data_3QD5 # _entry.id 3QD5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.286 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3QD5 RCSB RCSB063494 WWPDB D_1000063494 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id CoimA.00584.a _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3QD5 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-01-17 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # _audit_author.name 'Seattle Structural Genomics Center for Infectious Disease (SSGCID)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Structural characterization of a ribose-5-phosphate isomerase B from the pathogenic fungus Coccidioides immitis.' _citation.journal_abbrev 'Bmc Struct.Biol.' _citation.journal_volume 11 _citation.page_first 39 _citation.page_last 39 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1472-6807 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21995815 _citation.pdbx_database_id_DOI 10.1186/1472-6807-11-39 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Edwards, T.E.' 1 primary 'Abramov, A.B.' 2 primary 'Smith, E.R.' 3 primary 'Baydo, R.O.' 4 primary 'Leonard, J.T.' 5 primary 'Leibly, D.J.' 6 primary 'Thompkins, K.B.' 7 primary 'Clifton, M.C.' 8 primary 'Gardberg, A.S.' 9 primary 'Staker, B.L.' 10 primary 'Van Voorhis, W.C.' 11 primary 'Myler, P.J.' 12 primary 'Stewart, L.J.' 13 # _cell.entry_id 3QD5 _cell.length_a 103.150 _cell.length_b 49.890 _cell.length_c 61.970 _cell.angle_alpha 90.00 _cell.angle_beta 108.62 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3QD5 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'putative ribose-5-phosphate isomerase' 17734.277 2 5.3.1.6 ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 3 non-polymer syn 'IODIDE ION' 126.904 29 ? ? ? ? 4 water nat water 18.015 213 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GPGSMAATPLPPLRLAIACDDAGVSYKEALKAHLSDNPLVSSITDVGVTSTTDKTAYPHVAIQAAQLIKDGKVDRALMI (CSO)GTGLGVAISANKVPGIRAVTAHDTFSVERAILSNDAQVLCFGQRVIGIELAKRLAGEWLTYRFDQKSASAQKVQA ISDYEKKFVEVN ; _entity_poly.pdbx_seq_one_letter_code_can ;GPGSMAATPLPPLRLAIACDDAGVSYKEALKAHLSDNPLVSSITDVGVTSTTDKTAYPHVAIQAAQLIKDGKVDRALMIC GTGLGVAISANKVPGIRAVTAHDTFSVERAILSNDAQVLCFGQRVIGIELAKRLAGEWLTYRFDQKSASAQKVQAISDYE KKFVEVN ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier CoimA.00584.a # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 GLY n 1 4 SER n 1 5 MET n 1 6 ALA n 1 7 ALA n 1 8 THR n 1 9 PRO n 1 10 LEU n 1 11 PRO n 1 12 PRO n 1 13 LEU n 1 14 ARG n 1 15 LEU n 1 16 ALA n 1 17 ILE n 1 18 ALA n 1 19 CYS n 1 20 ASP n 1 21 ASP n 1 22 ALA n 1 23 GLY n 1 24 VAL n 1 25 SER n 1 26 TYR n 1 27 LYS n 1 28 GLU n 1 29 ALA n 1 30 LEU n 1 31 LYS n 1 32 ALA n 1 33 HIS n 1 34 LEU n 1 35 SER n 1 36 ASP n 1 37 ASN n 1 38 PRO n 1 39 LEU n 1 40 VAL n 1 41 SER n 1 42 SER n 1 43 ILE n 1 44 THR n 1 45 ASP n 1 46 VAL n 1 47 GLY n 1 48 VAL n 1 49 THR n 1 50 SER n 1 51 THR n 1 52 THR n 1 53 ASP n 1 54 LYS n 1 55 THR n 1 56 ALA n 1 57 TYR n 1 58 PRO n 1 59 HIS n 1 60 VAL n 1 61 ALA n 1 62 ILE n 1 63 GLN n 1 64 ALA n 1 65 ALA n 1 66 GLN n 1 67 LEU n 1 68 ILE n 1 69 LYS n 1 70 ASP n 1 71 GLY n 1 72 LYS n 1 73 VAL n 1 74 ASP n 1 75 ARG n 1 76 ALA n 1 77 LEU n 1 78 MET n 1 79 ILE n 1 80 CSO n 1 81 GLY n 1 82 THR n 1 83 GLY n 1 84 LEU n 1 85 GLY n 1 86 VAL n 1 87 ALA n 1 88 ILE n 1 89 SER n 1 90 ALA n 1 91 ASN n 1 92 LYS n 1 93 VAL n 1 94 PRO n 1 95 GLY n 1 96 ILE n 1 97 ARG n 1 98 ALA n 1 99 VAL n 1 100 THR n 1 101 ALA n 1 102 HIS n 1 103 ASP n 1 104 THR n 1 105 PHE n 1 106 SER n 1 107 VAL n 1 108 GLU n 1 109 ARG n 1 110 ALA n 1 111 ILE n 1 112 LEU n 1 113 SER n 1 114 ASN n 1 115 ASP n 1 116 ALA n 1 117 GLN n 1 118 VAL n 1 119 LEU n 1 120 CYS n 1 121 PHE n 1 122 GLY n 1 123 GLN n 1 124 ARG n 1 125 VAL n 1 126 ILE n 1 127 GLY n 1 128 ILE n 1 129 GLU n 1 130 LEU n 1 131 ALA n 1 132 LYS n 1 133 ARG n 1 134 LEU n 1 135 ALA n 1 136 GLY n 1 137 GLU n 1 138 TRP n 1 139 LEU n 1 140 THR n 1 141 TYR n 1 142 ARG n 1 143 PHE n 1 144 ASP n 1 145 GLN n 1 146 LYS n 1 147 SER n 1 148 ALA n 1 149 SER n 1 150 ALA n 1 151 GLN n 1 152 LYS n 1 153 VAL n 1 154 GLN n 1 155 ALA n 1 156 ILE n 1 157 SER n 1 158 ASP n 1 159 TYR n 1 160 GLU n 1 161 LYS n 1 162 LYS n 1 163 PHE n 1 164 VAL n 1 165 GLU n 1 166 VAL n 1 167 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CIMG_07932, 4559626' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain RS _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Coccidioides immitis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 246410 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type AVA0421 _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3QD5 _struct_ref.pdbx_db_accession 3QD5 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ;GPGSMAATPLPPLRLAIACDDAGVSYKEALKAHLSDNPLVSSITDVGVTSTTDKTAYPHVAIQAAQLIKDGKVDRALMIC GTGLGVAISANKVPGIRAVTAHDTFSVERAILSNDAQVLCFGQRVIGIELAKRLAGEWLTYRFDQKSASAQKVQAISDYE KKFVEVN ; _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3QD5 A 1 ? 167 ? 3QD5 -3 ? 163 ? -3 163 2 1 3QD5 B 1 ? 167 ? 3QD5 -3 ? 163 ? -3 163 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CSO 'L-peptide linking' n S-HYDROXYCYSTEINE ? 'C3 H7 N O3 S' 137.158 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IOD non-polymer . 'IODIDE ION' ? 'I -1' 126.904 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3QD5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.13 _exptl_crystal.density_percent_sol 42.26 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;CoimA.00584.a.A1 PS00647 82 mg/mL against JCSG+ screen condition B9, 20% PEG 6000, 0.1 M Na Citrate pH 5.0, and soaked into 20% PEG 6000, 0.1 M Na Citrate pH 5.0, 0.7 M NaI, 22% ethylene glycol for one minute, crystal tracking ID 216516b9, VAPOR DIFFUSION, SITTING DROP, temperature 289K ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU SATURN 944+' _diffrn_detector.pdbx_collection_date 2011-01-11 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E+ SUPERBRIGHT' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 3QD5 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.900 _reflns.number_obs 23513 _reflns.number_all 23781 _reflns.percent_possible_obs 98.900 _reflns.pdbx_Rmerge_I_obs 0.055 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 20.490 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.900 1.950 87.500 0.152 ? 6.0 2.9 ? ? ? ? ? ? 1 1 1.950 2.000 99.700 0.137 ? 7.4 ? ? ? ? ? ? ? 2 1 2.000 2.060 99.700 0.114 ? 9.7 ? ? ? ? ? ? ? 3 1 2.060 2.120 99.700 0.106 ? 11.5 ? ? ? ? ? ? ? 4 1 2.120 2.190 100.000 0.096 ? 13.9 ? ? ? ? ? ? ? 5 1 2.190 2.270 99.700 0.086 ? 15.8 ? ? ? ? ? ? ? 6 1 2.270 2.360 99.900 0.084 ? 17.5 ? ? ? ? ? ? ? 7 1 2.360 2.450 99.800 0.082 ? 18.5 ? ? ? ? ? ? ? 8 1 2.450 2.560 99.900 0.077 ? 21.4 ? ? ? ? ? ? ? 9 1 2.560 2.690 99.600 0.073 ? 22.5 ? ? ? ? ? ? ? 10 1 2.690 2.830 99.800 0.064 ? 23.7 ? ? ? ? ? ? ? 11 1 2.830 3.000 99.700 0.060 ? 25.9 ? ? ? ? ? ? ? 12 1 3.000 3.210 99.700 0.056 ? 28.0 ? ? ? ? ? ? ? 13 1 3.210 3.470 100.000 0.049 ? 31.7 ? ? ? ? ? ? ? 14 1 3.470 3.800 99.500 0.044 ? 36.5 ? ? ? ? ? ? ? 15 1 3.800 4.250 100.000 0.041 ? 38.6 ? ? ? ? ? ? ? 16 1 4.250 4.910 99.300 0.042 ? 39.2 ? ? ? ? ? ? ? 17 1 4.910 6.010 100.000 0.046 ? 35.6 ? ? ? ? ? ? ? 18 1 6.010 8.500 99.400 0.044 ? 36.2 ? ? ? ? ? ? ? 19 1 8.500 50.00 98.000 0.044 ? 38.3 ? ? ? ? ? ? ? 20 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3QD5 _refine.ls_number_reflns_obs 22275 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.00 _refine.ls_d_res_high 1.90 _refine.ls_percent_reflns_obs 98.87 _refine.ls_R_factor_obs 0.16637 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.16423 _refine.ls_R_factor_R_free 0.20508 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1205 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 0.200 _refine.occupancy_max 1.000 _refine.correlation_coeff_Fo_to_Fc 0.957 _refine.correlation_coeff_Fo_to_Fc_free 0.933 _refine.B_iso_mean 18.317 _refine.aniso_B[1][1] 1.11 _refine.aniso_B[2][2] -0.39 _refine.aniso_B[3][3] -0.77 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.08 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'SAD, MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.152 _refine.pdbx_overall_ESU_R_Free 0.137 _refine.overall_SU_ML 0.085 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 5.813 _refine.overall_SU_R_Cruickshank_DPI 0.1527 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2369 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 37 _refine_hist.number_atoms_solvent 213 _refine_hist.number_atoms_total 2619 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 50.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.022 ? 2456 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.364 1.969 ? 3345 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.517 5.235 ? 340 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 38.448 24.286 ? 91 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.031 15.000 ? 404 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 13.156 15.000 ? 14 'X-RAY DIFFRACTION' ? r_chiral_restr 0.090 0.200 ? 407 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.021 ? 1810 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.729 1.500 ? 1612 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.313 2.000 ? 2594 'X-RAY DIFFRACTION' ? r_scbond_it 2.329 3.000 ? 844 'X-RAY DIFFRACTION' ? r_scangle_it 3.778 4.500 ? 744 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.900 _refine_ls_shell.d_res_low 1.949 _refine_ls_shell.number_reflns_R_work 1434 _refine_ls_shell.R_factor_R_work 0.185 _refine_ls_shell.percent_reflns_obs 87.42 _refine_ls_shell.R_factor_R_free 0.242 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 81 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3QD5 _struct.title 'Crystal structure of a putative ribose-5-phosphate isomerase from Coccidioides immitis solved by combined iodide ion SAD and MR' _struct.pdbx_descriptor 'putative ribose-5-phosphate isomerase (E.C.5.3.1.6)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3QD5 _struct_keywords.pdbx_keywords ISOMERASE _struct_keywords.text ;Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, SSGCID, Coccidioidomycosis, putative uncharacterized protein, hypothetical protein, ribose-5-phosphate isomerase, iodide ion, ISOMERASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? O N N 3 ? P N N 3 ? Q N N 2 ? R N N 3 ? S N N 3 ? T N N 3 ? U N N 3 ? V N N 3 ? W N N 3 ? X N N 3 ? Y N N 3 ? Z N N 3 ? AA N N 3 ? BA N N 3 ? CA N N 3 ? DA N N 3 ? EA N N 3 ? FA N N 3 ? GA N N 3 ? HA N N 4 ? IA N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 23 ? ASP A 36 ? GLY A 19 ASP A 32 1 ? 14 HELX_P HELX_P2 2 ALA A 56 ? ASP A 70 ? ALA A 52 ASP A 66 1 ? 15 HELX_P HELX_P3 3 GLY A 83 ? LYS A 92 ? GLY A 79 LYS A 88 1 ? 10 HELX_P HELX_P4 4 ASP A 103 ? SER A 113 ? ASP A 99 SER A 109 1 ? 11 HELX_P HELX_P5 5 GLY A 127 ? LEU A 139 ? GLY A 123 LEU A 135 1 ? 13 HELX_P HELX_P6 6 SER A 147 ? LYS A 161 ? SER A 143 LYS A 157 1 ? 15 HELX_P HELX_P7 7 GLY B 23 ? ASP B 36 ? GLY B 19 ASP B 32 1 ? 14 HELX_P HELX_P8 8 ALA B 56 ? ASP B 70 ? ALA B 52 ASP B 66 1 ? 15 HELX_P HELX_P9 9 GLY B 83 ? LYS B 92 ? GLY B 79 LYS B 88 1 ? 10 HELX_P HELX_P10 10 ASP B 103 ? SER B 113 ? ASP B 99 SER B 109 1 ? 11 HELX_P HELX_P11 11 GLY B 127 ? LEU B 139 ? GLY B 123 LEU B 135 1 ? 13 HELX_P HELX_P12 12 ALA B 148 ? LYS B 161 ? ALA B 144 LYS B 157 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ILE 79 C ? ? ? 1_555 A CSO 80 N ? ? A ILE 75 A CSO 76 1_555 ? ? ? ? ? ? ? 1.328 ? covale2 covale ? ? A CSO 80 C ? ? ? 1_555 A GLY 81 N ? ? A CSO 76 A GLY 77 1_555 ? ? ? ? ? ? ? 1.321 ? covale3 covale ? ? B ILE 79 C ? ? ? 1_555 B CSO 80 N ? ? B ILE 75 B CSO 76 1_555 ? ? ? ? ? ? ? 1.324 ? covale4 covale ? ? B CSO 80 C ? ? ? 1_555 B GLY 81 N ? ? B CSO 76 B GLY 77 1_555 ? ? ? ? ? ? ? 1.333 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 47 A . ? GLY 43 A VAL 48 A ? VAL 44 A 1 -3.19 2 GLY 47 B . ? GLY 43 B VAL 48 B ? VAL 44 B 1 -3.52 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? C ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel B 1 2 ? anti-parallel C 1 2 ? parallel C 2 3 ? parallel C 3 4 ? parallel C 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 40 ? GLY A 47 ? VAL A 36 GLY A 43 A 2 LEU A 13 ? CYS A 19 ? LEU A 9 CYS A 15 A 3 ARG A 75 ? CSO A 80 ? ARG A 71 CSO A 76 A 4 VAL A 118 ? GLY A 122 ? VAL A 114 GLY A 118 A 5 ALA A 98 ? THR A 100 ? ALA A 94 THR A 96 B 1 PHE A 163 ? GLU A 165 ? PHE A 159 GLU A 161 B 2 PHE B 163 ? GLU B 165 ? PHE B 159 GLU B 161 C 1 VAL B 40 ? ASP B 45 ? VAL B 36 ASP B 41 C 2 LEU B 13 ? CYS B 19 ? LEU B 9 CYS B 15 C 3 ARG B 75 ? CSO B 80 ? ARG B 71 CSO B 76 C 4 VAL B 118 ? GLY B 122 ? VAL B 114 GLY B 118 C 5 ALA B 98 ? THR B 100 ? ALA B 94 THR B 96 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 46 ? O VAL A 42 N ILE A 17 ? N ILE A 13 A 2 3 N ALA A 18 ? N ALA A 14 O ILE A 79 ? O ILE A 75 A 3 4 N MET A 78 ? N MET A 74 O LEU A 119 ? O LEU A 115 A 4 5 O CYS A 120 ? O CYS A 116 N VAL A 99 ? N VAL A 95 B 1 2 N VAL A 164 ? N VAL A 160 O VAL B 164 ? O VAL B 160 C 1 2 O SER B 42 ? O SER B 38 N LEU B 15 ? N LEU B 11 C 2 3 N ALA B 16 ? N ALA B 12 O LEU B 77 ? O LEU B 73 C 3 4 N MET B 78 ? N MET B 74 O LEU B 119 ? O LEU B 115 C 4 5 O CYS B 120 ? O CYS B 116 N VAL B 99 ? N VAL B 95 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE EDO A 164' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE EDO B 164' AC3 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE IOD A 165' AC4 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD A 166' AC5 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE IOD A 167' AC6 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE IOD A 168' AC7 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE IOD A 169' AC8 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD A 170' AC9 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE IOD A 171' BC1 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE IOD A 174' BC2 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE IOD A 175' BC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE IOD A 176' BC4 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE IOD B 165' BC5 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD B 166' BC6 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE IOD B 172' BC7 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE IOD B 174' BC8 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE IOD B 175' BC9 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE IOD B 176' CC1 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE IOD B 177' CC2 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD B 179' CC3 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE IOD B 180' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ARG A 75 ? ARG A 71 . ? 1_555 ? 2 AC1 5 ASP A 115 ? ASP A 111 . ? 1_555 ? 3 AC1 5 ALA A 116 ? ALA A 112 . ? 1_555 ? 4 AC1 5 HOH HA . ? HOH A 205 . ? 1_555 ? 5 AC1 5 HOH HA . ? HOH A 256 . ? 1_555 ? 6 AC2 5 ARG B 75 ? ARG B 71 . ? 1_555 ? 7 AC2 5 ASP B 115 ? ASP B 111 . ? 1_555 ? 8 AC2 5 ALA B 116 ? ALA B 112 . ? 1_555 ? 9 AC2 5 HOH IA . ? HOH B 212 . ? 1_555 ? 10 AC2 5 HOH IA . ? HOH B 264 . ? 1_555 ? 11 AC3 2 IOD E . ? IOD A 166 . ? 1_555 ? 12 AC3 2 HOH HA . ? HOH A 241 . ? 1_555 ? 13 AC4 1 IOD D . ? IOD A 165 . ? 1_555 ? 14 AC5 2 IOD G . ? IOD A 168 . ? 1_555 ? 15 AC5 2 HOH IA . ? HOH B 182 . ? 1_565 ? 16 AC6 2 ARG A 142 ? ARG A 138 . ? 1_555 ? 17 AC6 2 IOD F . ? IOD A 167 . ? 1_555 ? 18 AC7 4 CSO A 80 ? CSO A 76 . ? 1_555 ? 19 AC7 4 THR A 82 ? THR A 78 . ? 1_555 ? 20 AC7 4 GLY A 85 ? GLY A 81 . ? 1_555 ? 21 AC7 4 HOH HA . ? HOH A 195 . ? 1_555 ? 22 AC8 1 IOD J . ? IOD A 171 . ? 1_555 ? 23 AC9 4 GLY A 81 ? GLY A 77 . ? 1_555 ? 24 AC9 4 ARG A 124 ? ARG A 120 . ? 1_555 ? 25 AC9 4 IOD I . ? IOD A 170 . ? 1_555 ? 26 AC9 4 HOH HA . ? HOH A 278 . ? 1_555 ? 27 BC1 2 ALA A 56 ? ALA A 52 . ? 1_555 ? 28 BC1 2 ALA B 155 ? ALA B 151 . ? 1_555 ? 29 BC2 2 GLN A 66 ? GLN A 62 . ? 1_555 ? 30 BC2 2 TYR B 159 ? TYR B 155 . ? 1_555 ? 31 BC3 4 ASP A 103 ? ASP A 99 . ? 1_555 ? 32 BC3 4 ASP A 103 ? ASP A 99 . ? 2_656 ? 33 BC3 4 THR A 104 ? THR A 100 . ? 2_656 ? 34 BC3 4 THR A 104 ? THR A 100 . ? 1_555 ? 35 BC4 2 HOH HA . ? HOH A 243 . ? 1_555 ? 36 BC4 2 ARG B 124 ? ARG B 120 . ? 1_555 ? 37 BC5 1 IOD GA . ? IOD B 180 . ? 1_555 ? 38 BC6 4 TYR A 159 ? TYR A 155 . ? 2_655 ? 39 BC6 4 SER B 50 ? SER B 46 . ? 1_555 ? 40 BC6 4 HOH IA . ? HOH B 202 . ? 1_555 ? 41 BC6 4 HOH IA . ? HOH B 214 . ? 1_555 ? 42 BC7 2 ALA B 56 ? ALA B 52 . ? 1_555 ? 43 BC7 2 HIS B 59 ? HIS B 55 . ? 1_555 ? 44 BC8 4 ASP B 103 ? ASP B 99 . ? 1_555 ? 45 BC8 4 ASP B 103 ? ASP B 99 . ? 2_656 ? 46 BC8 4 THR B 104 ? THR B 100 . ? 2_656 ? 47 BC8 4 THR B 104 ? THR B 100 . ? 1_555 ? 48 BC9 3 HIS B 33 ? HIS B 29 . ? 1_555 ? 49 BC9 3 HOH IA . ? HOH B 253 . ? 1_555 ? 50 BC9 3 HOH IA . ? HOH B 255 . ? 1_555 ? 51 CC1 2 GLN B 145 ? GLN B 141 . ? 1_555 ? 52 CC1 2 LYS B 146 ? LYS B 142 . ? 1_555 ? 53 CC2 1 HOH IA . ? HOH B 191 . ? 1_555 ? 54 CC3 2 IOD S . ? IOD B 166 . ? 1_555 ? 55 CC3 2 HOH IA . ? HOH B 197 . ? 1_555 ? # _atom_sites.entry_id 3QD5 _atom_sites.fract_transf_matrix[1][1] 0.009695 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003266 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020044 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017028 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C I N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -3 ? ? ? A . n A 1 2 PRO 2 -2 ? ? ? A . n A 1 3 GLY 3 -1 ? ? ? A . n A 1 4 SER 4 0 ? ? ? A . n A 1 5 MET 5 1 ? ? ? A . n A 1 6 ALA 6 2 ? ? ? A . n A 1 7 ALA 7 3 3 ALA ALA A . n A 1 8 THR 8 4 4 THR THR A . n A 1 9 PRO 9 5 5 PRO PRO A . n A 1 10 LEU 10 6 6 LEU LEU A . n A 1 11 PRO 11 7 7 PRO PRO A . n A 1 12 PRO 12 8 8 PRO PRO A . n A 1 13 LEU 13 9 9 LEU LEU A . n A 1 14 ARG 14 10 10 ARG ARG A . n A 1 15 LEU 15 11 11 LEU LEU A . n A 1 16 ALA 16 12 12 ALA ALA A . n A 1 17 ILE 17 13 13 ILE ILE A . n A 1 18 ALA 18 14 14 ALA ALA A . n A 1 19 CYS 19 15 15 CYS CYS A . n A 1 20 ASP 20 16 16 ASP ASP A . n A 1 21 ASP 21 17 17 ASP ASP A . n A 1 22 ALA 22 18 18 ALA ALA A . n A 1 23 GLY 23 19 19 GLY GLY A . n A 1 24 VAL 24 20 20 VAL VAL A . n A 1 25 SER 25 21 21 SER SER A . n A 1 26 TYR 26 22 22 TYR TYR A . n A 1 27 LYS 27 23 23 LYS LYS A . n A 1 28 GLU 28 24 24 GLU GLU A . n A 1 29 ALA 29 25 25 ALA ALA A . n A 1 30 LEU 30 26 26 LEU LEU A . n A 1 31 LYS 31 27 27 LYS LYS A . n A 1 32 ALA 32 28 28 ALA ALA A . n A 1 33 HIS 33 29 29 HIS HIS A . n A 1 34 LEU 34 30 30 LEU LEU A . n A 1 35 SER 35 31 31 SER SER A . n A 1 36 ASP 36 32 32 ASP ASP A . n A 1 37 ASN 37 33 33 ASN ASN A . n A 1 38 PRO 38 34 34 PRO PRO A . n A 1 39 LEU 39 35 35 LEU LEU A . n A 1 40 VAL 40 36 36 VAL VAL A . n A 1 41 SER 41 37 37 SER SER A . n A 1 42 SER 42 38 38 SER SER A . n A 1 43 ILE 43 39 39 ILE ILE A . n A 1 44 THR 44 40 40 THR THR A . n A 1 45 ASP 45 41 41 ASP ASP A . n A 1 46 VAL 46 42 42 VAL VAL A . n A 1 47 GLY 47 43 43 GLY GLY A . n A 1 48 VAL 48 44 44 VAL VAL A . n A 1 49 THR 49 45 45 THR THR A . n A 1 50 SER 50 46 46 SER SER A . n A 1 51 THR 51 47 47 THR THR A . n A 1 52 THR 52 48 48 THR THR A . n A 1 53 ASP 53 49 49 ASP ASP A . n A 1 54 LYS 54 50 50 LYS LYS A . n A 1 55 THR 55 51 51 THR THR A . n A 1 56 ALA 56 52 52 ALA ALA A . n A 1 57 TYR 57 53 53 TYR TYR A . n A 1 58 PRO 58 54 54 PRO PRO A . n A 1 59 HIS 59 55 55 HIS HIS A . n A 1 60 VAL 60 56 56 VAL VAL A . n A 1 61 ALA 61 57 57 ALA ALA A . n A 1 62 ILE 62 58 58 ILE ILE A . n A 1 63 GLN 63 59 59 GLN GLN A . n A 1 64 ALA 64 60 60 ALA ALA A . n A 1 65 ALA 65 61 61 ALA ALA A . n A 1 66 GLN 66 62 62 GLN GLN A . n A 1 67 LEU 67 63 63 LEU LEU A . n A 1 68 ILE 68 64 64 ILE ILE A . n A 1 69 LYS 69 65 65 LYS LYS A . n A 1 70 ASP 70 66 66 ASP ASP A . n A 1 71 GLY 71 67 67 GLY GLY A . n A 1 72 LYS 72 68 68 LYS LYS A . n A 1 73 VAL 73 69 69 VAL VAL A . n A 1 74 ASP 74 70 70 ASP ASP A . n A 1 75 ARG 75 71 71 ARG ARG A . n A 1 76 ALA 76 72 72 ALA ALA A . n A 1 77 LEU 77 73 73 LEU LEU A . n A 1 78 MET 78 74 74 MET MET A . n A 1 79 ILE 79 75 75 ILE ILE A . n A 1 80 CSO 80 76 76 CSO CSO A . n A 1 81 GLY 81 77 77 GLY GLY A . n A 1 82 THR 82 78 78 THR THR A . n A 1 83 GLY 83 79 79 GLY GLY A . n A 1 84 LEU 84 80 80 LEU LEU A . n A 1 85 GLY 85 81 81 GLY GLY A . n A 1 86 VAL 86 82 82 VAL VAL A . n A 1 87 ALA 87 83 83 ALA ALA A . n A 1 88 ILE 88 84 84 ILE ILE A . n A 1 89 SER 89 85 85 SER SER A . n A 1 90 ALA 90 86 86 ALA ALA A . n A 1 91 ASN 91 87 87 ASN ASN A . n A 1 92 LYS 92 88 88 LYS LYS A . n A 1 93 VAL 93 89 89 VAL VAL A . n A 1 94 PRO 94 90 90 PRO PRO A . n A 1 95 GLY 95 91 91 GLY GLY A . n A 1 96 ILE 96 92 92 ILE ILE A . n A 1 97 ARG 97 93 93 ARG ARG A . n A 1 98 ALA 98 94 94 ALA ALA A . n A 1 99 VAL 99 95 95 VAL VAL A . n A 1 100 THR 100 96 96 THR THR A . n A 1 101 ALA 101 97 97 ALA ALA A . n A 1 102 HIS 102 98 98 HIS HIS A . n A 1 103 ASP 103 99 99 ASP ASP A . n A 1 104 THR 104 100 100 THR THR A . n A 1 105 PHE 105 101 101 PHE PHE A . n A 1 106 SER 106 102 102 SER SER A . n A 1 107 VAL 107 103 103 VAL VAL A . n A 1 108 GLU 108 104 104 GLU GLU A . n A 1 109 ARG 109 105 105 ARG ARG A . n A 1 110 ALA 110 106 106 ALA ALA A . n A 1 111 ILE 111 107 107 ILE ILE A . n A 1 112 LEU 112 108 108 LEU LEU A . n A 1 113 SER 113 109 109 SER SER A . n A 1 114 ASN 114 110 110 ASN ASN A . n A 1 115 ASP 115 111 111 ASP ASP A . n A 1 116 ALA 116 112 112 ALA ALA A . n A 1 117 GLN 117 113 113 GLN GLN A . n A 1 118 VAL 118 114 114 VAL VAL A . n A 1 119 LEU 119 115 115 LEU LEU A . n A 1 120 CYS 120 116 116 CYS CYS A . n A 1 121 PHE 121 117 117 PHE PHE A . n A 1 122 GLY 122 118 118 GLY GLY A . n A 1 123 GLN 123 119 119 GLN GLN A . n A 1 124 ARG 124 120 120 ARG ARG A . n A 1 125 VAL 125 121 121 VAL VAL A . n A 1 126 ILE 126 122 122 ILE ILE A . n A 1 127 GLY 127 123 123 GLY GLY A . n A 1 128 ILE 128 124 124 ILE ILE A . n A 1 129 GLU 129 125 125 GLU GLU A . n A 1 130 LEU 130 126 126 LEU LEU A . n A 1 131 ALA 131 127 127 ALA ALA A . n A 1 132 LYS 132 128 128 LYS LYS A . n A 1 133 ARG 133 129 129 ARG ARG A . n A 1 134 LEU 134 130 130 LEU LEU A . n A 1 135 ALA 135 131 131 ALA ALA A . n A 1 136 GLY 136 132 132 GLY GLY A . n A 1 137 GLU 137 133 133 GLU GLU A . n A 1 138 TRP 138 134 134 TRP TRP A . n A 1 139 LEU 139 135 135 LEU LEU A . n A 1 140 THR 140 136 136 THR THR A . n A 1 141 TYR 141 137 137 TYR TYR A . n A 1 142 ARG 142 138 138 ARG ARG A . n A 1 143 PHE 143 139 139 PHE PHE A . n A 1 144 ASP 144 140 140 ASP ASP A . n A 1 145 GLN 145 141 141 GLN GLN A . n A 1 146 LYS 146 142 142 LYS LYS A . n A 1 147 SER 147 143 143 SER SER A . n A 1 148 ALA 148 144 144 ALA ALA A . n A 1 149 SER 149 145 145 SER SER A . n A 1 150 ALA 150 146 146 ALA ALA A . n A 1 151 GLN 151 147 147 GLN GLN A . n A 1 152 LYS 152 148 148 LYS LYS A . n A 1 153 VAL 153 149 149 VAL VAL A . n A 1 154 GLN 154 150 150 GLN GLN A . n A 1 155 ALA 155 151 151 ALA ALA A . n A 1 156 ILE 156 152 152 ILE ILE A . n A 1 157 SER 157 153 153 SER SER A . n A 1 158 ASP 158 154 154 ASP ASP A . n A 1 159 TYR 159 155 155 TYR TYR A . n A 1 160 GLU 160 156 156 GLU GLU A . n A 1 161 LYS 161 157 157 LYS LYS A . n A 1 162 LYS 162 158 158 LYS LYS A . n A 1 163 PHE 163 159 159 PHE PHE A . n A 1 164 VAL 164 160 160 VAL VAL A . n A 1 165 GLU 165 161 161 GLU GLU A . n A 1 166 VAL 166 162 162 VAL VAL A . n A 1 167 ASN 167 163 ? ? ? A . n B 1 1 GLY 1 -3 ? ? ? B . n B 1 2 PRO 2 -2 ? ? ? B . n B 1 3 GLY 3 -1 ? ? ? B . n B 1 4 SER 4 0 ? ? ? B . n B 1 5 MET 5 1 ? ? ? B . n B 1 6 ALA 6 2 ? ? ? B . n B 1 7 ALA 7 3 ? ? ? B . n B 1 8 THR 8 4 4 THR THR B . n B 1 9 PRO 9 5 5 PRO PRO B . n B 1 10 LEU 10 6 6 LEU LEU B . n B 1 11 PRO 11 7 7 PRO PRO B . n B 1 12 PRO 12 8 8 PRO PRO B . n B 1 13 LEU 13 9 9 LEU LEU B . n B 1 14 ARG 14 10 10 ARG ARG B . n B 1 15 LEU 15 11 11 LEU LEU B . n B 1 16 ALA 16 12 12 ALA ALA B . n B 1 17 ILE 17 13 13 ILE ILE B . n B 1 18 ALA 18 14 14 ALA ALA B . n B 1 19 CYS 19 15 15 CYS CYS B . n B 1 20 ASP 20 16 16 ASP ASP B . n B 1 21 ASP 21 17 17 ASP ASP B . n B 1 22 ALA 22 18 18 ALA ALA B . n B 1 23 GLY 23 19 19 GLY GLY B . n B 1 24 VAL 24 20 20 VAL VAL B . n B 1 25 SER 25 21 21 SER SER B . n B 1 26 TYR 26 22 22 TYR TYR B . n B 1 27 LYS 27 23 23 LYS LYS B . n B 1 28 GLU 28 24 24 GLU GLU B . n B 1 29 ALA 29 25 25 ALA ALA B . n B 1 30 LEU 30 26 26 LEU LEU B . n B 1 31 LYS 31 27 27 LYS LYS B . n B 1 32 ALA 32 28 28 ALA ALA B . n B 1 33 HIS 33 29 29 HIS HIS B . n B 1 34 LEU 34 30 30 LEU LEU B . n B 1 35 SER 35 31 31 SER SER B . n B 1 36 ASP 36 32 32 ASP ASP B . n B 1 37 ASN 37 33 33 ASN ASN B . n B 1 38 PRO 38 34 34 PRO PRO B . n B 1 39 LEU 39 35 35 LEU LEU B . n B 1 40 VAL 40 36 36 VAL VAL B . n B 1 41 SER 41 37 37 SER SER B . n B 1 42 SER 42 38 38 SER SER B . n B 1 43 ILE 43 39 39 ILE ILE B . n B 1 44 THR 44 40 40 THR THR B . n B 1 45 ASP 45 41 41 ASP ASP B . n B 1 46 VAL 46 42 42 VAL VAL B . n B 1 47 GLY 47 43 43 GLY GLY B . n B 1 48 VAL 48 44 44 VAL VAL B . n B 1 49 THR 49 45 45 THR THR B . n B 1 50 SER 50 46 46 SER SER B . n B 1 51 THR 51 47 47 THR THR B . n B 1 52 THR 52 48 48 THR THR B . n B 1 53 ASP 53 49 49 ASP ASP B . n B 1 54 LYS 54 50 50 LYS LYS B . n B 1 55 THR 55 51 51 THR THR B . n B 1 56 ALA 56 52 52 ALA ALA B . n B 1 57 TYR 57 53 53 TYR TYR B . n B 1 58 PRO 58 54 54 PRO PRO B . n B 1 59 HIS 59 55 55 HIS HIS B . n B 1 60 VAL 60 56 56 VAL VAL B . n B 1 61 ALA 61 57 57 ALA ALA B . n B 1 62 ILE 62 58 58 ILE ILE B . n B 1 63 GLN 63 59 59 GLN GLN B . n B 1 64 ALA 64 60 60 ALA ALA B . n B 1 65 ALA 65 61 61 ALA ALA B . n B 1 66 GLN 66 62 62 GLN GLN B . n B 1 67 LEU 67 63 63 LEU LEU B . n B 1 68 ILE 68 64 64 ILE ILE B . n B 1 69 LYS 69 65 65 LYS LYS B . n B 1 70 ASP 70 66 66 ASP ASP B . n B 1 71 GLY 71 67 67 GLY GLY B . n B 1 72 LYS 72 68 68 LYS LYS B . n B 1 73 VAL 73 69 69 VAL VAL B . n B 1 74 ASP 74 70 70 ASP ASP B . n B 1 75 ARG 75 71 71 ARG ARG B . n B 1 76 ALA 76 72 72 ALA ALA B . n B 1 77 LEU 77 73 73 LEU LEU B . n B 1 78 MET 78 74 74 MET MET B . n B 1 79 ILE 79 75 75 ILE ILE B . n B 1 80 CSO 80 76 76 CSO CSO B . n B 1 81 GLY 81 77 77 GLY GLY B . n B 1 82 THR 82 78 78 THR THR B . n B 1 83 GLY 83 79 79 GLY GLY B . n B 1 84 LEU 84 80 80 LEU LEU B . n B 1 85 GLY 85 81 81 GLY GLY B . n B 1 86 VAL 86 82 82 VAL VAL B . n B 1 87 ALA 87 83 83 ALA ALA B . n B 1 88 ILE 88 84 84 ILE ILE B . n B 1 89 SER 89 85 85 SER SER B . n B 1 90 ALA 90 86 86 ALA ALA B . n B 1 91 ASN 91 87 87 ASN ASN B . n B 1 92 LYS 92 88 88 LYS LYS B . n B 1 93 VAL 93 89 89 VAL VAL B . n B 1 94 PRO 94 90 90 PRO PRO B . n B 1 95 GLY 95 91 91 GLY GLY B . n B 1 96 ILE 96 92 92 ILE ILE B . n B 1 97 ARG 97 93 93 ARG ARG B . n B 1 98 ALA 98 94 94 ALA ALA B . n B 1 99 VAL 99 95 95 VAL VAL B . n B 1 100 THR 100 96 96 THR THR B . n B 1 101 ALA 101 97 97 ALA ALA B . n B 1 102 HIS 102 98 98 HIS HIS B . n B 1 103 ASP 103 99 99 ASP ASP B . n B 1 104 THR 104 100 100 THR THR B . n B 1 105 PHE 105 101 101 PHE PHE B . n B 1 106 SER 106 102 102 SER SER B . n B 1 107 VAL 107 103 103 VAL VAL B . n B 1 108 GLU 108 104 104 GLU GLU B . n B 1 109 ARG 109 105 105 ARG ARG B . n B 1 110 ALA 110 106 106 ALA ALA B . n B 1 111 ILE 111 107 107 ILE ILE B . n B 1 112 LEU 112 108 108 LEU LEU B . n B 1 113 SER 113 109 109 SER SER B . n B 1 114 ASN 114 110 110 ASN ASN B . n B 1 115 ASP 115 111 111 ASP ASP B . n B 1 116 ALA 116 112 112 ALA ALA B . n B 1 117 GLN 117 113 113 GLN GLN B . n B 1 118 VAL 118 114 114 VAL VAL B . n B 1 119 LEU 119 115 115 LEU LEU B . n B 1 120 CYS 120 116 116 CYS CYS B . n B 1 121 PHE 121 117 117 PHE PHE B . n B 1 122 GLY 122 118 118 GLY GLY B . n B 1 123 GLN 123 119 119 GLN GLN B . n B 1 124 ARG 124 120 120 ARG ARG B . n B 1 125 VAL 125 121 121 VAL VAL B . n B 1 126 ILE 126 122 122 ILE ILE B . n B 1 127 GLY 127 123 123 GLY GLY B . n B 1 128 ILE 128 124 124 ILE ILE B . n B 1 129 GLU 129 125 125 GLU GLU B . n B 1 130 LEU 130 126 126 LEU LEU B . n B 1 131 ALA 131 127 127 ALA ALA B . n B 1 132 LYS 132 128 128 LYS LYS B . n B 1 133 ARG 133 129 129 ARG ARG B . n B 1 134 LEU 134 130 130 LEU LEU B . n B 1 135 ALA 135 131 131 ALA ALA B . n B 1 136 GLY 136 132 132 GLY GLY B . n B 1 137 GLU 137 133 133 GLU GLU B . n B 1 138 TRP 138 134 134 TRP TRP B . n B 1 139 LEU 139 135 135 LEU LEU B . n B 1 140 THR 140 136 136 THR THR B . n B 1 141 TYR 141 137 137 TYR TYR B . n B 1 142 ARG 142 138 138 ARG ARG B . n B 1 143 PHE 143 139 139 PHE PHE B . n B 1 144 ASP 144 140 140 ASP ASP B . n B 1 145 GLN 145 141 141 GLN GLN B . n B 1 146 LYS 146 142 142 LYS LYS B . n B 1 147 SER 147 143 143 SER SER B . n B 1 148 ALA 148 144 144 ALA ALA B . n B 1 149 SER 149 145 145 SER SER B . n B 1 150 ALA 150 146 146 ALA ALA B . n B 1 151 GLN 151 147 147 GLN GLN B . n B 1 152 LYS 152 148 148 LYS LYS B . n B 1 153 VAL 153 149 149 VAL VAL B . n B 1 154 GLN 154 150 150 GLN GLN B . n B 1 155 ALA 155 151 151 ALA ALA B . n B 1 156 ILE 156 152 152 ILE ILE B . n B 1 157 SER 157 153 153 SER SER B . n B 1 158 ASP 158 154 154 ASP ASP B . n B 1 159 TYR 159 155 155 TYR TYR B . n B 1 160 GLU 160 156 156 GLU GLU B . n B 1 161 LYS 161 157 157 LYS LYS B . n B 1 162 LYS 162 158 158 LYS LYS B . n B 1 163 PHE 163 159 159 PHE PHE B . n B 1 164 VAL 164 160 160 VAL VAL B . n B 1 165 GLU 165 161 161 GLU GLU B . n B 1 166 VAL 166 162 162 VAL VAL B . n B 1 167 ASN 167 163 163 ASN ASN B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Seattle Structural Genomics Center for Infectious Disease' _pdbx_SG_project.initial_of_center SSGCID # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO 1 164 164 EDO EDO A . D 3 IOD 1 165 1 IOD IOD A . E 3 IOD 1 166 2 IOD IOD A . F 3 IOD 1 167 3 IOD IOD A . G 3 IOD 1 168 4 IOD IOD A . H 3 IOD 1 169 5 IOD IOD A . I 3 IOD 1 170 6 IOD IOD A . J 3 IOD 1 171 7 IOD IOD A . K 3 IOD 1 172 8 IOD IOD A . L 3 IOD 1 173 9 IOD IOD A . M 3 IOD 1 174 10 IOD IOD A . N 3 IOD 1 175 11 IOD IOD A . O 3 IOD 1 176 12 IOD IOD A . P 3 IOD 1 177 27 IOD IOD A . Q 2 EDO 1 164 164 EDO EDO B . R 3 IOD 1 165 13 IOD IOD B . S 3 IOD 1 166 14 IOD IOD B . T 3 IOD 1 167 15 IOD IOD B . U 3 IOD 1 168 16 IOD IOD B . V 3 IOD 1 169 17 IOD IOD B . W 3 IOD 1 170 18 IOD IOD B . X 3 IOD 1 171 19 IOD IOD B . Y 3 IOD 1 172 20 IOD IOD B . Z 3 IOD 1 173 21 IOD IOD B . AA 3 IOD 1 174 22 IOD IOD B . BA 3 IOD 1 175 23 IOD IOD B . CA 3 IOD 1 176 24 IOD IOD B . DA 3 IOD 1 177 25 IOD IOD B . EA 3 IOD 1 178 26 IOD IOD B . FA 3 IOD 1 179 28 IOD IOD B . GA 3 IOD 1 180 29 IOD IOD B . HA 4 HOH 1 178 2 HOH HOH A . HA 4 HOH 2 179 5 HOH HOH A . HA 4 HOH 3 180 180 HOH HOH A . HA 4 HOH 4 181 181 HOH HOH A . HA 4 HOH 5 182 182 HOH HOH A . HA 4 HOH 6 183 183 HOH HOH A . HA 4 HOH 7 184 184 HOH HOH A . HA 4 HOH 8 185 185 HOH HOH A . HA 4 HOH 9 186 6 HOH HOH A . HA 4 HOH 10 187 187 HOH HOH A . HA 4 HOH 11 188 188 HOH HOH A . HA 4 HOH 12 189 189 HOH HOH A . HA 4 HOH 13 190 190 HOH HOH A . HA 4 HOH 14 191 191 HOH HOH A . HA 4 HOH 15 192 192 HOH HOH A . HA 4 HOH 16 193 193 HOH HOH A . HA 4 HOH 17 194 8 HOH HOH A . HA 4 HOH 18 195 195 HOH HOH A . HA 4 HOH 19 196 14 HOH HOH A . HA 4 HOH 20 197 15 HOH HOH A . HA 4 HOH 21 198 16 HOH HOH A . HA 4 HOH 22 199 17 HOH HOH A . HA 4 HOH 23 200 19 HOH HOH A . HA 4 HOH 24 201 20 HOH HOH A . HA 4 HOH 25 202 25 HOH HOH A . HA 4 HOH 26 203 28 HOH HOH A . HA 4 HOH 27 204 204 HOH HOH A . HA 4 HOH 28 205 32 HOH HOH A . HA 4 HOH 29 206 34 HOH HOH A . HA 4 HOH 30 207 35 HOH HOH A . HA 4 HOH 31 208 36 HOH HOH A . HA 4 HOH 32 209 39 HOH HOH A . HA 4 HOH 33 210 210 HOH HOH A . HA 4 HOH 34 211 211 HOH HOH A . HA 4 HOH 35 212 212 HOH HOH A . HA 4 HOH 36 213 40 HOH HOH A . HA 4 HOH 37 214 41 HOH HOH A . HA 4 HOH 38 215 43 HOH HOH A . HA 4 HOH 39 216 45 HOH HOH A . HA 4 HOH 40 217 47 HOH HOH A . HA 4 HOH 41 218 49 HOH HOH A . HA 4 HOH 42 219 51 HOH HOH A . HA 4 HOH 43 220 58 HOH HOH A . HA 4 HOH 44 221 59 HOH HOH A . HA 4 HOH 45 222 61 HOH HOH A . HA 4 HOH 46 223 63 HOH HOH A . HA 4 HOH 47 224 65 HOH HOH A . HA 4 HOH 48 225 66 HOH HOH A . HA 4 HOH 49 226 67 HOH HOH A . HA 4 HOH 50 227 70 HOH HOH A . HA 4 HOH 51 228 75 HOH HOH A . HA 4 HOH 52 229 78 HOH HOH A . HA 4 HOH 53 230 80 HOH HOH A . HA 4 HOH 54 231 83 HOH HOH A . HA 4 HOH 55 232 84 HOH HOH A . HA 4 HOH 56 233 85 HOH HOH A . HA 4 HOH 57 234 88 HOH HOH A . HA 4 HOH 58 235 90 HOH HOH A . HA 4 HOH 59 236 91 HOH HOH A . HA 4 HOH 60 237 92 HOH HOH A . HA 4 HOH 61 238 93 HOH HOH A . HA 4 HOH 62 239 95 HOH HOH A . HA 4 HOH 63 240 97 HOH HOH A . HA 4 HOH 64 241 98 HOH HOH A . HA 4 HOH 65 242 100 HOH HOH A . HA 4 HOH 66 243 101 HOH HOH A . HA 4 HOH 67 244 103 HOH HOH A . HA 4 HOH 68 245 106 HOH HOH A . HA 4 HOH 69 246 108 HOH HOH A . HA 4 HOH 70 247 111 HOH HOH A . HA 4 HOH 71 248 112 HOH HOH A . HA 4 HOH 72 249 114 HOH HOH A . HA 4 HOH 73 250 115 HOH HOH A . HA 4 HOH 74 251 117 HOH HOH A . HA 4 HOH 75 252 120 HOH HOH A . HA 4 HOH 76 253 121 HOH HOH A . HA 4 HOH 77 254 123 HOH HOH A . HA 4 HOH 78 255 126 HOH HOH A . HA 4 HOH 79 256 128 HOH HOH A . HA 4 HOH 80 257 140 HOH HOH A . HA 4 HOH 81 258 142 HOH HOH A . HA 4 HOH 82 259 146 HOH HOH A . HA 4 HOH 83 260 147 HOH HOH A . HA 4 HOH 84 261 148 HOH HOH A . HA 4 HOH 85 262 149 HOH HOH A . HA 4 HOH 86 263 150 HOH HOH A . HA 4 HOH 87 264 151 HOH HOH A . HA 4 HOH 88 265 152 HOH HOH A . HA 4 HOH 89 266 153 HOH HOH A . HA 4 HOH 90 267 154 HOH HOH A . HA 4 HOH 91 268 155 HOH HOH A . HA 4 HOH 92 269 156 HOH HOH A . HA 4 HOH 93 270 157 HOH HOH A . HA 4 HOH 94 271 158 HOH HOH A . HA 4 HOH 95 272 159 HOH HOH A . HA 4 HOH 96 273 160 HOH HOH A . HA 4 HOH 97 274 161 HOH HOH A . HA 4 HOH 98 275 162 HOH HOH A . HA 4 HOH 99 276 170 HOH HOH A . HA 4 HOH 100 277 171 HOH HOH A . HA 4 HOH 101 278 172 HOH HOH A . HA 4 HOH 102 279 173 HOH HOH A . HA 4 HOH 103 280 174 HOH HOH A . HA 4 HOH 104 281 175 HOH HOH A . IA 4 HOH 1 181 1 HOH HOH B . IA 4 HOH 2 182 3 HOH HOH B . IA 4 HOH 3 183 4 HOH HOH B . IA 4 HOH 4 184 7 HOH HOH B . IA 4 HOH 5 185 9 HOH HOH B . IA 4 HOH 6 186 186 HOH HOH B . IA 4 HOH 7 187 10 HOH HOH B . IA 4 HOH 8 188 11 HOH HOH B . IA 4 HOH 9 189 12 HOH HOH B . IA 4 HOH 10 190 13 HOH HOH B . IA 4 HOH 11 191 18 HOH HOH B . IA 4 HOH 12 192 21 HOH HOH B . IA 4 HOH 13 193 22 HOH HOH B . IA 4 HOH 14 194 194 HOH HOH B . IA 4 HOH 15 195 23 HOH HOH B . IA 4 HOH 16 196 196 HOH HOH B . IA 4 HOH 17 197 197 HOH HOH B . IA 4 HOH 18 198 198 HOH HOH B . IA 4 HOH 19 199 199 HOH HOH B . IA 4 HOH 20 200 200 HOH HOH B . IA 4 HOH 21 201 201 HOH HOH B . IA 4 HOH 22 202 202 HOH HOH B . IA 4 HOH 23 203 203 HOH HOH B . IA 4 HOH 24 204 24 HOH HOH B . IA 4 HOH 25 205 205 HOH HOH B . IA 4 HOH 26 206 206 HOH HOH B . IA 4 HOH 27 207 207 HOH HOH B . IA 4 HOH 28 208 208 HOH HOH B . IA 4 HOH 29 209 209 HOH HOH B . IA 4 HOH 30 210 26 HOH HOH B . IA 4 HOH 31 211 27 HOH HOH B . IA 4 HOH 32 212 29 HOH HOH B . IA 4 HOH 33 213 213 HOH HOH B . IA 4 HOH 34 214 30 HOH HOH B . IA 4 HOH 35 215 31 HOH HOH B . IA 4 HOH 36 216 33 HOH HOH B . IA 4 HOH 37 217 37 HOH HOH B . IA 4 HOH 38 218 38 HOH HOH B . IA 4 HOH 39 219 42 HOH HOH B . IA 4 HOH 40 220 44 HOH HOH B . IA 4 HOH 41 221 46 HOH HOH B . IA 4 HOH 42 222 48 HOH HOH B . IA 4 HOH 43 223 50 HOH HOH B . IA 4 HOH 44 224 52 HOH HOH B . IA 4 HOH 45 225 53 HOH HOH B . IA 4 HOH 46 226 54 HOH HOH B . IA 4 HOH 47 227 55 HOH HOH B . IA 4 HOH 48 228 56 HOH HOH B . IA 4 HOH 49 229 57 HOH HOH B . IA 4 HOH 50 230 60 HOH HOH B . IA 4 HOH 51 231 62 HOH HOH B . IA 4 HOH 52 232 64 HOH HOH B . IA 4 HOH 53 233 68 HOH HOH B . IA 4 HOH 54 234 69 HOH HOH B . IA 4 HOH 55 235 71 HOH HOH B . IA 4 HOH 56 236 72 HOH HOH B . IA 4 HOH 57 237 73 HOH HOH B . IA 4 HOH 58 238 74 HOH HOH B . IA 4 HOH 59 239 76 HOH HOH B . IA 4 HOH 60 240 77 HOH HOH B . IA 4 HOH 61 241 79 HOH HOH B . IA 4 HOH 62 242 81 HOH HOH B . IA 4 HOH 63 243 82 HOH HOH B . IA 4 HOH 64 244 86 HOH HOH B . IA 4 HOH 65 245 87 HOH HOH B . IA 4 HOH 66 246 89 HOH HOH B . IA 4 HOH 67 247 94 HOH HOH B . IA 4 HOH 68 248 96 HOH HOH B . IA 4 HOH 69 249 99 HOH HOH B . IA 4 HOH 70 250 102 HOH HOH B . IA 4 HOH 71 251 104 HOH HOH B . IA 4 HOH 72 252 105 HOH HOH B . IA 4 HOH 73 253 107 HOH HOH B . IA 4 HOH 74 254 109 HOH HOH B . IA 4 HOH 75 255 110 HOH HOH B . IA 4 HOH 76 256 113 HOH HOH B . IA 4 HOH 77 257 116 HOH HOH B . IA 4 HOH 78 258 118 HOH HOH B . IA 4 HOH 79 259 119 HOH HOH B . IA 4 HOH 80 260 122 HOH HOH B . IA 4 HOH 81 261 124 HOH HOH B . IA 4 HOH 82 262 125 HOH HOH B . IA 4 HOH 83 263 127 HOH HOH B . IA 4 HOH 84 264 129 HOH HOH B . IA 4 HOH 85 265 130 HOH HOH B . IA 4 HOH 86 266 131 HOH HOH B . IA 4 HOH 87 267 132 HOH HOH B . IA 4 HOH 88 268 133 HOH HOH B . IA 4 HOH 89 269 134 HOH HOH B . IA 4 HOH 90 270 135 HOH HOH B . IA 4 HOH 91 271 136 HOH HOH B . IA 4 HOH 92 272 137 HOH HOH B . IA 4 HOH 93 273 138 HOH HOH B . IA 4 HOH 94 274 139 HOH HOH B . IA 4 HOH 95 275 141 HOH HOH B . IA 4 HOH 96 276 143 HOH HOH B . IA 4 HOH 97 277 144 HOH HOH B . IA 4 HOH 98 278 145 HOH HOH B . IA 4 HOH 99 279 163 HOH HOH B . IA 4 HOH 100 280 164 HOH HOH B . IA 4 HOH 101 281 165 HOH HOH B . IA 4 HOH 102 282 166 HOH HOH B . IA 4 HOH 103 283 167 HOH HOH B . IA 4 HOH 104 284 168 HOH HOH B . IA 4 HOH 105 285 169 HOH HOH B . IA 4 HOH 106 286 176 HOH HOH B . IA 4 HOH 107 287 177 HOH HOH B . IA 4 HOH 108 288 178 HOH HOH B . IA 4 HOH 109 289 179 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A CSO 80 A CSO 76 ? CYS S-HYDROXYCYSTEINE 2 B CSO 80 B CSO 76 ? CYS S-HYDROXYCYSTEINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA 2 1,2 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7480 ? 1 MORE -22 ? 1 'SSA (A^2)' 12690 ? 2 'ABSA (A^2)' 17610 ? 2 MORE -55 ? 2 'SSA (A^2)' 22730 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 83.3635910501 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 58.7263051866 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A IOD 176 ? O IOD . 2 1 B IOD 175 ? BA IOD . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-02-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-10-26 4 'Structure model' 1 3 2017-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_diffrn_reflns_shell 2 4 'Structure model' reflns_shell # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_pdbx_diffrn_reflns_shell.percent_possible_obs' 2 4 'Structure model' '_reflns_shell.percent_possible_all' # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.900 _diffrn_reflns.pdbx_d_res_low ? _diffrn_reflns.pdbx_number_obs 45516 _diffrn_reflns.pdbx_Rmerge_I_obs 0.042 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared ? _diffrn_reflns.av_sigmaI_over_netI ? _diffrn_reflns.pdbx_redundancy ? _diffrn_reflns.pdbx_percent_possible_obs 98.40 _diffrn_reflns.number 138436 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 1.90 1.95 2868 ? 0.134 ? ? ? 84.20 1 1.95 2.00 3353 ? 0.110 ? ? ? 99.20 1 2.00 2.06 3197 ? 0.093 ? ? ? 99.30 1 2.06 2.12 3136 ? 0.088 ? ? ? 99.00 1 2.12 2.19 3031 ? 0.079 ? ? ? 99.90 1 2.19 2.27 2964 ? 0.069 ? ? ? 99.50 1 2.27 2.36 2779 ? 0.067 ? ? ? 99.60 1 2.36 2.45 2781 ? 0.067 ? ? ? 99.60 1 2.45 2.56 2598 ? 0.061 ? ? ? 99.80 1 2.56 2.69 2499 ? 0.057 ? ? ? 99.60 1 2.69 2.83 2390 ? 0.050 ? ? ? 99.90 1 2.83 3.00 2242 ? 0.045 ? ? ? 99.60 1 3.00 3.21 2116 ? 0.042 ? ? ? 99.70 1 3.21 3.47 1975 ? 0.038 ? ? ? 100.0 1 3.47 3.80 1843 ? 0.035 ? ? ? 99.40 1 3.80 4.25 1602 ? 0.032 ? ? ? 100.00 1 4.25 4.91 1452 ? 0.031 ? ? ? 99.20 1 4.91 6.01 1234 ? 0.033 ? ? ? 100.00 1 6.01 8.50 938 ? 0.030 ? ? ? 99.30 1 8.50 50.0 518 ? 0.032 ? ? ? 98.90 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 30.2803 10.1056 16.8113 0.0162 0.0161 0.0207 0.0065 -0.0010 0.0149 0.2894 0.7335 0.3365 -0.1113 -0.0407 0.2273 -0.0113 -0.0222 0.0008 -0.0600 0.0279 0.0745 -0.0389 -0.0225 -0.0166 'X-RAY DIFFRACTION' 2 ? refined 42.2236 -7.3692 12.0159 0.0241 0.0121 0.0119 -0.0058 0.0004 -0.0091 0.4193 0.6069 0.2319 0.0459 0.0006 -0.0629 -0.0030 -0.0009 -0.0282 -0.0736 0.0309 -0.0123 0.0178 0.0031 -0.0279 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A -10 ? ? A 9999 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B -10 ? ? B 9999 ? ? ? ? # loop_ _pdbx_phasing_MAD_shell.d_res_high _pdbx_phasing_MAD_shell.d_res_low _pdbx_phasing_MAD_shell.reflns_acentric _pdbx_phasing_MAD_shell.fom_acentric _pdbx_phasing_MAD_shell.reflns_centric _pdbx_phasing_MAD_shell.fom_centric _pdbx_phasing_MAD_shell.reflns _pdbx_phasing_MAD_shell.fom 9.03 12.51 120 0.693 27 0.502 147 0.658 7.42 9.03 159 0.653 24 0.494 183 0.632 6.45 7.42 186 0.692 30 0.649 216 0.686 5.78 6.45 220 0.651 26 0.540 246 0.640 5.28 5.78 238 0.651 30 0.524 268 0.637 4.90 5.28 262 0.645 27 0.495 290 0.629 4.59 4.90 275 0.664 30 0.505 306 0.647 4.33 4.59 305 0.683 26 0.395 331 0.661 4.11 4.33 310 0.629 29 0.426 340 0.611 3.92 4.11 341 0.605 26 0.394 367 0.590 3.75 3.92 344 0.597 30 0.403 375 0.580 3.60 3.75 362 0.594 29 0.327 392 0.574 3.47 3.60 390 0.639 23 0.311 413 0.621 3.36 3.47 383 0.582 32 0.416 415 0.569 3.25 3.36 406 0.602 26 0.384 432 0.589 3.15 3.25 437 0.590 28 0.364 465 0.577 3.07 3.15 429 0.580 26 0.305 456 0.564 2.98 3.07 444 0.591 30 0.338 474 0.575 2.91 2.98 456 0.605 25 0.482 483 0.597 2.84 2.91 462 0.610 25 0.251 489 0.590 2.77 2.84 493 0.596 33 0.350 526 0.580 2.71 2.77 500 0.581 21 0.338 521 0.572 2.66 2.71 503 0.591 33 0.331 538 0.573 2.60 2.66 510 0.590 25 0.478 536 0.583 2.55 2.60 534 0.585 31 0.347 565 0.572 2.51 2.55 543 0.610 25 0.435 568 0.602 2.46 2.51 528 0.573 24 0.398 555 0.566 2.42 2.46 574 0.552 31 0.354 606 0.542 2.38 2.42 530 0.523 24 0.425 556 0.519 2.34 2.38 610 0.556 31 0.342 644 0.545 2.30 2.34 575 0.537 23 0.342 602 0.528 2.27 2.30 589 0.530 27 0.394 620 0.522 2.23 2.27 617 0.514 23 0.302 642 0.505 2.20 2.23 612 0.517 29 0.272 645 0.506 2.17 2.20 624 0.495 22 0.345 646 0.490 2.14 2.17 617 0.492 30 0.380 653 0.488 2.11 2.14 647 0.469 31 0.241 689 0.458 2.09 2.11 628 0.451 23 0.288 660 0.444 2.06 2.09 650 0.452 30 0.266 690 0.443 2.03 2.06 664 0.449 26 0.337 696 0.445 2.01 2.03 683 0.425 23 0.300 716 0.422 1.99 2.01 641 0.413 28 0.371 675 0.412 1.96 1.99 716 0.430 24 0.360 748 0.427 1.94 1.96 671 0.404 29 0.239 729 0.395 1.92 1.94 575 0.425 21 0.336 660 0.415 1.90 1.92 552 0.404 26 0.338 612 0.401 # _pdbx_phasing_MR.entry_id 3QD5 _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor 54.440 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 3.000 _pdbx_phasing_MR.d_res_low_rotation 33.190 _pdbx_phasing_MR.d_res_high_translation 3.000 _pdbx_phasing_MR.d_res_low_translation 33.190 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # loop_ _phasing.method SAD MR # _phasing_MAD.entry_id 3QD5 _phasing_MAD.pdbx_d_res_high 1.90 _phasing_MAD.pdbx_d_res_low 44.44 _phasing_MAD.pdbx_reflns_acentric 21981 _phasing_MAD.pdbx_fom_acentric 0.536 _phasing_MAD.pdbx_reflns_centric 1268 _phasing_MAD.pdbx_fom_centric 0.381 _phasing_MAD.pdbx_reflns 23480 _phasing_MAD.pdbx_fom 0.527 # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 PHASER 2.1.4 'Wed Jun 24 14:00:05 2009' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 StructureStudio . ? ? ? ? 'data collection' ? ? ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE2 B GLU 104 ? ? O B HOH 256 ? ? 2.13 2 1 O A HOH 189 ? ? O A HOH 244 ? ? 2.17 3 1 I B IOD 176 ? ? O B HOH 255 ? ? 2.18 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 32 ? CG ? A ASP 36 CG 2 1 Y 1 A ASP 32 ? OD1 ? A ASP 36 OD1 3 1 Y 1 A ASP 32 ? OD2 ? A ASP 36 OD2 4 1 Y 1 A LYS 50 ? CG ? A LYS 54 CG 5 1 Y 1 A LYS 50 ? CD ? A LYS 54 CD 6 1 Y 1 A LYS 50 ? CE ? A LYS 54 CE 7 1 Y 1 A LYS 50 ? NZ ? A LYS 54 NZ 8 1 Y 1 A HIS 55 ? CG ? A HIS 59 CG 9 1 Y 1 A HIS 55 ? ND1 ? A HIS 59 ND1 10 1 Y 1 A HIS 55 ? CD2 ? A HIS 59 CD2 11 1 Y 1 A HIS 55 ? CE1 ? A HIS 59 CE1 12 1 Y 1 A HIS 55 ? NE2 ? A HIS 59 NE2 13 1 Y 1 A ARG 120 ? CG ? A ARG 124 CG 14 1 Y 1 A ARG 120 ? CD ? A ARG 124 CD 15 1 Y 1 A ARG 120 ? NE ? A ARG 124 NE 16 1 Y 1 A ARG 120 ? CZ ? A ARG 124 CZ 17 1 Y 1 A ARG 120 ? NH1 ? A ARG 124 NH1 18 1 Y 1 A ARG 120 ? NH2 ? A ARG 124 NH2 19 1 Y 1 A GLN 147 ? CG ? A GLN 151 CG 20 1 Y 1 A GLN 147 ? CD ? A GLN 151 CD 21 1 Y 1 A GLN 147 ? OE1 ? A GLN 151 OE1 22 1 Y 1 A GLN 147 ? NE2 ? A GLN 151 NE2 23 1 Y 1 A LYS 157 ? CG ? A LYS 161 CG 24 1 Y 1 A LYS 157 ? CD ? A LYS 161 CD 25 1 Y 1 A LYS 157 ? CE ? A LYS 161 CE 26 1 Y 1 A LYS 157 ? NZ ? A LYS 161 NZ 27 1 Y 1 B GLN 59 ? CG ? B GLN 63 CG 28 1 Y 1 B GLN 59 ? CD ? B GLN 63 CD 29 1 Y 1 B GLN 59 ? OE1 ? B GLN 63 OE1 30 1 Y 1 B GLN 59 ? NE2 ? B GLN 63 NE2 31 1 Y 1 B LYS 148 ? CG ? B LYS 152 CG 32 1 Y 1 B LYS 148 ? CD ? B LYS 152 CD 33 1 Y 1 B LYS 148 ? CE ? B LYS 152 CE 34 1 Y 1 B LYS 148 ? NZ ? B LYS 152 NZ 35 1 Y 1 B ASN 163 ? CG ? B ASN 167 CG 36 1 Y 1 B ASN 163 ? OD1 ? B ASN 167 OD1 37 1 Y 1 B ASN 163 ? ND2 ? B ASN 167 ND2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -3 ? A GLY 1 2 1 Y 1 A PRO -2 ? A PRO 2 3 1 Y 1 A GLY -1 ? A GLY 3 4 1 Y 1 A SER 0 ? A SER 4 5 1 Y 1 A MET 1 ? A MET 5 6 1 Y 1 A ALA 2 ? A ALA 6 7 1 Y 1 A ASN 163 ? A ASN 167 8 1 Y 1 B GLY -3 ? B GLY 1 9 1 Y 1 B PRO -2 ? B PRO 2 10 1 Y 1 B GLY -1 ? B GLY 3 11 1 Y 1 B SER 0 ? B SER 4 12 1 Y 1 B MET 1 ? B MET 5 13 1 Y 1 B ALA 2 ? B ALA 6 14 1 Y 1 B ALA 3 ? B ALA 7 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 'IODIDE ION' IOD 4 water HOH #