
D 4 HOH 14 15 15 HOH HOH A .
D 4 HOH 15 16 16 HOH HOH A .
D 4 HOH 16 17 17 HOH HOH A .
D 4 HOH 17 18 18 HOH HOH A .
D 4 HOH 18 19 19 HOH HOH A .
D 4 HOH 19 20 20 HOH HOH A .
D 4 HOH 20 21 21 HOH HOH A .
D 4 HOH 21 22 22 HOH HOH A .
D 4 HOH 22 23 23 HOH HOH A .
D 4 HOH 23 24 24 HOH HOH A .
D 4 HOH 24 25 25 HOH HOH A .
D 4 HOH 25 26 26 HOH HOH A .
D 4 HOH 26 361 1 HOH HOH A .
#
loop_
_pdbx_unobs_or_zero_occ_atoms.id
_pdbx_unobs_or_zero_occ_atoms.PDB_model_num
_pdbx_unobs_or_zero_occ_atoms.polymer_flag
_pdbx_unobs_or_zero_occ_atoms.occupancy_flag
_pdbx_unobs_or_zero_occ_atoms.auth_asym_id
_pdbx_unobs_or_zero_occ_atoms.auth_comp_id
_pdbx_unobs_or_zero_occ_atoms.auth_seq_id
_pdbx_unobs_or_zero_occ_atoms.PDB_ins_code
_pdbx_unobs_or_zero_occ_atoms.auth_atom_id
_pdbx_unobs_or_zero_occ_atoms.label_alt_id
_pdbx_unobs_or_zero_occ_atoms.label_asym_id
_pdbx_unobs_or_zero_occ_atoms.label_comp_id
_pdbx_unobs_or_zero_occ_atoms.label_seq_id
_pdbx_unobs_or_zero_occ_atoms.label_atom_id
1 1 Y 1 A GLN 73 ? CG ? A GLN 26 CG
2 1 Y 1 A GLN 73 ? CD ? A GLN 26 CD
3 1 Y 1 A GLN 73 ? OE1 ? A GLN 26 OE1
4 1 Y 1 A GLN 73 ? NE2 ? A GLN 26 NE2
5 1 Y 1 A ARG 75 ? CG ? A ARG 28 CG
6 1 Y 1 A ARG 75 ? CD ? A ARG 28 CD
7 1 Y 1 A ARG 75 ? NE ? A ARG 28 NE
8 1 Y 1 A ARG 75 ? CZ ? A ARG 28 CZ
9 1 Y 1 A ARG 75 ? NH1 ? A ARG 28 NH1
10 1 Y 1 A ARG 75 ? NH2 ? A ARG 28 NH2
11 1 Y 1 A GLU 303 ? CG ? A GLU 256 CG
12 1 Y 1 A GLU 303 ? CD ? A GLU 256 CD
13 1 Y 1 A GLU 303 ? OE1 ? A GLU 256 OE1
14 1 Y 1 A GLU 303 ? OE2 ? A GLU 256 OE2
15 1 Y 1 A LYS 304 ? CG ? A LYS 257 CG
16 1 Y 1 A LYS 304 ? CD ? A LYS 257 CD
17 1 Y 1 A LYS 304 ? CE ? A LYS 257 CE
18 1 Y 1 A LYS 304 ? NZ ? A LYS 257 NZ
19 1 Y 1 A GLU 348 ? CG ? A GLU 301 CG
20 1 Y 1 A GLU 348 ? CD ? A GLU 301 CD
21 1 Y 1 A GLU 348 ? OE1 ? A GLU 301 OE1
22 1 Y 1 A GLU 348 ? OE2 ? A GLU 301 OE2
23 1 Y 1 A LYS 357 ? CG ? A LYS 310 CG
24 1 Y 1 A LYS 357 ? CD ? A LYS 310 CD
25 1 Y 1 A LYS 357 ? CE ? A LYS 310 CE
26 1 Y 1 A LYS 357 ? NZ ? A LYS 310 NZ
#
loop_
_software.pdbx_ordinal
_software.name
_software.version
_software.date
_software.type
_software.contact_author
_software.contact_author_email
_software.classification
_software.location
_software.language
_software.citation_id
1 DENZO . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction'
http://www.hkl-xray.com/ ? ?
2 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling'
http://www.hkl-xray.com/ ? ?
3 PHENIX 1.5_2 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement
http://www.phenix-online.org/ C++ ?
4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction'
http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ?
#
_cell.length_a 124.315
_cell.length_b 124.315
_cell.length_c 47.017
_cell.angle_alpha 90.000
_cell.angle_beta 90.000
_cell.angle_gamma 120.000
_cell.entry_id 3QD4
_cell.pdbx_unique_axis ?
_cell.Z_PDB 6
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.space_group_name_H-M 'P 32 2 1'
_symmetry.entry_id 3QD4
_symmetry.Int_Tables_number 154
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.space_group_name_Hall ?
#
_exptl.crystals_number 1
_exptl.entry_id 3QD4
_exptl.method 'X-RAY DIFFRACTION'
#
_exptl_crystal.id 1
_exptl_crystal.density_Matthews 2.94
_exptl_crystal.density_meas ?
_exptl_crystal.density_percent_sol 58.19
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP'
_exptl_crystal_grow.pH 9
_exptl_crystal_grow.temp 293
_exptl_crystal_grow.pdbx_details
;1.9-2 M ammonium sulfate,0.1 M tris pH 9. and 5mM ATP; 15-30% glycerol plus mother liquor mixed with inhibitor served as the cryo-protectant before being frozen in liquid nitrogen, Vapor diffusion. sitting drop, temperature 293K
;
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.id 1
_diffrn.ambient_temp 110
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type 'MARMOSAIC 225 mm CCD'
_diffrn_detector.pdbx_collection_date 2009-10-12
_diffrn_detector.details diamond
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.monochromator diamond
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.97872
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'APS BEAMLINE 21-ID-G'
_diffrn_source.pdbx_wavelength_list 0.97872
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_site APS
_diffrn_source.pdbx_synchrotron_beamline 21-ID-G
#
_reflns.entry_id 3QD4
_reflns.d_resolution_high 2.300
_reflns.d_resolution_low 30.000
_reflns.number_obs 18792
_reflns.pdbx_Rmerge_I_obs 0.078
_reflns.pdbx_netI_over_sigmaI 9.300
_reflns.pdbx_chi_squared 1.010
_reflns.pdbx_redundancy 7.100
_reflns.percent_possible_obs 99.900
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I ?
_reflns.number_all ?
_reflns.pdbx_Rsym_value ?
_reflns.B_iso_Wilson_estimate ?
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
loop_
_reflns_shell.d_res_high
_reflns_shell.d_res_low
_reflns_shell.number_measured_obs
_reflns_shell.number_measured_all
_reflns_shell.number_unique_obs
_reflns_shell.Rmerge_I_obs
_reflns_shell.meanI_over_sigI_obs
_reflns_shell.pdbx_Rsym_value
_reflns_shell.pdbx_chi_squared
_reflns_shell.pdbx_redundancy
_reflns_shell.percent_possible_obs
_reflns_shell.number_unique_all
_reflns_shell.percent_possible_all
_reflns_shell.pdbx_diffrn_id
_reflns_shell.pdbx_ordinal
2.300 2.380 ? ? ? 0.582 ? ? 0.993 6.500 ? 1855 100.000 ? 1
2.380 2.480 ? ? ? 0.445 ? ? 0.963 6.700 ? 1881 100.000 ? 2
2.480 2.590 ? ? ? 0.375 ? ? 0.980 6.900 ? 1853 100.000 ? 3
2.590 2.730 ? ? ? 0.285 ? ? 1.029 7.000 ? 1865 100.000 ? 4
2.730 2.900 ? ? ? 0.189 ? ? 1.030 7.200 ? 1852 100.000 ? 5
2.900 3.120 ? ? ? 0.137 ? ? 1.027 7.300 ? 1870 100.000 ? 6
3.120 3.430 ? ? ? 0.094 ? ? 1.024 7.500 ? 1872 100.000 ? 7
3.430 3.930 ? ? ? 0.062 ? ? 1.020 7.400 ? 1894 100.000 ? 8
3.930 4.950 ? ? ? 0.040 ? ? 1.016 7.300 ? 1897 99.500 ? 9
4.950 30.000 ? ? ? 0.037 ? ? 1.011 7.100 ? 1953 99.400 ? 10
#
_refine.entry_id 3QD4
_refine.ls_d_res_high 2.3000
_refine.ls_d_res_low 29.8590
_refine.pdbx_ls_sigma_F 0.050
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.ls_percent_reflns_obs 95.3200
_refine.ls_number_reflns_obs 17921
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_cross_valid_method ?
_refine.pdbx_R_Free_selection_details ?
_refine.details ?
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs 0.1989
_refine.ls_R_factor_R_work 0.1940
_refine.ls_wR_factor_R_work ?
_refine.ls_R_factor_R_free 0.2439
_refine.ls_wR_factor_R_free ?
_refine.ls_percent_reflns_R_free 10.0200
_refine.ls_number_reflns_R_free 1795
_refine.ls_R_factor_R_free_error ?
_refine.B_iso_mean 39.7667
_refine.solvent_model_param_bsol 33.3400
_refine.solvent_model_param_ksol 0.3520
_refine.pdbx_isotropic_thermal_model ?
_refine.aniso_B[1][1] -0.0821
_refine.aniso_B[2][2] -0.0821
_refine.aniso_B[3][3] 0.1643
_refine.aniso_B[1][2] 0.0000
_refine.aniso_B[1][3] 0.0000
_refine.aniso_B[2][3] 0.0000
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML 0.2800
_refine.overall_SU_B ?
_refine.solvent_model_details 'FLAT BULK SOLVENT MODEL'
_refine.pdbx_solvent_vdw_probe_radii 1.1100
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii 0.9000
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_stereochemistry_target_values ML
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.overall_FOM_work_R_set ?
_refine.B_iso_max 95.010
_refine.B_iso_min 23.260
_refine.occupancy_max 1.000
_refine.occupancy_min 0.160
_refine.pdbx_ls_sigma_I ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_R_factor_R_free_error_details ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.overall_FOM_free_R_set ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 2229
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 37
_refine_hist.number_atoms_solvent 26
_refine_hist.number_atoms_total 2292
_refine_hist.d_res_high 2.3000
_refine_hist.d_res_low 29.8590
#
loop_
_refine_ls_restr.type
_refine_ls_restr.number
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
f_bond_d 2340 0.008 ? ? 'X-RAY DIFFRACTION' ?
f_angle_d 3166 1.218 ? ? 'X-RAY DIFFRACTION' ?
f_chiral_restr 344 0.089 ? ? 'X-RAY DIFFRACTION' ?
f_plane_restr 403 0.004 ? ? 'X-RAY DIFFRACTION' ?
f_dihedral_angle_d 860 16.356 ? ? 'X-RAY DIFFRACTION' ?
#
loop_
_refine_ls_shell.d_res_high
_refine_ls_shell.d_res_low
_refine_ls_shell.pdbx_total_number_of_bins_used
_refine_ls_shell.percent_reflns_obs
_refine_ls_shell.number_reflns_R_work
_refine_ls_shell.R_factor_all
_refine_ls_shell.R_factor_R_work
_refine_ls_shell.R_factor_R_free
_refine_ls_shell.percent_reflns_R_free
_refine_ls_shell.number_reflns_R_free
_refine_ls_shell.R_factor_R_free_error
_refine_ls_shell.number_reflns_all
_refine_ls_shell.number_reflns_obs
_refine_ls_shell.redundancy_reflns_obs
_refine_ls_shell.pdbx_refine_id
2.3000 2.3622 13 89.0000 1146 . 0.2319 0.3230 . 139 . 1285 . . 'X-RAY DIFFRACTION'
2.3622 2.4317 13 89.0000 1123 . 0.2083 0.3141 . 121 . 1244 . . 'X-RAY DIFFRACTION'
2.4317 2.5101 13 92.0000 1210 . 0.2125 0.2668 . 129 . 1339 . . 'X-RAY DIFFRACTION'
2.5101 2.5998 13 93.0000 1195 . 0.2144 0.2736 . 135 . 1330 . . 'X-RAY DIFFRACTION'
2.5998 2.7038 13 93.0000 1190 . 0.2078 0.2687 . 133 . 1323 . . 'X-RAY DIFFRACTION'
2.7038 2.8268 13 96.0000 1258 . 0.2131 0.2698 . 139 . 1397 . . 'X-RAY DIFFRACTION'
2.8268 2.9757 13 96.0000 1216 . 0.2099 0.2603 . 136 . 1352 . . 'X-RAY DIFFRACTION'
2.9757 3.1619 13 97.0000 1264 . 0.2132 0.2847 . 141 . 1405 . . 'X-RAY DIFFRACTION'
3.1619 3.4057 13 98.0000 1268 . 0.2095 0.2662 . 138 . 1406 . . 'X-RAY DIFFRACTION'
3.4057 3.7479 13 99.0000 1282 . 0.1939 0.2378 . 140 . 1422 . . 'X-RAY DIFFRACTION'
3.7479 4.2888 13 99.0000 1315 . 0.1591 0.2167 . 146 . 1461 . . 'X-RAY DIFFRACTION'
4.2888 5.3983 13 99.0000 1307 . 0.1639 0.2013 . 146 . 1453 . . 'X-RAY DIFFRACTION'
5.3983 29.8620 13 99.0000 1352 . 0.1993 0.2180 . 152 . 1504 . . 'X-RAY DIFFRACTION'
#
_struct.entry_id 3QD4
_struct.title
;Phosphoinositide-Dependent Kinase-1 (PDK1) kinase domain with 1,1-Dimethylethyl{(3R,5R)-1-[2-amino-6-(3-amino-1H-indazol-6-yl)-4-pyrimidinyl]-5-methyl-3-piperidinyl}carbamate
;
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 3QD4
_struct_keywords.text
;kinase domain, AGC kinase, signal tranduction, ATP & Phosphoinositide, Phosphorylation on S241, TRANSFERASE-TRANSFERASE INHIBITOR complex
;
_struct_keywords.pdbx_keywords 'TRANSFERASE/TRANSFERASE INHIBITOR'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 4 ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code PDPK1_HUMAN
_struct_ref.pdbx_db_accession O15530
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code
;GPAMDGTAAEPRPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV
TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK
PENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE
YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLT
;
_struct_ref.pdbx_align_begin 48
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 3QD4
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 312
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession O15530
_struct_ref_seq.db_align_beg 48
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 359
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 48
_struct_ref_seq.pdbx_auth_seq_align_end 359
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 1 ARG A 31 ? GLU A 33 ? ARG A 78 GLU A 80 5 ? 3
HELX_P HELX_P2 2 LYS A 68 ? GLU A 74 ? LYS A 115 GLU A 121 1 ? 7
HELX_P HELX_P3 3 LYS A 76 ? LEU A 90 ? LYS A 123 LEU A 137 1 ? 15
HELX_P HELX_P4 4 GLU A 119 ? GLY A 128 ? GLU A 166 GLY A 175 1 ? 10
HELX_P HELX_P5 5 ASP A 131 ? LYS A 152 ? ASP A 178 LYS A 199 1 ? 22
HELX_P HELX_P6 6 THR A 198 ? VAL A 202 ? THR A 245 VAL A 249 5 ? 5
HELX_P HELX_P7 7 SER A 203 ? LEU A 207 ? SER A 250 LEU A 254 5 ? 5
HELX_P HELX_P8 8 CYS A 213 ? GLY A 231 ? CYS A 260 GLY A 278 1 ? 19
HELX_P HELX_P9 9 ASN A 239 ? LEU A 250 ? ASN A 286 LEU A 297 1 ? 12
HELX_P HELX_P10 10 PHE A 259 ? LEU A 270 ? PHE A 306 LEU A 317 1 ? 12
HELX_P HELX_P11 11 ASP A 273 ? ARG A 277 ? ASP A 320 ARG A 324 5 ? 5
HELX_P HELX_P12 12 CYS A 280 ? GLU A 284 ? CYS A 327 GLU A 331 5 ? 5
HELX_P HELX_P13 13 GLY A 285 ? ALA A 291 ? GLY A 332 ALA A 338 1 ? 7
HELX_P HELX_P14 14 HIS A 292 ? GLU A 296 ? HIS A 339 GLU A 343 5 ? 5
HELX_P HELX_P15 15 ASN A 302 ? GLN A 306 ? ASN A 349 GLN A 353 5 ? 5
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
A ? 5 ?
B ? 2 ?
C ? 2 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
A 1 2 ? anti-parallel
A 2 3 ? anti-parallel
A 3 4 ? anti-parallel
A 4 5 ? anti-parallel
B 1 2 ? anti-parallel
C 1 2 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
A 1 PHE A 35 ? GLU A 43 ? PHE A 82 GLU A 90
A 2 THR A 48 ? GLU A 54 ? THR A 95 GLU A 101
A 3 GLU A 60 ? GLU A 67 ? GLU A 107 GLU A 114
A 4 LYS A 107 ? LEU A 112 ? LYS A 154 LEU A 159
A 5 LEU A 98 ? GLN A 103 ? LEU A 145 GLN A 150
B 1 ILE A 154 ? ILE A 155 ? ILE A 201 ILE A 202
B 2 LYS A 181 ? VAL A 182 ? LYS A 228 VAL A 229
C 1 ILE A 164 ? LEU A 166 ? ILE A 211 LEU A 213
C 2 ILE A 172 ? ILE A 174 ? ILE A 219 ILE A 221
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
A 1 2 N LEU A 41 ? N LEU A 88 O VAL A 49 ? O VAL A 96
A 2 3 N THR A 48 ? N THR A 95 O ILE A 65 ? O ILE A 112
A 3 4 N LEU A 66 ? N LEU A 113 O LEU A 108 ? O LEU A 155
A 4 5 O GLY A 111 ? O GLY A 158 N PHE A 100 ? N PHE A 147
B 1 2 N ILE A 155 ? N ILE A 202 O LYS A 181 ? O LYS A 228
C 1 2 N LEU A 165 ? N LEU A 212 O GLN A 173 ? O GLN A 220
#
_struct_site.id AC1
_struct_site.pdbx_evidence_code Software
_struct_site.pdbx_auth_asym_id A
_struct_site.pdbx_auth_comp_id SO4
_struct_site.pdbx_auth_seq_id 1
_struct_site.pdbx_auth_ins_code ?
_struct_site.pdbx_num_residues 2
_struct_site.details 'BINDING SITE FOR RESIDUE SO4 A 1'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 2 ARG A 59 ? ARG A 106 . ? 5_555 ?
2 AC1 2 HIS A 304 ? HIS A 351 . ? 1_555 ?
#
_pdbx_entry_details.entry_id 3QD4
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
_pdbx_entry_details.has_ligand_of_interest ?
_pdbx_entry_details.has_protein_modification N
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 ASP A 151 ? ? -113.42 -167.07
2 1 ARG A 204 ? ? 76.33 -7.40
3 1 ASP A 205 ? ? -148.50 36.86
4 1 ASP A 223 ? ? 72.99 75.84
5 1 GLU A 256 ? ? 169.33 -29.70
#
_pdbx_struct_special_symmetry.id 1
_pdbx_struct_special_symmetry.PDB_model_num 1
_pdbx_struct_special_symmetry.auth_asym_id A
_pdbx_struct_special_symmetry.auth_comp_id HOH
_pdbx_struct_special_symmetry.auth_seq_id 2
_pdbx_struct_special_symmetry.PDB_ins_code ?
_pdbx_struct_special_symmetry.label_asym_id D
_pdbx_struct_special_symmetry.label_comp_id HOH
_pdbx_struct_special_symmetry.label_seq_id .
#
loop_
_pdbx_unobs_or_zero_occ_residues.id
_pdbx_unobs_or_zero_occ_residues.PDB_model_num
_pdbx_unobs_or_zero_occ_residues.polymer_flag
_pdbx_unobs_or_zero_occ_residues.occupancy_flag
_pdbx_unobs_or_zero_occ_residues.auth_asym_id
_pdbx_unobs_or_zero_occ_residues.auth_comp_id
_pdbx_unobs_or_zero_occ_residues.auth_seq_id
_pdbx_unobs_or_zero_occ_residues.PDB_ins_code
_pdbx_unobs_or_zero_occ_residues.label_asym_id
_pdbx_unobs_or_zero_occ_residues.label_comp_id
_pdbx_unobs_or_zero_occ_residues.label_seq_id
1 1 Y 1 A GLY 48 ? A GLY 1
2 1 Y 1 A PRO 49 ? A PRO 2
3 1 Y 1 A ALA 50 ? A ALA 3
4 1 Y 1 A MET 51 ? A MET 4
5 1 Y 1 A ASP 52 ? A ASP 5
6 1 Y 1 A GLY 53 ? A GLY 6
7 1 Y 1 A THR 54 ? A THR 7
8 1 Y 1 A ALA 55 ? A ALA 8
9 1 Y 1 A ALA 56 ? A ALA 9
10 1 Y 1 A GLU 57 ? A GLU 10
11 1 Y 1 A PRO 58 ? A PRO 11
12 1 Y 1 A ARG 59 ? A ARG 12
13 1 Y 1 A PRO 60 ? A PRO 13
14 1 Y 1 A GLY 61 ? A GLY 14
15 1 Y 1 A ALA 62 ? A ALA 15
16 1 Y 1 A GLY 63 ? A GLY 16
17 1 Y 1 A SER 64 ? A SER 17
18 1 Y 1 A LEU 65 ? A LEU 18
19 1 Y 1 A GLN 66 ? A GLN 19
20 1 Y 1 A HIS 67 ? A HIS 20
21 1 Y 1 A ALA 68 ? A ALA 21
22 1 Y 1 A GLN 69 ? A GLN 22
23 1 Y 1 A PRO 70 ? A PRO 23
24 1 Y 1 A PRO 232 ? A PRO 185
25 1 Y 1 A GLU 233 ? A GLU 186
26 1 Y 1 A SER 234 ? A SER 187
27 1 Y 1 A LYS 235 ? A LYS 188
28 1 Y 1 A GLN 236 ? A GLN 189
29 1 Y 1 A ALA 237 ? A ALA 190
30 1 Y 1 A ARG 238 ? A ARG 191
31 1 Y 1 A ALA 239 ? A ALA 192
32 1 Y 1 A ASN 240 ? A ASN 193
33 1 Y 1 A SEP 241 ? A SEP 194
34 1 Y 1 A PHE 242 ? A PHE 195
35 1 Y 1 A VAL 243 ? A VAL 196
36 1 Y 1 A THR 359 ? A THR 312
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
3Q6 C1 C Y N 1
3Q6 C2 C Y N 2
3Q6 C3 C Y N 3
3Q6 C4 C Y N 4
3Q6 C5 C Y N 5
3Q6 C6 C Y N 6
3Q6 C7 C Y N 7
3Q6 C8 C Y N 8
3Q6 C9 C Y N 9
3Q6 C10 C Y N 10
3Q6 C11 C Y N 11
3Q6 C12 C N N 12
3Q6 C13 C N N 13
3Q6 C14 C N N 14
3Q6 C15 C N N 15
3Q6 C16 C N R 16
3Q6 C17 C N R 17
3Q6 C18 C N N 18
3Q6 C19 C N N 19
3Q6 C20 C N N 20
3Q6 C21 C N N 21
3Q6 C22 C N N 22
3Q6 N23 N Y N 23
3Q6 N24 N Y N 24
3Q6 N25 N Y N 25
3Q6 N26 N Y N 26
3Q6 N27 N N N 27
3Q6 N28 N N N 28
3Q6 N29 N N N 29
3Q6 N30 N N N 30
3Q6 O31 O N N 31
3Q6 O32 O N N 32
3Q6 H1 H N N 33
3Q6 H2 H N N 34
3Q6 H3 H N N 35
3Q6 H4 H N N 36
3Q6 H13 H N N 37
3Q6 H13A H N N 38
3Q6 H14 H N N 39
3Q6 H14A H N N 40
3Q6 H15 H N N 41
3Q6 H15A H N N 42
3Q6 H16 H N N 43
3Q6 H17 H N N 44
3Q6 H18 H N N 45
3Q6 H18A H N N 46
3Q6 H18B H N N 47
3Q6 H19 H N N 48
3Q6 H19A H N N 49
3Q6 H19B H N N 50
3Q6 H20 H N N 51
3Q6 H20A H N N 52
3Q6 H20B H N N 53
3Q6 H21 H N N 54
3Q6 H21A H N N 55
3Q6 H21B H N N 56
3Q6 HN28 H N N 57
3Q6 HN2A H N N 58
3Q6 HN29 H N N 59
3Q6 HN2B H N N 60
3Q6 HN30 H N N 61
3Q6 HN25 H N N 62
ALA N N N N 63
ALA CA C N S 64
ALA C C N N 65
ALA O O N N 66
ALA CB C N N 67
ALA OXT O N N 68
ALA H H N N 69
ALA H2 H N N 70
ALA HA H N N 71
ALA HB1 H N N 72
ALA HB2 H N N 73
ALA HB3 H N N 74
ALA HXT H N N 75
ARG N N N N 76
ARG CA C N S 77
ARG C C N N 78
ARG O O N N 79
ARG CB C N N 80
ARG CG C N N 81
ARG CD C N N 82
ARG NE N N N 83
ARG CZ C N N 84
ARG NH1 N N N 85
ARG NH2 N N N 86
ARG OXT O N N 87
ARG H H N N 88
ARG H2 H N N 89
ARG HA H N N 90
ARG HB2 H N N 91
ARG HB3 H N N 92
ARG HG2 H N N 93
ARG HG3 H N N 94
ARG HD2 H N N 95
ARG HD3 H N N 96
ARG HE H N N 97
ARG HH11 H N N 98
ARG HH12 H N N 99
ARG HH21 H N N 100
ARG HH22 H N N 101
ARG HXT H N N 102
ASN N N N N 103
ASN CA C N S 104
ASN C C N N 105
ASN O O N N 106
ASN CB C N N 107
ASN CG C N N 108
ASN OD1 O N N 109
ASN ND2 N N N 110
ASN OXT O N N 111
ASN H H N N 112
ASN H2 H N N 113
ASN HA H N N 114
ASN HB2 H N N 115
ASN HB3 H N N 116
ASN HD21 H N N 117
ASN HD22 H N N 118
ASN HXT H N N 119
ASP N N N N 120
ASP CA C N S 121
ASP C C N N 122
ASP O O N N 123
ASP CB C N N 124
ASP CG C N N 125
ASP OD1 O N N 126
ASP OD2 O N N 127
ASP OXT O N N 128
ASP H H N N 129
ASP H2 H N N 130
ASP HA H N N 131
ASP HB2 H N N 132
ASP HB3 H N N 133
ASP HD2 H N N 134
ASP HXT H N N 135
CYS N N N N 136
CYS CA C N R 137
CYS C C N N 138
CYS O O N N 139
CYS CB C N N 140
CYS SG S N N 141
CYS OXT O N N 142
CYS H H N N 143
CYS H2 H N N 144
CYS HA H N N 145
CYS HB2 H N N 146
CYS HB3 H N N 147
CYS HG H N N 148
CYS HXT H N N 149
GLN N N N N 150
GLN CA C N S 151
GLN C C N N 152
GLN O O N N 153
GLN CB C N N 154
GLN CG C N N 155
GLN CD C N N 156
GLN OE1 O N N 157
GLN NE2 N N N 158
GLN OXT O N N 159
GLN H H N N 160
GLN H2 H N N 161
GLN HA H N N 162
GLN HB2 H N N 163
GLN HB3 H N N 164
GLN HG2 H N N 165
GLN HG3 H N N 166
GLN HE21 H N N 167
GLN HE22 H N N 168
GLN HXT H N N 169
GLU N N N N 170
GLU CA C N S 171
GLU C C N N 172
GLU O O N N 173
GLU CB C N N 174
GLU CG C N N 175
GLU CD C N N 176
GLU OE1 O N N 177
GLU OE2 O N N 178
GLU OXT O N N 179
GLU H H N N 180
GLU H2 H N N 181
GLU HA H N N 182
GLU HB2 H N N 183
GLU HB3 H N N 184
GLU HG2 H N N 185
GLU HG3 H N N 186
GLU HE2 H N N 187
GLU HXT H N N 188
GLY N N N N 189
GLY CA C N N 190
GLY C C N N 191
GLY O O N N 192
GLY OXT O N N 193
GLY H H N N 194
GLY H2 H N N 195
GLY HA2 H N N 196
GLY HA3 H N N 197
GLY HXT H N N 198
HIS N N N N 199
HIS CA C N S 200
HIS C C N N 201
HIS O O N N 202
HIS CB C N N 203
HIS CG C Y N 204
HIS ND1 N Y N 205
HIS CD2 C Y N 206
HIS CE1 C Y N 207
HIS NE2 N Y N 208
HIS OXT O N N 209
HIS H H N N 210
HIS H2 H N N 211
HIS HA H N N 212
HIS HB2 H N N 213
HIS HB3 H N N 214
HIS HD1 H N N 215
HIS HD2 H N N 216
HIS HE1 H N N 217
HIS HE2 H N N 218
HIS HXT H N N 219
HOH O O N N 220
HOH H1 H N N 221
HOH H2 H N N 222
ILE N N N N 223
ILE CA C N S 224
ILE C C N N 225
ILE O O N N 226
ILE CB C N S 227
ILE CG1 C N N 228
ILE CG2 C N N 229
ILE CD1 C N N 230
ILE OXT O N N 231
ILE H H N N 232
ILE H2 H N N 233
ILE HA H N N 234
ILE HB H N N 235
ILE HG12 H N N 236
ILE HG13 H N N 237
ILE HG21 H N N 238
ILE HG22 H N N 239
ILE HG23 H N N 240
ILE HD11 H N N 241
ILE HD12 H N N 242
ILE HD13 H N N 243
ILE HXT H N N 244
LEU N N N N 245
LEU CA C N S 246
LEU C C N N 247
LEU O O N N 248
LEU CB C N N 249
LEU CG C N N 250
LEU CD1 C N N 251
LEU CD2 C N N 252
LEU OXT O N N 253
LEU H H N N 254
LEU H2 H N N 255
LEU HA H N N 256
LEU HB2 H N N 257
LEU HB3 H N N 258
LEU HG H N N 259
LEU HD11 H N N 260
LEU HD12 H N N 261
LEU HD13 H N N 262
LEU HD21 H N N 263
LEU HD22 H N N 264
LEU HD23 H N N 265
LEU HXT H N N 266
LYS N N N N 267
LYS CA C N S 268
LYS C C N N 269
LYS O O N N 270
LYS CB C N N 271
LYS CG C N N 272
LYS CD C N N 273
LYS CE C N N 274
LYS NZ N N N 275
LYS OXT O N N 276
LYS H H N N 277
LYS H2 H N N 278
LYS HA H N N 279
LYS HB2 H N N 280
LYS HB3 H N N 281
LYS HG2 H N N 282
LYS HG3 H N N 283
LYS HD2 H N N 284
LYS HD3 H N N 285
LYS HE2 H N N 286
LYS HE3 H N N 287
LYS HZ1 H N N 288
LYS HZ2 H N N 289
LYS HZ3 H N N 290
LYS HXT H N N 291
MET N N N N 292
MET CA C N S 293
MET C C N N 294
MET O O N N 295
MET CB C N N 296
MET CG C N N 297
MET SD S N N 298
MET CE C N N 299
MET OXT O N N 300
MET H H N N 301
MET H2 H N N 302
MET HA H N N 303
MET HB2 H N N 304
MET HB3 H N N 305
MET HG2 H N N 306
MET HG3 H N N 307
MET HE1 H N N 308
MET HE2 H N N 309
MET HE3 H N N 310
MET HXT H N N 311
PHE N N N N 312
PHE CA C N S 313
PHE C C N N 314
PHE O O N N 315
PHE CB C N N 316
PHE CG C Y N 317
PHE CD1 C Y N 318
PHE CD2 C Y N 319
PHE CE1 C Y N 320
PHE CE2 C Y N 321
PHE CZ C Y N 322
PHE OXT O N N 323
PHE H H N N 324
PHE H2 H N N 325
PHE HA H N N 326
PHE HB2 H N N 327
PHE HB3 H N N 328
PHE HD1 H N N 329
PHE HD2 H N N 330
PHE HE1 H N N 331
PHE HE2 H N N 332
PHE HZ H N N 333
PHE HXT H N N 334
PRO N N N N 335
PRO CA C N S 336
PRO C C N N 337
PRO O O N N 338
PRO CB C N N 339
PRO CG C N N 340
PRO CD C N N 341
PRO OXT O N N 342
PRO H H N N 343
PRO HA H N N 344
PRO HB2 H N N 345
PRO HB3 H N N 346
PRO HG2 H N N 347
PRO HG3 H N N 348
PRO HD2 H N N 349
PRO HD3 H N N 350
PRO HXT H N N 351
SEP N N N N 352
SEP CA C N S 353
SEP CB C N N 354
SEP OG O N N 355
SEP C C N N 356
SEP O O N N 357
SEP OXT O N N 358
SEP P P N N 359
SEP O1P O N N 360
SEP O2P O N N 361
SEP O3P O N N 362
SEP H H N N 363
SEP H2 H N N 364
SEP HA H N N 365
SEP HB2 H N N 366
SEP HB3 H N N 367
SEP HXT H N N 368
SEP HOP2 H N N 369
SEP HOP3 H N N 370
SER N N N N 371
SER CA C N S 372
SER C C N N 373
SER O O N N 374
SER CB C N N 375
SER OG O N N 376
SER OXT O N N 377
SER H H N N 378
SER H2 H N N 379
SER HA H N N 380
SER HB2 H N N 381
SER HB3 H N N 382
SER HG H N N 383
SER HXT H N N 384
SO4 S S N N 385
SO4 O1 O N N 386
SO4 O2 O N N 387
SO4 O3 O N N 388
SO4 O4 O N N 389
THR N N N N 390
THR CA C N S 391
THR C C N N 392
THR O O N N 393
THR CB C N R 394
THR OG1 O N N 395
THR CG2 C N N 396
THR OXT O N N 397
THR H H N N 398
THR H2 H N N 399
THR HA H N N 400
THR HB H N N 401
THR HG1 H N N 402
THR HG21 H N N 403
THR HG22 H N N 404
THR HG23 H N N 405
THR HXT H N N 406
TRP N N N N 407
TRP CA C N S 408
TRP C C N N 409
TRP O O N N 410
TRP CB C N N 411
TRP CG C Y N 412
TRP CD1 C Y N 413
TRP CD2 C Y N 414
TRP NE1 N Y N 415
TRP CE2 C Y N 416
TRP CE3 C Y N 417
TRP CZ2 C Y N 418
TRP CZ3 C Y N 419
TRP CH2 C Y N 420
TRP OXT O N N 421
TRP H H N N 422
TRP H2 H N N 423
TRP HA H N N 424
TRP HB2 H N N 425
TRP HB3 H N N 426
TRP HD1 H N N 427
TRP HE1 H N N 428
TRP HE3 H N N 429
TRP HZ2 H N N 430
TRP HZ3 H N N 431
TRP HH2 H N N 432
TRP HXT H N N 433
TYR N N N N 434
TYR CA C N S 435
TYR C C N N 436
TYR O O N N 437
TYR CB C N N 438
TYR CG C Y N 439
TYR CD1 C Y N 440
TYR CD2 C Y N 441
TYR CE1 C Y N 442
TYR CE2 C Y N 443
TYR CZ C Y N 444
TYR OH O N N 445
TYR OXT O N N 446
TYR H H N N 447
TYR H2 H N N 448
TYR HA H N N 449
TYR HB2 H N N 450
TYR HB3 H N N 451
TYR HD1 H N N 452
TYR HD2 H N N 453
TYR HE1 H N N 454
TYR HE2 H N N 455
TYR HH H N N 456
TYR HXT H N N 457
VAL N N N N 458
VAL CA C N S 459
VAL C C N N 460
VAL O O N N 461
VAL CB C N N 462
VAL CG1 C N N 463
VAL CG2 C N N 464
VAL OXT O N N 465
VAL H H N N 466
VAL H2 H N N 467
VAL HA H N N 468
VAL HB H N N 469
VAL HG11 H N N 470
VAL HG12 H N N 471
VAL HG13 H N N 472
VAL HG21 H N N 473
VAL HG22 H N N 474
VAL HG23 H N N 475
VAL HXT H N N 476
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
3Q6 C2 C1 doub Y N 1
3Q6 C5 C1 sing Y N 2
3Q6 C1 H1 sing N N 3
3Q6 C6 C2 sing Y N 4
3Q6 C2 H2 sing N N 5
3Q6 C3 C6 doub Y N 6
3Q6 C3 C7 sing Y N 7
3Q6 C3 H3 sing N N 8
3Q6 C9 C4 doub Y N 9
3Q6 C8 C4 sing Y N 10
3Q6 C4 H4 sing N N 11
3Q6 C7 C5 sing Y N 12
3Q6 C5 C10 doub Y N 13
3Q6 C8 C6 sing Y N 14
3Q6 N26 C7 doub Y N 15
3Q6 N23 C8 doub Y N 16
3Q6 N24 C9 sing Y N 17
3Q6 C9 N27 sing N N 18
3Q6 N25 C10 sing Y N 19
3Q6 C10 N28 sing N N 20
3Q6 N29 C11 sing N N 21
3Q6 C11 N24 doub Y N 22
3Q6 C11 N23 sing Y N 23
3Q6 O32 C12 sing N N 24
3Q6 N30 C12 sing N N 25
3Q6 C12 O31 doub N N 26
3Q6 C17 C13 sing N N 27
3Q6 C13 C16 sing N N 28
3Q6 C13 H13 sing N N 29
3Q6 C13 H13A sing N N 30
3Q6 N27 C14 sing N N 31
3Q6 C14 C16 sing N N 32
3Q6 C14 H14 sing N N 33
3Q6 C14 H14A sing N N 34
3Q6 C15 N27 sing N N 35
3Q6 C15 C17 sing N N 36
3Q6 C15 H15 sing N N 37
3Q6 C15 H15A sing N N 38
3Q6 C16 C18 sing N N 39
3Q6 C16 H16 sing N N 40
3Q6 N30 C17 sing N N 41
3Q6 C17 H17 sing N N 42
3Q6 C18 H18 sing N N 43
3Q6 C18 H18A sing N N 44
3Q6 C18 H18B sing N N 45
3Q6 C22 C19 sing N N 46
3Q6 C19 H19 sing N N 47
3Q6 C19 H19A sing N N 48
3Q6 C19 H19B sing N N 49
3Q6 C20 C22 sing N N 50
3Q6 C20 H20 sing N N 51
3Q6 C20 H20A sing N N 52
3Q6 C20 H20B sing N N 53
3Q6 C21 C22 sing N N 54
3Q6 C21 H21 sing N N 55
3Q6 C21 H21A sing N N 56
3Q6 C21 H21B sing N N 57
3Q6 O32 C22 sing N N 58
3Q6 N26 N25 sing Y N 59
3Q6 N28 HN28 sing N N 60
3Q6 N28 HN2A sing N N 61
3Q6 N29 HN29 sing N N 62
3Q6 N29 HN2B sing N N 63
3Q6 N30 HN30 sing N N 64
3Q6 N25 HN25 sing N N 65
ALA N CA sing N N 66
ALA N H sing N N 67
ALA N H2 sing N N 68
ALA CA C sing N N 69
ALA CA CB sing N N 70
ALA CA HA sing N N 71
ALA C O doub N N 72
ALA C OXT sing N N 73
ALA CB HB1 sing N N 74
ALA CB HB2 sing N N 75
ALA CB HB3 sing N N 76
ALA OXT HXT sing N N 77
ARG N CA sing N N 78
ARG N H sing N N 79
ARG N H2 sing N N 80
ARG CA C sing N N 81
ARG CA CB sing N N 82
ARG CA HA sing N N 83
ARG C O doub N N 84
ARG C OXT sing N N 85
ARG CB CG sing N N 86
ARG CB HB2 sing N N 87
ARG CB HB3 sing N N 88
ARG CG CD sing N N 89
ARG CG HG2 sing N N 90
ARG CG HG3 sing N N 91
ARG CD NE sing N N 92
ARG CD HD2 sing N N 93
ARG CD HD3 sing N N 94
ARG NE CZ sing N N 95
ARG NE HE sing N N 96
ARG CZ NH1 sing N N 97
ARG CZ NH2 doub N N 98
ARG NH1 HH11 sing N N 99
ARG NH1 HH12 sing N N 100
ARG NH2 HH21 sing N N 101
ARG NH2 HH22 sing N N 102
ARG OXT HXT sing N N 103
ASN N CA sing N N 104
ASN N H sing N N 105
ASN N H2 sing N N 106
ASN CA C sing N N 107
ASN CA CB sing N N 108
ASN CA HA sing N N 109
ASN C O doub N N 110
ASN C OXT sing N N 111
ASN CB CG sing N N 112
ASN CB HB2 sing N N 113
ASN CB HB3 sing N N 114
ASN CG OD1 doub N N 115
ASN CG ND2 sing N N 116
ASN ND2 HD21 sing N N 117
ASN ND2 HD22 sing N N 118
ASN OXT HXT sing N N 119
ASP N CA sing N N 120
ASP N H sing N N 121
ASP N H2 sing N N 122
ASP CA C sing N N 123
ASP CA CB sing N N 124
ASP CA HA sing N N 125
ASP C O doub N N 126
ASP C OXT sing N N 127
ASP CB CG sing N N 128
ASP CB HB2 sing N N 129
ASP CB HB3 sing N N 130
ASP CG OD1 doub N N 131
ASP CG OD2 sing N N 132
ASP OD2 HD2 sing N N 133
ASP OXT HXT sing N N 134
CYS N CA sing N N 135
CYS N H sing N N 136
CYS N H2 sing N N 137
CYS CA C sing N N 138
CYS CA CB sing N N 139
CYS CA HA sing N N 140
CYS C O doub N N 141
CYS C OXT sing N N 142
CYS CB SG sing N N 143
CYS CB HB2 sing N N 144
CYS CB HB3 sing N N 145
CYS SG HG sing N N 146
CYS OXT HXT sing N N 147
GLN N CA sing N N 148
GLN N H sing N N 149
GLN N H2 sing N N 150
GLN CA C sing N N 151
GLN CA CB sing N N 152
GLN CA HA sing N N 153
GLN C O doub N N 154
GLN C OXT sing N N 155
GLN CB CG sing N N 156
GLN CB HB2 sing N N 157
GLN CB HB3 sing N N 158
GLN CG CD sing N N 159
GLN CG HG2 sing N N 160
GLN CG HG3 sing N N 161
GLN CD OE1 doub N N 162
GLN CD NE2 sing N N 163
GLN NE2 HE21 sing N N 164
GLN NE2 HE22 sing N N 165
GLN OXT HXT sing N N 166
GLU N CA sing N N 167
GLU N H sing N N 168
GLU N H2 sing N N 169
GLU CA C sing N N 170
GLU CA CB sing N N 171
GLU CA HA sing N N 172
GLU C O doub N N 173
GLU C OXT sing N N 174
GLU CB CG sing N N 175
GLU CB HB2 sing N N 176
GLU CB HB3 sing N N 177
GLU CG CD sing N N 178
GLU CG HG2 sing N N 179
GLU CG HG3 sing N N 180
GLU CD OE1 doub N N 181
GLU CD OE2 sing N N 182
GLU OE2 HE2 sing N N 183
GLU OXT HXT sing N N 184
GLY N CA sing N N 185
GLY N H sing N N 186
GLY N H2 sing N N 187
GLY CA C sing N N 188
GLY CA HA2 sing N N 189
GLY CA HA3 sing N N 190
GLY C O doub N N 191
GLY C OXT sing N N 192
GLY OXT HXT sing N N 193
HIS N CA sing N N 194
HIS N H sing N N 195
HIS N H2 sing N N 196
HIS CA C sing N N 197
HIS CA CB sing N N 198
HIS CA HA sing N N 199
HIS C O doub N N 200
HIS C OXT sing N N 201
HIS CB CG sing N N 202
HIS CB HB2 sing N N 203
HIS CB HB3 sing N N 204
HIS CG ND1 sing Y N 205
HIS CG CD2 doub Y N 206
HIS ND1 CE1 doub Y N 207
HIS ND1 HD1 sing N N 208
HIS CD2 NE2 sing Y N 209
HIS CD2 HD2 sing N N 210
HIS CE1 NE2 sing Y N 211
HIS CE1 HE1 sing N N 212
HIS NE2 HE2 sing N N 213
HIS OXT HXT sing N N 214
HOH O H1 sing N N 215
HOH O H2 sing N N 216
ILE N CA sing N N 217
ILE N H sing N N 218
ILE N H2 sing N N 219
ILE CA C sing N N 220
ILE CA CB sing N N 221
ILE CA HA sing N N 222
ILE C O doub N N 223
ILE C OXT sing N N 224
ILE CB CG1 sing N N 225
ILE CB CG2 sing N N 226
ILE CB HB sing N N 227
ILE CG1 CD1 sing N N 228
ILE CG1 HG12 sing N N 229
ILE CG1 HG13 sing N N 230
ILE CG2 HG21 sing N N 231
ILE CG2 HG22 sing N N 232
ILE CG2 HG23 sing N N 233
ILE CD1 HD11 sing N N 234
ILE CD1 HD12 sing N N 235
ILE CD1 HD13 sing N N 236
ILE OXT HXT sing N N 237
LEU N CA sing N N 238
LEU N H sing N N 239
LEU N H2 sing N N 240
LEU CA C sing N N 241
LEU CA CB sing N N 242
LEU CA HA sing N N 243
LEU C O doub N N 244
LEU C OXT sing N N 245
LEU CB CG sing N N 246
LEU CB HB2 sing N N 247
LEU CB HB3 sing N N 248
LEU CG CD1 sing N N 249
LEU CG CD2 sing N N 250
LEU CG HG sing N N 251
LEU CD1 HD11 sing N N 252
LEU CD1 HD12 sing N N 253
LEU CD1 HD13 sing N N 254
LEU CD2 HD21 sing N N 255
LEU CD2 HD22 sing N N 256
LEU CD2 HD23 sing N N 257
LEU OXT HXT sing N N 258
LYS N CA sing N N 259
LYS N H sing N N 260
LYS N H2 sing N N 261
LYS CA C sing N N 262
LYS CA CB sing N N 263
LYS CA HA sing N N 264
LYS C O doub N N 265
LYS C OXT sing N N 266
LYS CB CG sing N N 267
LYS CB HB2 sing N N 268
LYS CB HB3 sing N N 269
LYS CG CD sing N N 270
LYS CG HG2 sing N N 271
LYS CG HG3 sing N N 272
LYS CD CE sing N N 273
LYS CD HD2 sing N N 274
LYS CD HD3 sing N N 275
LYS CE NZ sing N N 276
LYS CE HE2 sing N N 277
LYS CE HE3 sing N N 278
LYS NZ HZ1 sing N N 279
LYS NZ HZ2 sing N N 280
LYS NZ HZ3 sing N N 281
LYS OXT HXT sing N N 282
MET N CA sing N N 283
MET N H sing N N 284
MET N H2 sing N N 285
MET CA C sing N N 286
MET CA CB sing N N 287
MET CA HA sing N N 288
MET C O doub N N 289
MET C OXT sing N N 290
MET CB CG sing N N 291
MET CB HB2 sing N N 292
MET CB HB3 sing N N 293
MET CG SD sing N N 294
MET CG HG2 sing N N 295
MET CG HG3 sing N N 296
MET SD CE sing N N 297
MET CE HE1 sing N N 298
MET CE HE2 sing N N 299
MET CE HE3 sing N N 300
MET OXT HXT sing N N 301
PHE N CA sing N N 302
PHE N H sing N N 303
PHE N H2 sing N N 304
PHE CA C sing N N 305
PHE CA CB sing N N 306
PHE CA HA sing N N 307
PHE C O doub N N 308
PHE C OXT sing N N 309
PHE CB CG sing N N 310
PHE CB HB2 sing N N 311
PHE CB HB3 sing N N 312
PHE CG CD1 doub Y N 313
PHE CG CD2 sing Y N 314
PHE CD1 CE1 sing Y N 315
PHE CD1 HD1 sing N N 316
PHE CD2 CE2 doub Y N 317
PHE CD2 HD2 sing N N 318
PHE CE1 CZ doub Y N 319
PHE CE1 HE1 sing N N 320
PHE CE2 CZ sing Y N 321
PHE CE2 HE2 sing N N 322
PHE CZ HZ sing N N 323
PHE OXT HXT sing N N 324
PRO N CA sing N N 325
PRO N CD sing N N 326
PRO N H sing N N 327
PRO CA C sing N N 328
PRO CA CB sing N N 329
PRO CA HA sing N N 330
PRO C O doub N N 331
PRO C OXT sing N N 332
PRO CB CG sing N N 333
PRO CB HB2 sing N N 334
PRO CB HB3 sing N N 335
PRO CG CD sing N N 336
PRO CG HG2 sing N N 337
PRO CG HG3 sing N N 338
PRO CD HD2 sing N N 339
PRO CD HD3 sing N N 340
PRO OXT HXT sing N N 341
SEP N CA sing N N 342
SEP N H sing N N 343
SEP N H2 sing N N 344
SEP CA CB sing N N 345
SEP CA C sing N N 346
SEP CA HA sing N N 347
SEP CB OG sing N N 348
SEP CB HB2 sing N N 349
SEP CB HB3 sing N N 350
SEP OG P sing N N 351
SEP C O doub N N 352
SEP C OXT sing N N 353
SEP OXT HXT sing N N 354
SEP P O1P doub N N 355
SEP P O2P sing N N 356
SEP P O3P sing N N 357
SEP O2P HOP2 sing N N 358
SEP O3P HOP3 sing N N 359
SER N CA sing N N 360
SER N H sing N N 361
SER N H2 sing N N 362
SER CA C sing N N 363
SER CA CB sing N N 364
SER CA HA sing N N 365
SER C O doub N N 366
SER C OXT sing N N 367
SER CB OG sing N N 368
SER CB HB2 sing N N 369
SER CB HB3 sing N N 370
SER OG HG sing N N 371
SER OXT HXT sing N N 372
SO4 S O1 doub N N 373
SO4 S O2 doub N N 374
SO4 S O3 sing N N 375
SO4 S O4 sing N N 376
THR N CA sing N N 377
THR N H sing N N 378
THR N H2 sing N N 379
THR CA C sing N N 380
THR CA CB sing N N 381
THR CA HA sing N N 382
THR C O doub N N 383
THR C OXT sing N N 384
THR CB OG1 sing N N 385
THR CB CG2 sing N N 386
THR CB HB sing N N 387
THR OG1 HG1 sing N N 388
THR CG2 HG21 sing N N 389
THR CG2 HG22 sing N N 390
THR CG2 HG23 sing N N 391
THR OXT HXT sing N N 392
TRP N CA sing N N 393
TRP N H sing N N 394
TRP N H2 sing N N 395
TRP CA C sing N N 396
TRP CA CB sing N N 397
TRP CA HA sing N N 398
TRP C O doub N N 399
TRP C OXT sing N N 400
TRP CB CG sing N N 401
TRP CB HB2 sing N N 402
TRP CB HB3 sing N N 403
TRP CG CD1 doub Y N 404
TRP CG CD2 sing Y N 405
TRP CD1 NE1 sing Y N 406
TRP CD1 HD1 sing N N 407
TRP CD2 CE2 doub Y N 408
TRP CD2 CE3 sing Y N 409
TRP NE1 CE2 sing Y N 410
TRP NE1 HE1 sing N N 411
TRP CE2 CZ2 sing Y N 412
TRP CE3 CZ3 doub Y N 413
TRP CE3 HE3 sing N N 414
TRP CZ2 CH2 doub Y N 415
TRP CZ2 HZ2 sing N N 416
TRP CZ3 CH2 sing Y N 417
TRP CZ3 HZ3 sing N N 418
TRP CH2 HH2 sing N N 419
TRP OXT HXT sing N N 420
TYR N CA sing N N 421
TYR N H sing N N 422
TYR N H2 sing N N 423
TYR CA C sing N N 424
TYR CA CB sing N N 425
TYR CA HA sing N N 426
TYR C O doub N N 427
TYR C OXT sing N N 428
TYR CB CG sing N N 429
TYR CB HB2 sing N N 430
TYR CB HB3 sing N N 431
TYR CG CD1 doub Y N 432
TYR CG CD2 sing Y N 433
TYR CD1 CE1 sing Y N 434
TYR CD1 HD1 sing N N 435
TYR CD2 CE2 doub Y N 436
TYR CD2 HD2 sing N N 437
TYR CE1 CZ doub Y N 438
TYR CE1 HE1 sing N N 439
TYR CE2 CZ sing Y N 440
TYR CE2 HE2 sing N N 441
TYR CZ OH sing N N 442
TYR OH HH sing N N 443
TYR OXT HXT sing N N 444
VAL N CA sing N N 445
VAL N H sing N N 446
VAL N H2 sing N N 447
VAL CA C sing N N 448
VAL CA CB sing N N 449
VAL CA HA sing N N 450
VAL C O doub N N 451
VAL C OXT sing N N 452
VAL CB CG1 sing N N 453
VAL CB CG2 sing N N 454
VAL CB HB sing N N 455
VAL CG1 HG11 sing N N 456
VAL CG1 HG12 sing N N 457
VAL CG1 HG13 sing N N 458
VAL CG2 HG21 sing N N 459
VAL CG2 HG22 sing N N 460
VAL CG2 HG23 sing N N 461
VAL OXT HXT sing N N 462
#
_atom_sites.entry_id 3QD4
_atom_sites.fract_transf_matrix[1][1] 0.008044
_atom_sites.fract_transf_matrix[1][2] 0.004644
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.009289
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.021269
_atom_sites.fract_transf_vector[1] 0.000000
_atom_sites.fract_transf_vector[2] 0.000000
_atom_sites.fract_transf_vector[3] 0.000000
#
loop_
_atom_type.symbol
C
N
O
S
#
loop_