HEADER PROTEIN BINDING, CELL CYCLE 10-FEB-11 3QOR TITLE CRYSTAL STRUCTURE OF HUMAN NUCLEAR MIGRATION PROTEIN NUDC COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEAR MIGRATION PROTEIN NUDC; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 158-274; COMPND 5 SYNONYM: NUCLEAR DISTRIBUTION PROTEIN C HOMOLOG; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 OTHER_DETAILS: CYS188 IS MODIFIED TO S-OXY CYSTEINE; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: NUCLEAR MIGRATION PROTEIN NUDC; COMPND 11 CHAIN: B; COMPND 12 FRAGMENT: RESIDUES 158-274; COMPND 13 SYNONYM: NUCLEAR DISTRIBUTION PROTEIN C HOMOLOG; COMPND 14 ENGINEERED: YES; COMPND 15 MUTATION: YES; COMPND 16 OTHER_DETAILS: CYS188 IS MODIFIED TO 3-SULFINOALANINE; COMPND 17 MOL_ID: 3; COMPND 18 MOLECULE: NUCLEAR MIGRATION PROTEIN NUDC; COMPND 19 CHAIN: C; COMPND 20 FRAGMENT: RESIDUES 158-274; COMPND 21 SYNONYM: NUCLEAR DISTRIBUTION PROTEIN C HOMOLOG; COMPND 22 ENGINEERED: YES; COMPND 23 MUTATION: YES; COMPND 24 OTHER_DETAILS: CYS188 IS UNMODIFIED; COMPND 25 MOL_ID: 4; COMPND 26 MOLECULE: NUCLEAR MIGRATION PROTEIN NUDC; COMPND 27 CHAIN: D, E; COMPND 28 FRAGMENT: RESIDUES 158-274; COMPND 29 SYNONYM: NUCLEAR DISTRIBUTION PROTEIN C HOMOLOG; COMPND 30 ENGINEERED: YES; COMPND 31 MUTATION: YES; COMPND 32 OTHER_DETAILS: CYS188 IS MODIFIED TO CYSTEINESULFONIC ACID SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NUDC; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: NUDC; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_COMMON: HUMAN; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 GENE: NUDC; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 22 MOL_ID: 4; SOURCE 23 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 24 ORGANISM_COMMON: HUMAN; SOURCE 25 ORGANISM_TAXID: 9606; SOURCE 26 GENE: NUDC; SOURCE 27 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 28 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA-SANDWICH, NUCLEAR MIGRATION PROTEIN, CHAPERONE, PROTEIN BINDING, KEYWDS 2 CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR U.DEREWENDA,Z.DEREWENDA,M.ZHENG REVDAT 2 13-JUL-11 3QOR 1 JRNL REVDAT 1 27-APR-11 3QOR 0 JRNL AUTH M.ZHENG,T.CIERPICKI,A.J.BURDETTE,D.UTEPBERGENOV,P.L.JANCZYK, JRNL AUTH 2 U.DEREWENDA,P.T.STUKENBERG,K.A.CALDWELL,Z.S.DEREWENDA JRNL TITL STRUCTURAL FEATURES AND CHAPERONE ACTIVITY OF THE NUDC JRNL TITL 2 PROTEIN FAMILY. JRNL REF J.MOL.BIOL. V. 409 722 2011 JRNL REFN ISSN 0022-2836 JRNL PMID 21530541 JRNL DOI 10.1016/J.JMB.2011.04.018 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.05 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 63750 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 3227 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.0568 - 3.7732 1.00 6231 336 0.1707 0.1898 REMARK 3 2 3.7732 - 2.9960 1.00 6100 343 0.1605 0.1716 REMARK 3 3 2.9960 - 2.6176 1.00 6153 274 0.1648 0.2093 REMARK 3 4 2.6176 - 2.3784 1.00 6025 329 0.1639 0.1959 REMARK 3 5 2.3784 - 2.2080 1.00 6034 363 0.1662 0.2099 REMARK 3 6 2.2080 - 2.0779 1.00 6037 331 0.1717 0.2137 REMARK 3 7 2.0779 - 1.9739 1.00 6051 320 0.1742 0.2068 REMARK 3 8 1.9739 - 1.8880 1.00 6040 323 0.1897 0.2411 REMARK 3 9 1.8880 - 1.8153 1.00 6049 303 0.2115 0.2662 REMARK 3 10 1.8153 - 1.7527 0.97 5803 305 0.2565 0.2971 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.61 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 49.86 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.52610 REMARK 3 B22 (A**2) : -10.26320 REMARK 3 B33 (A**2) : 7.73710 REMARK 3 B12 (A**2) : -0.00000 REMARK 3 B13 (A**2) : 0.29610 REMARK 3 B23 (A**2) : -0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4998 REMARK 3 ANGLE : 1.031 6818 REMARK 3 CHIRALITY : 0.071 763 REMARK 3 PLANARITY : 0.004 875 REMARK 3 DIHEDRAL : 12.934 1955 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3QOR COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-FEB-11. REMARK 100 THE RCSB ID CODE IS RCSB063912. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAY-05 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97928 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 300 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63750 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 28.050 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 3350, 0.2M SODIUM ACETATE, REMARK 280 0.1M LITHIUM SULFATE, PH 4.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 25.91000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 274 REMARK 465 GLY B 154 REMARK 465 SER B 274 REMARK 465 GLY C 154 REMARK 465 SER C 155 REMARK 465 SER C 156 REMARK 465 SER C 274 REMARK 465 GLY D 154 REMARK 465 SER D 155 REMARK 465 SER D 156 REMARK 465 SER D 274 REMARK 465 GLY E 154 REMARK 465 SER E 155 REMARK 465 SER E 156 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN C 273 CG OD1 REMARK 470 SER E 157 CB OG REMARK 470 LYS E 158 CG CD CE NZ REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 OCS D 188 OD1 OD2 OD3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 3 O HOH A 4 1.83 REMARK 500 O HOH B 821 O HOH B 847 1.95 REMARK 500 O HOH D 817 O HOH D 818 1.98 REMARK 500 O HOH C 333 O HOH D 674 2.02 REMARK 500 O HOH A 113 O HOH A 114 2.03 REMARK 500 O HOH C 298 O HOH C 691 2.04 REMARK 500 O HOH A 575 O HOH A 838 2.07 REMARK 500 O HOH A 624 O HOH B 862 2.08 REMARK 500 OE1 GLU D 225 O HOH D 402 2.10 REMARK 500 OD1 OCS E 188 O HOH E 857 2.10 REMARK 500 O HOH A 87 O HOH A 570 2.11 REMARK 500 O HOH C 281 O HOH C 637 2.13 REMARK 500 O HOH B 307 O HOH B 868 2.16 REMARK 500 O HOH D 459 O HOH D 467 2.17 REMARK 500 O HOH D 720 O HOH D 722 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 219 88.00 -159.32 REMARK 500 ASN B 190 40.29 -93.64 REMARK 500 ASP B 219 83.54 -162.66 REMARK 500 ASP C 219 84.91 -158.20 REMARK 500 ARG D 205 28.26 -141.44 REMARK 500 ASP D 219 81.49 -162.98 REMARK 500 ARG E 205 36.31 -142.18 REMARK 500 ASP E 219 86.88 -167.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 775 DISTANCE = 5.26 ANGSTROMS REMARK 525 HOH B 774 DISTANCE = 5.29 ANGSTROMS REMARK 525 HOH C 830 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH C 840 DISTANCE = 5.25 ANGSTROMS REMARK 525 HOH C 853 DISTANCE = 5.18 ANGSTROMS REMARK 525 HOH C 854 DISTANCE = 5.56 ANGSTROMS REMARK 525 HOH C 858 DISTANCE = 6.05 ANGSTROMS REMARK 525 HOH C 861 DISTANCE = 5.47 ANGSTROMS REMARK 525 HOH C 867 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH D 787 DISTANCE = 6.26 ANGSTROMS REMARK 525 HOH D 876 DISTANCE = 5.53 ANGSTROMS REMARK 525 HOH E 829 DISTANCE = 5.52 ANGSTROMS REMARK 525 HOH E 839 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH E 860 DISTANCE = 5.88 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 301 DBREF 3QOR A 158 274 UNP Q9Y266 NUDC_HUMAN 158 274 DBREF 3QOR B 158 274 UNP Q9Y266 NUDC_HUMAN 158 274 DBREF 3QOR C 158 274 UNP Q9Y266 NUDC_HUMAN 158 274 DBREF 3QOR D 158 274 UNP Q9Y266 NUDC_HUMAN 158 274 DBREF 3QOR E 158 274 UNP Q9Y266 NUDC_HUMAN 158 274 SEQADV 3QOR GLY A 154 UNP Q9Y266 EXPRESSION TAG SEQADV 3QOR SER A 155 UNP Q9Y266 EXPRESSION TAG SEQADV 3QOR SER A 156 UNP Q9Y266 EXPRESSION TAG SEQADV 3QOR SER A 157 UNP Q9Y266 EXPRESSION TAG SEQADV 3QOR ALA A 236 UNP Q9Y266 GLU 236 ENGINEERED MUTATION SEQADV 3QOR ALA A 239 UNP Q9Y266 LYS 239 ENGINEERED MUTATION SEQADV 3QOR GLY B 154 UNP Q9Y266 EXPRESSION TAG SEQADV 3QOR SER B 155 UNP Q9Y266 EXPRESSION TAG SEQADV 3QOR SER B 156 UNP Q9Y266 EXPRESSION TAG SEQADV 3QOR SER B 157 UNP Q9Y266 EXPRESSION TAG SEQADV 3QOR ALA B 236 UNP Q9Y266 GLU 236 ENGINEERED MUTATION SEQADV 3QOR ALA B 239 UNP Q9Y266 LYS 239 ENGINEERED MUTATION SEQADV 3QOR GLY C 154 UNP Q9Y266 EXPRESSION TAG SEQADV 3QOR SER C 155 UNP Q9Y266 EXPRESSION TAG SEQADV 3QOR SER C 156 UNP Q9Y266 EXPRESSION TAG SEQADV 3QOR SER C 157 UNP Q9Y266 EXPRESSION TAG SEQADV 3QOR ALA C 236 UNP Q9Y266 GLU 236 ENGINEERED MUTATION SEQADV 3QOR ALA C 239 UNP Q9Y266 LYS 239 ENGINEERED MUTATION SEQADV 3QOR GLY D 154 UNP Q9Y266 EXPRESSION TAG SEQADV 3QOR SER D 155 UNP Q9Y266 EXPRESSION TAG SEQADV 3QOR SER D 156 UNP Q9Y266 EXPRESSION TAG SEQADV 3QOR SER D 157 UNP Q9Y266 EXPRESSION TAG SEQADV 3QOR ALA D 236 UNP Q9Y266 GLU 236 ENGINEERED MUTATION SEQADV 3QOR ALA D 239 UNP Q9Y266 LYS 239 ENGINEERED MUTATION SEQADV 3QOR GLY E 154 UNP Q9Y266 EXPRESSION TAG SEQADV 3QOR SER E 155 UNP Q9Y266 EXPRESSION TAG SEQADV 3QOR SER E 156 UNP Q9Y266 EXPRESSION TAG SEQADV 3QOR SER E 157 UNP Q9Y266 EXPRESSION TAG SEQADV 3QOR ALA E 236 UNP Q9Y266 GLU 236 ENGINEERED MUTATION SEQADV 3QOR ALA E 239 UNP Q9Y266 LYS 239 ENGINEERED MUTATION SEQRES 1 A 121 GLY SER SER SER LYS LEU LYS PRO ASN LEU GLY ASN GLY SEQRES 2 A 121 ALA ASP LEU PRO ASN TYR ARG TRP THR GLN THR LEU SER SEQRES 3 A 121 GLU LEU ASP LEU ALA VAL PRO PHE CSX VAL ASN PHE ARG SEQRES 4 A 121 LEU LYS GLY LYS ASP MET VAL VAL ASP ILE GLN ARG ARG SEQRES 5 A 121 HIS LEU ARG VAL GLY LEU LYS GLY GLN PRO ALA ILE ILE SEQRES 6 A 121 ASP GLY GLU LEU TYR ASN GLU VAL LYS VAL GLU GLU SER SEQRES 7 A 121 SER TRP LEU ILE ALA ASP GLY ALA VAL VAL THR VAL HIS SEQRES 8 A 121 LEU GLU LYS ILE ASN LYS MET GLU TRP TRP SER ARG LEU SEQRES 9 A 121 VAL SER SER ASP PRO GLU ILE ASN THR LYS LYS ILE ASN SEQRES 10 A 121 PRO GLU ASN SER SEQRES 1 B 121 GLY SER SER SER LYS LEU LYS PRO ASN LEU GLY ASN GLY SEQRES 2 B 121 ALA ASP LEU PRO ASN TYR ARG TRP THR GLN THR LEU SER SEQRES 3 B 121 GLU LEU ASP LEU ALA VAL PRO PHE CSD VAL ASN PHE ARG SEQRES 4 B 121 LEU LYS GLY LYS ASP MET VAL VAL ASP ILE GLN ARG ARG SEQRES 5 B 121 HIS LEU ARG VAL GLY LEU LYS GLY GLN PRO ALA ILE ILE SEQRES 6 B 121 ASP GLY GLU LEU TYR ASN GLU VAL LYS VAL GLU GLU SER SEQRES 7 B 121 SER TRP LEU ILE ALA ASP GLY ALA VAL VAL THR VAL HIS SEQRES 8 B 121 LEU GLU LYS ILE ASN LYS MET GLU TRP TRP SER ARG LEU SEQRES 9 B 121 VAL SER SER ASP PRO GLU ILE ASN THR LYS LYS ILE ASN SEQRES 10 B 121 PRO GLU ASN SER SEQRES 1 C 121 GLY SER SER SER LYS LEU LYS PRO ASN LEU GLY ASN GLY SEQRES 2 C 121 ALA ASP LEU PRO ASN TYR ARG TRP THR GLN THR LEU SER SEQRES 3 C 121 GLU LEU ASP LEU ALA VAL PRO PHE CYS VAL ASN PHE ARG SEQRES 4 C 121 LEU LYS GLY LYS ASP MET VAL VAL ASP ILE GLN ARG ARG SEQRES 5 C 121 HIS LEU ARG VAL GLY LEU LYS GLY GLN PRO ALA ILE ILE SEQRES 6 C 121 ASP GLY GLU LEU TYR ASN GLU VAL LYS VAL GLU GLU SER SEQRES 7 C 121 SER TRP LEU ILE ALA ASP GLY ALA VAL VAL THR VAL HIS SEQRES 8 C 121 LEU GLU LYS ILE ASN LYS MET GLU TRP TRP SER ARG LEU SEQRES 9 C 121 VAL SER SER ASP PRO GLU ILE ASN THR LYS LYS ILE ASN SEQRES 10 C 121 PRO GLU ASN SER SEQRES 1 D 121 GLY SER SER SER LYS LEU LYS PRO ASN LEU GLY ASN GLY SEQRES 2 D 121 ALA ASP LEU PRO ASN TYR ARG TRP THR GLN THR LEU SER SEQRES 3 D 121 GLU LEU ASP LEU ALA VAL PRO PHE OCS VAL ASN PHE ARG SEQRES 4 D 121 LEU LYS GLY LYS ASP MET VAL VAL ASP ILE GLN ARG ARG SEQRES 5 D 121 HIS LEU ARG VAL GLY LEU LYS GLY GLN PRO ALA ILE ILE SEQRES 6 D 121 ASP GLY GLU LEU TYR ASN GLU VAL LYS VAL GLU GLU SER SEQRES 7 D 121 SER TRP LEU ILE ALA ASP GLY ALA VAL VAL THR VAL HIS SEQRES 8 D 121 LEU GLU LYS ILE ASN LYS MET GLU TRP TRP SER ARG LEU SEQRES 9 D 121 VAL SER SER ASP PRO GLU ILE ASN THR LYS LYS ILE ASN SEQRES 10 D 121 PRO GLU ASN SER SEQRES 1 E 121 GLY SER SER SER LYS LEU LYS PRO ASN LEU GLY ASN GLY SEQRES 2 E 121 ALA ASP LEU PRO ASN TYR ARG TRP THR GLN THR LEU SER SEQRES 3 E 121 GLU LEU ASP LEU ALA VAL PRO PHE OCS VAL ASN PHE ARG SEQRES 4 E 121 LEU LYS GLY LYS ASP MET VAL VAL ASP ILE GLN ARG ARG SEQRES 5 E 121 HIS LEU ARG VAL GLY LEU LYS GLY GLN PRO ALA ILE ILE SEQRES 6 E 121 ASP GLY GLU LEU TYR ASN GLU VAL LYS VAL GLU GLU SER SEQRES 7 E 121 SER TRP LEU ILE ALA ASP GLY ALA VAL VAL THR VAL HIS SEQRES 8 E 121 LEU GLU LYS ILE ASN LYS MET GLU TRP TRP SER ARG LEU SEQRES 9 E 121 VAL SER SER ASP PRO GLU ILE ASN THR LYS LYS ILE ASN SEQRES 10 E 121 PRO GLU ASN SER MODRES 3QOR CSX A 188 CYS S-OXY CYSTEINE MODRES 3QOR CSD B 188 CYS 3-SULFINOALANINE MODRES 3QOR OCS D 188 CYS CYSTEINESULFONIC ACID MODRES 3QOR OCS E 188 CYS CYSTEINESULFONIC ACID HET CSX A 188 7 HET CSD B 188 8 HET OCS D 188 13 HET OCS E 188 9 HET ACT A 301 4 HETNAM CSX S-OXY CYSTEINE HETNAM CSD 3-SULFINOALANINE HETNAM OCS CYSTEINESULFONIC ACID HETNAM ACT ACETATE ION HETSYN CSD S-CYSTEINESULFINIC ACID; S-SULFINOCYSTEINE FORMUL 1 CSX C3 H7 N O3 S FORMUL 2 CSD C3 H7 N O4 S FORMUL 4 OCS 2(C3 H7 N O5 S) FORMUL 6 ACT C2 H3 O2 1- FORMUL 7 HOH *877(H2 O) HELIX 1 1 LYS A 194 LYS A 196 5 3 HELIX 2 2 LYS A 227 SER A 231 5 5 HELIX 3 3 ASN A 265 ILE A 269 5 5 HELIX 4 4 LYS B 194 LYS B 196 5 3 HELIX 5 5 LYS B 227 SER B 231 5 5 HELIX 6 6 ASN B 265 ILE B 269 5 5 HELIX 7 7 LYS C 194 LYS C 196 5 3 HELIX 8 8 LYS C 227 GLU C 230 5 4 HELIX 9 9 ASN C 265 ILE C 269 5 5 HELIX 10 10 LYS D 194 LYS D 196 5 3 HELIX 11 11 LYS D 227 SER D 231 5 5 HELIX 12 12 ASN D 265 ILE D 269 5 5 HELIX 13 13 LYS E 194 LYS E 196 5 3 HELIX 14 14 LYS E 227 SER E 231 5 5 HELIX 15 15 ASN E 265 ILE E 269 5 5 HELIX 16 16 ASN E 270 SER E 274 5 5 SHEET 1 A 4 ARG A 173 GLN A 176 0 SHEET 2 A 4 GLU A 180 PRO A 186 -1 O ALA A 184 N ARG A 173 SHEET 3 A 4 VAL A 240 GLU A 246 -1 O VAL A 241 N VAL A 185 SHEET 4 A 4 SER A 232 ALA A 236 -1 N SER A 232 O HIS A 244 SHEET 1 B 3 MET A 198 GLN A 203 0 SHEET 2 B 3 HIS A 206 LEU A 211 -1 O HIS A 206 N GLN A 203 SHEET 3 B 3 ILE A 218 GLU A 221 -1 O ILE A 218 N VAL A 209 SHEET 1 C 4 ARG B 173 GLN B 176 0 SHEET 2 C 4 GLU B 180 PRO B 186 -1 O ALA B 184 N ARG B 173 SHEET 3 C 4 VAL B 240 GLU B 246 -1 O VAL B 241 N VAL B 185 SHEET 4 C 4 SER B 232 ALA B 236 -1 N SER B 232 O HIS B 244 SHEET 1 D 3 MET B 198 GLN B 203 0 SHEET 2 D 3 HIS B 206 LEU B 211 -1 O GLY B 210 N VAL B 199 SHEET 3 D 3 ILE B 218 GLU B 221 -1 O ILE B 218 N VAL B 209 SHEET 1 E 9 ARG C 173 GLN C 176 0 SHEET 2 E 9 GLU C 180 PRO C 186 -1 O ALA C 184 N ARG C 173 SHEET 3 E 9 VAL C 240 GLU C 246 -1 O VAL C 243 N LEU C 183 SHEET 4 E 9 SER C 232 ALA C 236 -1 N ALA C 236 O VAL C 240 SHEET 5 E 9 SER E 232 ALA E 236 1 O ILE E 235 N TRP C 233 SHEET 6 E 9 VAL E 240 GLU E 246 -1 O VAL E 240 N ALA E 236 SHEET 7 E 9 GLU E 180 PRO E 186 -1 N LEU E 183 O VAL E 243 SHEET 8 E 9 ARG E 173 GLN E 176 -1 N THR E 175 O ASP E 182 SHEET 9 E 9 ALA E 167 ASP E 168 -1 N ALA E 167 O TRP E 174 SHEET 1 F 3 MET C 198 GLN C 203 0 SHEET 2 F 3 HIS C 206 LEU C 211 -1 O HIS C 206 N GLN C 203 SHEET 3 F 3 ILE C 218 GLU C 221 -1 O ILE C 218 N VAL C 209 SHEET 1 G 4 ARG D 173 GLN D 176 0 SHEET 2 G 4 GLU D 180 PRO D 186 -1 O ALA D 184 N ARG D 173 SHEET 3 G 4 VAL D 240 GLU D 246 -1 O LEU D 245 N LEU D 181 SHEET 4 G 4 SER D 232 ALA D 236 -1 N SER D 232 O HIS D 244 SHEET 1 H 3 MET D 198 GLN D 203 0 SHEET 2 H 3 HIS D 206 LEU D 211 -1 O GLY D 210 N VAL D 199 SHEET 3 H 3 ILE D 218 GLU D 221 -1 O ILE D 218 N VAL D 209 SHEET 1 I 3 MET E 198 GLN E 203 0 SHEET 2 I 3 HIS E 206 LEU E 211 -1 O HIS E 206 N GLN E 203 SHEET 3 I 3 ILE E 218 GLU E 221 -1 O GLY E 220 N LEU E 207 LINK C PHE A 187 N CSX A 188 1555 1555 1.33 LINK C CSX A 188 N VAL A 189 1555 1555 1.33 LINK C PHE B 187 N CSD B 188 1555 1555 1.33 LINK C CSD B 188 N VAL B 189 1555 1555 1.33 LINK C PHE D 187 N OCS D 188 1555 1555 1.32 LINK C OCS D 188 N VAL D 189 1555 1555 1.33 LINK C PHE E 187 N OCS E 188 1555 1555 1.33 LINK C OCS E 188 N VAL E 189 1555 1555 1.33 CISPEP 1 GLU C 272 ASN C 273 0 -0.35 SITE 1 AC1 3 ARG A 204 LYS A 227 HOH C 629 CRYST1 66.734 51.820 92.854 90.00 90.58 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014985 0.000000 0.000151 0.00000 SCALE2 0.000000 0.019298 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010770 0.00000