HEADER RNA BINDING PROTEIN 09-FEB-11 3QO3 TITLE CRYSTAL STRUCTURE OF ESCHERICHIA COLI HFQ, IN COMPLEX WITH ATP COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN HFQ; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 FRAGMENT: N-TERMINAL (L)SM CORE-DOMAIN, UNP RESIDUES 1-65; COMPND 5 SYNONYM: HF-1, HOST FACTOR-I PROTEIN, HF-I; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K-12; SOURCE 5 GENE: B4172, HFQ, JW4130; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PUC19 KEYWDS RNA BINDING PROTEIN, SM-LIKE, PLEIOTROPIC REGULATOR, RNA CHAPERONE, KEYWDS 2 ATP-BINDING EXPDTA X-RAY DIFFRACTION AUTHOR M.BEICH-FRANDSEN,B.VECEREK,H.HAMMELE,K.KLOIBER,B.SJOEBLOM,U.BLASI, AUTHOR 2 K.DJINOVIC-CARUGO REVDAT 3 01-NOV-23 3QO3 1 REMARK REVDAT 2 27-MAR-13 3QO3 1 JRNL REVDAT 1 15-FEB-12 3QO3 0 JRNL AUTH H.HAMMERLE,M.BEICH-FRANDSEN,B.VECEREK,L.RAJKOWITSCH, JRNL AUTH 2 O.CARUGO,K.DJINOVIC-CARUGO,U.BLASI JRNL TITL STRUCTURAL AND BIOCHEMICAL STUDIES ON ATP BINDING AND JRNL TITL 2 HYDROLYSIS BY THE ESCHERICHIA COLI RNA CHAPERONE HFQ JRNL REF PLOS ONE V. 7 50892 2012 JRNL REFN ESSN 1932-6203 JRNL PMID 23226421 JRNL DOI 10.1371/JOURNAL.PONE.0050892 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 21689 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1167 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.21 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1586 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2870 REMARK 3 BIN FREE R VALUE SET COUNT : 79 REMARK 3 BIN FREE R VALUE : 0.3770 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2934 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 124 REMARK 3 SOLVENT ATOMS : 244 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.05 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.03000 REMARK 3 B22 (A**2) : 1.55000 REMARK 3 B33 (A**2) : -1.56000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.04000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.220 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.153 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.967 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.928 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.906 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3114 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4252 ; 1.219 ; 2.025 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 360 ; 8.659 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 132 ;32.867 ;24.545 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 546 ;13.583 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;20.511 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 502 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2240 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1836 ; 1.154 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3018 ; 1.969 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1278 ; 3.085 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1234 ; 4.316 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3QO3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-FEB-11. REMARK 100 THE DEPOSITION ID IS D_1000063888. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUL-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9334 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21783 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 98.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 200 DATA REDUNDANCY : 5.610 REMARK 200 R MERGE (I) : 0.11100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.9600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.62 REMARK 200 R MERGE FOR SHELL (I) : 0.43200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1HK9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES, 10% (W/V) PEG 8000, 8% REMARK 280 (V/V) ETHYLENE GLYCOL, PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 52.15000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 20.31000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 52.15000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 20.31000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -71.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 LYS A 3 REMARK 465 GLY A 4 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 LYS B 3 REMARK 465 GLY B 4 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 LYS C 3 REMARK 465 GLY C 4 REMARK 465 MET D 1 REMARK 465 ALA D 2 REMARK 465 LYS D 3 REMARK 465 GLY D 4 REMARK 465 MET E 1 REMARK 465 ALA E 2 REMARK 465 LYS E 3 REMARK 465 GLY E 4 REMARK 465 MET F 1 REMARK 465 ALA F 2 REMARK 465 LYS F 3 REMARK 465 GLY F 4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH F 89 O HOH F 155 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 40 -158.47 -128.25 REMARK 500 ASN A 48 -78.65 -133.23 REMARK 500 ASP B 40 -157.36 -127.01 REMARK 500 LYS B 47 -156.09 -66.28 REMARK 500 ASP C 40 -157.91 -132.69 REMARK 500 ASN C 48 -76.07 -138.27 REMARK 500 ASP D 40 -154.50 -121.16 REMARK 500 ASN D 48 -83.86 -137.89 REMARK 500 ASP E 40 -152.58 -131.42 REMARK 500 ASN E 48 -88.76 -133.40 REMARK 500 ASN F 48 146.13 172.30 REMARK 500 THR F 49 -69.32 81.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER B 6 LEU B 7 147.62 REMARK 500 LYS B 47 ASN B 48 -135.92 REMARK 500 LYS D 47 ASN D 48 138.23 REMARK 500 GLN E 5 SER E 6 -130.38 REMARK 500 LYS F 47 ASN F 48 118.13 REMARK 500 ASN F 48 THR F 49 -148.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 66 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP B 66 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP C 66 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP D 66 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3QHS RELATED DB: PDB DBREF 3QO3 A 1 65 UNP P0A6X3 HFQ_ECOLI 1 65 DBREF 3QO3 B 1 65 UNP P0A6X3 HFQ_ECOLI 1 65 DBREF 3QO3 C 1 65 UNP P0A6X3 HFQ_ECOLI 1 65 DBREF 3QO3 D 1 65 UNP P0A6X3 HFQ_ECOLI 1 65 DBREF 3QO3 E 1 65 UNP P0A6X3 HFQ_ECOLI 1 65 DBREF 3QO3 F 1 65 UNP P0A6X3 HFQ_ECOLI 1 65 SEQRES 1 A 65 MET ALA LYS GLY GLN SER LEU GLN ASP PRO PHE LEU ASN SEQRES 2 A 65 ALA LEU ARG ARG GLU ARG VAL PRO VAL SER ILE TYR LEU SEQRES 3 A 65 VAL ASN GLY ILE LYS LEU GLN GLY GLN ILE GLU SER PHE SEQRES 4 A 65 ASP GLN PHE VAL ILE LEU LEU LYS ASN THR VAL SER GLN SEQRES 5 A 65 MET VAL TYR LYS HIS ALA ILE SER THR VAL VAL PRO SER SEQRES 1 B 65 MET ALA LYS GLY GLN SER LEU GLN ASP PRO PHE LEU ASN SEQRES 2 B 65 ALA LEU ARG ARG GLU ARG VAL PRO VAL SER ILE TYR LEU SEQRES 3 B 65 VAL ASN GLY ILE LYS LEU GLN GLY GLN ILE GLU SER PHE SEQRES 4 B 65 ASP GLN PHE VAL ILE LEU LEU LYS ASN THR VAL SER GLN SEQRES 5 B 65 MET VAL TYR LYS HIS ALA ILE SER THR VAL VAL PRO SER SEQRES 1 C 65 MET ALA LYS GLY GLN SER LEU GLN ASP PRO PHE LEU ASN SEQRES 2 C 65 ALA LEU ARG ARG GLU ARG VAL PRO VAL SER ILE TYR LEU SEQRES 3 C 65 VAL ASN GLY ILE LYS LEU GLN GLY GLN ILE GLU SER PHE SEQRES 4 C 65 ASP GLN PHE VAL ILE LEU LEU LYS ASN THR VAL SER GLN SEQRES 5 C 65 MET VAL TYR LYS HIS ALA ILE SER THR VAL VAL PRO SER SEQRES 1 D 65 MET ALA LYS GLY GLN SER LEU GLN ASP PRO PHE LEU ASN SEQRES 2 D 65 ALA LEU ARG ARG GLU ARG VAL PRO VAL SER ILE TYR LEU SEQRES 3 D 65 VAL ASN GLY ILE LYS LEU GLN GLY GLN ILE GLU SER PHE SEQRES 4 D 65 ASP GLN PHE VAL ILE LEU LEU LYS ASN THR VAL SER GLN SEQRES 5 D 65 MET VAL TYR LYS HIS ALA ILE SER THR VAL VAL PRO SER SEQRES 1 E 65 MET ALA LYS GLY GLN SER LEU GLN ASP PRO PHE LEU ASN SEQRES 2 E 65 ALA LEU ARG ARG GLU ARG VAL PRO VAL SER ILE TYR LEU SEQRES 3 E 65 VAL ASN GLY ILE LYS LEU GLN GLY GLN ILE GLU SER PHE SEQRES 4 E 65 ASP GLN PHE VAL ILE LEU LEU LYS ASN THR VAL SER GLN SEQRES 5 E 65 MET VAL TYR LYS HIS ALA ILE SER THR VAL VAL PRO SER SEQRES 1 F 65 MET ALA LYS GLY GLN SER LEU GLN ASP PRO PHE LEU ASN SEQRES 2 F 65 ALA LEU ARG ARG GLU ARG VAL PRO VAL SER ILE TYR LEU SEQRES 3 F 65 VAL ASN GLY ILE LYS LEU GLN GLY GLN ILE GLU SER PHE SEQRES 4 F 65 ASP GLN PHE VAL ILE LEU LEU LYS ASN THR VAL SER GLN SEQRES 5 F 65 MET VAL TYR LYS HIS ALA ILE SER THR VAL VAL PRO SER HET ATP A 66 31 HET ATP B 66 31 HET ATP C 66 31 HET ATP D 66 31 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE FORMUL 7 ATP 4(C10 H16 N5 O13 P3) FORMUL 11 HOH *244(H2 O) HELIX 1 1 LEU A 7 GLU A 18 1 12 HELIX 2 2 LEU B 7 GLU B 18 1 12 HELIX 3 3 LEU C 7 GLU C 18 1 12 HELIX 4 4 LEU D 7 GLU D 18 1 12 HELIX 5 5 LEU E 7 GLU E 18 1 12 HELIX 6 6 LEU F 7 GLU F 18 1 12 SHEET 1 A31 VAL A 22 LEU A 26 0 SHEET 2 A31 LYS A 31 PHE A 39 -1 O LEU A 32 N ILE A 24 SHEET 3 A31 VAL A 43 LYS A 47 -1 O LEU A 45 N SER A 38 SHEET 4 A31 SER A 51 TYR A 55 -1 O GLN A 52 N LEU A 46 SHEET 5 A31 ILE F 59 PRO F 64 -1 O VAL F 62 N MET A 53 SHEET 6 A31 PRO F 21 LEU F 26 -1 N SER F 23 O VAL F 63 SHEET 7 A31 LYS F 31 PHE F 39 -1 O LEU F 32 N ILE F 24 SHEET 8 A31 VAL F 43 LYS F 47 -1 O LEU F 45 N SER F 38 SHEET 9 A31 SER F 51 TYR F 55 -1 O VAL F 54 N ILE F 44 SHEET 10 A31 ILE E 59 PRO E 64 -1 N SER E 60 O TYR F 55 SHEET 11 A31 PRO E 21 LEU E 26 -1 N TYR E 25 O SER E 60 SHEET 12 A31 LYS E 31 PHE E 39 -1 O LEU E 32 N ILE E 24 SHEET 13 A31 VAL E 43 LYS E 47 -1 O LEU E 45 N SER E 38 SHEET 14 A31 SER E 51 TYR E 55 -1 O GLN E 52 N LEU E 46 SHEET 15 A31 ILE D 59 PRO D 64 -1 N VAL D 62 O MET E 53 SHEET 16 A31 PRO D 21 LEU D 26 -1 N SER D 23 O VAL D 63 SHEET 17 A31 LYS D 31 PHE D 39 -1 O GLY D 34 N VAL D 22 SHEET 18 A31 VAL D 43 LYS D 47 -1 O LEU D 45 N SER D 38 SHEET 19 A31 SER D 51 TYR D 55 -1 O VAL D 54 N ILE D 44 SHEET 20 A31 ILE C 59 PRO C 64 -1 N SER C 60 O TYR D 55 SHEET 21 A31 PRO C 21 LEU C 26 -1 N SER C 23 O VAL C 63 SHEET 22 A31 LYS C 31 PHE C 39 -1 O LEU C 32 N ILE C 24 SHEET 23 A31 VAL C 43 LYS C 47 -1 O LYS C 47 N GLN C 35 SHEET 24 A31 SER C 51 TYR C 55 -1 O GLN C 52 N LEU C 46 SHEET 25 A31 ILE B 59 PRO B 64 -1 N SER B 60 O TYR C 55 SHEET 26 A31 PRO B 21 LEU B 26 -1 N SER B 23 O VAL B 63 SHEET 27 A31 LYS B 31 PHE B 39 -1 O LEU B 32 N ILE B 24 SHEET 28 A31 VAL B 43 LEU B 46 -1 O LEU B 45 N SER B 38 SHEET 29 A31 GLN B 52 TYR B 55 -1 O VAL B 54 N ILE B 44 SHEET 30 A31 ILE A 59 PRO A 64 -1 N SER A 60 O TYR B 55 SHEET 31 A31 VAL A 22 LEU A 26 -1 N SER A 23 O VAL A 63 CISPEP 1 ASN B 48 THR B 49 0 14.29 SITE 1 AC1 13 TYR A 25 GLY A 29 SER A 60 THR A 61 SITE 2 AC1 13 HOH A 69 HOH A 202 LEU B 26 ILE B 30 SITE 3 AC1 13 LYS B 31 LEU B 32 GLN B 52 HOH B 69 SITE 4 AC1 13 ARG E 19 SITE 1 AC2 11 TYR B 25 GLY B 29 LYS B 31 THR B 61 SITE 2 AC2 11 HOH B 229 HOH B 231 HOH B 237 HOH B 242 SITE 3 AC2 11 ILE C 30 LEU C 32 GLN C 52 SITE 1 AC3 7 TYR C 25 GLY C 29 LYS C 31 THR C 61 SITE 2 AC3 7 ILE D 30 LEU D 32 GLN D 52 SITE 1 AC4 11 ARG B 19 TYR D 25 GLY D 29 LYS D 31 SITE 2 AC4 11 SER D 60 THR D 61 HOH D 206 LEU E 26 SITE 3 AC4 11 ILE E 30 LEU E 32 HOH E 182 CRYST1 104.300 40.620 100.810 90.00 101.81 90.00 C 1 2 1 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009588 0.000000 0.002005 0.00000 SCALE2 0.000000 0.024618 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010134 0.00000