data_3QFQ # _entry.id 3QFQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3QFQ pdb_00003qfq 10.2210/pdb3qfq/pdb NDB NA0922 ? ? RCSB RCSB063587 ? ? WWPDB D_1000063587 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3QFQ _pdbx_database_status.recvd_initial_deposition_date 2011-01-22 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Harrison, C.J.' 1 'Meinke, G.' 2 'Bohm, A.' 3 # _citation.id primary _citation.title 'Asymmetric assembly of merkel cell polyomavirus large T-antigen origin binding domains at the viral origin.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 409 _citation.page_first 529 _citation.page_last 542 _citation.year 2011 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21501625 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2011.03.051 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Harrison, C.J.' 1 ? primary 'Meinke, G.' 2 ? primary 'Kwun, H.J.' 3 ? primary 'Rogalin, H.' 4 ? primary 'Phelan, P.J.' 5 ? primary 'Bullock, P.A.' 6 ? primary 'Chang, Y.' 7 ? primary 'Moore, P.S.' 8 ? primary 'Bohm, A.' 9 ? # _cell.entry_id 3QFQ _cell.length_a 80.400 _cell.length_b 171.340 _cell.length_c 51.280 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3QFQ _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Large T antigen' 15643.113 3 ? ? 'Origin Binding Domain (UNP Residues 308-433)' ? 2 polymer syn 'DNA (26-MER)' 7981.114 1 ? ? ? 'Merkel Cell Virus Origin Site 1/2 (Watson Strand)' 3 polymer syn 'DNA (26-MER)' 7999.142 1 ? ? ? 'Merkel Cell Virus Origin Site 1/2 (Crick Strand)' 4 water nat water 18.015 14 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MGHHHHHHGETPVPTDFPIDLSDYLSHAVYSNKTVSCFAIYTTSDKAIELYDKIEKFKVDFKSRHACELGCILLFITLSK HRVSAIKNFCSTFCTISFLICKGVNKMPEMYNNLCKPPYKLLQENKPLLNYEFQE ; ;MGHHHHHHGETPVPTDFPIDLSDYLSHAVYSNKTVSCFAIYTTSDKAIELYDKIEKFKVDFKSRHACELGCILLFITLSK HRVSAIKNFCSTFCTISFLICKGVNKMPEMYNNLCKPPYKLLQENKPLLNYEFQE ; A,B,E ? 2 polydeoxyribonucleotide no no ;(DG)(DC)(DA)(DG)(DA)(DG)(DG)(DC)(DT)(DT)(DG)(DG)(DG)(DG)(DC)(DT)(DC)(DC)(DT)(DA) (DG)(DC)(DC)(DT)(DC)(DC) ; GCAGAGGCTTGGGGCTCCTAGCCTCC W ? 3 polydeoxyribonucleotide no no ;(DC)(DG)(DG)(DA)(DG)(DG)(DC)(DT)(DA)(DG)(DG)(DA)(DG)(DC)(DC)(DC)(DC)(DA)(DA)(DG) (DC)(DC)(DT)(DC)(DT)(DG) ; CGGAGGCTAGGAGCCCCAAGCCTCTG C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 GLY n 1 10 GLU n 1 11 THR n 1 12 PRO n 1 13 VAL n 1 14 PRO n 1 15 THR n 1 16 ASP n 1 17 PHE n 1 18 PRO n 1 19 ILE n 1 20 ASP n 1 21 LEU n 1 22 SER n 1 23 ASP n 1 24 TYR n 1 25 LEU n 1 26 SER n 1 27 HIS n 1 28 ALA n 1 29 VAL n 1 30 TYR n 1 31 SER n 1 32 ASN n 1 33 LYS n 1 34 THR n 1 35 VAL n 1 36 SER n 1 37 CYS n 1 38 PHE n 1 39 ALA n 1 40 ILE n 1 41 TYR n 1 42 THR n 1 43 THR n 1 44 SER n 1 45 ASP n 1 46 LYS n 1 47 ALA n 1 48 ILE n 1 49 GLU n 1 50 LEU n 1 51 TYR n 1 52 ASP n 1 53 LYS n 1 54 ILE n 1 55 GLU n 1 56 LYS n 1 57 PHE n 1 58 LYS n 1 59 VAL n 1 60 ASP n 1 61 PHE n 1 62 LYS n 1 63 SER n 1 64 ARG n 1 65 HIS n 1 66 ALA n 1 67 CYS n 1 68 GLU n 1 69 LEU n 1 70 GLY n 1 71 CYS n 1 72 ILE n 1 73 LEU n 1 74 LEU n 1 75 PHE n 1 76 ILE n 1 77 THR n 1 78 LEU n 1 79 SER n 1 80 LYS n 1 81 HIS n 1 82 ARG n 1 83 VAL n 1 84 SER n 1 85 ALA n 1 86 ILE n 1 87 LYS n 1 88 ASN n 1 89 PHE n 1 90 CYS n 1 91 SER n 1 92 THR n 1 93 PHE n 1 94 CYS n 1 95 THR n 1 96 ILE n 1 97 SER n 1 98 PHE n 1 99 LEU n 1 100 ILE n 1 101 CYS n 1 102 LYS n 1 103 GLY n 1 104 VAL n 1 105 ASN n 1 106 LYS n 1 107 MET n 1 108 PRO n 1 109 GLU n 1 110 MET n 1 111 TYR n 1 112 ASN n 1 113 ASN n 1 114 LEU n 1 115 CYS n 1 116 LYS n 1 117 PRO n 1 118 PRO n 1 119 TYR n 1 120 LYS n 1 121 LEU n 1 122 LEU n 1 123 GLN n 1 124 GLU n 1 125 ASN n 1 126 LYS n 1 127 PRO n 1 128 LEU n 1 129 LEU n 1 130 ASN n 1 131 TYR n 1 132 GLU n 1 133 PHE n 1 134 GLN n 1 135 GLU n 2 1 DG n 2 2 DC n 2 3 DA n 2 4 DG n 2 5 DA n 2 6 DG n 2 7 DG n 2 8 DC n 2 9 DT n 2 10 DT n 2 11 DG n 2 12 DG n 2 13 DG n 2 14 DG n 2 15 DC n 2 16 DT n 2 17 DC n 2 18 DC n 2 19 DT n 2 20 DA n 2 21 DG n 2 22 DC n 2 23 DC n 2 24 DT n 2 25 DC n 2 26 DC n 3 1 DC n 3 2 DG n 3 3 DG n 3 4 DA n 3 5 DG n 3 6 DG n 3 7 DC n 3 8 DT n 3 9 DA n 3 10 DG n 3 11 DG n 3 12 DA n 3 13 DG n 3 14 DC n 3 15 DC n 3 16 DC n 3 17 DC n 3 18 DA n 3 19 DA n 3 20 DG n 3 21 DC n 3 22 DC n 3 23 DT n 3 24 DC n 3 25 DT n 3 26 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Merkel cell polyomavirus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 493803 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? ? ? ? synthesized 3 1 sample ? ? ? ? ? synthesized # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP E2IPT4_9POLY E2IPT4 1 ;ETPVPTDFPIDLSDYLSHAVYSNKTVSCFAIYTTSDKAIELYDKIEKFKVDFKSRHACELGCILLFITLSKHRVSAIKNF CSTFCTISFLICKGVNKMPEMYNNLCKPPYKLLQENKPLLNYEFQE ; 230 ? 2 PDB 3QFQ 3QFQ 2 GCAGAGGCTTGGGGCTCCTAGCCTCC 1 ? 3 PDB 3QFQ 3QFQ 3 CGGAGGCTAGGAGCCCCAAGCCTCTG 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3QFQ A 10 ? 135 ? E2IPT4 230 ? 355 ? 308 433 2 1 3QFQ B 10 ? 135 ? E2IPT4 230 ? 355 ? 308 433 3 1 3QFQ E 10 ? 135 ? E2IPT4 230 ? 355 ? 308 433 4 2 3QFQ W 1 ? 26 ? 3QFQ 1 ? 26 ? 1 26 5 3 3QFQ C 1 ? 26 ? 3QFQ 1 ? 26 ? 1 26 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3QFQ MET A 1 ? UNP E2IPT4 ? ? 'expression tag' 299 1 1 3QFQ GLY A 2 ? UNP E2IPT4 ? ? 'expression tag' 300 2 1 3QFQ HIS A 3 ? UNP E2IPT4 ? ? 'expression tag' 301 3 1 3QFQ HIS A 4 ? UNP E2IPT4 ? ? 'expression tag' 302 4 1 3QFQ HIS A 5 ? UNP E2IPT4 ? ? 'expression tag' 303 5 1 3QFQ HIS A 6 ? UNP E2IPT4 ? ? 'expression tag' 304 6 1 3QFQ HIS A 7 ? UNP E2IPT4 ? ? 'expression tag' 305 7 1 3QFQ HIS A 8 ? UNP E2IPT4 ? ? 'expression tag' 306 8 1 3QFQ GLY A 9 ? UNP E2IPT4 ? ? 'expression tag' 307 9 2 3QFQ MET B 1 ? UNP E2IPT4 ? ? 'expression tag' 299 10 2 3QFQ GLY B 2 ? UNP E2IPT4 ? ? 'expression tag' 300 11 2 3QFQ HIS B 3 ? UNP E2IPT4 ? ? 'expression tag' 301 12 2 3QFQ HIS B 4 ? UNP E2IPT4 ? ? 'expression tag' 302 13 2 3QFQ HIS B 5 ? UNP E2IPT4 ? ? 'expression tag' 303 14 2 3QFQ HIS B 6 ? UNP E2IPT4 ? ? 'expression tag' 304 15 2 3QFQ HIS B 7 ? UNP E2IPT4 ? ? 'expression tag' 305 16 2 3QFQ HIS B 8 ? UNP E2IPT4 ? ? 'expression tag' 306 17 2 3QFQ GLY B 9 ? UNP E2IPT4 ? ? 'expression tag' 307 18 3 3QFQ MET E 1 ? UNP E2IPT4 ? ? 'expression tag' 299 19 3 3QFQ GLY E 2 ? UNP E2IPT4 ? ? 'expression tag' 300 20 3 3QFQ HIS E 3 ? UNP E2IPT4 ? ? 'expression tag' 301 21 3 3QFQ HIS E 4 ? UNP E2IPT4 ? ? 'expression tag' 302 22 3 3QFQ HIS E 5 ? UNP E2IPT4 ? ? 'expression tag' 303 23 3 3QFQ HIS E 6 ? UNP E2IPT4 ? ? 'expression tag' 304 24 3 3QFQ HIS E 7 ? UNP E2IPT4 ? ? 'expression tag' 305 25 3 3QFQ HIS E 8 ? UNP E2IPT4 ? ? 'expression tag' 306 26 3 3QFQ GLY E 9 ? UNP E2IPT4 ? ? 'expression tag' 307 27 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3QFQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.81 _exptl_crystal.density_percent_sol 56.19 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.1 _exptl_crystal_grow.pdbx_details '19-21% PEG 3350, 0.2M Lithium Acetate, 50 mM Tris pH 7.1, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2010-06-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.075 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.075 # _reflns.entry_id 3QFQ _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 44.0 _reflns.d_resolution_high 2.90 _reflns.number_obs 15228 _reflns.number_all ? _reflns.percent_possible_obs 91.8 _reflns.pdbx_Rmerge_I_obs 0.131 _reflns.pdbx_Rsym_value 0.131 _reflns.pdbx_netI_over_sigmaI 10.8 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 13.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.90 _reflns_shell.d_res_low 3.06 _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_obs 0.688 _reflns_shell.pdbx_Rsym_value 0.688 _reflns_shell.meanI_over_sigI_obs 3.50 _reflns_shell.pdbx_redundancy 13.8 _reflns_shell.percent_possible_obs 100.0 _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3QFQ _refine.ls_number_reflns_obs 12396 _refine.ls_number_reflns_all 15109 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 38.157 _refine.ls_d_res_high 2.9001 _refine.ls_percent_reflns_obs 75.69 _refine.ls_R_factor_obs 0.2282 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2251 _refine.ls_R_factor_R_free 0.2858 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.76 _refine.ls_number_reflns_R_free 590 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -17.4117 _refine.aniso_B[2][2] -37.9425 _refine.aniso_B[3][3] 55.3542 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.222 _refine.solvent_model_param_bsol 25.405 _refine.pdbx_solvent_vdw_probe_radii 1.30 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 1.06 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 2NTC' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values LS_WUNIT_K1 _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details Random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.35 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error 33.73 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2709 _refine_hist.pdbx_number_atoms_nucleic_acid 1060 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 14 _refine_hist.number_atoms_total 3783 _refine_hist.d_res_high 2.9001 _refine_hist.d_res_low 38.157 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.003 ? ? 3969 'X-RAY DIFFRACTION' ? f_angle_d 0.710 ? ? 5613 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 17.368 ? ? 1485 'X-RAY DIFFRACTION' ? f_chiral_restr 0.040 ? ? 642 'X-RAY DIFFRACTION' ? f_plane_restr 0.002 ? ? 534 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.9001 3.1918 3070 0.3793 80.00 0.4167 . . 157 . . . . 'X-RAY DIFFRACTION' . 3.1918 3.6533 1988 0.2718 55.00 0.3185 . . 105 . . . . 'X-RAY DIFFRACTION' . 3.6533 4.6015 2769 0.2304 75.00 0.2931 . . 131 . . . . 'X-RAY DIFFRACTION' . 4.6015 38.1599 3979 0.1775 98.00 0.2470 . . 197 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 3QFQ _struct.title 'Asymmetric Assembly of Merkel Cell Polyomavirus Large T-antigen Origin Binding Domains at the Viral Origin' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3QFQ _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' _struct_keywords.text 'Origin binding domain, protein-DNA complex, replication, DNA BINDING PROTEIN-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? # _struct_biol.id 1 _struct_biol.details ;THE ASYMMETRIC UNIT CONTAINS THREE T-ANTIGEN ORIGIN BINDING DOMAIN MOLECULES BOUND TO A DNA TARGET THAT CONTAINS FOUR POTENTIAL BINDING SITES ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 18 ? SER A 22 ? PRO A 316 SER A 320 5 ? 5 HELX_P HELX_P2 2 THR A 43 ? ILE A 54 ? THR A 341 ILE A 352 1 ? 12 HELX_P HELX_P3 3 GLU A 55 ? PHE A 57 ? GLU A 353 PHE A 355 5 ? 3 HELX_P HELX_P4 4 ARG A 82 ? CYS A 90 ? ARG A 380 CYS A 388 1 ? 9 HELX_P HELX_P5 5 LYS A 106 ? LEU A 114 ? LYS A 404 LEU A 412 1 ? 9 HELX_P HELX_P6 6 PRO B 18 ? SER B 22 ? PRO B 316 SER B 320 5 ? 5 HELX_P HELX_P7 7 THR B 43 ? ILE B 54 ? THR B 341 ILE B 352 1 ? 12 HELX_P HELX_P8 8 ARG B 82 ? SER B 91 ? ARG B 380 SER B 389 1 ? 10 HELX_P HELX_P9 9 THR B 92 ? CYS B 94 ? THR B 390 CYS B 392 5 ? 3 HELX_P HELX_P10 10 LYS B 106 ? LEU B 114 ? LYS B 404 LEU B 412 1 ? 9 HELX_P HELX_P11 11 PRO C 18 ? SER C 22 ? PRO E 316 SER E 320 5 ? 5 HELX_P HELX_P12 12 THR C 43 ? LYS C 53 ? THR E 341 LYS E 351 1 ? 11 HELX_P HELX_P13 13 ILE C 54 ? PHE C 57 ? ILE E 352 PHE E 355 5 ? 4 HELX_P HELX_P14 14 ARG C 82 ? SER C 91 ? ARG E 380 SER E 389 1 ? 10 HELX_P HELX_P15 15 LYS C 106 ? LEU C 114 ? LYS E 404 LEU E 412 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? D DC 2 O2 ? ? ? 1_555 E DG 26 N2 ? ? W DC 2 C DG 26 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog2 hydrog ? ? D DA 3 N1 ? ? ? 1_555 E DT 25 N3 ? ? W DA 3 C DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? D DA 3 N6 ? ? ? 1_555 E DT 25 O4 ? ? W DA 3 C DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? D DG 4 N1 ? ? ? 1_555 E DC 24 N3 ? ? W DG 4 C DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? D DG 4 N2 ? ? ? 1_555 E DC 24 O2 ? ? W DG 4 C DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? D DG 4 O6 ? ? ? 1_555 E DC 24 N4 ? ? W DG 4 C DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? D DA 5 N1 ? ? ? 1_555 E DT 23 N3 ? ? W DA 5 C DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? D DA 5 N6 ? ? ? 1_555 E DT 23 O4 ? ? W DA 5 C DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? D DG 6 N1 ? ? ? 1_555 E DC 22 O2 ? ? W DG 6 C DC 22 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog10 hydrog ? ? D DG 7 N1 ? ? ? 1_555 E DC 21 N3 ? ? W DG 7 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? D DG 7 N2 ? ? ? 1_555 E DC 21 O2 ? ? W DG 7 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? D DG 7 O6 ? ? ? 1_555 E DC 21 N4 ? ? W DG 7 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? D DC 8 O2 ? ? ? 1_555 E DG 20 N2 ? ? W DC 8 C DG 20 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog14 hydrog ? ? D DT 9 O4 ? ? ? 1_555 E DA 18 N6 ? ? W DT 9 C DA 18 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog15 hydrog ? ? D DT 9 N3 ? ? ? 1_555 E DA 19 N1 ? ? W DT 9 C DA 19 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog16 hydrog ? ? D DT 10 N3 ? ? ? 1_555 E DA 18 N1 ? ? W DT 10 C DA 18 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog17 hydrog ? ? D DG 11 N1 ? ? ? 1_555 E DC 17 N3 ? ? W DG 11 C DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? D DG 11 N2 ? ? ? 1_555 E DC 17 O2 ? ? W DG 11 C DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? D DG 11 O6 ? ? ? 1_555 E DC 17 N4 ? ? W DG 11 C DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? D DG 12 N1 ? ? ? 1_555 E DC 16 N3 ? ? W DG 12 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? D DG 12 N2 ? ? ? 1_555 E DC 16 O2 ? ? W DG 12 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? D DG 12 O6 ? ? ? 1_555 E DC 16 N4 ? ? W DG 12 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? D DG 13 N1 ? ? ? 1_555 E DC 15 N3 ? ? W DG 13 C DC 15 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog24 hydrog ? ? D DG 14 N1 ? ? ? 1_555 E DC 14 N3 ? ? W DG 14 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? D DG 14 N2 ? ? ? 1_555 E DC 14 O2 ? ? W DG 14 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? D DG 14 O6 ? ? ? 1_555 E DC 14 N4 ? ? W DG 14 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? D DC 15 N4 ? ? ? 1_555 E DG 13 O6 ? ? W DC 15 C DG 13 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog28 hydrog ? ? D DT 16 N3 ? ? ? 1_555 E DA 12 N1 ? ? W DT 16 C DA 12 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog29 hydrog ? ? D DC 17 N3 ? ? ? 1_555 E DG 11 N1 ? ? W DC 17 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? D DC 17 N4 ? ? ? 1_555 E DG 11 O6 ? ? W DC 17 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? D DC 17 O2 ? ? ? 1_555 E DG 11 N2 ? ? W DC 17 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? D DC 18 N3 ? ? ? 1_555 E DG 10 N1 ? ? W DC 18 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? D DC 18 N4 ? ? ? 1_555 E DG 10 O6 ? ? W DC 18 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? D DC 18 O2 ? ? ? 1_555 E DG 10 N2 ? ? W DC 18 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? D DT 19 N3 ? ? ? 1_555 E DA 9 N1 ? ? W DT 19 C DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? D DT 19 O4 ? ? ? 1_555 E DA 9 N6 ? ? W DT 19 C DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? D DA 20 N1 ? ? ? 1_555 E DT 8 N3 ? ? W DA 20 C DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? D DA 20 N6 ? ? ? 1_555 E DT 8 O4 ? ? W DA 20 C DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? D DG 21 N1 ? ? ? 1_555 E DC 7 N3 ? ? W DG 21 C DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? D DG 21 N2 ? ? ? 1_555 E DC 7 O2 ? ? W DG 21 C DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? D DG 21 O6 ? ? ? 1_555 E DC 7 N4 ? ? W DG 21 C DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? D DC 22 N3 ? ? ? 1_555 E DG 6 N1 ? ? W DC 22 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? D DC 22 N4 ? ? ? 1_555 E DG 6 O6 ? ? W DC 22 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? D DC 22 O2 ? ? ? 1_555 E DG 6 N2 ? ? W DC 22 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? D DC 23 O2 ? ? ? 1_555 E DG 5 N2 ? ? W DC 23 C DG 5 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog46 hydrog ? ? D DT 24 N3 ? ? ? 1_555 E DA 4 N1 ? ? W DT 24 C DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? D DT 24 O4 ? ? ? 1_555 E DA 4 N6 ? ? W DT 24 C DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? D DC 25 N4 ? ? ? 1_555 E DG 3 O6 ? ? W DC 25 C DG 3 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog49 hydrog ? ? D DC 26 N3 ? ? ? 1_555 E DG 2 N1 ? ? W DC 26 C DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? D DC 26 N4 ? ? ? 1_555 E DG 2 O6 ? ? W DC 26 C DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? D DC 26 O2 ? ? ? 1_555 E DG 2 N2 ? ? W DC 26 C DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id VAL _struct_mon_prot_cis.label_seq_id 13 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id VAL _struct_mon_prot_cis.auth_seq_id 311 _struct_mon_prot_cis.auth_asym_id B _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 14 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 312 _struct_mon_prot_cis.pdbx_auth_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.46 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 4 ? C ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 CYS A 101 ? GLY A 103 ? CYS A 399 GLY A 401 A 2 VAL A 35 ? ILE A 40 ? VAL A 333 ILE A 338 A 3 CYS A 71 ? HIS A 81 ? CYS A 369 HIS A 379 A 4 VAL A 59 ? ALA A 66 ? VAL A 357 ALA A 364 A 5 LEU A 121 ? GLU A 124 ? LEU A 419 GLU A 422 B 1 VAL B 59 ? ARG B 64 ? VAL B 357 ARG B 362 B 2 CYS B 71 ? HIS B 81 ? CYS B 369 HIS B 379 B 3 VAL B 35 ? THR B 42 ? VAL B 333 THR B 340 B 4 ILE B 100 ? GLY B 103 ? ILE B 398 GLY B 401 C 1 ILE C 100 ? GLY C 103 ? ILE E 398 GLY E 401 C 2 VAL C 35 ? THR C 42 ? VAL E 333 THR E 340 C 3 CYS C 71 ? HIS C 81 ? CYS E 369 HIS E 379 C 4 VAL C 59 ? HIS C 65 ? VAL E 357 HIS E 363 C 5 LEU C 121 ? ASN C 125 ? LEU E 419 ASN E 423 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LYS A 102 ? O LYS A 400 N ALA A 39 ? N ALA A 337 A 2 3 N ILE A 40 ? N ILE A 338 O LEU A 73 ? O LEU A 371 A 3 4 O LEU A 74 ? O LEU A 372 N SER A 63 ? N SER A 361 A 4 5 N ARG A 64 ? N ARG A 362 O GLN A 123 ? O GLN A 421 B 1 2 N PHE B 61 ? N PHE B 359 O ILE B 76 ? O ILE B 374 B 2 3 O PHE B 75 ? O PHE B 373 N PHE B 38 ? N PHE B 336 B 3 4 N ALA B 39 ? N ALA B 337 O LYS B 102 ? O LYS B 400 C 1 2 O LYS C 102 ? O LYS E 400 N ALA C 39 ? N ALA E 337 C 2 3 N PHE C 38 ? N PHE E 336 O PHE C 75 ? O PHE E 373 C 3 4 O ILE C 76 ? O ILE E 374 N PHE C 61 ? N PHE E 359 C 4 5 N ARG C 64 ? N ARG E 362 O GLN C 123 ? O GLN E 421 # _database_PDB_matrix.entry_id 3QFQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3QFQ _atom_sites.fract_transf_matrix[1][1] 0.012438 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.005836 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019501 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 299 ? ? ? A . n A 1 2 GLY 2 300 ? ? ? A . n A 1 3 HIS 3 301 ? ? ? A . n A 1 4 HIS 4 302 ? ? ? A . n A 1 5 HIS 5 303 ? ? ? A . n A 1 6 HIS 6 304 ? ? ? A . n A 1 7 HIS 7 305 ? ? ? A . n A 1 8 HIS 8 306 ? ? ? A . n A 1 9 GLY 9 307 ? ? ? A . n A 1 10 GLU 10 308 ? ? ? A . n A 1 11 THR 11 309 309 THR THR A . n A 1 12 PRO 12 310 310 PRO PRO A . n A 1 13 VAL 13 311 311 VAL VAL A . n A 1 14 PRO 14 312 312 PRO PRO A . n A 1 15 THR 15 313 313 THR THR A . n A 1 16 ASP 16 314 314 ASP ASP A . n A 1 17 PHE 17 315 315 PHE PHE A . n A 1 18 PRO 18 316 316 PRO PRO A . n A 1 19 ILE 19 317 317 ILE ILE A . n A 1 20 ASP 20 318 318 ASP ASP A . n A 1 21 LEU 21 319 319 LEU LEU A . n A 1 22 SER 22 320 320 SER SER A . n A 1 23 ASP 23 321 321 ASP ASP A . n A 1 24 TYR 24 322 322 TYR TYR A . n A 1 25 LEU 25 323 323 LEU LEU A . n A 1 26 SER 26 324 324 SER SER A . n A 1 27 HIS 27 325 325 HIS HIS A . n A 1 28 ALA 28 326 326 ALA ALA A . n A 1 29 VAL 29 327 327 VAL VAL A . n A 1 30 TYR 30 328 328 TYR TYR A . n A 1 31 SER 31 329 329 SER SER A . n A 1 32 ASN 32 330 330 ASN ASN A . n A 1 33 LYS 33 331 331 LYS LYS A . n A 1 34 THR 34 332 332 THR THR A . n A 1 35 VAL 35 333 333 VAL VAL A . n A 1 36 SER 36 334 334 SER SER A . n A 1 37 CYS 37 335 335 CYS CYS A . n A 1 38 PHE 38 336 336 PHE PHE A . n A 1 39 ALA 39 337 337 ALA ALA A . n A 1 40 ILE 40 338 338 ILE ILE A . n A 1 41 TYR 41 339 339 TYR TYR A . n A 1 42 THR 42 340 340 THR THR A . n A 1 43 THR 43 341 341 THR THR A . n A 1 44 SER 44 342 342 SER SER A . n A 1 45 ASP 45 343 343 ASP ASP A . n A 1 46 LYS 46 344 344 LYS LYS A . n A 1 47 ALA 47 345 345 ALA ALA A . n A 1 48 ILE 48 346 346 ILE ILE A . n A 1 49 GLU 49 347 347 GLU GLU A . n A 1 50 LEU 50 348 348 LEU LEU A . n A 1 51 TYR 51 349 349 TYR TYR A . n A 1 52 ASP 52 350 350 ASP ASP A . n A 1 53 LYS 53 351 351 LYS LYS A . n A 1 54 ILE 54 352 352 ILE ILE A . n A 1 55 GLU 55 353 353 GLU GLU A . n A 1 56 LYS 56 354 354 LYS LYS A . n A 1 57 PHE 57 355 355 PHE PHE A . n A 1 58 LYS 58 356 356 LYS LYS A . n A 1 59 VAL 59 357 357 VAL VAL A . n A 1 60 ASP 60 358 358 ASP ASP A . n A 1 61 PHE 61 359 359 PHE PHE A . n A 1 62 LYS 62 360 360 LYS LYS A . n A 1 63 SER 63 361 361 SER SER A . n A 1 64 ARG 64 362 362 ARG ARG A . n A 1 65 HIS 65 363 363 HIS HIS A . n A 1 66 ALA 66 364 364 ALA ALA A . n A 1 67 CYS 67 365 365 CYS CYS A . n A 1 68 GLU 68 366 366 GLU GLU A . n A 1 69 LEU 69 367 367 LEU LEU A . n A 1 70 GLY 70 368 368 GLY GLY A . n A 1 71 CYS 71 369 369 CYS CYS A . n A 1 72 ILE 72 370 370 ILE ILE A . n A 1 73 LEU 73 371 371 LEU LEU A . n A 1 74 LEU 74 372 372 LEU LEU A . n A 1 75 PHE 75 373 373 PHE PHE A . n A 1 76 ILE 76 374 374 ILE ILE A . n A 1 77 THR 77 375 375 THR THR A . n A 1 78 LEU 78 376 376 LEU LEU A . n A 1 79 SER 79 377 377 SER SER A . n A 1 80 LYS 80 378 378 LYS LYS A . n A 1 81 HIS 81 379 379 HIS HIS A . n A 1 82 ARG 82 380 380 ARG ARG A . n A 1 83 VAL 83 381 381 VAL VAL A . n A 1 84 SER 84 382 382 SER SER A . n A 1 85 ALA 85 383 383 ALA ALA A . n A 1 86 ILE 86 384 384 ILE ILE A . n A 1 87 LYS 87 385 385 LYS LYS A . n A 1 88 ASN 88 386 386 ASN ASN A . n A 1 89 PHE 89 387 387 PHE PHE A . n A 1 90 CYS 90 388 388 CYS CYS A . n A 1 91 SER 91 389 389 SER SER A . n A 1 92 THR 92 390 390 THR THR A . n A 1 93 PHE 93 391 391 PHE PHE A . n A 1 94 CYS 94 392 392 CYS CYS A . n A 1 95 THR 95 393 393 THR THR A . n A 1 96 ILE 96 394 394 ILE ILE A . n A 1 97 SER 97 395 395 SER SER A . n A 1 98 PHE 98 396 396 PHE PHE A . n A 1 99 LEU 99 397 397 LEU LEU A . n A 1 100 ILE 100 398 398 ILE ILE A . n A 1 101 CYS 101 399 399 CYS CYS A . n A 1 102 LYS 102 400 400 LYS LYS A . n A 1 103 GLY 103 401 401 GLY GLY A . n A 1 104 VAL 104 402 402 VAL VAL A . n A 1 105 ASN 105 403 403 ASN ASN A . n A 1 106 LYS 106 404 404 LYS LYS A . n A 1 107 MET 107 405 405 MET MET A . n A 1 108 PRO 108 406 406 PRO PRO A . n A 1 109 GLU 109 407 407 GLU GLU A . n A 1 110 MET 110 408 408 MET MET A . n A 1 111 TYR 111 409 409 TYR TYR A . n A 1 112 ASN 112 410 410 ASN ASN A . n A 1 113 ASN 113 411 411 ASN ASN A . n A 1 114 LEU 114 412 412 LEU LEU A . n A 1 115 CYS 115 413 413 CYS CYS A . n A 1 116 LYS 116 414 414 LYS LYS A . n A 1 117 PRO 117 415 415 PRO PRO A . n A 1 118 PRO 118 416 416 PRO PRO A . n A 1 119 TYR 119 417 417 TYR TYR A . n A 1 120 LYS 120 418 418 LYS LYS A . n A 1 121 LEU 121 419 419 LEU LEU A . n A 1 122 LEU 122 420 420 LEU LEU A . n A 1 123 GLN 123 421 421 GLN GLN A . n A 1 124 GLU 124 422 422 GLU GLU A . n A 1 125 ASN 125 423 423 ASN ASN A . n A 1 126 LYS 126 424 424 LYS LYS A . n A 1 127 PRO 127 425 425 PRO PRO A . n A 1 128 LEU 128 426 426 LEU LEU A . n A 1 129 LEU 129 427 427 LEU LEU A . n A 1 130 ASN 130 428 ? ? ? A . n A 1 131 TYR 131 429 ? ? ? A . n A 1 132 GLU 132 430 ? ? ? A . n A 1 133 PHE 133 431 ? ? ? A . n A 1 134 GLN 134 432 ? ? ? A . n A 1 135 GLU 135 433 ? ? ? A . n B 1 1 MET 1 299 ? ? ? B . n B 1 2 GLY 2 300 ? ? ? B . n B 1 3 HIS 3 301 ? ? ? B . n B 1 4 HIS 4 302 ? ? ? B . n B 1 5 HIS 5 303 ? ? ? B . n B 1 6 HIS 6 304 ? ? ? B . n B 1 7 HIS 7 305 ? ? ? B . n B 1 8 HIS 8 306 ? ? ? B . n B 1 9 GLY 9 307 ? ? ? B . n B 1 10 GLU 10 308 ? ? ? B . n B 1 11 THR 11 309 309 THR THR B . n B 1 12 PRO 12 310 310 PRO PRO B . n B 1 13 VAL 13 311 311 VAL VAL B . n B 1 14 PRO 14 312 312 PRO PRO B . n B 1 15 THR 15 313 313 THR THR B . n B 1 16 ASP 16 314 314 ASP ASP B . n B 1 17 PHE 17 315 315 PHE PHE B . n B 1 18 PRO 18 316 316 PRO PRO B . n B 1 19 ILE 19 317 317 ILE ILE B . n B 1 20 ASP 20 318 318 ASP ASP B . n B 1 21 LEU 21 319 319 LEU LEU B . n B 1 22 SER 22 320 320 SER SER B . n B 1 23 ASP 23 321 321 ASP ASP B . n B 1 24 TYR 24 322 322 TYR TYR B . n B 1 25 LEU 25 323 323 LEU LEU B . n B 1 26 SER 26 324 324 SER SER B . n B 1 27 HIS 27 325 325 HIS HIS B . n B 1 28 ALA 28 326 326 ALA ALA B . n B 1 29 VAL 29 327 327 VAL VAL B . n B 1 30 TYR 30 328 328 TYR TYR B . n B 1 31 SER 31 329 329 SER SER B . n B 1 32 ASN 32 330 330 ASN ASN B . n B 1 33 LYS 33 331 331 LYS LYS B . n B 1 34 THR 34 332 332 THR THR B . n B 1 35 VAL 35 333 333 VAL VAL B . n B 1 36 SER 36 334 334 SER SER B . n B 1 37 CYS 37 335 335 CYS CYS B . n B 1 38 PHE 38 336 336 PHE PHE B . n B 1 39 ALA 39 337 337 ALA ALA B . n B 1 40 ILE 40 338 338 ILE ILE B . n B 1 41 TYR 41 339 339 TYR TYR B . n B 1 42 THR 42 340 340 THR THR B . n B 1 43 THR 43 341 341 THR THR B . n B 1 44 SER 44 342 342 SER SER B . n B 1 45 ASP 45 343 343 ASP ASP B . n B 1 46 LYS 46 344 344 LYS LYS B . n B 1 47 ALA 47 345 345 ALA ALA B . n B 1 48 ILE 48 346 346 ILE ILE B . n B 1 49 GLU 49 347 347 GLU GLU B . n B 1 50 LEU 50 348 348 LEU LEU B . n B 1 51 TYR 51 349 349 TYR TYR B . n B 1 52 ASP 52 350 350 ASP ASP B . n B 1 53 LYS 53 351 351 LYS LYS B . n B 1 54 ILE 54 352 352 ILE ILE B . n B 1 55 GLU 55 353 353 GLU GLU B . n B 1 56 LYS 56 354 354 LYS LYS B . n B 1 57 PHE 57 355 355 PHE PHE B . n B 1 58 LYS 58 356 356 LYS LYS B . n B 1 59 VAL 59 357 357 VAL VAL B . n B 1 60 ASP 60 358 358 ASP ASP B . n B 1 61 PHE 61 359 359 PHE PHE B . n B 1 62 LYS 62 360 360 LYS LYS B . n B 1 63 SER 63 361 361 SER SER B . n B 1 64 ARG 64 362 362 ARG ARG B . n B 1 65 HIS 65 363 363 HIS HIS B . n B 1 66 ALA 66 364 364 ALA ALA B . n B 1 67 CYS 67 365 365 CYS CYS B . n B 1 68 GLU 68 366 366 GLU GLU B . n B 1 69 LEU 69 367 367 LEU LEU B . n B 1 70 GLY 70 368 368 GLY GLY B . n B 1 71 CYS 71 369 369 CYS CYS B . n B 1 72 ILE 72 370 370 ILE ILE B . n B 1 73 LEU 73 371 371 LEU LEU B . n B 1 74 LEU 74 372 372 LEU LEU B . n B 1 75 PHE 75 373 373 PHE PHE B . n B 1 76 ILE 76 374 374 ILE ILE B . n B 1 77 THR 77 375 375 THR THR B . n B 1 78 LEU 78 376 376 LEU LEU B . n B 1 79 SER 79 377 377 SER SER B . n B 1 80 LYS 80 378 378 LYS LYS B . n B 1 81 HIS 81 379 379 HIS HIS B . n B 1 82 ARG 82 380 380 ARG ARG B . n B 1 83 VAL 83 381 381 VAL VAL B . n B 1 84 SER 84 382 382 SER SER B . n B 1 85 ALA 85 383 383 ALA ALA B . n B 1 86 ILE 86 384 384 ILE ILE B . n B 1 87 LYS 87 385 385 LYS LYS B . n B 1 88 ASN 88 386 386 ASN ASN B . n B 1 89 PHE 89 387 387 PHE PHE B . n B 1 90 CYS 90 388 388 CYS CYS B . n B 1 91 SER 91 389 389 SER SER B . n B 1 92 THR 92 390 390 THR THR B . n B 1 93 PHE 93 391 391 PHE PHE B . n B 1 94 CYS 94 392 392 CYS CYS B . n B 1 95 THR 95 393 393 THR THR B . n B 1 96 ILE 96 394 394 ILE ILE B . n B 1 97 SER 97 395 395 SER SER B . n B 1 98 PHE 98 396 396 PHE PHE B . n B 1 99 LEU 99 397 397 LEU LEU B . n B 1 100 ILE 100 398 398 ILE ILE B . n B 1 101 CYS 101 399 399 CYS CYS B . n B 1 102 LYS 102 400 400 LYS LYS B . n B 1 103 GLY 103 401 401 GLY GLY B . n B 1 104 VAL 104 402 402 VAL VAL B . n B 1 105 ASN 105 403 403 ASN ASN B . n B 1 106 LYS 106 404 404 LYS LYS B . n B 1 107 MET 107 405 405 MET MET B . n B 1 108 PRO 108 406 406 PRO PRO B . n B 1 109 GLU 109 407 407 GLU GLU B . n B 1 110 MET 110 408 408 MET MET B . n B 1 111 TYR 111 409 409 TYR TYR B . n B 1 112 ASN 112 410 410 ASN ASN B . n B 1 113 ASN 113 411 411 ASN ASN B . n B 1 114 LEU 114 412 412 LEU LEU B . n B 1 115 CYS 115 413 413 CYS CYS B . n B 1 116 LYS 116 414 414 LYS LYS B . n B 1 117 PRO 117 415 415 PRO PRO B . n B 1 118 PRO 118 416 416 PRO PRO B . n B 1 119 TYR 119 417 417 TYR TYR B . n B 1 120 LYS 120 418 418 LYS LYS B . n B 1 121 LEU 121 419 419 LEU LEU B . n B 1 122 LEU 122 420 420 LEU LEU B . n B 1 123 GLN 123 421 421 GLN GLN B . n B 1 124 GLU 124 422 422 GLU GLU B . n B 1 125 ASN 125 423 423 ASN ASN B . n B 1 126 LYS 126 424 424 LYS LYS B . n B 1 127 PRO 127 425 425 PRO PRO B . n B 1 128 LEU 128 426 426 LEU LEU B . n B 1 129 LEU 129 427 427 LEU LEU B . n B 1 130 ASN 130 428 428 ASN ASN B . n B 1 131 TYR 131 429 ? ? ? B . n B 1 132 GLU 132 430 ? ? ? B . n B 1 133 PHE 133 431 ? ? ? B . n B 1 134 GLN 134 432 ? ? ? B . n B 1 135 GLU 135 433 ? ? ? B . n C 1 1 MET 1 299 ? ? ? E . n C 1 2 GLY 2 300 ? ? ? E . n C 1 3 HIS 3 301 ? ? ? E . n C 1 4 HIS 4 302 ? ? ? E . n C 1 5 HIS 5 303 ? ? ? E . n C 1 6 HIS 6 304 ? ? ? E . n C 1 7 HIS 7 305 ? ? ? E . n C 1 8 HIS 8 306 ? ? ? E . n C 1 9 GLY 9 307 ? ? ? E . n C 1 10 GLU 10 308 ? ? ? E . n C 1 11 THR 11 309 ? ? ? E . n C 1 12 PRO 12 310 ? ? ? E . n C 1 13 VAL 13 311 311 VAL VAL E . n C 1 14 PRO 14 312 312 PRO PRO E . n C 1 15 THR 15 313 313 THR THR E . n C 1 16 ASP 16 314 314 ASP ASP E . n C 1 17 PHE 17 315 315 PHE PHE E . n C 1 18 PRO 18 316 316 PRO PRO E . n C 1 19 ILE 19 317 317 ILE ILE E . n C 1 20 ASP 20 318 318 ASP ASP E . n C 1 21 LEU 21 319 319 LEU LEU E . n C 1 22 SER 22 320 320 SER SER E . n C 1 23 ASP 23 321 321 ASP ASP E . n C 1 24 TYR 24 322 322 TYR TYR E . n C 1 25 LEU 25 323 323 LEU LEU E . n C 1 26 SER 26 324 324 SER SER E . n C 1 27 HIS 27 325 325 HIS HIS E . n C 1 28 ALA 28 326 326 ALA ALA E . n C 1 29 VAL 29 327 327 VAL VAL E . n C 1 30 TYR 30 328 328 TYR TYR E . n C 1 31 SER 31 329 329 SER SER E . n C 1 32 ASN 32 330 330 ASN ASN E . n C 1 33 LYS 33 331 331 LYS LYS E . n C 1 34 THR 34 332 332 THR THR E . n C 1 35 VAL 35 333 333 VAL VAL E . n C 1 36 SER 36 334 334 SER SER E . n C 1 37 CYS 37 335 335 CYS CYS E . n C 1 38 PHE 38 336 336 PHE PHE E . n C 1 39 ALA 39 337 337 ALA ALA E . n C 1 40 ILE 40 338 338 ILE ILE E . n C 1 41 TYR 41 339 339 TYR TYR E . n C 1 42 THR 42 340 340 THR THR E . n C 1 43 THR 43 341 341 THR THR E . n C 1 44 SER 44 342 342 SER SER E . n C 1 45 ASP 45 343 343 ASP ASP E . n C 1 46 LYS 46 344 344 LYS LYS E . n C 1 47 ALA 47 345 345 ALA ALA E . n C 1 48 ILE 48 346 346 ILE ILE E . n C 1 49 GLU 49 347 347 GLU GLU E . n C 1 50 LEU 50 348 348 LEU LEU E . n C 1 51 TYR 51 349 349 TYR TYR E . n C 1 52 ASP 52 350 350 ASP ASP E . n C 1 53 LYS 53 351 351 LYS LYS E . n C 1 54 ILE 54 352 352 ILE ILE E . n C 1 55 GLU 55 353 353 GLU GLU E . n C 1 56 LYS 56 354 354 LYS LYS E . n C 1 57 PHE 57 355 355 PHE PHE E . n C 1 58 LYS 58 356 356 LYS LYS E . n C 1 59 VAL 59 357 357 VAL VAL E . n C 1 60 ASP 60 358 358 ASP ASP E . n C 1 61 PHE 61 359 359 PHE PHE E . n C 1 62 LYS 62 360 360 LYS LYS E . n C 1 63 SER 63 361 361 SER SER E . n C 1 64 ARG 64 362 362 ARG ARG E . n C 1 65 HIS 65 363 363 HIS HIS E . n C 1 66 ALA 66 364 364 ALA ALA E . n C 1 67 CYS 67 365 365 CYS CYS E . n C 1 68 GLU 68 366 366 GLU GLU E . n C 1 69 LEU 69 367 367 LEU LEU E . n C 1 70 GLY 70 368 368 GLY GLY E . n C 1 71 CYS 71 369 369 CYS CYS E . n C 1 72 ILE 72 370 370 ILE ILE E . n C 1 73 LEU 73 371 371 LEU LEU E . n C 1 74 LEU 74 372 372 LEU LEU E . n C 1 75 PHE 75 373 373 PHE PHE E . n C 1 76 ILE 76 374 374 ILE ILE E . n C 1 77 THR 77 375 375 THR THR E . n C 1 78 LEU 78 376 376 LEU LEU E . n C 1 79 SER 79 377 377 SER SER E . n C 1 80 LYS 80 378 378 LYS LYS E . n C 1 81 HIS 81 379 379 HIS HIS E . n C 1 82 ARG 82 380 380 ARG ARG E . n C 1 83 VAL 83 381 381 VAL VAL E . n C 1 84 SER 84 382 382 SER SER E . n C 1 85 ALA 85 383 383 ALA ALA E . n C 1 86 ILE 86 384 384 ILE ILE E . n C 1 87 LYS 87 385 385 LYS LYS E . n C 1 88 ASN 88 386 386 ASN ASN E . n C 1 89 PHE 89 387 387 PHE PHE E . n C 1 90 CYS 90 388 388 CYS CYS E . n C 1 91 SER 91 389 389 SER SER E . n C 1 92 THR 92 390 390 THR THR E . n C 1 93 PHE 93 391 391 PHE PHE E . n C 1 94 CYS 94 392 392 CYS CYS E . n C 1 95 THR 95 393 393 THR THR E . n C 1 96 ILE 96 394 394 ILE ILE E . n C 1 97 SER 97 395 395 SER SER E . n C 1 98 PHE 98 396 396 PHE PHE E . n C 1 99 LEU 99 397 397 LEU LEU E . n C 1 100 ILE 100 398 398 ILE ILE E . n C 1 101 CYS 101 399 399 CYS CYS E . n C 1 102 LYS 102 400 400 LYS LYS E . n C 1 103 GLY 103 401 401 GLY GLY E . n C 1 104 VAL 104 402 402 VAL VAL E . n C 1 105 ASN 105 403 403 ASN ASN E . n C 1 106 LYS 106 404 404 LYS LYS E . n C 1 107 MET 107 405 405 MET MET E . n C 1 108 PRO 108 406 406 PRO PRO E . n C 1 109 GLU 109 407 407 GLU GLU E . n C 1 110 MET 110 408 408 MET MET E . n C 1 111 TYR 111 409 409 TYR TYR E . n C 1 112 ASN 112 410 410 ASN ASN E . n C 1 113 ASN 113 411 411 ASN ASN E . n C 1 114 LEU 114 412 412 LEU LEU E . n C 1 115 CYS 115 413 413 CYS CYS E . n C 1 116 LYS 116 414 414 LYS LYS E . n C 1 117 PRO 117 415 415 PRO PRO E . n C 1 118 PRO 118 416 416 PRO PRO E . n C 1 119 TYR 119 417 417 TYR TYR E . n C 1 120 LYS 120 418 418 LYS LYS E . n C 1 121 LEU 121 419 419 LEU LEU E . n C 1 122 LEU 122 420 420 LEU LEU E . n C 1 123 GLN 123 421 421 GLN GLN E . n C 1 124 GLU 124 422 422 GLU GLU E . n C 1 125 ASN 125 423 423 ASN ASN E . n C 1 126 LYS 126 424 424 LYS LYS E . n C 1 127 PRO 127 425 425 PRO PRO E . n C 1 128 LEU 128 426 426 LEU LEU E . n C 1 129 LEU 129 427 427 LEU LEU E . n C 1 130 ASN 130 428 ? ? ? E . n C 1 131 TYR 131 429 ? ? ? E . n C 1 132 GLU 132 430 ? ? ? E . n C 1 133 PHE 133 431 ? ? ? E . n C 1 134 GLN 134 432 ? ? ? E . n C 1 135 GLU 135 433 ? ? ? E . n D 2 1 DG 1 1 1 DG DG W . n D 2 2 DC 2 2 2 DC DC W . n D 2 3 DA 3 3 3 DA DA W . n D 2 4 DG 4 4 4 DG DG W . n D 2 5 DA 5 5 5 DA DA W . n D 2 6 DG 6 6 6 DG DG W . n D 2 7 DG 7 7 7 DG DG W . n D 2 8 DC 8 8 8 DC DC W . n D 2 9 DT 9 9 9 DT DT W . n D 2 10 DT 10 10 10 DT DT W . n D 2 11 DG 11 11 11 DG DG W . n D 2 12 DG 12 12 12 DG DG W . n D 2 13 DG 13 13 13 DG DG W . n D 2 14 DG 14 14 14 DG DG W . n D 2 15 DC 15 15 15 DC DC W . n D 2 16 DT 16 16 16 DT DT W . n D 2 17 DC 17 17 17 DC DC W . n D 2 18 DC 18 18 18 DC DC W . n D 2 19 DT 19 19 19 DT DT W . n D 2 20 DA 20 20 20 DA DA W . n D 2 21 DG 21 21 21 DG DG W . n D 2 22 DC 22 22 22 DC DC W . n D 2 23 DC 23 23 23 DC DC W . n D 2 24 DT 24 24 24 DT DT W . n D 2 25 DC 25 25 25 DC DC W . n D 2 26 DC 26 26 26 DC DC W . n E 3 1 DC 1 1 1 DC DC C . n E 3 2 DG 2 2 2 DG DG C . n E 3 3 DG 3 3 3 DG DG C . n E 3 4 DA 4 4 4 DA DA C . n E 3 5 DG 5 5 5 DG DG C . n E 3 6 DG 6 6 6 DG DG C . n E 3 7 DC 7 7 7 DC DC C . n E 3 8 DT 8 8 8 DT DT C . n E 3 9 DA 9 9 9 DA DA C . n E 3 10 DG 10 10 10 DG DG C . n E 3 11 DG 11 11 11 DG DG C . n E 3 12 DA 12 12 12 DA DA C . n E 3 13 DG 13 13 13 DG DG C . n E 3 14 DC 14 14 14 DC DC C . n E 3 15 DC 15 15 15 DC DC C . n E 3 16 DC 16 16 16 DC DC C . n E 3 17 DC 17 17 17 DC DC C . n E 3 18 DA 18 18 18 DA DA C . n E 3 19 DA 19 19 19 DA DA C . n E 3 20 DG 20 20 20 DG DG C . n E 3 21 DC 21 21 21 DC DC C . n E 3 22 DC 22 22 22 DC DC C . n E 3 23 DT 23 23 23 DT DT C . n E 3 24 DC 24 24 24 DC DC C . n E 3 25 DT 25 25 25 DT DT C . n E 3 26 DG 26 26 26 DG DG C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code F 4 HOH 1 2 2 HOH HOH A . F 4 HOH 2 3 3 HOH HOH A . F 4 HOH 3 4 4 HOH HOH A . F 4 HOH 4 8 8 HOH HOH A . F 4 HOH 5 10 10 HOH HOH A . F 4 HOH 6 13 13 HOH HOH A . F 4 HOH 7 14 14 HOH HOH A . G 4 HOH 1 1 1 HOH HOH B . H 4 HOH 1 5 5 HOH HOH E . H 4 HOH 2 9 9 HOH HOH E . H 4 HOH 3 12 12 HOH HOH E . I 4 HOH 1 27 7 HOH HOH W . I 4 HOH 2 28 11 HOH HOH W . J 4 HOH 1 27 6 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6980 ? 1 MORE -60 ? 1 'SSA (A^2)' 24240 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-04-27 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 37.6880 -57.3728 -34.9444 0.1436 0.3327 0.1075 -0.0464 0.0470 0.0077 4.4780 4.4325 1.9187 -0.7074 -0.6384 2.7408 -0.3562 0.7156 -0.1081 -0.0071 0.1568 0.1141 -0.0164 -0.2082 0.0002 'X-RAY DIFFRACTION' 2 ? refined 23.4875 3.7913 -4.4397 0.5634 0.4889 0.3574 -0.0014 -0.1306 0.1502 1.8270 3.0942 3.0137 0.4368 0.4842 1.2096 -0.0742 -0.4863 0.0110 0.6998 0.1197 -0.0715 -0.6797 0.0041 0.0002 'X-RAY DIFFRACTION' 3 ? refined 25.0295 -29.7798 -1.3244 0.4702 0.4676 0.5158 0.0967 -0.0701 -0.0557 0.7648 2.0569 2.7737 -0.9738 -0.2691 -1.0784 -0.5251 -0.3049 0.1700 1.0339 -0.0906 -0.5637 0.2626 0.2258 0.0002 'X-RAY DIFFRACTION' 4 ? refined 22.9423 -30.5577 -24.0542 0.5193 0.4638 0.9117 0.0182 -0.1126 0.0469 1.0253 2.0840 0.6869 -1.4454 -1.0173 1.3641 0.2083 0.1250 -0.2151 0.0769 -0.6267 0.9125 -0.1846 -0.1603 0.0012 'X-RAY DIFFRACTION' 5 ? refined 21.9547 -26.7515 -23.0761 0.5671 0.5004 0.5388 -0.0127 0.0794 -0.0112 2.4104 2.0197 1.0272 -1.7062 0.0683 0.9686 0.1833 0.2047 0.1407 -0.5493 -0.6276 -0.5609 -0.0654 -0.0439 0.0003 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? '(chain A)' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? '(chain B)' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? '(chain E)' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? '(chain R)' 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? '(chain W)' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.6.4_486)' ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N B PRO 415 ? ? CA B PRO 415 ? ? CB B PRO 415 ? ? 110.64 103.30 7.34 1.20 N 2 1 "O4'" W DC 22 ? ? "C1'" W DC 22 ? ? N1 W DC 22 ? ? 110.13 108.30 1.83 0.30 N 3 1 "O4'" C DC 21 ? ? "C1'" C DC 21 ? ? N1 C DC 21 ? ? 110.24 108.30 1.94 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 314 ? ? 76.44 145.41 2 1 LEU A 319 ? ? -150.54 10.58 3 1 SER A 320 ? ? -78.59 31.06 4 1 SER A 334 ? ? -132.33 -45.05 5 1 THR A 340 ? ? -107.16 -139.05 6 1 GLU A 353 ? ? -59.15 -9.17 7 1 ASP A 358 ? ? -90.89 -60.10 8 1 CYS A 365 ? ? -87.60 -118.97 9 1 GLU A 366 ? ? -124.29 -64.97 10 1 THR A 393 ? ? 45.52 29.31 11 1 ILE A 394 ? ? -175.01 -171.62 12 1 SER A 395 ? ? 68.38 -145.61 13 1 LYS A 418 ? ? -175.25 139.28 14 1 GLN A 421 ? ? -170.88 130.87 15 1 VAL B 311 ? ? 139.33 -52.70 16 1 PRO B 312 ? ? -107.14 -103.30 17 1 THR B 313 ? ? -129.52 -51.85 18 1 HIS B 325 ? ? -106.88 58.13 19 1 TYR B 328 ? ? -107.31 43.35 20 1 GLU B 353 ? ? -75.08 33.00 21 1 LYS B 356 ? ? 50.38 87.59 22 1 CYS B 369 ? ? -169.39 107.87 23 1 CYS B 392 ? ? -63.94 91.39 24 1 LYS B 414 ? ? -74.27 -133.23 25 1 LYS B 418 ? ? -123.95 -156.37 26 1 LEU B 419 ? ? -124.80 -107.42 27 1 LEU B 420 ? ? 79.45 -83.06 28 1 GLN B 421 ? ? 43.23 -108.46 29 1 GLU B 422 ? ? -80.71 -143.43 30 1 ASN B 423 ? ? -160.31 -54.04 31 1 PRO B 425 ? ? -88.03 -99.60 32 1 ASP E 314 ? ? 70.23 141.17 33 1 HIS E 325 ? ? -103.82 53.26 34 1 GLU E 353 ? ? -68.60 3.18 35 1 THR E 393 ? ? -149.00 -37.24 36 1 LYS E 404 ? ? -102.72 74.20 37 1 PRO E 415 ? ? -25.89 -59.01 38 1 LYS E 424 ? ? 87.74 148.96 39 1 PRO E 425 ? ? -61.19 -102.03 40 1 LEU E 426 ? ? -140.66 -127.26 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 GLN _pdbx_validate_peptide_omega.auth_asym_id_1 B _pdbx_validate_peptide_omega.auth_seq_id_1 421 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 GLU _pdbx_validate_peptide_omega.auth_asym_id_2 B _pdbx_validate_peptide_omega.auth_seq_id_2 422 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -138.07 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A THR 309 ? OG1 ? A THR 11 OG1 2 1 Y 1 A THR 309 ? CG2 ? A THR 11 CG2 3 1 Y 1 A PRO 312 ? CG ? A PRO 14 CG 4 1 Y 1 A PRO 312 ? CD ? A PRO 14 CD 5 1 Y 1 A THR 340 ? OG1 ? A THR 42 OG1 6 1 Y 1 A THR 340 ? CG2 ? A THR 42 CG2 7 1 Y 1 A THR 341 ? OG1 ? A THR 43 OG1 8 1 Y 1 A THR 341 ? CG2 ? A THR 43 CG2 9 1 Y 1 A LYS 344 ? CG ? A LYS 46 CG 10 1 Y 1 A LYS 344 ? CD ? A LYS 46 CD 11 1 Y 1 A LYS 344 ? CE ? A LYS 46 CE 12 1 Y 1 A LYS 344 ? NZ ? A LYS 46 NZ 13 1 Y 1 A ILE 346 ? CG1 ? A ILE 48 CG1 14 1 Y 1 A ILE 346 ? CG2 ? A ILE 48 CG2 15 1 Y 1 A ILE 346 ? CD1 ? A ILE 48 CD1 16 1 Y 1 A LYS 351 ? CG ? A LYS 53 CG 17 1 Y 1 A LYS 351 ? CD ? A LYS 53 CD 18 1 Y 1 A LYS 351 ? CE ? A LYS 53 CE 19 1 Y 1 A LYS 351 ? NZ ? A LYS 53 NZ 20 1 Y 1 A ILE 352 ? CD1 ? A ILE 54 CD1 21 1 Y 1 A LYS 356 ? CG ? A LYS 58 CG 22 1 Y 1 A LYS 356 ? CD ? A LYS 58 CD 23 1 Y 1 A LYS 356 ? CE ? A LYS 58 CE 24 1 Y 1 A LYS 356 ? NZ ? A LYS 58 NZ 25 1 Y 1 A CYS 365 ? SG ? A CYS 67 SG 26 1 Y 1 A LEU 367 ? CG ? A LEU 69 CG 27 1 Y 1 A LEU 367 ? CD1 ? A LEU 69 CD1 28 1 Y 1 A LEU 367 ? CD2 ? A LEU 69 CD2 29 1 Y 1 A LEU 376 ? CG ? A LEU 78 CG 30 1 Y 1 A LEU 376 ? CD1 ? A LEU 78 CD1 31 1 Y 1 A LEU 376 ? CD2 ? A LEU 78 CD2 32 1 Y 1 A LYS 385 ? CG ? A LYS 87 CG 33 1 Y 1 A LYS 385 ? CD ? A LYS 87 CD 34 1 Y 1 A LYS 385 ? CE ? A LYS 87 CE 35 1 Y 1 A LYS 385 ? NZ ? A LYS 87 NZ 36 1 Y 1 A ILE 394 ? CG1 ? A ILE 96 CG1 37 1 Y 1 A ILE 394 ? CG2 ? A ILE 96 CG2 38 1 Y 1 A ILE 394 ? CD1 ? A ILE 96 CD1 39 1 Y 1 A LYS 414 ? CG ? A LYS 116 CG 40 1 Y 1 A LYS 414 ? CD ? A LYS 116 CD 41 1 Y 1 A LYS 414 ? CE ? A LYS 116 CE 42 1 Y 1 A LYS 414 ? NZ ? A LYS 116 NZ 43 1 Y 1 A LYS 418 ? CG ? A LYS 120 CG 44 1 Y 1 A LYS 418 ? CD ? A LYS 120 CD 45 1 Y 1 A LYS 418 ? CE ? A LYS 120 CE 46 1 Y 1 A LYS 418 ? NZ ? A LYS 120 NZ 47 1 Y 1 A LEU 427 ? CG ? A LEU 129 CG 48 1 Y 1 A LEU 427 ? CD1 ? A LEU 129 CD1 49 1 Y 1 A LEU 427 ? CD2 ? A LEU 129 CD2 50 1 Y 1 B THR 309 ? OG1 ? B THR 11 OG1 51 1 Y 1 B THR 309 ? CG2 ? B THR 11 CG2 52 1 Y 1 B ILE 346 ? CG1 ? B ILE 48 CG1 53 1 Y 1 B ILE 346 ? CG2 ? B ILE 48 CG2 54 1 Y 1 B ILE 346 ? CD1 ? B ILE 48 CD1 55 1 Y 1 B LYS 351 ? CG ? B LYS 53 CG 56 1 Y 1 B LYS 351 ? CD ? B LYS 53 CD 57 1 Y 1 B LYS 351 ? CE ? B LYS 53 CE 58 1 Y 1 B LYS 351 ? NZ ? B LYS 53 NZ 59 1 Y 1 B ILE 352 ? CD1 ? B ILE 54 CD1 60 1 Y 1 B LYS 356 ? CG ? B LYS 58 CG 61 1 Y 1 B LYS 356 ? CD ? B LYS 58 CD 62 1 Y 1 B LYS 356 ? CE ? B LYS 58 CE 63 1 Y 1 B LYS 356 ? NZ ? B LYS 58 NZ 64 1 Y 1 B GLU 366 ? CG ? B GLU 68 CG 65 1 Y 1 B GLU 366 ? CD ? B GLU 68 CD 66 1 Y 1 B GLU 366 ? OE1 ? B GLU 68 OE1 67 1 Y 1 B GLU 366 ? OE2 ? B GLU 68 OE2 68 1 Y 1 B LEU 367 ? CG ? B LEU 69 CG 69 1 Y 1 B LEU 367 ? CD1 ? B LEU 69 CD1 70 1 Y 1 B LEU 367 ? CD2 ? B LEU 69 CD2 71 1 Y 1 B LYS 385 ? CG ? B LYS 87 CG 72 1 Y 1 B LYS 385 ? CD ? B LYS 87 CD 73 1 Y 1 B LYS 385 ? CE ? B LYS 87 CE 74 1 Y 1 B LYS 385 ? NZ ? B LYS 87 NZ 75 1 Y 1 B CYS 392 ? SG ? B CYS 94 SG 76 1 Y 1 B THR 393 ? OG1 ? B THR 95 OG1 77 1 Y 1 B THR 393 ? CG2 ? B THR 95 CG2 78 1 Y 1 B ILE 394 ? CG1 ? B ILE 96 CG1 79 1 Y 1 B ILE 394 ? CG2 ? B ILE 96 CG2 80 1 Y 1 B ILE 394 ? CD1 ? B ILE 96 CD1 81 1 Y 1 B LYS 400 ? CG ? B LYS 102 CG 82 1 Y 1 B LYS 400 ? CD ? B LYS 102 CD 83 1 Y 1 B LYS 400 ? CE ? B LYS 102 CE 84 1 Y 1 B LYS 400 ? NZ ? B LYS 102 NZ 85 1 Y 1 B LYS 414 ? CG ? B LYS 116 CG 86 1 Y 1 B LYS 414 ? CD ? B LYS 116 CD 87 1 Y 1 B LYS 414 ? CE ? B LYS 116 CE 88 1 Y 1 B LYS 414 ? NZ ? B LYS 116 NZ 89 1 Y 1 B PRO 415 ? CG ? B PRO 117 CG 90 1 Y 1 B PRO 415 ? CD ? B PRO 117 CD 91 1 Y 1 B LYS 418 ? CG ? B LYS 120 CG 92 1 Y 1 B LYS 418 ? CD ? B LYS 120 CD 93 1 Y 1 B LYS 418 ? CE ? B LYS 120 CE 94 1 Y 1 B LYS 418 ? NZ ? B LYS 120 NZ 95 1 Y 1 B GLN 421 ? CG ? B GLN 123 CG 96 1 Y 1 B GLN 421 ? CD ? B GLN 123 CD 97 1 Y 1 B GLN 421 ? OE1 ? B GLN 123 OE1 98 1 Y 1 B GLN 421 ? NE2 ? B GLN 123 NE2 99 1 Y 1 B LEU 426 ? CG ? B LEU 128 CG 100 1 Y 1 B LEU 426 ? CD1 ? B LEU 128 CD1 101 1 Y 1 B LEU 426 ? CD2 ? B LEU 128 CD2 102 1 Y 1 B LEU 427 ? CG ? B LEU 129 CG 103 1 Y 1 B LEU 427 ? CD1 ? B LEU 129 CD1 104 1 Y 1 B LEU 427 ? CD2 ? B LEU 129 CD2 105 1 Y 1 B ASN 428 ? CG ? B ASN 130 CG 106 1 Y 1 B ASN 428 ? OD1 ? B ASN 130 OD1 107 1 Y 1 B ASN 428 ? ND2 ? B ASN 130 ND2 108 1 Y 0 E ILE 338 ? CD1 ? C ILE 40 CD1 109 1 Y 1 E ILE 346 ? CG1 ? C ILE 48 CG1 110 1 Y 1 E ILE 346 ? CG2 ? C ILE 48 CG2 111 1 Y 1 E ILE 346 ? CD1 ? C ILE 48 CD1 112 1 Y 1 E ILE 352 ? CD1 ? C ILE 54 CD1 113 1 Y 1 E LYS 356 ? CG ? C LYS 58 CG 114 1 Y 1 E LYS 356 ? CD ? C LYS 58 CD 115 1 Y 1 E LYS 356 ? CE ? C LYS 58 CE 116 1 Y 1 E LYS 356 ? NZ ? C LYS 58 NZ 117 1 Y 1 E LEU 367 ? CG ? C LEU 69 CG 118 1 Y 1 E LEU 367 ? CD1 ? C LEU 69 CD1 119 1 Y 1 E LEU 367 ? CD2 ? C LEU 69 CD2 120 1 Y 1 E LYS 385 ? CE ? C LYS 87 CE 121 1 Y 1 E LYS 385 ? NZ ? C LYS 87 NZ 122 1 Y 1 E THR 393 ? OG1 ? C THR 95 OG1 123 1 Y 1 E THR 393 ? CG2 ? C THR 95 CG2 124 1 Y 1 E ILE 394 ? CG1 ? C ILE 96 CG1 125 1 Y 1 E ILE 394 ? CG2 ? C ILE 96 CG2 126 1 Y 1 E ILE 394 ? CD1 ? C ILE 96 CD1 127 1 Y 1 E SER 395 ? CB ? C SER 97 CB 128 1 Y 1 E SER 395 ? OG ? C SER 97 OG 129 1 Y 1 E LYS 414 ? CG ? C LYS 116 CG 130 1 Y 1 E LYS 414 ? CD ? C LYS 116 CD 131 1 Y 1 E LYS 414 ? CE ? C LYS 116 CE 132 1 Y 1 E LYS 414 ? NZ ? C LYS 116 NZ 133 1 Y 1 E LYS 418 ? CG ? C LYS 120 CG 134 1 Y 1 E LYS 418 ? CD ? C LYS 120 CD 135 1 Y 1 E LYS 418 ? CE ? C LYS 120 CE 136 1 Y 1 E LYS 418 ? NZ ? C LYS 120 NZ 137 1 Y 1 E ASN 423 ? CG ? C ASN 125 CG 138 1 Y 1 E ASN 423 ? OD1 ? C ASN 125 OD1 139 1 Y 1 E ASN 423 ? ND2 ? C ASN 125 ND2 140 1 Y 1 E LEU 426 ? CG ? C LEU 128 CG 141 1 Y 1 E LEU 426 ? CD1 ? C LEU 128 CD1 142 1 Y 1 E LEU 426 ? CD2 ? C LEU 128 CD2 143 1 Y 1 E LEU 427 ? CG ? C LEU 129 CG 144 1 Y 1 E LEU 427 ? CD1 ? C LEU 129 CD1 145 1 Y 1 E LEU 427 ? CD2 ? C LEU 129 CD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 299 ? A MET 1 2 1 Y 1 A GLY 300 ? A GLY 2 3 1 Y 1 A HIS 301 ? A HIS 3 4 1 Y 1 A HIS 302 ? A HIS 4 5 1 Y 1 A HIS 303 ? A HIS 5 6 1 Y 1 A HIS 304 ? A HIS 6 7 1 Y 1 A HIS 305 ? A HIS 7 8 1 Y 1 A HIS 306 ? A HIS 8 9 1 Y 1 A GLY 307 ? A GLY 9 10 1 Y 1 A GLU 308 ? A GLU 10 11 1 Y 1 A ASN 428 ? A ASN 130 12 1 Y 1 A TYR 429 ? A TYR 131 13 1 Y 1 A GLU 430 ? A GLU 132 14 1 Y 1 A PHE 431 ? A PHE 133 15 1 Y 1 A GLN 432 ? A GLN 134 16 1 Y 1 A GLU 433 ? A GLU 135 17 1 Y 1 B MET 299 ? B MET 1 18 1 Y 1 B GLY 300 ? B GLY 2 19 1 Y 1 B HIS 301 ? B HIS 3 20 1 Y 1 B HIS 302 ? B HIS 4 21 1 Y 1 B HIS 303 ? B HIS 5 22 1 Y 1 B HIS 304 ? B HIS 6 23 1 Y 1 B HIS 305 ? B HIS 7 24 1 Y 1 B HIS 306 ? B HIS 8 25 1 Y 1 B GLY 307 ? B GLY 9 26 1 Y 1 B GLU 308 ? B GLU 10 27 1 Y 1 B TYR 429 ? B TYR 131 28 1 Y 1 B GLU 430 ? B GLU 132 29 1 Y 1 B PHE 431 ? B PHE 133 30 1 Y 1 B GLN 432 ? B GLN 134 31 1 Y 1 B GLU 433 ? B GLU 135 32 1 Y 1 E MET 299 ? C MET 1 33 1 Y 1 E GLY 300 ? C GLY 2 34 1 Y 1 E HIS 301 ? C HIS 3 35 1 Y 1 E HIS 302 ? C HIS 4 36 1 Y 1 E HIS 303 ? C HIS 5 37 1 Y 1 E HIS 304 ? C HIS 6 38 1 Y 1 E HIS 305 ? C HIS 7 39 1 Y 1 E HIS 306 ? C HIS 8 40 1 Y 1 E GLY 307 ? C GLY 9 41 1 Y 1 E GLU 308 ? C GLU 10 42 1 Y 1 E THR 309 ? C THR 11 43 1 Y 1 E PRO 310 ? C PRO 12 44 1 Y 1 E ASN 428 ? C ASN 130 45 1 Y 1 E TYR 429 ? C TYR 131 46 1 Y 1 E GLU 430 ? C GLU 132 47 1 Y 1 E PHE 431 ? C PHE 133 48 1 Y 1 E GLN 432 ? C GLN 134 49 1 Y 1 E GLU 433 ? C GLU 135 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 PHE N N N N 393 PHE CA C N S 394 PHE C C N N 395 PHE O O N N 396 PHE CB C N N 397 PHE CG C Y N 398 PHE CD1 C Y N 399 PHE CD2 C Y N 400 PHE CE1 C Y N 401 PHE CE2 C Y N 402 PHE CZ C Y N 403 PHE OXT O N N 404 PHE H H N N 405 PHE H2 H N N 406 PHE HA H N N 407 PHE HB2 H N N 408 PHE HB3 H N N 409 PHE HD1 H N N 410 PHE HD2 H N N 411 PHE HE1 H N N 412 PHE HE2 H N N 413 PHE HZ H N N 414 PHE HXT H N N 415 PRO N N N N 416 PRO CA C N S 417 PRO C C N N 418 PRO O O N N 419 PRO CB C N N 420 PRO CG C N N 421 PRO CD C N N 422 PRO OXT O N N 423 PRO H H N N 424 PRO HA H N N 425 PRO HB2 H N N 426 PRO HB3 H N N 427 PRO HG2 H N N 428 PRO HG3 H N N 429 PRO HD2 H N N 430 PRO HD3 H N N 431 PRO HXT H N N 432 SER N N N N 433 SER CA C N S 434 SER C C N N 435 SER O O N N 436 SER CB C N N 437 SER OG O N N 438 SER OXT O N N 439 SER H H N N 440 SER H2 H N N 441 SER HA H N N 442 SER HB2 H N N 443 SER HB3 H N N 444 SER HG H N N 445 SER HXT H N N 446 THR N N N N 447 THR CA C N S 448 THR C C N N 449 THR O O N N 450 THR CB C N R 451 THR OG1 O N N 452 THR CG2 C N N 453 THR OXT O N N 454 THR H H N N 455 THR H2 H N N 456 THR HA H N N 457 THR HB H N N 458 THR HG1 H N N 459 THR HG21 H N N 460 THR HG22 H N N 461 THR HG23 H N N 462 THR HXT H N N 463 TYR N N N N 464 TYR CA C N S 465 TYR C C N N 466 TYR O O N N 467 TYR CB C N N 468 TYR CG C Y N 469 TYR CD1 C Y N 470 TYR CD2 C Y N 471 TYR CE1 C Y N 472 TYR CE2 C Y N 473 TYR CZ C Y N 474 TYR OH O N N 475 TYR OXT O N N 476 TYR H H N N 477 TYR H2 H N N 478 TYR HA H N N 479 TYR HB2 H N N 480 TYR HB3 H N N 481 TYR HD1 H N N 482 TYR HD2 H N N 483 TYR HE1 H N N 484 TYR HE2 H N N 485 TYR HH H N N 486 TYR HXT H N N 487 VAL N N N N 488 VAL CA C N S 489 VAL C C N N 490 VAL O O N N 491 VAL CB C N N 492 VAL CG1 C N N 493 VAL CG2 C N N 494 VAL OXT O N N 495 VAL H H N N 496 VAL H2 H N N 497 VAL HA H N N 498 VAL HB H N N 499 VAL HG11 H N N 500 VAL HG12 H N N 501 VAL HG13 H N N 502 VAL HG21 H N N 503 VAL HG22 H N N 504 VAL HG23 H N N 505 VAL HXT H N N 506 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 THR N CA sing N N 439 THR N H sing N N 440 THR N H2 sing N N 441 THR CA C sing N N 442 THR CA CB sing N N 443 THR CA HA sing N N 444 THR C O doub N N 445 THR C OXT sing N N 446 THR CB OG1 sing N N 447 THR CB CG2 sing N N 448 THR CB HB sing N N 449 THR OG1 HG1 sing N N 450 THR CG2 HG21 sing N N 451 THR CG2 HG22 sing N N 452 THR CG2 HG23 sing N N 453 THR OXT HXT sing N N 454 TYR N CA sing N N 455 TYR N H sing N N 456 TYR N H2 sing N N 457 TYR CA C sing N N 458 TYR CA CB sing N N 459 TYR CA HA sing N N 460 TYR C O doub N N 461 TYR C OXT sing N N 462 TYR CB CG sing N N 463 TYR CB HB2 sing N N 464 TYR CB HB3 sing N N 465 TYR CG CD1 doub Y N 466 TYR CG CD2 sing Y N 467 TYR CD1 CE1 sing Y N 468 TYR CD1 HD1 sing N N 469 TYR CD2 CE2 doub Y N 470 TYR CD2 HD2 sing N N 471 TYR CE1 CZ doub Y N 472 TYR CE1 HE1 sing N N 473 TYR CE2 CZ sing Y N 474 TYR CE2 HE2 sing N N 475 TYR CZ OH sing N N 476 TYR OH HH sing N N 477 TYR OXT HXT sing N N 478 VAL N CA sing N N 479 VAL N H sing N N 480 VAL N H2 sing N N 481 VAL CA C sing N N 482 VAL CA CB sing N N 483 VAL CA HA sing N N 484 VAL C O doub N N 485 VAL C OXT sing N N 486 VAL CB CG1 sing N N 487 VAL CB CG2 sing N N 488 VAL CB HB sing N N 489 VAL CG1 HG11 sing N N 490 VAL CG1 HG12 sing N N 491 VAL CG1 HG13 sing N N 492 VAL CG2 HG21 sing N N 493 VAL CG2 HG22 sing N N 494 VAL CG2 HG23 sing N N 495 VAL OXT HXT sing N N 496 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3QFQ 'double helix' 3QFQ 'a-form double helix' 3QFQ 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 D DC 2 1_555 E DG 26 1_555 -1.077 0.402 -0.595 16.286 -24.616 10.251 1 W_DC2:DG26_C W 2 ? C 26 ? ? 1 1 D DA 3 1_555 E DT 25 1_555 0.371 -0.008 0.343 11.962 -16.067 -2.379 2 W_DA3:DT25_C W 3 ? C 25 ? 20 1 1 D DG 4 1_555 E DC 24 1_555 0.080 -0.017 0.645 2.661 -23.177 2.301 3 W_DG4:DC24_C W 4 ? C 24 ? 19 1 1 D DA 5 1_555 E DT 23 1_555 0.321 -0.084 -0.108 -5.732 -8.421 -0.665 4 W_DA5:DT23_C W 5 ? C 23 ? 20 1 1 D DG 6 1_555 E DC 22 1_555 -0.919 0.111 -0.147 18.552 -6.107 12.807 5 W_DG6:DC22_C W 6 ? C 22 ? ? 1 1 D DG 7 1_555 E DC 21 1_555 -0.067 -0.264 0.800 -4.700 -36.640 2.668 6 W_DG7:DC21_C W 7 ? C 21 ? 19 1 1 D DC 8 1_555 E DG 20 1_555 0.611 0.082 1.173 -5.751 -30.510 3.306 7 W_DC8:DG20_C W 8 ? C 20 ? ? 1 1 D DT 9 1_555 E DA 19 1_555 0.158 0.225 1.482 -16.834 -15.138 12.398 8 W_DT9:DA19_C W 9 ? C 19 ? ? 1 1 D DT 10 1_555 E DA 18 1_555 -0.472 0.109 1.165 -8.550 -11.322 11.001 9 W_DT10:DA18_C W 10 ? C 18 ? ? ? 1 D DG 11 1_555 E DC 17 1_555 -0.464 -0.177 0.143 0.949 -13.966 3.626 10 W_DG11:DC17_C W 11 ? C 17 ? 19 1 1 D DG 12 1_555 E DC 16 1_555 -0.911 -0.310 0.211 -0.585 -12.044 1.074 11 W_DG12:DC16_C W 12 ? C 16 ? 19 1 1 D DG 13 1_555 E DC 15 1_555 -0.524 0.305 0.233 11.503 -5.591 8.380 12 W_DG13:DC15_C W 13 ? C 15 ? ? 1 1 D DG 14 1_555 E DC 14 1_555 0.384 0.318 0.791 18.744 -17.005 -5.252 13 W_DG14:DC14_C W 14 ? C 14 ? 19 1 1 D DC 15 1_555 E DG 13 1_555 0.033 0.347 0.073 5.846 -28.528 -2.754 14 W_DC15:DG13_C W 15 ? C 13 ? ? 1 1 D DT 16 1_555 E DA 12 1_555 -0.460 0.391 0.559 -9.191 -8.286 9.163 15 W_DT16:DA12_C W 16 ? C 12 ? ? ? 1 D DC 17 1_555 E DG 11 1_555 0.326 0.070 -0.620 16.938 -20.886 9.768 16 W_DC17:DG11_C W 17 ? C 11 ? 19 1 1 D DC 18 1_555 E DG 10 1_555 -0.778 0.061 0.403 -13.446 -11.900 4.253 17 W_DC18:DG10_C W 18 ? C 10 ? 19 1 1 D DT 19 1_555 E DA 9 1_555 0.695 0.108 0.789 -16.777 -13.271 -1.196 18 W_DT19:DA9_C W 19 ? C 9 ? 20 1 1 D DA 20 1_555 E DT 8 1_555 0.224 -0.041 -0.115 -2.399 2.893 6.658 19 W_DA20:DT8_C W 20 ? C 8 ? 20 1 1 D DG 21 1_555 E DC 7 1_555 -0.307 -0.220 0.147 -1.493 -16.426 -2.655 20 W_DG21:DC7_C W 21 ? C 7 ? 19 1 1 D DC 22 1_555 E DG 6 1_555 0.472 -0.020 0.066 -17.307 -7.148 -2.371 21 W_DC22:DG6_C W 22 ? C 6 ? 19 1 1 D DC 23 1_555 E DG 5 1_555 -0.172 0.475 -0.288 -15.672 -2.479 15.225 22 W_DC23:DG5_C W 23 ? C 5 ? ? 1 1 D DT 24 1_555 E DA 4 1_555 0.673 -0.126 0.188 0.709 4.557 -6.738 23 W_DT24:DA4_C W 24 ? C 4 ? 20 1 1 D DC 25 1_555 E DG 3 1_555 0.186 0.280 0.485 -2.893 -32.251 -10.196 24 W_DC25:DG3_C W 25 ? C 3 ? ? 1 1 D DC 26 1_555 E DG 2 1_555 0.378 0.186 -0.336 4.494 -5.381 6.395 25 W_DC26:DG2_C W 26 ? C 2 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 D DC 2 1_555 E DG 26 1_555 D DA 3 1_555 E DT 25 1_555 0.699 1.687 3.356 -5.479 6.346 42.657 1.634 -1.502 3.450 8.624 7.446 43.435 1 WW_DC2DA3:DT25DG26_CC W 2 ? C 26 ? W 3 ? C 25 ? 1 D DA 3 1_555 E DT 25 1_555 D DG 4 1_555 E DC 24 1_555 0.101 -0.095 3.526 -3.017 10.547 30.465 -2.175 -0.755 3.288 19.302 5.522 32.336 2 WW_DA3DG4:DC24DT25_CC W 3 ? C 25 ? W 4 ? C 24 ? 1 D DG 4 1_555 E DC 24 1_555 D DA 5 1_555 E DT 23 1_555 -0.423 -0.485 3.577 2.071 -5.071 41.145 -0.092 0.840 3.585 -7.177 -2.931 41.492 3 WW_DG4DA5:DT23DC24_CC W 4 ? C 24 ? W 5 ? C 23 ? 1 D DA 5 1_555 E DT 23 1_555 D DG 6 1_555 E DC 22 1_555 1.115 -0.431 2.881 -4.167 8.070 21.033 -3.456 -4.032 2.299 20.896 10.788 22.890 4 WW_DA5DG6:DC22DT23_CC W 5 ? C 23 ? W 6 ? C 22 ? 1 D DG 6 1_555 E DC 22 1_555 D DG 7 1_555 E DC 21 1_555 -1.463 -0.283 3.877 -11.746 -6.815 44.609 0.358 0.616 4.116 -8.741 15.065 46.529 5 WW_DG6DG7:DC21DC22_CC W 6 ? C 22 ? W 7 ? C 21 ? 1 D DG 7 1_555 E DC 21 1_555 D DC 8 1_555 E DG 20 1_555 0.587 -1.763 3.120 -0.588 -1.100 33.684 -2.868 -1.104 3.164 -1.898 1.015 33.707 6 WW_DG7DC8:DG20DC21_CC W 7 ? C 21 ? W 8 ? C 20 ? 1 D DC 8 1_555 E DG 20 1_555 D DT 9 1_555 E DA 19 1_555 0.378 -0.871 3.548 5.390 -5.950 34.700 -0.458 0.258 3.659 -9.815 -8.891 35.588 7 WW_DC8DT9:DA19DG20_CC W 8 ? C 20 ? W 9 ? C 19 ? 1 D DT 9 1_555 E DA 19 1_555 D DT 10 1_555 E DA 18 1_555 -0.361 -0.497 3.007 2.019 6.902 27.535 -2.433 1.150 2.770 14.196 -4.153 28.442 8 WW_DT9DT10:DA18DA19_CC W 9 ? C 19 ? W 10 ? C 18 ? 1 D DT 10 1_555 E DA 18 1_555 D DG 11 1_555 E DC 17 1_555 0.039 0.409 3.186 10.149 -4.178 39.085 1.043 1.044 3.045 -6.099 -14.818 40.539 9 WW_DT10DG11:DC17DA18_CC W 10 ? C 18 ? W 11 ? C 17 ? 1 D DG 11 1_555 E DC 17 1_555 D DG 12 1_555 E DC 16 1_555 -0.379 -0.280 3.277 -3.824 4.893 34.373 -1.210 0.052 3.230 8.196 6.406 34.913 10 WW_DG11DG12:DC16DC17_CC W 11 ? C 17 ? W 12 ? C 16 ? 1 D DG 12 1_555 E DC 16 1_555 D DG 13 1_555 E DC 15 1_555 0.594 -0.900 3.182 -6.841 5.398 26.403 -3.075 -2.759 2.712 11.428 14.484 27.779 11 WW_DG12DG13:DC15DC16_CC W 12 ? C 16 ? W 13 ? C 15 ? 1 D DG 13 1_555 E DC 15 1_555 D DG 14 1_555 E DC 14 1_555 -1.808 -0.469 3.117 -12.548 -5.571 39.357 -0.042 1.153 3.540 -7.983 17.980 41.593 12 WW_DG13DG14:DC14DC15_CC W 13 ? C 15 ? W 14 ? C 14 ? 1 D DG 14 1_555 E DC 14 1_555 D DC 15 1_555 E DG 13 1_555 0.473 -1.298 3.362 3.995 0.246 30.565 -2.491 -0.084 3.385 0.464 -7.537 30.820 13 WW_DG14DC15:DG13DC14_CC W 14 ? C 14 ? W 15 ? C 13 ? 1 D DC 15 1_555 E DG 13 1_555 D DT 16 1_555 E DA 12 1_555 0.909 -0.643 3.832 -1.026 -3.819 36.055 -0.403 -1.629 3.851 -6.147 1.651 36.264 14 WW_DC15DT16:DA12DG13_CC W 15 ? C 13 ? W 16 ? C 12 ? 1 D DT 16 1_555 E DA 12 1_555 D DC 17 1_555 E DG 11 1_555 -0.419 -0.273 2.514 6.826 -2.430 34.800 -0.177 1.444 2.405 -4.010 -11.262 35.523 15 WW_DT16DC17:DG11DA12_CC W 16 ? C 12 ? W 17 ? C 11 ? 1 D DC 17 1_555 E DG 11 1_555 D DC 18 1_555 E DG 10 1_555 0.253 -0.750 4.039 -2.330 2.217 35.860 -1.599 -0.816 3.964 3.592 3.775 36.000 16 WW_DC17DC18:DG10DG11_CC W 17 ? C 11 ? W 18 ? C 10 ? 1 D DC 18 1_555 E DG 10 1_555 D DT 19 1_555 E DA 9 1_555 -0.202 -0.409 3.400 -1.524 -0.687 39.479 -0.521 0.112 3.411 -1.016 2.256 39.513 17 WW_DC18DT19:DA9DG10_CC W 18 ? C 10 ? W 19 ? C 9 ? 1 D DT 19 1_555 E DA 9 1_555 D DA 20 1_555 E DT 8 1_555 1.557 0.755 2.980 8.222 2.213 35.433 0.909 -1.382 3.288 3.573 -13.274 36.410 18 WW_DT19DA20:DT8DA9_CC W 19 ? C 9 ? W 20 ? C 8 ? 1 D DA 20 1_555 E DT 8 1_555 D DG 21 1_555 E DC 7 1_555 -0.518 -0.327 3.397 -2.212 -3.236 31.157 0.034 0.522 3.440 -5.994 4.098 31.397 19 WW_DA20DG21:DC7DT8_CC W 20 ? C 8 ? W 21 ? C 7 ? 1 D DG 21 1_555 E DC 7 1_555 D DC 22 1_555 E DG 6 1_555 0.147 -1.157 3.727 2.742 2.341 38.748 -2.059 0.155 3.655 3.519 -4.122 38.909 20 WW_DG21DC22:DG6DC7_CC W 21 ? C 7 ? W 22 ? C 6 ? 1 D DC 22 1_555 E DG 6 1_555 D DC 23 1_555 E DG 5 1_555 1.980 -0.959 3.023 11.429 4.206 33.059 -2.219 -1.559 3.360 7.098 -19.289 35.172 21 WW_DC22DC23:DG5DG6_CC W 22 ? C 6 ? W 23 ? C 5 ? 1 D DC 23 1_555 E DG 5 1_555 D DT 24 1_555 E DA 4 1_555 -1.422 -0.379 3.075 -0.861 8.402 28.965 -2.325 2.570 2.893 16.365 1.676 30.146 22 WW_DC23DT24:DA4DG5_CC W 23 ? C 5 ? W 24 ? C 4 ? 1 D DT 24 1_555 E DA 4 1_555 D DC 25 1_555 E DG 3 1_555 0.062 -0.455 3.456 -0.916 -10.966 33.032 1.048 -0.255 3.426 -18.654 1.558 34.768 23 WW_DT24DC25:DG3DA4_CC W 24 ? C 4 ? W 25 ? C 3 ? 1 D DC 25 1_555 E DG 3 1_555 D DC 26 1_555 E DG 2 1_555 0.526 0.086 3.117 12.074 4.814 38.935 -0.393 0.542 3.127 6.989 -17.529 40.968 24 WW_DC25DC26:DG2DG3_CC W 25 ? C 3 ? W 26 ? C 2 ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2NTC _pdbx_initial_refinement_model.details 'PDB ENTRY 2NTC' #