HEADER PROTEIN BINDING 30-JAN-11 3QJN TITLE STRUCTURAL FLEXIBILITY OF SHANK PDZ DOMAIN IS IMPORTANT FOR ITS TITLE 2 BINDING TO DIFFERENT LIGANDS COMPND MOL_ID: 1; COMPND 2 MOLECULE: SH3 AND MULTIPLE ANKYRIN REPEAT DOMAINS PROTEIN 1; COMPND 3 CHAIN: A, B, C, D, E, F, G, H; COMPND 4 FRAGMENT: PDZ DOMAIN; COMPND 5 SYNONYM: SHANK1, GKAP/SAPAP-INTERACTING PROTEIN, SPANK-1, COMPND 6 SOMATOSTATIN RECEPTOR-INTERACTING PROTEIN, SSTR-INTERACTING PROTEIN, COMPND 7 SSTRIP, SYNAMON; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: BETA-PIX; COMPND 11 CHAIN: I, J, K, L, M, N, O, P; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: SHANK1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 OTHER_DETAILS: SYNTHETIC PEPTIDE KEYWDS PDZ DOMAIN, PROTEIN-PROTEIN INTERACTION, BETA-PIX, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR J.H.LEE,H.PARK,S.J.PARK,H.J.KIM,S.H.EOM REVDAT 3 20-MAR-24 3QJN 1 REMARK REVDAT 2 18-APR-12 3QJN 1 SHEET VERSN REVDAT 1 13-APR-11 3QJN 0 JRNL AUTH J.H.LEE,H.PARK,S.J.PARK,H.J.KIM,S.H.EOM JRNL TITL THE STRUCTURAL FLEXIBILITY OF THE SHANK1 PDZ DOMAIN IS JRNL TITL 2 IMPORTANT FOR ITS BINDING TO DIFFERENT LIGANDS JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 407 207 2011 JRNL REFN ISSN 0006-291X JRNL PMID 21376703 JRNL DOI 10.1016/J.BBRC.2011.02.141 REMARK 2 REMARK 2 RESOLUTION. 2.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.9.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.71 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 24304 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.272 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 1230 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 12 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.71 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.83 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2791 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2337 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2642 REMARK 3 BIN R VALUE (WORKING SET) : 0.2282 REMARK 3 BIN FREE R VALUE : 0.3306 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.34 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 149 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6416 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 129 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 71.03 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 69.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 18.35540 REMARK 3 B22 (A**2) : -18.69360 REMARK 3 B33 (A**2) : 0.33830 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.379 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.899 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.847 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 6496 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 8736 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2320 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 176 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 920 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 6496 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 824 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 7024 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.24 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.66 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 22.04 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|656 - A|757 } REMARK 3 ORIGIN FOR THE GROUP (A): 35.8438 94.4871 93.7995 REMARK 3 T TENSOR REMARK 3 T11: 0.1062 T22: -0.0270 REMARK 3 T33: -0.0801 T12: -0.0136 REMARK 3 T13: -0.0026 T23: 0.0083 REMARK 3 L TENSOR REMARK 3 L11: 4.7620 L22: 2.8450 REMARK 3 L33: 0.6084 L12: -0.7575 REMARK 3 L13: 0.0810 L23: 0.5484 REMARK 3 S TENSOR REMARK 3 S11: 0.0152 S12: 0.0524 S13: 0.2022 REMARK 3 S21: -0.2265 S22: 0.0073 S23: -0.0199 REMARK 3 S31: 0.0108 S32: -0.0047 S33: -0.0226 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3QJN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-FEB-11. REMARK 100 THE DEPOSITION ID IS D_1000063728. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24385 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM MES, 12% ETHANOL, 10% ETHYLENE REMARK 280 GLYCOL, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 44.68650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.45200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.57750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.45200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 44.68650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.57750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6, 7, 8 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, K REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, M REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, N REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 7 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, O REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 8 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 654 REMARK 465 SER A 655 REMARK 465 LYS A 682 REMARK 465 ALA A 683 REMARK 465 GLN A 684 REMARK 465 THR A 685 REMARK 465 PRO A 686 REMARK 465 HIS A 759 REMARK 465 PRO A 760 REMARK 465 ASP A 761 REMARK 465 MET A 762 REMARK 465 ASP A 763 REMARK 465 GLU A 764 REMARK 465 ALA A 765 REMARK 465 VAL A 766 REMARK 465 HIS A 767 REMARK 465 LYS A 768 REMARK 465 GLY B 654 REMARK 465 SER B 655 REMARK 465 LYS B 682 REMARK 465 ALA B 683 REMARK 465 GLN B 684 REMARK 465 THR B 685 REMARK 465 PRO B 686 REMARK 465 HIS B 759 REMARK 465 PRO B 760 REMARK 465 ASP B 761 REMARK 465 MET B 762 REMARK 465 ASP B 763 REMARK 465 GLU B 764 REMARK 465 ALA B 765 REMARK 465 VAL B 766 REMARK 465 HIS B 767 REMARK 465 LYS B 768 REMARK 465 GLY C 654 REMARK 465 SER C 655 REMARK 465 LYS C 682 REMARK 465 ALA C 683 REMARK 465 GLN C 684 REMARK 465 THR C 685 REMARK 465 PRO C 686 REMARK 465 HIS C 759 REMARK 465 PRO C 760 REMARK 465 ASP C 761 REMARK 465 MET C 762 REMARK 465 ASP C 763 REMARK 465 GLU C 764 REMARK 465 ALA C 765 REMARK 465 VAL C 766 REMARK 465 HIS C 767 REMARK 465 LYS C 768 REMARK 465 GLY D 654 REMARK 465 SER D 655 REMARK 465 LYS D 682 REMARK 465 ALA D 683 REMARK 465 GLN D 684 REMARK 465 THR D 685 REMARK 465 PRO D 686 REMARK 465 HIS D 759 REMARK 465 PRO D 760 REMARK 465 ASP D 761 REMARK 465 MET D 762 REMARK 465 ASP D 763 REMARK 465 GLU D 764 REMARK 465 ALA D 765 REMARK 465 VAL D 766 REMARK 465 HIS D 767 REMARK 465 LYS D 768 REMARK 465 GLY E 654 REMARK 465 SER E 655 REMARK 465 LYS E 682 REMARK 465 ALA E 683 REMARK 465 GLN E 684 REMARK 465 THR E 685 REMARK 465 PRO E 686 REMARK 465 HIS E 759 REMARK 465 PRO E 760 REMARK 465 ASP E 761 REMARK 465 MET E 762 REMARK 465 ASP E 763 REMARK 465 GLU E 764 REMARK 465 ALA E 765 REMARK 465 VAL E 766 REMARK 465 HIS E 767 REMARK 465 LYS E 768 REMARK 465 GLY F 654 REMARK 465 SER F 655 REMARK 465 LYS F 682 REMARK 465 ALA F 683 REMARK 465 GLN F 684 REMARK 465 THR F 685 REMARK 465 PRO F 686 REMARK 465 HIS F 759 REMARK 465 PRO F 760 REMARK 465 ASP F 761 REMARK 465 MET F 762 REMARK 465 ASP F 763 REMARK 465 GLU F 764 REMARK 465 ALA F 765 REMARK 465 VAL F 766 REMARK 465 HIS F 767 REMARK 465 LYS F 768 REMARK 465 GLY G 654 REMARK 465 SER G 655 REMARK 465 LYS G 682 REMARK 465 ALA G 683 REMARK 465 GLN G 684 REMARK 465 THR G 685 REMARK 465 PRO G 686 REMARK 465 HIS G 759 REMARK 465 PRO G 760 REMARK 465 ASP G 761 REMARK 465 MET G 762 REMARK 465 ASP G 763 REMARK 465 GLU G 764 REMARK 465 ALA G 765 REMARK 465 VAL G 766 REMARK 465 HIS G 767 REMARK 465 LYS G 768 REMARK 465 GLY H 654 REMARK 465 SER H 655 REMARK 465 LYS H 682 REMARK 465 ALA H 683 REMARK 465 GLN H 684 REMARK 465 THR H 685 REMARK 465 PRO H 686 REMARK 465 HIS H 759 REMARK 465 PRO H 760 REMARK 465 ASP H 761 REMARK 465 MET H 762 REMARK 465 ASP H 763 REMARK 465 GLU H 764 REMARK 465 ALA H 765 REMARK 465 VAL H 766 REMARK 465 HIS H 767 REMARK 465 LYS H 768 REMARK 465 ALA I 640 REMARK 465 TRP I 641 REMARK 465 ALA J 640 REMARK 465 TRP J 641 REMARK 465 ALA K 640 REMARK 465 TRP K 641 REMARK 465 ALA L 640 REMARK 465 TRP L 641 REMARK 465 ALA M 640 REMARK 465 TRP M 641 REMARK 465 ALA N 640 REMARK 465 TRP N 641 REMARK 465 ALA O 640 REMARK 465 TRP O 641 REMARK 465 ALA P 640 REMARK 465 TRP P 641 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 688 CG CD OE1 OE2 REMARK 470 GLU B 688 CG CD OE1 OE2 REMARK 470 GLU C 688 CG CD OE1 OE2 REMARK 470 GLU D 688 CG CD OE1 OE2 REMARK 470 GLU E 688 CG CD OE1 OE2 REMARK 470 GLU F 688 CG CD OE1 OE2 REMARK 470 GLU G 688 CG CD OE1 OE2 REMARK 470 GLU H 688 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG D 758 C - N - CA ANGL. DEV. = 15.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 671 31.88 -77.04 REMARK 500 GLU A 688 98.99 57.85 REMARK 500 GLU A 689 5.04 -164.66 REMARK 500 PHE A 690 122.10 -26.78 REMARK 500 GLU B 688 16.13 -152.55 REMARK 500 GLU B 707 -11.04 -46.04 REMARK 500 SER C 671 6.18 -69.03 REMARK 500 GLU C 707 -9.57 -50.15 REMARK 500 GLU D 707 -13.00 -49.78 REMARK 500 THR D 757 -159.43 -152.93 REMARK 500 GLU F 688 15.93 114.59 REMARK 500 GLU F 689 37.37 -87.58 REMARK 500 GLU G 688 36.61 -79.90 REMARK 500 PRO G 694 -37.72 -24.24 REMARK 500 GLU G 707 -33.17 -35.49 REMARK 500 SER H 671 3.75 -68.66 REMARK 500 GLU H 688 70.64 -168.40 REMARK 500 GLU H 689 22.27 -153.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3QJM RELATED DB: PDB DBREF 3QJN A 654 768 UNP Q9WV48 SHAN1_RAT 654 768 DBREF 3QJN B 654 768 UNP Q9WV48 SHAN1_RAT 654 768 DBREF 3QJN C 654 768 UNP Q9WV48 SHAN1_RAT 654 768 DBREF 3QJN D 654 768 UNP Q9WV48 SHAN1_RAT 654 768 DBREF 3QJN E 654 768 UNP Q9WV48 SHAN1_RAT 654 768 DBREF 3QJN F 654 768 UNP Q9WV48 SHAN1_RAT 654 768 DBREF 3QJN G 654 768 UNP Q9WV48 SHAN1_RAT 654 768 DBREF 3QJN H 654 768 UNP Q9WV48 SHAN1_RAT 654 768 DBREF 3QJN I 640 646 PDB 3QJN 3QJN 640 646 DBREF 3QJN J 640 646 PDB 3QJN 3QJN 640 646 DBREF 3QJN K 640 646 PDB 3QJN 3QJN 640 646 DBREF 3QJN L 640 646 PDB 3QJN 3QJN 640 646 DBREF 3QJN M 640 646 PDB 3QJN 3QJN 640 646 DBREF 3QJN N 640 646 PDB 3QJN 3QJN 640 646 DBREF 3QJN O 640 646 PDB 3QJN 3QJN 640 646 DBREF 3QJN P 640 646 PDB 3QJN 3QJN 640 646 SEQRES 1 A 115 GLY SER ASP TYR ILE ILE LYS GLU LYS THR VAL LEU LEU SEQRES 2 A 115 GLN LYS LYS ASP SER GLU GLY PHE GLY PHE VAL LEU ARG SEQRES 3 A 115 GLY ALA LYS ALA GLN THR PRO ILE GLU GLU PHE THR PRO SEQRES 4 A 115 THR PRO ALA PHE PRO ALA LEU GLN TYR LEU GLU SER VAL SEQRES 5 A 115 ASP GLU GLY GLY VAL ALA TRP ARG ALA GLY LEU ARG MET SEQRES 6 A 115 GLY ASP PHE LEU ILE GLU VAL ASN GLY GLN ASN VAL VAL SEQRES 7 A 115 LYS VAL GLY HIS ARG GLN VAL VAL ASN MET ILE ARG GLN SEQRES 8 A 115 GLY GLY ASN THR LEU MET VAL LYS VAL VAL MET VAL THR SEQRES 9 A 115 ARG HIS PRO ASP MET ASP GLU ALA VAL HIS LYS SEQRES 1 B 115 GLY SER ASP TYR ILE ILE LYS GLU LYS THR VAL LEU LEU SEQRES 2 B 115 GLN LYS LYS ASP SER GLU GLY PHE GLY PHE VAL LEU ARG SEQRES 3 B 115 GLY ALA LYS ALA GLN THR PRO ILE GLU GLU PHE THR PRO SEQRES 4 B 115 THR PRO ALA PHE PRO ALA LEU GLN TYR LEU GLU SER VAL SEQRES 5 B 115 ASP GLU GLY GLY VAL ALA TRP ARG ALA GLY LEU ARG MET SEQRES 6 B 115 GLY ASP PHE LEU ILE GLU VAL ASN GLY GLN ASN VAL VAL SEQRES 7 B 115 LYS VAL GLY HIS ARG GLN VAL VAL ASN MET ILE ARG GLN SEQRES 8 B 115 GLY GLY ASN THR LEU MET VAL LYS VAL VAL MET VAL THR SEQRES 9 B 115 ARG HIS PRO ASP MET ASP GLU ALA VAL HIS LYS SEQRES 1 C 115 GLY SER ASP TYR ILE ILE LYS GLU LYS THR VAL LEU LEU SEQRES 2 C 115 GLN LYS LYS ASP SER GLU GLY PHE GLY PHE VAL LEU ARG SEQRES 3 C 115 GLY ALA LYS ALA GLN THR PRO ILE GLU GLU PHE THR PRO SEQRES 4 C 115 THR PRO ALA PHE PRO ALA LEU GLN TYR LEU GLU SER VAL SEQRES 5 C 115 ASP GLU GLY GLY VAL ALA TRP ARG ALA GLY LEU ARG MET SEQRES 6 C 115 GLY ASP PHE LEU ILE GLU VAL ASN GLY GLN ASN VAL VAL SEQRES 7 C 115 LYS VAL GLY HIS ARG GLN VAL VAL ASN MET ILE ARG GLN SEQRES 8 C 115 GLY GLY ASN THR LEU MET VAL LYS VAL VAL MET VAL THR SEQRES 9 C 115 ARG HIS PRO ASP MET ASP GLU ALA VAL HIS LYS SEQRES 1 D 115 GLY SER ASP TYR ILE ILE LYS GLU LYS THR VAL LEU LEU SEQRES 2 D 115 GLN LYS LYS ASP SER GLU GLY PHE GLY PHE VAL LEU ARG SEQRES 3 D 115 GLY ALA LYS ALA GLN THR PRO ILE GLU GLU PHE THR PRO SEQRES 4 D 115 THR PRO ALA PHE PRO ALA LEU GLN TYR LEU GLU SER VAL SEQRES 5 D 115 ASP GLU GLY GLY VAL ALA TRP ARG ALA GLY LEU ARG MET SEQRES 6 D 115 GLY ASP PHE LEU ILE GLU VAL ASN GLY GLN ASN VAL VAL SEQRES 7 D 115 LYS VAL GLY HIS ARG GLN VAL VAL ASN MET ILE ARG GLN SEQRES 8 D 115 GLY GLY ASN THR LEU MET VAL LYS VAL VAL MET VAL THR SEQRES 9 D 115 ARG HIS PRO ASP MET ASP GLU ALA VAL HIS LYS SEQRES 1 E 115 GLY SER ASP TYR ILE ILE LYS GLU LYS THR VAL LEU LEU SEQRES 2 E 115 GLN LYS LYS ASP SER GLU GLY PHE GLY PHE VAL LEU ARG SEQRES 3 E 115 GLY ALA LYS ALA GLN THR PRO ILE GLU GLU PHE THR PRO SEQRES 4 E 115 THR PRO ALA PHE PRO ALA LEU GLN TYR LEU GLU SER VAL SEQRES 5 E 115 ASP GLU GLY GLY VAL ALA TRP ARG ALA GLY LEU ARG MET SEQRES 6 E 115 GLY ASP PHE LEU ILE GLU VAL ASN GLY GLN ASN VAL VAL SEQRES 7 E 115 LYS VAL GLY HIS ARG GLN VAL VAL ASN MET ILE ARG GLN SEQRES 8 E 115 GLY GLY ASN THR LEU MET VAL LYS VAL VAL MET VAL THR SEQRES 9 E 115 ARG HIS PRO ASP MET ASP GLU ALA VAL HIS LYS SEQRES 1 F 115 GLY SER ASP TYR ILE ILE LYS GLU LYS THR VAL LEU LEU SEQRES 2 F 115 GLN LYS LYS ASP SER GLU GLY PHE GLY PHE VAL LEU ARG SEQRES 3 F 115 GLY ALA LYS ALA GLN THR PRO ILE GLU GLU PHE THR PRO SEQRES 4 F 115 THR PRO ALA PHE PRO ALA LEU GLN TYR LEU GLU SER VAL SEQRES 5 F 115 ASP GLU GLY GLY VAL ALA TRP ARG ALA GLY LEU ARG MET SEQRES 6 F 115 GLY ASP PHE LEU ILE GLU VAL ASN GLY GLN ASN VAL VAL SEQRES 7 F 115 LYS VAL GLY HIS ARG GLN VAL VAL ASN MET ILE ARG GLN SEQRES 8 F 115 GLY GLY ASN THR LEU MET VAL LYS VAL VAL MET VAL THR SEQRES 9 F 115 ARG HIS PRO ASP MET ASP GLU ALA VAL HIS LYS SEQRES 1 G 115 GLY SER ASP TYR ILE ILE LYS GLU LYS THR VAL LEU LEU SEQRES 2 G 115 GLN LYS LYS ASP SER GLU GLY PHE GLY PHE VAL LEU ARG SEQRES 3 G 115 GLY ALA LYS ALA GLN THR PRO ILE GLU GLU PHE THR PRO SEQRES 4 G 115 THR PRO ALA PHE PRO ALA LEU GLN TYR LEU GLU SER VAL SEQRES 5 G 115 ASP GLU GLY GLY VAL ALA TRP ARG ALA GLY LEU ARG MET SEQRES 6 G 115 GLY ASP PHE LEU ILE GLU VAL ASN GLY GLN ASN VAL VAL SEQRES 7 G 115 LYS VAL GLY HIS ARG GLN VAL VAL ASN MET ILE ARG GLN SEQRES 8 G 115 GLY GLY ASN THR LEU MET VAL LYS VAL VAL MET VAL THR SEQRES 9 G 115 ARG HIS PRO ASP MET ASP GLU ALA VAL HIS LYS SEQRES 1 H 115 GLY SER ASP TYR ILE ILE LYS GLU LYS THR VAL LEU LEU SEQRES 2 H 115 GLN LYS LYS ASP SER GLU GLY PHE GLY PHE VAL LEU ARG SEQRES 3 H 115 GLY ALA LYS ALA GLN THR PRO ILE GLU GLU PHE THR PRO SEQRES 4 H 115 THR PRO ALA PHE PRO ALA LEU GLN TYR LEU GLU SER VAL SEQRES 5 H 115 ASP GLU GLY GLY VAL ALA TRP ARG ALA GLY LEU ARG MET SEQRES 6 H 115 GLY ASP PHE LEU ILE GLU VAL ASN GLY GLN ASN VAL VAL SEQRES 7 H 115 LYS VAL GLY HIS ARG GLN VAL VAL ASN MET ILE ARG GLN SEQRES 8 H 115 GLY GLY ASN THR LEU MET VAL LYS VAL VAL MET VAL THR SEQRES 9 H 115 ARG HIS PRO ASP MET ASP GLU ALA VAL HIS LYS SEQRES 1 I 7 ALA TRP ASP GLU THR ASN LEU SEQRES 1 J 7 ALA TRP ASP GLU THR ASN LEU SEQRES 1 K 7 ALA TRP ASP GLU THR ASN LEU SEQRES 1 L 7 ALA TRP ASP GLU THR ASN LEU SEQRES 1 M 7 ALA TRP ASP GLU THR ASN LEU SEQRES 1 N 7 ALA TRP ASP GLU THR ASN LEU SEQRES 1 O 7 ALA TRP ASP GLU THR ASN LEU SEQRES 1 P 7 ALA TRP ASP GLU THR ASN LEU FORMUL 17 HOH *129(H2 O) HELIX 1 1 GLY A 709 ALA A 714 1 6 HELIX 2 2 GLY A 734 GLN A 744 1 11 HELIX 3 3 GLY B 709 ALA B 714 1 6 HELIX 4 4 GLY B 734 GLY B 745 1 12 HELIX 5 5 GLY C 709 ALA C 714 1 6 HELIX 6 6 GLY C 734 GLY C 745 1 12 HELIX 7 7 GLY D 709 ALA D 714 1 6 HELIX 8 8 GLY D 734 GLY D 745 1 12 HELIX 9 9 GLY E 709 ALA E 714 1 6 HELIX 10 10 GLY E 734 GLY E 745 1 12 HELIX 11 11 GLY F 709 GLY F 715 1 7 HELIX 12 12 GLY F 734 GLY F 745 1 12 HELIX 13 13 GLY G 709 ALA G 714 1 6 HELIX 14 14 GLY G 734 GLY G 745 1 12 HELIX 15 15 GLY H 709 ALA H 714 1 6 HELIX 16 16 GLY H 734 GLY H 745 1 12 SHEET 1 A 8 GLN A 728 ASN A 729 0 SHEET 2 A 8 PHE A 721 VAL A 725 -1 N VAL A 725 O GLN A 728 SHEET 3 A 8 THR A 748 ARG A 758 -1 O LYS A 752 N ILE A 723 SHEET 4 A 8 TYR A 657 GLN A 667 -1 N LEU A 666 O LEU A 749 SHEET 5 A 8 TYR B 657 GLN B 667 -1 O TYR B 657 N ILE A 659 SHEET 6 A 8 THR B 748 THR B 757 -1 O LEU B 749 N LEU B 666 SHEET 7 A 8 PHE B 721 VAL B 725 -1 N ILE B 723 O LYS B 752 SHEET 8 A 8 GLN B 728 ASN B 729 -1 O GLN B 728 N VAL B 725 SHEET 1 B 3 TYR A 701 VAL A 705 0 SHEET 2 B 3 PHE A 676 ARG A 679 -1 N ARG A 679 O TYR A 701 SHEET 3 B 3 GLU I 643 ASN I 645 -1 O THR I 644 N LEU A 678 SHEET 1 C 3 TYR B 701 VAL B 705 0 SHEET 2 C 3 PHE B 676 ARG B 679 -1 N ARG B 679 O TYR B 701 SHEET 3 C 3 GLU J 643 ASN J 645 -1 O THR J 644 N LEU B 678 SHEET 1 D 8 GLN C 728 ASN C 729 0 SHEET 2 D 8 ASP C 720 VAL C 725 -1 N VAL C 725 O GLN C 728 SHEET 3 D 8 THR C 748 ARG C 758 -1 O LYS C 752 N ILE C 723 SHEET 4 D 8 TYR C 657 GLN C 667 -1 N LEU C 666 O LEU C 749 SHEET 5 D 8 TYR D 657 GLN D 667 -1 O ILE D 659 N TYR C 657 SHEET 6 D 8 THR D 748 THR D 757 -1 O LEU D 749 N LEU D 666 SHEET 7 D 8 PHE D 721 VAL D 725 -1 N ILE D 723 O LYS D 752 SHEET 8 D 8 GLN D 728 ASN D 729 -1 O GLN D 728 N VAL D 725 SHEET 1 E 3 TYR C 701 VAL C 705 0 SHEET 2 E 3 PHE C 676 ARG C 679 -1 N ARG C 679 O TYR C 701 SHEET 3 E 3 GLU K 643 ASN K 645 -1 O THR K 644 N LEU C 678 SHEET 1 F 3 GLN D 700 VAL D 705 0 SHEET 2 F 3 PHE D 676 GLY D 680 -1 N ARG D 679 O TYR D 701 SHEET 3 F 3 GLU L 643 ASN L 645 -1 O THR L 644 N LEU D 678 SHEET 1 G 8 GLN E 728 ASN E 729 0 SHEET 2 G 8 PHE E 721 VAL E 725 -1 N VAL E 725 O GLN E 728 SHEET 3 G 8 THR E 748 ARG E 758 -1 O LYS E 752 N ILE E 723 SHEET 4 G 8 TYR E 657 GLN E 667 -1 N LEU E 666 O LEU E 749 SHEET 5 G 8 TYR F 657 GLN F 667 -1 O ILE F 659 N TYR E 657 SHEET 6 G 8 THR F 748 THR F 757 -1 O LEU F 749 N LEU F 666 SHEET 7 G 8 PHE F 721 VAL F 725 -1 N ILE F 723 O LYS F 752 SHEET 8 G 8 GLN F 728 ASN F 729 -1 O GLN F 728 N VAL F 725 SHEET 1 H 3 TYR E 701 VAL E 705 0 SHEET 2 H 3 PHE E 676 ARG E 679 -1 N ARG E 679 O TYR E 701 SHEET 3 H 3 GLU M 643 ASN M 645 -1 O THR M 644 N LEU E 678 SHEET 1 I 3 TYR F 701 VAL F 705 0 SHEET 2 I 3 PHE F 676 ARG F 679 -1 N VAL F 677 O GLU F 703 SHEET 3 I 3 GLU N 643 ASN N 645 -1 O THR N 644 N LEU F 678 SHEET 1 J 8 GLN G 728 ASN G 729 0 SHEET 2 J 8 PHE G 721 VAL G 725 -1 N VAL G 725 O GLN G 728 SHEET 3 J 8 THR G 748 ARG G 758 -1 O LYS G 752 N ILE G 723 SHEET 4 J 8 TYR G 657 GLN G 667 -1 N LEU G 666 O LEU G 749 SHEET 5 J 8 TYR H 657 GLN H 667 -1 O ILE H 659 N TYR G 657 SHEET 6 J 8 THR H 748 THR H 757 -1 O LEU H 749 N LEU H 666 SHEET 7 J 8 PHE H 721 VAL H 725 -1 N ILE H 723 O LYS H 752 SHEET 8 J 8 GLN H 728 ASN H 729 -1 O GLN H 728 N VAL H 725 SHEET 1 K 3 TYR G 701 VAL G 705 0 SHEET 2 K 3 PHE G 676 ARG G 679 -1 N ARG G 679 O TYR G 701 SHEET 3 K 3 GLU O 643 ASN O 645 -1 O THR O 644 N LEU G 678 SHEET 1 L 3 GLN H 700 VAL H 705 0 SHEET 2 L 3 PHE H 676 GLY H 680 -1 N ARG H 679 O TYR H 701 SHEET 3 L 3 GLU P 643 ASN P 645 -1 O THR P 644 N LEU H 678 CRYST1 89.373 95.155 108.904 90.00 90.00 90.00 P 21 21 21 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011189 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010509 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009182 0.00000