HEADER OXYGEN BINDING 30-JAN-11 3QJO TITLE REFINED STRUCTURE OF THE FUNCTIONAL UNIT (KLH1-H) OF KEYHOLE LIMPET TITLE 2 HEMOCYANIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMOCYANIN 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: COLLAR SUBUNIT (UNP RESIDUES 2912-3406) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MEGATHURA CRENULATA; SOURCE 3 ORGANISM_COMMON: GIANT KEYHOLE LIMPET; SOURCE 4 ORGANISM_TAXID: 55429 KEYWDS PF00264, OXYGEN BINDING, HEMOLYMPH EXPDTA X-RAY DIFFRACTION AUTHOR E.JAENICKE,K.BUCHLER,H.DECKER,J.MARKL,G.F.SCHRODER REVDAT 3 01-NOV-23 3QJO 1 REMARK LINK REVDAT 2 08-NOV-17 3QJO 1 REMARK REVDAT 1 25-MAY-11 3QJO 0 JRNL AUTH E.JAENICKE,K.BUCHLER,H.DECKER,J.MARKL,G.F.SCHRODER JRNL TITL THE REFINED STRUCTURE OF FUNCTIONAL UNIT H OF KEYHOLE LIMPET JRNL TITL 2 HEMOCYANIN (KLH1-H) REVEALS DISULFIDE BRIDGES. JRNL REF IUBMB LIFE V. 63 183 2011 JRNL REFN ISSN 1521-6543 JRNL PMID 21445849 JRNL DOI 10.1002/IUB.435 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH E.JAENICKE,K.BUCHLER,J.MARKL,H.DECKER,T.R.BARENDS REMARK 1 TITL CUPREDOXIN-LIKE DOMAINS IN HAEMOCYANINS. REMARK 1 REF BIOCHEM.J. V. 426 373 2010 REMARK 1 REFN ISSN 0264-6021 REMARK 1 PMID 20025608 REMARK 1 DOI 10.1042/BJ20091501 REMARK 2 REMARK 2 RESOLUTION. 4.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 22294 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.271 REMARK 3 FREE R VALUE : 0.293 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1872 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 3 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 4.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 4.14 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3965 REMARK 3 BIN FREE R VALUE : 0.4384 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 174 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7990 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.003 REMARK 3 BOND ANGLES (DEGREES) : 0.855 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: DEN REFINEMENT REMARK 4 REMARK 4 3QJO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-FEB-11. REMARK 100 THE DEPOSITION ID IS D_1000063729. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-SEP-06 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 4 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22294 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.18000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.84700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.460 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER, RESOLVE, DM REMARK 200 STARTING MODEL: 1JS8, 2CBP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 78.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 9% PEG 1000, 50MM PHOSPHATE/CITRATE REMARK 280 BUFFER, PH 4.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y,-Z REMARK 290 16555 X,-Y,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z,-X,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y REMARK 290 20555 -Z+1/2,X,-Y REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z,-X REMARK 290 23555 Y,-Z,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 125.51000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 125.51000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 125.51000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 125.51000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 125.51000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 125.51000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 125.51000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 125.51000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 125.51000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 125.51000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 125.51000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 125.51000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 125.51000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 125.51000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 125.51000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 125.51000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 125.51000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 125.51000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 125.51000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 125.51000 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 125.51000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 125.51000 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 125.51000 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 125.51000 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 125.51000 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 125.51000 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 125.51000 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 125.51000 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 125.51000 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 125.51000 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 125.51000 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 125.51000 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 125.51000 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 125.51000 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 125.51000 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 125.51000 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A2956 -76.82 -77.14 REMARK 500 LEU A2961 -92.46 -145.93 REMARK 500 CYS A2962 -85.07 34.34 REMARK 500 GLU A2964 90.66 -63.12 REMARK 500 ASP A2967 29.56 42.20 REMARK 500 LYS A2969 -153.37 59.59 REMARK 500 TYR A2970 114.12 138.22 REMARK 500 HIS A3001 -41.26 -131.60 REMARK 500 ALA A3021 -31.70 -38.77 REMARK 500 ASP A3022 62.23 -69.21 REMARK 500 ASN A3025 14.29 57.22 REMARK 500 ARG A3035 -38.10 72.18 REMARK 500 ASN A3038 -159.51 58.09 REMARK 500 GLN A3039 124.99 68.57 REMARK 500 ASP A3044 76.82 -112.26 REMARK 500 GLU A3047 -71.18 -44.86 REMARK 500 ILE A3049 -129.60 -143.80 REMARK 500 PHE A3050 86.98 67.40 REMARK 500 GLN A3052 -51.40 -152.39 REMARK 500 THR A3053 127.49 175.66 REMARK 500 PHE A3055 74.80 58.03 REMARK 500 SER A3060 -166.15 83.23 REMARK 500 ILE A3061 -82.89 -12.75 REMARK 500 PHE A3062 -48.07 -28.39 REMARK 500 ASN A3073 158.94 63.07 REMARK 500 LYS A3097 -72.26 -47.96 REMARK 500 TYR A3098 54.28 -103.28 REMARK 500 GLU A3104 2.67 -63.55 REMARK 500 TYR A3105 -23.63 -146.81 REMARK 500 VAL A3134 26.22 46.21 REMARK 500 HIS A3138 -82.22 -152.82 REMARK 500 ALA A3139 -124.76 -63.26 REMARK 500 SER A3141 -64.05 -129.12 REMARK 500 CYS A3142 -109.62 -115.23 REMARK 500 ALA A3143 79.69 -67.45 REMARK 500 HIS A3148 61.95 -69.54 REMARK 500 VAL A3149 125.14 -171.89 REMARK 500 GLU A3157 91.52 -67.92 REMARK 500 SER A3158 15.09 161.39 REMARK 500 VAL A3159 -167.34 -76.31 REMARK 500 ASN A3160 1.42 -66.38 REMARK 500 ASN A3161 10.52 59.54 REMARK 500 ASN A3168 30.89 -76.21 REMARK 500 HIS A3178 9.83 -61.52 REMARK 500 ASN A3181 75.91 48.38 REMARK 500 TYR A3182 141.55 -179.71 REMARK 500 VAL A3215 56.37 -110.95 REMARK 500 THR A3233 -77.46 -47.81 REMARK 500 ASP A3234 -26.79 -155.64 REMARK 500 SER A3235 3.37 173.14 REMARK 500 REMARK 500 THIS ENTRY HAS 214 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A3407 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A2956 NE2 REMARK 620 2 HIS A2975 NE2 117.0 REMARK 620 3 HIS A2984 NE2 151.1 79.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A3408 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A3085 NE2 REMARK 620 2 HIS A3089 NE2 68.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B3407 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B2956 NE2 REMARK 620 2 HIS B2975 NE2 116.2 REMARK 620 3 HIS B2984 NE2 150.0 81.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B3408 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B3085 NE2 REMARK 620 2 HIS B3089 NE2 68.6 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 3407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 3408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU B 3407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU B 3408 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3L6W RELATED DB: PDB REMARK 900 BACKBONE TRACE ONLY. DBREF 3QJO A 2916 3406 UNP Q53IP9 Q53IP9_MEGCR 2916 3406 DBREF 3QJO B 2916 3406 UNP Q53IP9 Q53IP9_MEGCR 2916 3406 SEQRES 1 A 491 ILE LEU VAL ARG LYS ASN ILE HIS SER LEU SER HIS HIS SEQRES 2 A 491 GLU ALA GLU GLU LEU ARG ASP ALA LEU TYR LYS LEU GLN SEQRES 3 A 491 ASN ASP GLU SER HIS GLY GLY TYR GLU HIS ILE ALA GLY SEQRES 4 A 491 PHE HIS GLY TYR PRO ASN LEU CYS PRO GLU LYS GLY ASP SEQRES 5 A 491 GLU LYS TYR PRO CYS CYS VAL HIS GLY MET SER ILE PHE SEQRES 6 A 491 PRO HIS TRP HIS ARG LEU HIS THR ILE GLN PHE GLU ARG SEQRES 7 A 491 ALA LEU LYS LYS HIS GLY SER HIS LEU GLY ILE PRO TYR SEQRES 8 A 491 TRP ASP TRP THR GLN THR ILE SER SER LEU PRO THR PHE SEQRES 9 A 491 PHE ALA ASP SER GLY ASN ASN ASN PRO PHE PHE LYS TYR SEQRES 10 A 491 HIS ILE ARG SER ILE ASN GLN ASP THR VAL ARG ASP VAL SEQRES 11 A 491 ASN GLU ALA ILE PHE GLN GLN THR LYS PHE GLY GLU PHE SEQRES 12 A 491 SER SER ILE PHE TYR LEU ALA LEU GLN ALA LEU GLU GLU SEQRES 13 A 491 ASP ASN TYR CYS ASP PHE GLU VAL GLN TYR GLU ILE LEU SEQRES 14 A 491 HIS ASN GLU VAL HIS ALA LEU ILE GLY GLY ALA GLU LYS SEQRES 15 A 491 TYR SER MET SER THR LEU GLU TYR SER ALA PHE ASP PRO SEQRES 16 A 491 TYR PHE MET ILE HIS HIS ALA SER LEU ASP LYS ILE TRP SEQRES 17 A 491 ILE ILE TRP GLN GLU LEU GLN LYS ARG ARG VAL LYS PRO SEQRES 18 A 491 ALA HIS ALA GLY SER CYS ALA GLY ASP ILE MET HIS VAL SEQRES 19 A 491 PRO LEU HIS PRO PHE ASN TYR GLU SER VAL ASN ASN ASP SEQRES 20 A 491 ASP PHE THR ARG GLU ASN SER LEU PRO ASN ALA VAL VAL SEQRES 21 A 491 ASP SER HIS ARG PHE ASN TYR LYS TYR ASP ASN LEU ASN SEQRES 22 A 491 LEU HIS GLY HIS ASN ILE GLU GLU LEU GLU GLU VAL LEU SEQRES 23 A 491 ARG SER LEU ARG LEU LYS SER ARG VAL PHE ALA GLY PHE SEQRES 24 A 491 VAL LEU SER GLY ILE ARG THR THR ALA VAL VAL LYS VAL SEQRES 25 A 491 TYR ILE LYS SER GLY THR ASP SER ASP ASP GLU TYR ALA SEQRES 26 A 491 GLY SER PHE VAL ILE LEU GLY GLY ALA LYS GLU MET PRO SEQRES 27 A 491 TRP ALA TYR GLU ARG LEU TYR ARG PHE ASP ILE THR GLU SEQRES 28 A 491 THR VAL HIS ASN LEU ASN LEU THR ASP ASP HIS VAL LYS SEQRES 29 A 491 PHE ARG PHE ASP LEU LYS LYS TYR ASP HIS THR GLU LEU SEQRES 30 A 491 ASP ALA SER VAL LEU PRO ALA PRO ILE ILE VAL ARG ARG SEQRES 31 A 491 PRO ASN ASN ALA VAL PHE ASP ILE ILE GLU ILE PRO ILE SEQRES 32 A 491 GLY LYS ASP VAL ASN LEU PRO PRO LYS VAL VAL VAL LYS SEQRES 33 A 491 ARG GLY THR LYS ILE MET PHE MET SER VAL ASP GLU ALA SEQRES 34 A 491 VAL THR THR PRO MET LEU ASN LEU GLY SER TYR THR ALA SEQRES 35 A 491 MET PHE LYS CYS LYS VAL PRO PRO PHE SER PHE HIS ALA SEQRES 36 A 491 PHE GLU LEU GLY LYS MET TYR SER VAL GLU SER GLY ASP SEQRES 37 A 491 TYR PHE MET THR ALA SER THR THR GLU LEU CYS ASN ASP SEQRES 38 A 491 ASN ASN LEU ARG ILE HIS VAL HIS VAL ASP SEQRES 1 B 491 ILE LEU VAL ARG LYS ASN ILE HIS SER LEU SER HIS HIS SEQRES 2 B 491 GLU ALA GLU GLU LEU ARG ASP ALA LEU TYR LYS LEU GLN SEQRES 3 B 491 ASN ASP GLU SER HIS GLY GLY TYR GLU HIS ILE ALA GLY SEQRES 4 B 491 PHE HIS GLY TYR PRO ASN LEU CYS PRO GLU LYS GLY ASP SEQRES 5 B 491 GLU LYS TYR PRO CYS CYS VAL HIS GLY MET SER ILE PHE SEQRES 6 B 491 PRO HIS TRP HIS ARG LEU HIS THR ILE GLN PHE GLU ARG SEQRES 7 B 491 ALA LEU LYS LYS HIS GLY SER HIS LEU GLY ILE PRO TYR SEQRES 8 B 491 TRP ASP TRP THR GLN THR ILE SER SER LEU PRO THR PHE SEQRES 9 B 491 PHE ALA ASP SER GLY ASN ASN ASN PRO PHE PHE LYS TYR SEQRES 10 B 491 HIS ILE ARG SER ILE ASN GLN ASP THR VAL ARG ASP VAL SEQRES 11 B 491 ASN GLU ALA ILE PHE GLN GLN THR LYS PHE GLY GLU PHE SEQRES 12 B 491 SER SER ILE PHE TYR LEU ALA LEU GLN ALA LEU GLU GLU SEQRES 13 B 491 ASP ASN TYR CYS ASP PHE GLU VAL GLN TYR GLU ILE LEU SEQRES 14 B 491 HIS ASN GLU VAL HIS ALA LEU ILE GLY GLY ALA GLU LYS SEQRES 15 B 491 TYR SER MET SER THR LEU GLU TYR SER ALA PHE ASP PRO SEQRES 16 B 491 TYR PHE MET ILE HIS HIS ALA SER LEU ASP LYS ILE TRP SEQRES 17 B 491 ILE ILE TRP GLN GLU LEU GLN LYS ARG ARG VAL LYS PRO SEQRES 18 B 491 ALA HIS ALA GLY SER CYS ALA GLY ASP ILE MET HIS VAL SEQRES 19 B 491 PRO LEU HIS PRO PHE ASN TYR GLU SER VAL ASN ASN ASP SEQRES 20 B 491 ASP PHE THR ARG GLU ASN SER LEU PRO ASN ALA VAL VAL SEQRES 21 B 491 ASP SER HIS ARG PHE ASN TYR LYS TYR ASP ASN LEU ASN SEQRES 22 B 491 LEU HIS GLY HIS ASN ILE GLU GLU LEU GLU GLU VAL LEU SEQRES 23 B 491 ARG SER LEU ARG LEU LYS SER ARG VAL PHE ALA GLY PHE SEQRES 24 B 491 VAL LEU SER GLY ILE ARG THR THR ALA VAL VAL LYS VAL SEQRES 25 B 491 TYR ILE LYS SER GLY THR ASP SER ASP ASP GLU TYR ALA SEQRES 26 B 491 GLY SER PHE VAL ILE LEU GLY GLY ALA LYS GLU MET PRO SEQRES 27 B 491 TRP ALA TYR GLU ARG LEU TYR ARG PHE ASP ILE THR GLU SEQRES 28 B 491 THR VAL HIS ASN LEU ASN LEU THR ASP ASP HIS VAL LYS SEQRES 29 B 491 PHE ARG PHE ASP LEU LYS LYS TYR ASP HIS THR GLU LEU SEQRES 30 B 491 ASP ALA SER VAL LEU PRO ALA PRO ILE ILE VAL ARG ARG SEQRES 31 B 491 PRO ASN ASN ALA VAL PHE ASP ILE ILE GLU ILE PRO ILE SEQRES 32 B 491 GLY LYS ASP VAL ASN LEU PRO PRO LYS VAL VAL VAL LYS SEQRES 33 B 491 ARG GLY THR LYS ILE MET PHE MET SER VAL ASP GLU ALA SEQRES 34 B 491 VAL THR THR PRO MET LEU ASN LEU GLY SER TYR THR ALA SEQRES 35 B 491 MET PHE LYS CYS LYS VAL PRO PRO PHE SER PHE HIS ALA SEQRES 36 B 491 PHE GLU LEU GLY LYS MET TYR SER VAL GLU SER GLY ASP SEQRES 37 B 491 TYR PHE MET THR ALA SER THR THR GLU LEU CYS ASN ASP SEQRES 38 B 491 ASN ASN LEU ARG ILE HIS VAL HIS VAL ASP HET CU A3407 1 HET CU A3408 1 HET CU B3407 1 HET CU B3408 1 HETNAM CU COPPER (II) ION FORMUL 3 CU 4(CU 2+) HELIX 1 1 SER A 2926 ASN A 2942 1 17 HELIX 2 2 GLY A 2948 GLY A 2957 1 10 HELIX 3 3 ILE A 2979 HIS A 2998 1 20 HELIX 4 4 PRO A 3017 ASP A 3022 1 6 HELIX 5 5 SER A 3060 GLU A 3071 1 12 HELIX 6 6 TYR A 3074 GLY A 3094 1 21 HELIX 7 7 THR A 3102 ALA A 3107 1 6 HELIX 8 8 ASP A 3109 ARG A 3132 1 24 HELIX 9 9 ASP A 3162 ASN A 3168 1 7 HELIX 10 10 LEU A 3170 VAL A 3175 1 6 HELIX 11 11 ASP A 3176 PHE A 3180 5 5 HELIX 12 12 ASN A 3193 ARG A 3205 1 13 HELIX 13 13 ILE A 3264 ASN A 3272 1 9 HELIX 14 14 TYR A 3355 LYS A 3360 1 6 HELIX 15 15 THR A 3391 ASN A 3395 5 5 HELIX 16 16 SER B 2926 ASN B 2942 1 17 HELIX 17 17 GLY B 2948 GLY B 2957 1 10 HELIX 18 18 ILE B 2979 HIS B 2998 1 20 HELIX 19 19 PRO B 3017 ASP B 3022 1 6 HELIX 20 20 SER B 3060 GLU B 3071 1 12 HELIX 21 21 TYR B 3074 GLY B 3094 1 21 HELIX 22 22 THR B 3102 ALA B 3107 1 6 HELIX 23 23 ASP B 3109 ARG B 3132 1 24 HELIX 24 24 ASP B 3162 ASN B 3168 1 7 HELIX 25 25 LEU B 3170 VAL B 3175 1 6 HELIX 26 26 ASP B 3176 PHE B 3180 5 5 HELIX 27 27 ASN B 3193 ARG B 3205 1 13 HELIX 28 28 ILE B 3264 ASN B 3272 1 9 HELIX 29 29 TYR B 3355 LYS B 3360 1 6 HELIX 30 30 THR B 3391 ASN B 3395 5 5 SHEET 1 A 2 VAL A2918 ARG A2919 0 SHEET 2 A 2 LYS A3183 TYR A3184 1 O LYS A3183 N ARG A2919 SHEET 1 B 2 ARG A3209 PHE A3211 0 SHEET 2 B 2 VAL A3303 ARG A3305 -1 O VAL A3303 N PHE A3211 SHEET 1 C 3 TYR A3239 ILE A3245 0 SHEET 2 C 3 ALA A3223 TYR A3228 -1 N ALA A3223 O ILE A3245 SHEET 3 C 3 LEU A3284 TYR A3287 -1 O LYS A3286 N VAL A3224 SHEET 1 D 2 ILE A3314 GLU A3315 0 SHEET 2 D 2 LYS A3335 ILE A3336 1 O LYS A3335 N GLU A3315 SHEET 1 E 2 VAL B2918 ARG B2919 0 SHEET 2 E 2 LYS B3183 TYR B3184 1 O LYS B3183 N ARG B2919 SHEET 1 F 2 ARG B3209 PHE B3211 0 SHEET 2 F 2 VAL B3303 ARG B3305 -1 O VAL B3303 N PHE B3211 SHEET 1 G 3 TYR B3239 ILE B3245 0 SHEET 2 G 3 ALA B3223 TYR B3228 -1 N ALA B3223 O ILE B3245 SHEET 3 G 3 LEU B3284 TYR B3287 -1 O LYS B3286 N VAL B3224 SHEET 1 H 2 ILE B3314 GLU B3315 0 SHEET 2 H 2 LYS B3335 ILE B3336 1 O LYS B3335 N GLU B3315 SSBOND 1 CYS A 2962 CYS A 2972 1555 1555 2.03 SSBOND 2 CYS A 3075 CYS A 3142 1555 1555 2.03 SSBOND 3 CYS A 3361 CYS A 3394 1555 1555 1.99 SSBOND 4 CYS B 2962 CYS B 2972 1555 1555 2.02 SSBOND 5 CYS B 3075 CYS B 3142 1555 1555 2.02 SSBOND 6 CYS B 3361 CYS B 3394 1555 1555 2.00 LINK NE2 HIS A2956 CU CU A3407 1555 1555 2.19 LINK NE2 HIS A2975 CU CU A3407 1555 1555 2.01 LINK NE2 HIS A2984 CU CU A3407 1555 1555 2.27 LINK NE2 HIS A3085 CU CU A3408 1555 1555 2.27 LINK NE2 HIS A3089 CU CU A3408 1555 1555 2.48 LINK NE2 HIS B2956 CU CU B3407 1555 1555 2.23 LINK NE2 HIS B2975 CU CU B3407 1555 1555 1.99 LINK NE2 HIS B2984 CU CU B3407 1555 1555 2.24 LINK NE2 HIS B3085 CU CU B3408 1555 1555 2.25 LINK NE2 HIS B3089 CU CU B3408 1555 1555 2.45 CISPEP 1 TYR A 2958 PRO A 2959 0 -0.09 CISPEP 2 HIS A 3152 PRO A 3153 0 -0.16 CISPEP 3 LEU A 3297 PRO A 3298 0 -0.24 CISPEP 4 TYR B 2958 PRO B 2959 0 -0.07 CISPEP 5 HIS B 3152 PRO B 3153 0 0.02 CISPEP 6 LEU B 3297 PRO B 3298 0 -0.19 SITE 1 AC1 5 HIS A2956 CYS A2973 HIS A2975 HIS A2984 SITE 2 AC1 5 CU A3408 SITE 1 AC2 6 HIS A2975 HIS A2984 HIS A3085 HIS A3089 SITE 2 AC2 6 HIS A3116 CU A3407 SITE 1 AC3 5 HIS B2956 CYS B2973 HIS B2975 HIS B2984 SITE 2 AC3 5 CU B3408 SITE 1 AC4 6 HIS B2975 HIS B2984 HIS B3085 HIS B3089 SITE 2 AC4 6 HIS B3116 CU B3407 CRYST1 251.020 251.020 251.020 90.00 90.00 90.00 I 21 3 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.003984 0.000000 0.000000 0.00000 SCALE2 0.000000 0.003984 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003984 0.00000