data_3QM9 # _entry.id 3QM9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3QM9 pdb_00003qm9 10.2210/pdb3qm9/pdb RCSB RCSB063822 ? ? WWPDB D_1000063822 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2NRL 'BLACKFIN TUNA METAQUO-MYOGLOBIN' unspecified PDB 2NRM 'S-NITROSYLATED BLACKFIN TUNA MYOGLOBIN' unspecified PDB 2NX0 'FERROUS NITROSYL BLACKFIN TUNA MYOGLOBIN' unspecified PDB 3QM5 . unspecified PDB 3QM6 . unspecified PDB 3QM7 . unspecified PDB 3QM8 . unspecified PDB 3QMA . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3QM9 _pdbx_database_status.recvd_initial_deposition_date 2011-02-03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'de Serrano, V.S.' 1 'Rodriguez, M.M.' 2 'Schreiter, E.R.' 3 # _citation.id primary _citation.title 'High Resolution Structures of Blackfin Tuna Myoglobin' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'de Serrano, V.S.' 1 ? primary 'Rodriguez, M.M.' 2 ? primary 'Schreiter, E.R.' 3 ? # _cell.entry_id 3QM9 _cell.length_a 34.008 _cell.length_b 51.894 _cell.length_c 38.644 _cell.angle_alpha 90.00 _cell.angle_beta 103.95 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3QM9 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat Myoglobin 15479.013 1 ? ? ? ? 2 non-polymer syn 'PROTOPORPHYRIN IX CONTAINING FE' 616.487 1 ? ? ? ? 3 non-polymer syn 'AZIDE ION' 42.020 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 6 ? ? ? ? 5 water nat water 18.015 168 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(ACE)ADFDAVLKCWGPVEADYTTIGGLVLTRLFKEHPETQKLFPKFAGIAQADIAGNAAVSAHGATVLKKLGELLKAKG SHAAILKPLANSHATKHKIPINNFKLISEVLVKVMQEKAGLDAGGQTALRNVMGIIIADLEANYKELGFS ; _entity_poly.pdbx_seq_one_letter_code_can ;XADFDAVLKCWGPVEADYTTIGGLVLTRLFKEHPETQKLFPKFAGIAQADIAGNAAVSAHGATVLKKLGELLKAKGSHAA ILKPLANSHATKHKIPINNFKLISEVLVKVMQEKAGLDAGGQTALRNVMGIIIADLEANYKELGFS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 ALA n 1 3 ASP n 1 4 PHE n 1 5 ASP n 1 6 ALA n 1 7 VAL n 1 8 LEU n 1 9 LYS n 1 10 CYS n 1 11 TRP n 1 12 GLY n 1 13 PRO n 1 14 VAL n 1 15 GLU n 1 16 ALA n 1 17 ASP n 1 18 TYR n 1 19 THR n 1 20 THR n 1 21 ILE n 1 22 GLY n 1 23 GLY n 1 24 LEU n 1 25 VAL n 1 26 LEU n 1 27 THR n 1 28 ARG n 1 29 LEU n 1 30 PHE n 1 31 LYS n 1 32 GLU n 1 33 HIS n 1 34 PRO n 1 35 GLU n 1 36 THR n 1 37 GLN n 1 38 LYS n 1 39 LEU n 1 40 PHE n 1 41 PRO n 1 42 LYS n 1 43 PHE n 1 44 ALA n 1 45 GLY n 1 46 ILE n 1 47 ALA n 1 48 GLN n 1 49 ALA n 1 50 ASP n 1 51 ILE n 1 52 ALA n 1 53 GLY n 1 54 ASN n 1 55 ALA n 1 56 ALA n 1 57 VAL n 1 58 SER n 1 59 ALA n 1 60 HIS n 1 61 GLY n 1 62 ALA n 1 63 THR n 1 64 VAL n 1 65 LEU n 1 66 LYS n 1 67 LYS n 1 68 LEU n 1 69 GLY n 1 70 GLU n 1 71 LEU n 1 72 LEU n 1 73 LYS n 1 74 ALA n 1 75 LYS n 1 76 GLY n 1 77 SER n 1 78 HIS n 1 79 ALA n 1 80 ALA n 1 81 ILE n 1 82 LEU n 1 83 LYS n 1 84 PRO n 1 85 LEU n 1 86 ALA n 1 87 ASN n 1 88 SER n 1 89 HIS n 1 90 ALA n 1 91 THR n 1 92 LYS n 1 93 HIS n 1 94 LYS n 1 95 ILE n 1 96 PRO n 1 97 ILE n 1 98 ASN n 1 99 ASN n 1 100 PHE n 1 101 LYS n 1 102 LEU n 1 103 ILE n 1 104 SER n 1 105 GLU n 1 106 VAL n 1 107 LEU n 1 108 VAL n 1 109 LYS n 1 110 VAL n 1 111 MET n 1 112 GLN n 1 113 GLU n 1 114 LYS n 1 115 ALA n 1 116 GLY n 1 117 LEU n 1 118 ASP n 1 119 ALA n 1 120 GLY n 1 121 GLY n 1 122 GLN n 1 123 THR n 1 124 ALA n 1 125 LEU n 1 126 ARG n 1 127 ASN n 1 128 VAL n 1 129 MET n 1 130 GLY n 1 131 ILE n 1 132 ILE n 1 133 ILE n 1 134 ALA n 1 135 ASP n 1 136 LEU n 1 137 GLU n 1 138 ALA n 1 139 ASN n 1 140 TYR n 1 141 LYS n 1 142 GLU n 1 143 LEU n 1 144 GLY n 1 145 PHE n 1 146 SER n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name 'blackfin tuna' _entity_src_nat.pdbx_organism_scientific 'Thunnus atlanticus' _entity_src_nat.pdbx_ncbi_taxonomy_id 48168 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3QM9 _struct_ref.pdbx_db_accession 3QM9 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3QM9 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 146 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 3QM9 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 146 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 146 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 AZI non-polymer . 'AZIDE ION' ? 'N3 -1' 42.020 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HEM non-polymer . 'PROTOPORPHYRIN IX CONTAINING FE' HEME 'C34 H32 Fe N4 O4' 616.487 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3QM9 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.14 _exptl_crystal.density_percent_sol 42.47 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;0.2 M potassium/sodium tartrate, 0.1 M sodium citrate, 2.0 M ammonium sulfate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2006-06-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.92 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 31-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 31-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.92 # _reflns.entry_id 3QM9 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 17.27 _reflns.d_resolution_high 0.91 _reflns.number_obs 82720 _reflns.number_all 88244 _reflns.percent_possible_obs 93.74 _reflns.pdbx_Rmerge_I_obs 0.056 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 31.21 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 0.91 _reflns_shell.d_res_low 0.934 _reflns_shell.percent_possible_all 87.34 _reflns_shell.Rmerge_I_obs 0.301 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5.9 _reflns_shell.pdbx_redundancy 5.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3QM9 _refine.ls_number_reflns_obs 82720 _refine.ls_number_reflns_all 88244 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 17.27 _refine.ls_d_res_high 0.91 _refine.ls_percent_reflns_obs 93.74 _refine.ls_R_factor_obs 0.12068 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.12002 _refine.ls_R_factor_R_free 0.13324 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 4356 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.980 _refine.correlation_coeff_Fo_to_Fc_free 0.974 _refine.B_iso_mean 7.658 _refine.aniso_B[1][1] 4.67 _refine.aniso_B[2][2] -1.96 _refine.aniso_B[3][3] -2.70 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 4.66 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB entry 2NRL' _refine.pdbx_method_to_determine_struct 'RIGID BODY refinement' _refine.pdbx_isotropic_thermal_model Anisotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.004 _refine.pdbx_overall_ESU_R_Free 0.004 _refine.overall_SU_ML 0.008 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 0.318 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1091 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 70 _refine_hist.number_atoms_solvent 168 _refine_hist.number_atoms_total 1329 _refine_hist.d_res_high 0.91 _refine_hist.d_res_low 17.27 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.030 0.022 ? 1544 'X-RAY DIFFRACTION' ? r_bond_other_d 0.007 0.020 ? 1090 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.430 2.170 ? 2134 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.152 3.000 ? 2714 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.996 5.000 ? 212 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 32.146 25.690 ? 58 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.671 15.000 ? 301 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.109 15.000 ? 5 'X-RAY DIFFRACTION' ? r_chiral_restr 0.128 0.200 ? 225 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.013 0.020 ? 1703 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.003 0.020 ? 261 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.278 1.500 ? 875 'X-RAY DIFFRACTION' ? r_mcbond_other 0.961 1.500 ? 354 'X-RAY DIFFRACTION' ? r_mcangle_it 3.324 2.000 ? 1435 'X-RAY DIFFRACTION' ? r_scbond_it 4.823 3.000 ? 669 'X-RAY DIFFRACTION' ? r_scangle_it 6.236 4.500 ? 669 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 2.250 3.000 ? 2631 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 0.91 _refine_ls_shell.d_res_low 0.934 _refine_ls_shell.number_reflns_R_work 5631 _refine_ls_shell.R_factor_R_work 0.293 _refine_ls_shell.percent_reflns_obs 87.34 _refine_ls_shell.R_factor_R_free 0.305 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 309 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3QM9 _struct.title 'Blackfin tuna azido-myoglobin, atomic resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3QM9 _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text 'myoglobin, oxygen storage, heme, iron, TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 2 ? LYS A 9 ? ALA A 2 LYS A 9 1 ? 8 HELX_P HELX_P2 2 TRP A 11 ? ALA A 16 ? TRP A 11 ALA A 16 1 ? 6 HELX_P HELX_P3 3 ASP A 17 ? HIS A 33 ? ASP A 17 HIS A 33 1 ? 17 HELX_P HELX_P4 4 HIS A 33 ? LYS A 38 ? HIS A 33 LYS A 38 1 ? 6 HELX_P HELX_P5 5 ALA A 47 ? ILE A 51 ? ALA A 47 ILE A 51 5 ? 5 HELX_P HELX_P6 6 ASN A 54 ? ALA A 74 ? ASN A 54 ALA A 74 1 ? 21 HELX_P HELX_P7 7 HIS A 78 ? LYS A 92 ? HIS A 78 LYS A 92 1 ? 15 HELX_P HELX_P8 8 ILE A 97 ? ALA A 115 ? ILE A 97 ALA A 115 1 ? 19 HELX_P HELX_P9 9 ASP A 118 ? LEU A 143 ? ASP A 118 LEU A 143 1 ? 26 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ACE 1 C ? ? ? 1_555 A ALA 2 N ? ? A ACE 1 A ALA 2 1_555 ? ? ? ? ? ? ? 1.333 ? ? metalc1 metalc ? ? A HIS 89 NE2 ? ? ? 1_555 B HEM . FE A ? A HIS 89 A HEM 201 1_555 ? ? ? ? ? ? ? 1.963 ? ? metalc2 metalc ? ? A HIS 89 NE2 ? ? ? 1_555 B HEM . FE B ? A HIS 89 A HEM 201 1_555 ? ? ? ? ? ? ? 2.288 ? ? metalc3 metalc ? ? B HEM . FE A ? ? 1_555 C AZI . N1 A ? A HEM 201 A AZI 202 1_555 ? ? ? ? ? ? ? 2.104 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A HEM 201 ? 22 'BINDING SITE FOR RESIDUE HEM A 201' AC2 Software A AZI 202 ? 6 'BINDING SITE FOR RESIDUE AZI A 202' AC3 Software A EDO 203 ? 6 'BINDING SITE FOR RESIDUE EDO A 203' AC4 Software A EDO 204 ? 3 'BINDING SITE FOR RESIDUE EDO A 204' AC5 Software A EDO 205 ? 4 'BINDING SITE FOR RESIDUE EDO A 205' AC6 Software A EDO 206 ? 4 'BINDING SITE FOR RESIDUE EDO A 206' AC7 Software A EDO 207 ? 8 'BINDING SITE FOR RESIDUE EDO A 207' AC8 Software A EDO 208 ? 6 'BINDING SITE FOR RESIDUE EDO A 208' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 22 LEU A 39 ? LEU A 39 . ? 1_555 ? 2 AC1 22 PHE A 40 ? PHE A 40 . ? 1_555 ? 3 AC1 22 LYS A 42 ? LYS A 42 . ? 1_555 ? 4 AC1 22 HIS A 60 ? HIS A 60 . ? 1_555 ? 5 AC1 22 THR A 63 ? THR A 63 . ? 1_555 ? 6 AC1 22 VAL A 64 ? VAL A 64 . ? 1_555 ? 7 AC1 22 LEU A 68 ? LEU A 68 . ? 1_555 ? 8 AC1 22 LEU A 85 ? LEU A 85 . ? 1_555 ? 9 AC1 22 SER A 88 ? SER A 88 . ? 1_555 ? 10 AC1 22 HIS A 89 ? HIS A 89 . ? 1_555 ? 11 AC1 22 HIS A 93 ? HIS A 93 . ? 1_555 ? 12 AC1 22 ILE A 95 ? ILE A 95 . ? 1_555 ? 13 AC1 22 ASN A 99 ? ASN A 99 . ? 1_555 ? 14 AC1 22 PHE A 100 ? PHE A 100 . ? 1_555 ? 15 AC1 22 AZI C . ? AZI A 202 . ? 1_555 ? 16 AC1 22 HOH J . ? HOH A 324 . ? 1_555 ? 17 AC1 22 HOH J . ? HOH A 339 . ? 1_555 ? 18 AC1 22 HOH J . ? HOH A 343 . ? 1_555 ? 19 AC1 22 HOH J . ? HOH A 375 . ? 1_555 ? 20 AC1 22 HOH J . ? HOH A 381 . ? 1_555 ? 21 AC1 22 HOH J . ? HOH A 393 . ? 1_555 ? 22 AC1 22 HOH J . ? HOH A 437 . ? 1_555 ? 23 AC2 6 PHE A 40 ? PHE A 40 . ? 1_555 ? 24 AC2 6 HIS A 60 ? HIS A 60 . ? 1_555 ? 25 AC2 6 VAL A 64 ? VAL A 64 . ? 1_555 ? 26 AC2 6 ILE A 103 ? ILE A 103 . ? 1_555 ? 27 AC2 6 HEM B . ? HEM A 201 . ? 1_555 ? 28 AC2 6 HOH J . ? HOH A 339 . ? 1_555 ? 29 AC3 6 LYS A 83 ? LYS A 83 . ? 1_555 ? 30 AC3 6 ASN A 87 ? ASN A 87 . ? 1_555 ? 31 AC3 6 ASN A 139 ? ASN A 139 . ? 1_555 ? 32 AC3 6 LEU A 143 ? LEU A 143 . ? 1_555 ? 33 AC3 6 EDO E . ? EDO A 204 . ? 1_555 ? 34 AC3 6 HOH J . ? HOH A 444 . ? 1_555 ? 35 AC4 3 GLU A 142 ? GLU A 142 . ? 1_555 ? 36 AC4 3 EDO D . ? EDO A 203 . ? 1_555 ? 37 AC4 3 HOH J . ? HOH A 443 . ? 1_555 ? 38 AC5 4 ALA A 52 ? ALA A 52 . ? 1_555 ? 39 AC5 4 GLY A 53 ? GLY A 53 . ? 1_555 ? 40 AC5 4 SER A 58 ? SER A 58 . ? 1_555 ? 41 AC5 4 HOH J . ? HOH A 448 . ? 1_555 ? 42 AC6 4 ALA A 47 ? ALA A 47 . ? 1_555 ? 43 AC6 4 GLN A 48 ? GLN A 48 . ? 1_555 ? 44 AC6 4 HOH J . ? HOH A 311 . ? 1_555 ? 45 AC6 4 HOH J . ? HOH A 400 . ? 1_555 ? 46 AC7 8 ALA A 90 ? ALA A 90 . ? 1_555 ? 47 AC7 8 LYS A 94 ? LYS A 94 . ? 1_555 ? 48 AC7 8 ILE A 95 ? ILE A 95 . ? 1_555 ? 49 AC7 8 TYR A 140 ? TYR A 140 . ? 1_555 ? 50 AC7 8 PHE A 145 ? PHE A 145 . ? 1_555 ? 51 AC7 8 HOH J . ? HOH A 391 . ? 1_555 ? 52 AC7 8 HOH J . ? HOH A 432 . ? 1_555 ? 53 AC7 8 HOH J . ? HOH A 449 . ? 1_556 ? 54 AC8 6 GLY A 53 ? GLY A 53 . ? 1_555 ? 55 AC8 6 ASN A 54 ? ASN A 54 . ? 1_555 ? 56 AC8 6 ALA A 55 ? ALA A 55 . ? 1_555 ? 57 AC8 6 ALA A 56 ? ALA A 56 . ? 1_555 ? 58 AC8 6 HOH J . ? HOH A 453 . ? 1_555 ? 59 AC8 6 HOH J . ? HOH A 467 . ? 1_455 ? # _database_PDB_matrix.entry_id 3QM9 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3QM9 _atom_sites.fract_transf_matrix[1][1] 0.029405 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.007304 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019270 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.026664 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 1 1 ACE ACE A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 ASP 3 3 3 ASP ASP A . n A 1 4 PHE 4 4 4 PHE PHE A . n A 1 5 ASP 5 5 5 ASP ASP A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 CYS 10 10 10 CYS CYS A . n A 1 11 TRP 11 11 11 TRP TRP A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 TYR 18 18 18 TYR TYR A . n A 1 19 THR 19 19 19 THR THR A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 PHE 30 30 30 PHE PHE A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 HIS 33 33 33 HIS HIS A . n A 1 34 PRO 34 34 34 PRO PRO A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 GLN 37 37 37 GLN GLN A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 PHE 40 40 40 PHE PHE A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 PHE 43 43 43 PHE PHE A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 GLN 48 48 48 GLN GLN A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 ILE 51 51 51 ILE ILE A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 ASN 54 54 54 ASN ASN A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 SER 58 58 58 SER SER A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 HIS 60 60 60 HIS HIS A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 THR 63 63 63 THR THR A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 LEU 65 65 65 LEU LEU A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 LYS 67 67 67 LYS LYS A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 GLU 70 70 70 GLU GLU A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 ALA 74 74 74 ALA ALA A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 HIS 78 78 78 HIS HIS A . n A 1 79 ALA 79 79 79 ALA ALA A . n A 1 80 ALA 80 80 80 ALA ALA A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 PRO 84 84 84 PRO PRO A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 ASN 87 87 87 ASN ASN A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 HIS 89 89 89 HIS HIS A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 LYS 92 92 92 LYS LYS A . n A 1 93 HIS 93 93 93 HIS HIS A . n A 1 94 LYS 94 94 94 LYS LYS A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 PRO 96 96 96 PRO PRO A . n A 1 97 ILE 97 97 97 ILE ILE A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 PHE 100 100 100 PHE PHE A . n A 1 101 LYS 101 101 101 LYS LYS A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 ILE 103 103 103 ILE ILE A . n A 1 104 SER 104 104 104 SER SER A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 VAL 106 106 106 VAL VAL A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 VAL 108 108 108 VAL VAL A . n A 1 109 LYS 109 109 109 LYS LYS A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 MET 111 111 111 MET MET A . n A 1 112 GLN 112 112 112 GLN GLN A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 LYS 114 114 114 LYS LYS A . n A 1 115 ALA 115 115 115 ALA ALA A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 LEU 117 117 117 LEU LEU A . n A 1 118 ASP 118 118 118 ASP ASP A . n A 1 119 ALA 119 119 119 ALA ALA A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 GLN 122 122 122 GLN GLN A . n A 1 123 THR 123 123 123 THR THR A . n A 1 124 ALA 124 124 124 ALA ALA A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 ARG 126 126 126 ARG ARG A . n A 1 127 ASN 127 127 127 ASN ASN A . n A 1 128 VAL 128 128 128 VAL VAL A . n A 1 129 MET 129 129 129 MET MET A . n A 1 130 GLY 130 130 130 GLY GLY A . n A 1 131 ILE 131 131 131 ILE ILE A . n A 1 132 ILE 132 132 132 ILE ILE A . n A 1 133 ILE 133 133 133 ILE ILE A . n A 1 134 ALA 134 134 134 ALA ALA A . n A 1 135 ASP 135 135 135 ASP ASP A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 GLU 137 137 137 GLU GLU A . n A 1 138 ALA 138 138 138 ALA ALA A . n A 1 139 ASN 139 139 139 ASN ASN A . n A 1 140 TYR 140 140 140 TYR TYR A . n A 1 141 LYS 141 141 141 LYS LYS A . n A 1 142 GLU 142 142 142 GLU GLU A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 GLY 144 144 144 GLY GLY A . n A 1 145 PHE 145 145 145 PHE PHE A . n A 1 146 SER 146 146 146 SER SER A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM 1 201 148 HEM HEM A . C 3 AZI 1 202 1 AZI AZI A . D 4 EDO 1 203 2 EDO EDO A . E 4 EDO 1 204 3 EDO EDO A . F 4 EDO 1 205 4 EDO EDO A . G 4 EDO 1 206 5 EDO EDO A . H 4 EDO 1 207 6 EDO EDO A . I 4 EDO 1 208 7 EDO EDO A . J 5 HOH 1 301 155 HOH HOH A . J 5 HOH 2 302 156 HOH HOH A . J 5 HOH 3 303 157 HOH HOH A . J 5 HOH 4 304 158 HOH HOH A . J 5 HOH 5 305 162 HOH HOH A . J 5 HOH 6 306 164 HOH HOH A . J 5 HOH 7 307 165 HOH HOH A . J 5 HOH 8 308 166 HOH HOH A . J 5 HOH 9 309 167 HOH HOH A . J 5 HOH 10 310 168 HOH HOH A . J 5 HOH 11 311 169 HOH HOH A . J 5 HOH 12 312 170 HOH HOH A . J 5 HOH 13 313 171 HOH HOH A . J 5 HOH 14 314 173 HOH HOH A . J 5 HOH 15 315 174 HOH HOH A . J 5 HOH 16 316 175 HOH HOH A . J 5 HOH 17 317 176 HOH HOH A . J 5 HOH 18 318 177 HOH HOH A . J 5 HOH 19 319 181 HOH HOH A . J 5 HOH 20 320 182 HOH HOH A . J 5 HOH 21 321 183 HOH HOH A . J 5 HOH 22 322 184 HOH HOH A . J 5 HOH 23 323 185 HOH HOH A . J 5 HOH 24 324 188 HOH HOH A . J 5 HOH 25 325 189 HOH HOH A . J 5 HOH 26 326 190 HOH HOH A . J 5 HOH 27 327 191 HOH HOH A . J 5 HOH 28 328 192 HOH HOH A . J 5 HOH 29 329 193 HOH HOH A . J 5 HOH 30 330 194 HOH HOH A . J 5 HOH 31 331 196 HOH HOH A . J 5 HOH 32 332 198 HOH HOH A . J 5 HOH 33 333 200 HOH HOH A . J 5 HOH 34 334 201 HOH HOH A . J 5 HOH 35 335 205 HOH HOH A . J 5 HOH 36 336 206 HOH HOH A . J 5 HOH 37 337 207 HOH HOH A . J 5 HOH 38 338 208 HOH HOH A . J 5 HOH 39 339 209 HOH HOH A . J 5 HOH 40 340 210 HOH HOH A . J 5 HOH 41 341 211 HOH HOH A . J 5 HOH 42 342 212 HOH HOH A . J 5 HOH 43 343 213 HOH HOH A . J 5 HOH 44 344 214 HOH HOH A . J 5 HOH 45 345 215 HOH HOH A . J 5 HOH 46 346 2 HOH HOH A . J 5 HOH 47 347 3 HOH HOH A . J 5 HOH 48 348 5 HOH HOH A . J 5 HOH 49 349 6 HOH HOH A . J 5 HOH 50 350 220 HOH HOH A . J 5 HOH 51 351 221 HOH HOH A . J 5 HOH 52 352 222 HOH HOH A . J 5 HOH 53 353 223 HOH HOH A . J 5 HOH 54 354 224 HOH HOH A . J 5 HOH 55 355 225 HOH HOH A . J 5 HOH 56 356 226 HOH HOH A . J 5 HOH 57 357 227 HOH HOH A . J 5 HOH 58 358 228 HOH HOH A . J 5 HOH 59 359 229 HOH HOH A . J 5 HOH 60 360 230 HOH HOH A . J 5 HOH 61 361 231 HOH HOH A . J 5 HOH 62 362 232 HOH HOH A . J 5 HOH 63 363 233 HOH HOH A . J 5 HOH 64 364 234 HOH HOH A . J 5 HOH 65 365 235 HOH HOH A . J 5 HOH 66 366 236 HOH HOH A . J 5 HOH 67 367 237 HOH HOH A . J 5 HOH 68 368 238 HOH HOH A . J 5 HOH 69 369 239 HOH HOH A . J 5 HOH 70 370 240 HOH HOH A . J 5 HOH 71 371 241 HOH HOH A . J 5 HOH 72 372 242 HOH HOH A . J 5 HOH 73 373 243 HOH HOH A . J 5 HOH 74 374 244 HOH HOH A . J 5 HOH 75 375 245 HOH HOH A . J 5 HOH 76 376 7 HOH HOH A . J 5 HOH 77 377 8 HOH HOH A . J 5 HOH 78 378 9 HOH HOH A . J 5 HOH 79 379 10 HOH HOH A . J 5 HOH 80 380 11 HOH HOH A . J 5 HOH 81 381 12 HOH HOH A . J 5 HOH 82 382 13 HOH HOH A . J 5 HOH 83 383 14 HOH HOH A . J 5 HOH 84 384 16 HOH HOH A . J 5 HOH 85 385 17 HOH HOH A . J 5 HOH 86 386 18 HOH HOH A . J 5 HOH 87 387 19 HOH HOH A . J 5 HOH 88 388 20 HOH HOH A . J 5 HOH 89 389 21 HOH HOH A . J 5 HOH 90 390 22 HOH HOH A . J 5 HOH 91 391 23 HOH HOH A . J 5 HOH 92 392 24 HOH HOH A . J 5 HOH 93 393 25 HOH HOH A . J 5 HOH 94 394 26 HOH HOH A . J 5 HOH 95 395 27 HOH HOH A . J 5 HOH 96 396 31 HOH HOH A . J 5 HOH 97 397 32 HOH HOH A . J 5 HOH 98 398 34 HOH HOH A . J 5 HOH 99 399 35 HOH HOH A . J 5 HOH 100 400 36 HOH HOH A . J 5 HOH 101 401 37 HOH HOH A . J 5 HOH 102 402 38 HOH HOH A . J 5 HOH 103 403 39 HOH HOH A . J 5 HOH 104 404 40 HOH HOH A . J 5 HOH 105 405 41 HOH HOH A . J 5 HOH 106 406 43 HOH HOH A . J 5 HOH 107 407 45 HOH HOH A . J 5 HOH 108 408 46 HOH HOH A . J 5 HOH 109 409 47 HOH HOH A . J 5 HOH 110 410 49 HOH HOH A . J 5 HOH 111 411 50 HOH HOH A . J 5 HOH 112 412 52 HOH HOH A . J 5 HOH 113 413 54 HOH HOH A . J 5 HOH 114 414 55 HOH HOH A . J 5 HOH 115 415 56 HOH HOH A . J 5 HOH 116 416 57 HOH HOH A . J 5 HOH 117 417 60 HOH HOH A . J 5 HOH 118 418 61 HOH HOH A . J 5 HOH 119 419 64 HOH HOH A . J 5 HOH 120 420 65 HOH HOH A . J 5 HOH 121 421 67 HOH HOH A . J 5 HOH 122 422 69 HOH HOH A . J 5 HOH 123 423 70 HOH HOH A . J 5 HOH 124 424 71 HOH HOH A . J 5 HOH 125 425 72 HOH HOH A . J 5 HOH 126 426 74 HOH HOH A . J 5 HOH 127 427 77 HOH HOH A . J 5 HOH 128 428 89 HOH HOH A . J 5 HOH 129 429 90 HOH HOH A . J 5 HOH 130 430 93 HOH HOH A . J 5 HOH 131 431 97 HOH HOH A . J 5 HOH 132 432 98 HOH HOH A . J 5 HOH 133 433 105 HOH HOH A . J 5 HOH 134 434 111 HOH HOH A . J 5 HOH 135 435 113 HOH HOH A . J 5 HOH 136 436 114 HOH HOH A . J 5 HOH 137 437 119 HOH HOH A . J 5 HOH 138 438 123 HOH HOH A . J 5 HOH 139 439 124 HOH HOH A . J 5 HOH 140 440 125 HOH HOH A . J 5 HOH 141 441 126 HOH HOH A . J 5 HOH 142 442 127 HOH HOH A . J 5 HOH 143 443 128 HOH HOH A . J 5 HOH 144 444 129 HOH HOH A . J 5 HOH 145 445 130 HOH HOH A . J 5 HOH 146 446 131 HOH HOH A . J 5 HOH 147 447 132 HOH HOH A . J 5 HOH 148 448 133 HOH HOH A . J 5 HOH 149 449 134 HOH HOH A . J 5 HOH 150 450 135 HOH HOH A . J 5 HOH 151 451 136 HOH HOH A . J 5 HOH 152 452 137 HOH HOH A . J 5 HOH 153 453 138 HOH HOH A . J 5 HOH 154 454 140 HOH HOH A . J 5 HOH 155 455 141 HOH HOH A . J 5 HOH 156 456 142 HOH HOH A . J 5 HOH 157 457 143 HOH HOH A . J 5 HOH 158 458 144 HOH HOH A . J 5 HOH 159 459 145 HOH HOH A . J 5 HOH 160 460 146 HOH HOH A . J 5 HOH 161 461 147 HOH HOH A . J 5 HOH 162 462 148 HOH HOH A . J 5 HOH 163 463 149 HOH HOH A . J 5 HOH 164 464 150 HOH HOH A . J 5 HOH 165 465 151 HOH HOH A . J 5 HOH 166 466 152 HOH HOH A . J 5 HOH 167 467 153 HOH HOH A . J 5 HOH 168 468 154 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 89 ? A HIS 89 ? 1_555 FE A B HEM . ? A HEM 201 ? 1_555 NA A B HEM . ? A HEM 201 ? 1_555 90.3 ? 2 NE2 ? A HIS 89 ? A HIS 89 ? 1_555 FE A B HEM . ? A HEM 201 ? 1_555 NB A B HEM . ? A HEM 201 ? 1_555 91.7 ? 3 NA A B HEM . ? A HEM 201 ? 1_555 FE A B HEM . ? A HEM 201 ? 1_555 NB A B HEM . ? A HEM 201 ? 1_555 88.8 ? 4 NE2 ? A HIS 89 ? A HIS 89 ? 1_555 FE A B HEM . ? A HEM 201 ? 1_555 NC A B HEM . ? A HEM 201 ? 1_555 95.3 ? 5 NA A B HEM . ? A HEM 201 ? 1_555 FE A B HEM . ? A HEM 201 ? 1_555 NC A B HEM . ? A HEM 201 ? 1_555 174.4 ? 6 NB A B HEM . ? A HEM 201 ? 1_555 FE A B HEM . ? A HEM 201 ? 1_555 NC A B HEM . ? A HEM 201 ? 1_555 90.7 ? 7 NE2 ? A HIS 89 ? A HIS 89 ? 1_555 FE A B HEM . ? A HEM 201 ? 1_555 ND A B HEM . ? A HEM 201 ? 1_555 94.4 ? 8 NA A B HEM . ? A HEM 201 ? 1_555 FE A B HEM . ? A HEM 201 ? 1_555 ND A B HEM . ? A HEM 201 ? 1_555 91.4 ? 9 NB A B HEM . ? A HEM 201 ? 1_555 FE A B HEM . ? A HEM 201 ? 1_555 ND A B HEM . ? A HEM 201 ? 1_555 173.9 ? 10 NC A B HEM . ? A HEM 201 ? 1_555 FE A B HEM . ? A HEM 201 ? 1_555 ND A B HEM . ? A HEM 201 ? 1_555 88.5 ? 11 NE2 ? A HIS 89 ? A HIS 89 ? 1_555 FE A B HEM . ? A HEM 201 ? 1_555 N1 A C AZI . ? A AZI 202 ? 1_555 176.5 ? 12 NA A B HEM . ? A HEM 201 ? 1_555 FE A B HEM . ? A HEM 201 ? 1_555 N1 A C AZI . ? A AZI 202 ? 1_555 91.7 ? 13 NB A B HEM . ? A HEM 201 ? 1_555 FE A B HEM . ? A HEM 201 ? 1_555 N1 A C AZI . ? A AZI 202 ? 1_555 91.2 ? 14 NC A B HEM . ? A HEM 201 ? 1_555 FE A B HEM . ? A HEM 201 ? 1_555 N1 A C AZI . ? A AZI 202 ? 1_555 82.7 ? 15 ND A B HEM . ? A HEM 201 ? 1_555 FE A B HEM . ? A HEM 201 ? 1_555 N1 A C AZI . ? A AZI 202 ? 1_555 82.7 ? 16 NE2 ? A HIS 89 ? A HIS 89 ? 1_555 FE B B HEM . ? A HEM 201 ? 1_555 NA A B HEM . ? A HEM 201 ? 1_555 81.5 ? 17 NE2 ? A HIS 89 ? A HIS 89 ? 1_555 FE B B HEM . ? A HEM 201 ? 1_555 NB A B HEM . ? A HEM 201 ? 1_555 84.5 ? 18 NA A B HEM . ? A HEM 201 ? 1_555 FE B B HEM . ? A HEM 201 ? 1_555 NB A B HEM . ? A HEM 201 ? 1_555 90.9 ? 19 NE2 ? A HIS 89 ? A HIS 89 ? 1_555 FE B B HEM . ? A HEM 201 ? 1_555 NC A B HEM . ? A HEM 201 ? 1_555 85.6 ? 20 NA A B HEM . ? A HEM 201 ? 1_555 FE B B HEM . ? A HEM 201 ? 1_555 NC A B HEM . ? A HEM 201 ? 1_555 166.4 ? 21 NB A B HEM . ? A HEM 201 ? 1_555 FE B B HEM . ? A HEM 201 ? 1_555 NC A B HEM . ? A HEM 201 ? 1_555 92.3 ? 22 NE2 ? A HIS 89 ? A HIS 89 ? 1_555 FE B B HEM . ? A HEM 201 ? 1_555 ND A B HEM . ? A HEM 201 ? 1_555 82.9 ? 23 NA A B HEM . ? A HEM 201 ? 1_555 FE B B HEM . ? A HEM 201 ? 1_555 ND A B HEM . ? A HEM 201 ? 1_555 88.5 ? 24 NB A B HEM . ? A HEM 201 ? 1_555 FE B B HEM . ? A HEM 201 ? 1_555 ND A B HEM . ? A HEM 201 ? 1_555 167.3 ? 25 NC A B HEM . ? A HEM 201 ? 1_555 FE B B HEM . ? A HEM 201 ? 1_555 ND A B HEM . ? A HEM 201 ? 1_555 85.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-02-08 2 'Structure model' 1 1 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' struct_conn 6 2 'Structure model' struct_conn_type 7 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_conn.conn_type_id' 4 2 'Structure model' '_struct_conn.id' 5 2 'Structure model' '_struct_conn.pdbx_dist_value' 6 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 2 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 8 2 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 9 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 10 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 11 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 12 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 13 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 14 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 15 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 16 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 17 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 18 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 19 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 20 2 'Structure model' '_struct_conn.ptnr2_label_seq_id' 21 2 'Structure model' '_struct_conn_type.id' 22 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 23 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 24 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 REFMAC refinement 5.5.0109 ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # _pdbx_entry_details.entry_id 3QM9 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE AMINO ACID SEQUENCE OF BLACKFIN TUNA MYOGLOBIN IS NOT AVAILABLE IN UNIPROT SEQUENCE DATABASE. HOWEVER, IT IS ALMOST IDENTICAL TO BLUEFIN (P68189) AND BIGEYE TUNA (Q76G09) MYOGLOBINS, EXCEPT AN H->Q SUBSTITUTION AT RESIDUE 112. THIS SUBSTITUTION ALSO PRESENTS IN OTHER TUNA SPECIES. ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE2 A GLU 70 ? A O A HOH 340 ? ? 1.98 2 1 OD2 A ASP 17 ? A O A HOH 428 ? ? 2.01 3 1 O1D A HEM 201 ? B O A HOH 437 ? ? 2.16 4 1 CD A GLU 70 ? A O A HOH 340 ? ? 2.19 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CE A LYS 38 ? C NZ A LYS 38 ? C 1.692 1.486 0.206 0.025 N 2 1 C A GLY 76 ? B O A GLY 76 ? B 1.118 1.232 -0.114 0.016 N 3 1 CB A ILE 81 ? A CG2 A ILE 81 ? A 1.322 1.524 -0.202 0.031 N 4 1 N A LEU 82 ? ? CA A LEU 82 ? A 1.581 1.459 0.122 0.020 N 5 1 CD A GLU 105 ? A OE1 A GLU 105 ? A 1.135 1.252 -0.117 0.011 N 6 1 CD A GLU 105 ? A OE2 A GLU 105 ? A 1.134 1.252 -0.118 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 17 ? A CG A ASP 17 ? A OD1 A ASP 17 ? A 124.60 118.30 6.30 0.90 N 2 1 NE A ARG 28 ? B CZ A ARG 28 ? B NH2 A ARG 28 ? B 116.29 120.30 -4.01 0.50 N 3 1 OE1 A GLU 32 ? B CD A GLU 32 ? B OE2 A GLU 32 ? B 130.83 123.30 7.53 1.20 N 4 1 CB A ASP 50 ? A CG A ASP 50 ? A OD2 A ASP 50 ? A 112.72 118.30 -5.58 0.90 N 5 1 CA A LEU 82 ? B CB A LEU 82 ? B CG A LEU 82 ? B 95.26 115.30 -20.04 2.30 N 6 1 CB A LEU 82 ? B CG A LEU 82 ? B CD1 A LEU 82 ? B 126.80 111.00 15.80 1.70 N 7 1 OE1 A GLU 105 ? A CD A GLU 105 ? A OE2 A GLU 105 ? A 109.08 123.30 -14.22 1.20 N 8 1 NE A ARG 126 ? A CZ A ARG 126 ? A NH1 A ARG 126 ? A 117.00 120.30 -3.30 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 17 ? ? -155.33 72.79 2 1 ASP A 17 ? ? -147.13 57.12 3 1 PHE A 145 ? A -119.15 74.25 # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag Y _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 0 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id GLY _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 76 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id C _pdbx_unobs_or_zero_occ_atoms.label_alt_id B _pdbx_unobs_or_zero_occ_atoms.label_asym_id A _pdbx_unobs_or_zero_occ_atoms.label_comp_id GLY _pdbx_unobs_or_zero_occ_atoms.label_seq_id 76 _pdbx_unobs_or_zero_occ_atoms.label_atom_id C # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACE C C N N 1 ACE O O N N 2 ACE CH3 C N N 3 ACE H H N N 4 ACE H1 H N N 5 ACE H2 H N N 6 ACE H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 AZI N1 N N N 81 AZI N2 N N N 82 AZI N3 N N N 83 CYS N N N N 84 CYS CA C N R 85 CYS C C N N 86 CYS O O N N 87 CYS CB C N N 88 CYS SG S N N 89 CYS OXT O N N 90 CYS H H N N 91 CYS H2 H N N 92 CYS HA H N N 93 CYS HB2 H N N 94 CYS HB3 H N N 95 CYS HG H N N 96 CYS HXT H N N 97 EDO C1 C N N 98 EDO O1 O N N 99 EDO C2 C N N 100 EDO O2 O N N 101 EDO H11 H N N 102 EDO H12 H N N 103 EDO HO1 H N N 104 EDO H21 H N N 105 EDO H22 H N N 106 EDO HO2 H N N 107 GLN N N N N 108 GLN CA C N S 109 GLN C C N N 110 GLN O O N N 111 GLN CB C N N 112 GLN CG C N N 113 GLN CD C N N 114 GLN OE1 O N N 115 GLN NE2 N N N 116 GLN OXT O N N 117 GLN H H N N 118 GLN H2 H N N 119 GLN HA H N N 120 GLN HB2 H N N 121 GLN HB3 H N N 122 GLN HG2 H N N 123 GLN HG3 H N N 124 GLN HE21 H N N 125 GLN HE22 H N N 126 GLN HXT H N N 127 GLU N N N N 128 GLU CA C N S 129 GLU C C N N 130 GLU O O N N 131 GLU CB C N N 132 GLU CG C N N 133 GLU CD C N N 134 GLU OE1 O N N 135 GLU OE2 O N N 136 GLU OXT O N N 137 GLU H H N N 138 GLU H2 H N N 139 GLU HA H N N 140 GLU HB2 H N N 141 GLU HB3 H N N 142 GLU HG2 H N N 143 GLU HG3 H N N 144 GLU HE2 H N N 145 GLU HXT H N N 146 GLY N N N N 147 GLY CA C N N 148 GLY C C N N 149 GLY O O N N 150 GLY OXT O N N 151 GLY H H N N 152 GLY H2 H N N 153 GLY HA2 H N N 154 GLY HA3 H N N 155 GLY HXT H N N 156 HEM CHA C N N 157 HEM CHB C N N 158 HEM CHC C N N 159 HEM CHD C N N 160 HEM C1A C Y N 161 HEM C2A C Y N 162 HEM C3A C Y N 163 HEM C4A C Y N 164 HEM CMA C N N 165 HEM CAA C N N 166 HEM CBA C N N 167 HEM CGA C N N 168 HEM O1A O N N 169 HEM O2A O N N 170 HEM C1B C N N 171 HEM C2B C N N 172 HEM C3B C N N 173 HEM C4B C N N 174 HEM CMB C N N 175 HEM CAB C N N 176 HEM CBB C N N 177 HEM C1C C Y N 178 HEM C2C C Y N 179 HEM C3C C Y N 180 HEM C4C C Y N 181 HEM CMC C N N 182 HEM CAC C N N 183 HEM CBC C N N 184 HEM C1D C N N 185 HEM C2D C N N 186 HEM C3D C N N 187 HEM C4D C N N 188 HEM CMD C N N 189 HEM CAD C N N 190 HEM CBD C N N 191 HEM CGD C N N 192 HEM O1D O N N 193 HEM O2D O N N 194 HEM NA N Y N 195 HEM NB N N N 196 HEM NC N Y N 197 HEM ND N N N 198 HEM FE FE N N 199 HEM HHB H N N 200 HEM HHC H N N 201 HEM HHD H N N 202 HEM HMA H N N 203 HEM HMAA H N N 204 HEM HMAB H N N 205 HEM HAA H N N 206 HEM HAAA H N N 207 HEM HBA H N N 208 HEM HBAA H N N 209 HEM HMB H N N 210 HEM HMBA H N N 211 HEM HMBB H N N 212 HEM HAB H N N 213 HEM HBB H N N 214 HEM HBBA H N N 215 HEM HMC H N N 216 HEM HMCA H N N 217 HEM HMCB H N N 218 HEM HAC H N N 219 HEM HBC H N N 220 HEM HBCA H N N 221 HEM HMD H N N 222 HEM HMDA H N N 223 HEM HMDB H N N 224 HEM HAD H N N 225 HEM HADA H N N 226 HEM HBD H N N 227 HEM HBDA H N N 228 HEM H2A H N N 229 HEM H2D H N N 230 HEM HHA H N N 231 HIS N N N N 232 HIS CA C N S 233 HIS C C N N 234 HIS O O N N 235 HIS CB C N N 236 HIS CG C Y N 237 HIS ND1 N Y N 238 HIS CD2 C Y N 239 HIS CE1 C Y N 240 HIS NE2 N Y N 241 HIS OXT O N N 242 HIS H H N N 243 HIS H2 H N N 244 HIS HA H N N 245 HIS HB2 H N N 246 HIS HB3 H N N 247 HIS HD1 H N N 248 HIS HD2 H N N 249 HIS HE1 H N N 250 HIS HE2 H N N 251 HIS HXT H N N 252 HOH O O N N 253 HOH H1 H N N 254 HOH H2 H N N 255 ILE N N N N 256 ILE CA C N S 257 ILE C C N N 258 ILE O O N N 259 ILE CB C N S 260 ILE CG1 C N N 261 ILE CG2 C N N 262 ILE CD1 C N N 263 ILE OXT O N N 264 ILE H H N N 265 ILE H2 H N N 266 ILE HA H N N 267 ILE HB H N N 268 ILE HG12 H N N 269 ILE HG13 H N N 270 ILE HG21 H N N 271 ILE HG22 H N N 272 ILE HG23 H N N 273 ILE HD11 H N N 274 ILE HD12 H N N 275 ILE HD13 H N N 276 ILE HXT H N N 277 LEU N N N N 278 LEU CA C N S 279 LEU C C N N 280 LEU O O N N 281 LEU CB C N N 282 LEU CG C N N 283 LEU CD1 C N N 284 LEU CD2 C N N 285 LEU OXT O N N 286 LEU H H N N 287 LEU H2 H N N 288 LEU HA H N N 289 LEU HB2 H N N 290 LEU HB3 H N N 291 LEU HG H N N 292 LEU HD11 H N N 293 LEU HD12 H N N 294 LEU HD13 H N N 295 LEU HD21 H N N 296 LEU HD22 H N N 297 LEU HD23 H N N 298 LEU HXT H N N 299 LYS N N N N 300 LYS CA C N S 301 LYS C C N N 302 LYS O O N N 303 LYS CB C N N 304 LYS CG C N N 305 LYS CD C N N 306 LYS CE C N N 307 LYS NZ N N N 308 LYS OXT O N N 309 LYS H H N N 310 LYS H2 H N N 311 LYS HA H N N 312 LYS HB2 H N N 313 LYS HB3 H N N 314 LYS HG2 H N N 315 LYS HG3 H N N 316 LYS HD2 H N N 317 LYS HD3 H N N 318 LYS HE2 H N N 319 LYS HE3 H N N 320 LYS HZ1 H N N 321 LYS HZ2 H N N 322 LYS HZ3 H N N 323 LYS HXT H N N 324 MET N N N N 325 MET CA C N S 326 MET C C N N 327 MET O O N N 328 MET CB C N N 329 MET CG C N N 330 MET SD S N N 331 MET CE C N N 332 MET OXT O N N 333 MET H H N N 334 MET H2 H N N 335 MET HA H N N 336 MET HB2 H N N 337 MET HB3 H N N 338 MET HG2 H N N 339 MET HG3 H N N 340 MET HE1 H N N 341 MET HE2 H N N 342 MET HE3 H N N 343 MET HXT H N N 344 PHE N N N N 345 PHE CA C N S 346 PHE C C N N 347 PHE O O N N 348 PHE CB C N N 349 PHE CG C Y N 350 PHE CD1 C Y N 351 PHE CD2 C Y N 352 PHE CE1 C Y N 353 PHE CE2 C Y N 354 PHE CZ C Y N 355 PHE OXT O N N 356 PHE H H N N 357 PHE H2 H N N 358 PHE HA H N N 359 PHE HB2 H N N 360 PHE HB3 H N N 361 PHE HD1 H N N 362 PHE HD2 H N N 363 PHE HE1 H N N 364 PHE HE2 H N N 365 PHE HZ H N N 366 PHE HXT H N N 367 PRO N N N N 368 PRO CA C N S 369 PRO C C N N 370 PRO O O N N 371 PRO CB C N N 372 PRO CG C N N 373 PRO CD C N N 374 PRO OXT O N N 375 PRO H H N N 376 PRO HA H N N 377 PRO HB2 H N N 378 PRO HB3 H N N 379 PRO HG2 H N N 380 PRO HG3 H N N 381 PRO HD2 H N N 382 PRO HD3 H N N 383 PRO HXT H N N 384 SER N N N N 385 SER CA C N S 386 SER C C N N 387 SER O O N N 388 SER CB C N N 389 SER OG O N N 390 SER OXT O N N 391 SER H H N N 392 SER H2 H N N 393 SER HA H N N 394 SER HB2 H N N 395 SER HB3 H N N 396 SER HG H N N 397 SER HXT H N N 398 THR N N N N 399 THR CA C N S 400 THR C C N N 401 THR O O N N 402 THR CB C N R 403 THR OG1 O N N 404 THR CG2 C N N 405 THR OXT O N N 406 THR H H N N 407 THR H2 H N N 408 THR HA H N N 409 THR HB H N N 410 THR HG1 H N N 411 THR HG21 H N N 412 THR HG22 H N N 413 THR HG23 H N N 414 THR HXT H N N 415 TRP N N N N 416 TRP CA C N S 417 TRP C C N N 418 TRP O O N N 419 TRP CB C N N 420 TRP CG C Y N 421 TRP CD1 C Y N 422 TRP CD2 C Y N 423 TRP NE1 N Y N 424 TRP CE2 C Y N 425 TRP CE3 C Y N 426 TRP CZ2 C Y N 427 TRP CZ3 C Y N 428 TRP CH2 C Y N 429 TRP OXT O N N 430 TRP H H N N 431 TRP H2 H N N 432 TRP HA H N N 433 TRP HB2 H N N 434 TRP HB3 H N N 435 TRP HD1 H N N 436 TRP HE1 H N N 437 TRP HE3 H N N 438 TRP HZ2 H N N 439 TRP HZ3 H N N 440 TRP HH2 H N N 441 TRP HXT H N N 442 TYR N N N N 443 TYR CA C N S 444 TYR C C N N 445 TYR O O N N 446 TYR CB C N N 447 TYR CG C Y N 448 TYR CD1 C Y N 449 TYR CD2 C Y N 450 TYR CE1 C Y N 451 TYR CE2 C Y N 452 TYR CZ C Y N 453 TYR OH O N N 454 TYR OXT O N N 455 TYR H H N N 456 TYR H2 H N N 457 TYR HA H N N 458 TYR HB2 H N N 459 TYR HB3 H N N 460 TYR HD1 H N N 461 TYR HD2 H N N 462 TYR HE1 H N N 463 TYR HE2 H N N 464 TYR HH H N N 465 TYR HXT H N N 466 VAL N N N N 467 VAL CA C N S 468 VAL C C N N 469 VAL O O N N 470 VAL CB C N N 471 VAL CG1 C N N 472 VAL CG2 C N N 473 VAL OXT O N N 474 VAL H H N N 475 VAL H2 H N N 476 VAL HA H N N 477 VAL HB H N N 478 VAL HG11 H N N 479 VAL HG12 H N N 480 VAL HG13 H N N 481 VAL HG21 H N N 482 VAL HG22 H N N 483 VAL HG23 H N N 484 VAL HXT H N N 485 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACE C O doub N N 1 ACE C CH3 sing N N 2 ACE C H sing N N 3 ACE CH3 H1 sing N N 4 ACE CH3 H2 sing N N 5 ACE CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 AZI N1 N2 doub N N 76 AZI N2 N3 doub N N 77 CYS N CA sing N N 78 CYS N H sing N N 79 CYS N H2 sing N N 80 CYS CA C sing N N 81 CYS CA CB sing N N 82 CYS CA HA sing N N 83 CYS C O doub N N 84 CYS C OXT sing N N 85 CYS CB SG sing N N 86 CYS CB HB2 sing N N 87 CYS CB HB3 sing N N 88 CYS SG HG sing N N 89 CYS OXT HXT sing N N 90 EDO C1 O1 sing N N 91 EDO C1 C2 sing N N 92 EDO C1 H11 sing N N 93 EDO C1 H12 sing N N 94 EDO O1 HO1 sing N N 95 EDO C2 O2 sing N N 96 EDO C2 H21 sing N N 97 EDO C2 H22 sing N N 98 EDO O2 HO2 sing N N 99 GLN N CA sing N N 100 GLN N H sing N N 101 GLN N H2 sing N N 102 GLN CA C sing N N 103 GLN CA CB sing N N 104 GLN CA HA sing N N 105 GLN C O doub N N 106 GLN C OXT sing N N 107 GLN CB CG sing N N 108 GLN CB HB2 sing N N 109 GLN CB HB3 sing N N 110 GLN CG CD sing N N 111 GLN CG HG2 sing N N 112 GLN CG HG3 sing N N 113 GLN CD OE1 doub N N 114 GLN CD NE2 sing N N 115 GLN NE2 HE21 sing N N 116 GLN NE2 HE22 sing N N 117 GLN OXT HXT sing N N 118 GLU N CA sing N N 119 GLU N H sing N N 120 GLU N H2 sing N N 121 GLU CA C sing N N 122 GLU CA CB sing N N 123 GLU CA HA sing N N 124 GLU C O doub N N 125 GLU C OXT sing N N 126 GLU CB CG sing N N 127 GLU CB HB2 sing N N 128 GLU CB HB3 sing N N 129 GLU CG CD sing N N 130 GLU CG HG2 sing N N 131 GLU CG HG3 sing N N 132 GLU CD OE1 doub N N 133 GLU CD OE2 sing N N 134 GLU OE2 HE2 sing N N 135 GLU OXT HXT sing N N 136 GLY N CA sing N N 137 GLY N H sing N N 138 GLY N H2 sing N N 139 GLY CA C sing N N 140 GLY CA HA2 sing N N 141 GLY CA HA3 sing N N 142 GLY C O doub N N 143 GLY C OXT sing N N 144 GLY OXT HXT sing N N 145 HEM CHA C1A sing N N 146 HEM CHA C4D doub N N 147 HEM CHA HHA sing N N 148 HEM CHB C4A sing N N 149 HEM CHB C1B doub N N 150 HEM CHB HHB sing N N 151 HEM CHC C4B sing N N 152 HEM CHC C1C doub N N 153 HEM CHC HHC sing N N 154 HEM CHD C4C doub N N 155 HEM CHD C1D sing N N 156 HEM CHD HHD sing N N 157 HEM C1A C2A doub Y N 158 HEM C1A NA sing Y N 159 HEM C2A C3A sing Y N 160 HEM C2A CAA sing N N 161 HEM C3A C4A doub Y N 162 HEM C3A CMA sing N N 163 HEM C4A NA sing Y N 164 HEM CMA HMA sing N N 165 HEM CMA HMAA sing N N 166 HEM CMA HMAB sing N N 167 HEM CAA CBA sing N N 168 HEM CAA HAA sing N N 169 HEM CAA HAAA sing N N 170 HEM CBA CGA sing N N 171 HEM CBA HBA sing N N 172 HEM CBA HBAA sing N N 173 HEM CGA O1A doub N N 174 HEM CGA O2A sing N N 175 HEM C1B C2B sing N N 176 HEM C1B NB sing N N 177 HEM C2B C3B doub N N 178 HEM C2B CMB sing N N 179 HEM C3B C4B sing N N 180 HEM C3B CAB sing N N 181 HEM C4B NB doub N N 182 HEM CMB HMB sing N N 183 HEM CMB HMBA sing N N 184 HEM CMB HMBB sing N N 185 HEM CAB CBB doub N N 186 HEM CAB HAB sing N N 187 HEM CBB HBB sing N N 188 HEM CBB HBBA sing N N 189 HEM C1C C2C sing Y N 190 HEM C1C NC sing Y N 191 HEM C2C C3C doub Y N 192 HEM C2C CMC sing N N 193 HEM C3C C4C sing Y N 194 HEM C3C CAC sing N N 195 HEM C4C NC sing Y N 196 HEM CMC HMC sing N N 197 HEM CMC HMCA sing N N 198 HEM CMC HMCB sing N N 199 HEM CAC CBC doub N N 200 HEM CAC HAC sing N N 201 HEM CBC HBC sing N N 202 HEM CBC HBCA sing N N 203 HEM C1D C2D sing N N 204 HEM C1D ND doub N N 205 HEM C2D C3D doub N N 206 HEM C2D CMD sing N N 207 HEM C3D C4D sing N N 208 HEM C3D CAD sing N N 209 HEM C4D ND sing N N 210 HEM CMD HMD sing N N 211 HEM CMD HMDA sing N N 212 HEM CMD HMDB sing N N 213 HEM CAD CBD sing N N 214 HEM CAD HAD sing N N 215 HEM CAD HADA sing N N 216 HEM CBD CGD sing N N 217 HEM CBD HBD sing N N 218 HEM CBD HBDA sing N N 219 HEM CGD O1D doub N N 220 HEM CGD O2D sing N N 221 HEM O2A H2A sing N N 222 HEM O2D H2D sing N N 223 HEM FE NA sing N N 224 HEM FE NB sing N N 225 HEM FE NC sing N N 226 HEM FE ND sing N N 227 HIS N CA sing N N 228 HIS N H sing N N 229 HIS N H2 sing N N 230 HIS CA C sing N N 231 HIS CA CB sing N N 232 HIS CA HA sing N N 233 HIS C O doub N N 234 HIS C OXT sing N N 235 HIS CB CG sing N N 236 HIS CB HB2 sing N N 237 HIS CB HB3 sing N N 238 HIS CG ND1 sing Y N 239 HIS CG CD2 doub Y N 240 HIS ND1 CE1 doub Y N 241 HIS ND1 HD1 sing N N 242 HIS CD2 NE2 sing Y N 243 HIS CD2 HD2 sing N N 244 HIS CE1 NE2 sing Y N 245 HIS CE1 HE1 sing N N 246 HIS NE2 HE2 sing N N 247 HIS OXT HXT sing N N 248 HOH O H1 sing N N 249 HOH O H2 sing N N 250 ILE N CA sing N N 251 ILE N H sing N N 252 ILE N H2 sing N N 253 ILE CA C sing N N 254 ILE CA CB sing N N 255 ILE CA HA sing N N 256 ILE C O doub N N 257 ILE C OXT sing N N 258 ILE CB CG1 sing N N 259 ILE CB CG2 sing N N 260 ILE CB HB sing N N 261 ILE CG1 CD1 sing N N 262 ILE CG1 HG12 sing N N 263 ILE CG1 HG13 sing N N 264 ILE CG2 HG21 sing N N 265 ILE CG2 HG22 sing N N 266 ILE CG2 HG23 sing N N 267 ILE CD1 HD11 sing N N 268 ILE CD1 HD12 sing N N 269 ILE CD1 HD13 sing N N 270 ILE OXT HXT sing N N 271 LEU N CA sing N N 272 LEU N H sing N N 273 LEU N H2 sing N N 274 LEU CA C sing N N 275 LEU CA CB sing N N 276 LEU CA HA sing N N 277 LEU C O doub N N 278 LEU C OXT sing N N 279 LEU CB CG sing N N 280 LEU CB HB2 sing N N 281 LEU CB HB3 sing N N 282 LEU CG CD1 sing N N 283 LEU CG CD2 sing N N 284 LEU CG HG sing N N 285 LEU CD1 HD11 sing N N 286 LEU CD1 HD12 sing N N 287 LEU CD1 HD13 sing N N 288 LEU CD2 HD21 sing N N 289 LEU CD2 HD22 sing N N 290 LEU CD2 HD23 sing N N 291 LEU OXT HXT sing N N 292 LYS N CA sing N N 293 LYS N H sing N N 294 LYS N H2 sing N N 295 LYS CA C sing N N 296 LYS CA CB sing N N 297 LYS CA HA sing N N 298 LYS C O doub N N 299 LYS C OXT sing N N 300 LYS CB CG sing N N 301 LYS CB HB2 sing N N 302 LYS CB HB3 sing N N 303 LYS CG CD sing N N 304 LYS CG HG2 sing N N 305 LYS CG HG3 sing N N 306 LYS CD CE sing N N 307 LYS CD HD2 sing N N 308 LYS CD HD3 sing N N 309 LYS CE NZ sing N N 310 LYS CE HE2 sing N N 311 LYS CE HE3 sing N N 312 LYS NZ HZ1 sing N N 313 LYS NZ HZ2 sing N N 314 LYS NZ HZ3 sing N N 315 LYS OXT HXT sing N N 316 MET N CA sing N N 317 MET N H sing N N 318 MET N H2 sing N N 319 MET CA C sing N N 320 MET CA CB sing N N 321 MET CA HA sing N N 322 MET C O doub N N 323 MET C OXT sing N N 324 MET CB CG sing N N 325 MET CB HB2 sing N N 326 MET CB HB3 sing N N 327 MET CG SD sing N N 328 MET CG HG2 sing N N 329 MET CG HG3 sing N N 330 MET SD CE sing N N 331 MET CE HE1 sing N N 332 MET CE HE2 sing N N 333 MET CE HE3 sing N N 334 MET OXT HXT sing N N 335 PHE N CA sing N N 336 PHE N H sing N N 337 PHE N H2 sing N N 338 PHE CA C sing N N 339 PHE CA CB sing N N 340 PHE CA HA sing N N 341 PHE C O doub N N 342 PHE C OXT sing N N 343 PHE CB CG sing N N 344 PHE CB HB2 sing N N 345 PHE CB HB3 sing N N 346 PHE CG CD1 doub Y N 347 PHE CG CD2 sing Y N 348 PHE CD1 CE1 sing Y N 349 PHE CD1 HD1 sing N N 350 PHE CD2 CE2 doub Y N 351 PHE CD2 HD2 sing N N 352 PHE CE1 CZ doub Y N 353 PHE CE1 HE1 sing N N 354 PHE CE2 CZ sing Y N 355 PHE CE2 HE2 sing N N 356 PHE CZ HZ sing N N 357 PHE OXT HXT sing N N 358 PRO N CA sing N N 359 PRO N CD sing N N 360 PRO N H sing N N 361 PRO CA C sing N N 362 PRO CA CB sing N N 363 PRO CA HA sing N N 364 PRO C O doub N N 365 PRO C OXT sing N N 366 PRO CB CG sing N N 367 PRO CB HB2 sing N N 368 PRO CB HB3 sing N N 369 PRO CG CD sing N N 370 PRO CG HG2 sing N N 371 PRO CG HG3 sing N N 372 PRO CD HD2 sing N N 373 PRO CD HD3 sing N N 374 PRO OXT HXT sing N N 375 SER N CA sing N N 376 SER N H sing N N 377 SER N H2 sing N N 378 SER CA C sing N N 379 SER CA CB sing N N 380 SER CA HA sing N N 381 SER C O doub N N 382 SER C OXT sing N N 383 SER CB OG sing N N 384 SER CB HB2 sing N N 385 SER CB HB3 sing N N 386 SER OG HG sing N N 387 SER OXT HXT sing N N 388 THR N CA sing N N 389 THR N H sing N N 390 THR N H2 sing N N 391 THR CA C sing N N 392 THR CA CB sing N N 393 THR CA HA sing N N 394 THR C O doub N N 395 THR C OXT sing N N 396 THR CB OG1 sing N N 397 THR CB CG2 sing N N 398 THR CB HB sing N N 399 THR OG1 HG1 sing N N 400 THR CG2 HG21 sing N N 401 THR CG2 HG22 sing N N 402 THR CG2 HG23 sing N N 403 THR OXT HXT sing N N 404 TRP N CA sing N N 405 TRP N H sing N N 406 TRP N H2 sing N N 407 TRP CA C sing N N 408 TRP CA CB sing N N 409 TRP CA HA sing N N 410 TRP C O doub N N 411 TRP C OXT sing N N 412 TRP CB CG sing N N 413 TRP CB HB2 sing N N 414 TRP CB HB3 sing N N 415 TRP CG CD1 doub Y N 416 TRP CG CD2 sing Y N 417 TRP CD1 NE1 sing Y N 418 TRP CD1 HD1 sing N N 419 TRP CD2 CE2 doub Y N 420 TRP CD2 CE3 sing Y N 421 TRP NE1 CE2 sing Y N 422 TRP NE1 HE1 sing N N 423 TRP CE2 CZ2 sing Y N 424 TRP CE3 CZ3 doub Y N 425 TRP CE3 HE3 sing N N 426 TRP CZ2 CH2 doub Y N 427 TRP CZ2 HZ2 sing N N 428 TRP CZ3 CH2 sing Y N 429 TRP CZ3 HZ3 sing N N 430 TRP CH2 HH2 sing N N 431 TRP OXT HXT sing N N 432 TYR N CA sing N N 433 TYR N H sing N N 434 TYR N H2 sing N N 435 TYR CA C sing N N 436 TYR CA CB sing N N 437 TYR CA HA sing N N 438 TYR C O doub N N 439 TYR C OXT sing N N 440 TYR CB CG sing N N 441 TYR CB HB2 sing N N 442 TYR CB HB3 sing N N 443 TYR CG CD1 doub Y N 444 TYR CG CD2 sing Y N 445 TYR CD1 CE1 sing Y N 446 TYR CD1 HD1 sing N N 447 TYR CD2 CE2 doub Y N 448 TYR CD2 HD2 sing N N 449 TYR CE1 CZ doub Y N 450 TYR CE1 HE1 sing N N 451 TYR CE2 CZ sing Y N 452 TYR CE2 HE2 sing N N 453 TYR CZ OH sing N N 454 TYR OH HH sing N N 455 TYR OXT HXT sing N N 456 VAL N CA sing N N 457 VAL N H sing N N 458 VAL N H2 sing N N 459 VAL CA C sing N N 460 VAL CA CB sing N N 461 VAL CA HA sing N N 462 VAL C O doub N N 463 VAL C OXT sing N N 464 VAL CB CG1 sing N N 465 VAL CB CG2 sing N N 466 VAL CB HB sing N N 467 VAL CG1 HG11 sing N N 468 VAL CG1 HG12 sing N N 469 VAL CG1 HG13 sing N N 470 VAL CG2 HG21 sing N N 471 VAL CG2 HG22 sing N N 472 VAL CG2 HG23 sing N N 473 VAL OXT HXT sing N N 474 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PROTOPORPHYRIN IX CONTAINING FE' HEM 3 'AZIDE ION' AZI 4 1,2-ETHANEDIOL EDO 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2NRL _pdbx_initial_refinement_model.details 'PDB entry 2NRL' #