HEADER VIRAL PROTEIN 15-FEB-11 3QQE TITLE CRYSTAL STRUCTURE OF HA2 R106H MUTANT OF H2 HEMAGGLUTININ, RE- TITLE 2 NEUTRALIZED FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMAGGLUTININ; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: HA1 CHAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: HEMAGGLUTININ; COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: HA2 CHAIN ECTODOMAIN; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 3 ORGANISM_TAXID: 387161; SOURCE 4 STRAIN: A/JAPAN/305/1957 H2N2; SOURCE 5 GENE: HA, HEMAGGLUTININ; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HI5; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFASTBAC-HT; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 13 ORGANISM_TAXID: 387161; SOURCE 14 STRAIN: A/JAPAN/305/1957 H2N2; SOURCE 15 GENE: HA, HEMAGGLUTININ; SOURCE 16 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: HI5; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PFASTBAC-HT KEYWDS VIRAL ENVELOPE PROTEIN, HEMAGGLUTININ, VIRAL FUSION PROTEIN, VIRAL KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.XU,I.A.WILSON REVDAT 5 29-JUL-20 3QQE 1 COMPND REMARK SEQADV HETNAM REVDAT 5 2 1 LINK SITE ATOM REVDAT 4 08-NOV-17 3QQE 1 REMARK REVDAT 3 04-MAY-11 3QQE 1 JRNL REVDAT 2 16-MAR-11 3QQE 1 JRNL REVDAT 1 09-MAR-11 3QQE 0 JRNL AUTH R.XU,I.A.WILSON JRNL TITL STRUCTURAL CHARACTERIZATION OF AN EARLY FUSION INTERMEDIATE JRNL TITL 2 OF INFLUENZA VIRUS HEMAGGLUTININ. JRNL REF J.VIROL. V. 85 5172 2011 JRNL REFN ISSN 0022-538X JRNL PMID 21367895 JRNL DOI 10.1128/JVI.02430-10 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 37441 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1874 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.16 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2112 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 79.01 REMARK 3 BIN R VALUE (WORKING SET) : 0.2810 REMARK 3 BIN FREE R VALUE SET COUNT : 109 REMARK 3 BIN FREE R VALUE : 0.4170 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3921 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 67 REMARK 3 SOLVENT ATOMS : 426 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.77000 REMARK 3 B22 (A**2) : 0.77000 REMARK 3 B33 (A**2) : -1.15000 REMARK 3 B12 (A**2) : 0.38000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.179 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.138 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.885 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4084 ; 0.011 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5525 ; 1.337 ; 1.961 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 493 ; 6.079 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 197 ;35.596 ;25.178 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 697 ;14.500 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;14.124 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 593 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3086 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1712 ; 0.181 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2715 ; 0.301 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 362 ; 0.161 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 70 ; 0.170 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 23 ; 0.234 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2532 ; 0.773 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3945 ; 1.301 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1787 ; 1.922 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1580 ; 3.130 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 326 REMARK 3 ORIGIN FOR THE GROUP (A): 15.9128 -14.0726 -35.7974 REMARK 3 T TENSOR REMARK 3 T11: -0.0953 T22: -0.0909 REMARK 3 T33: 0.0037 T12: 0.0075 REMARK 3 T13: -0.0235 T23: -0.0197 REMARK 3 L TENSOR REMARK 3 L11: 0.3973 L22: 0.1974 REMARK 3 L33: 1.8641 L12: 0.0791 REMARK 3 L13: -0.0251 L23: -0.1858 REMARK 3 S TENSOR REMARK 3 S11: -0.0564 S12: -0.0585 S13: 0.0594 REMARK 3 S21: -0.0090 S22: 0.0053 S23: -0.0032 REMARK 3 S31: 0.0449 S32: -0.0884 S33: 0.0511 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 172 REMARK 3 ORIGIN FOR THE GROUP (A): 23.9719 -15.9278 16.5619 REMARK 3 T TENSOR REMARK 3 T11: -0.0571 T22: 0.0425 REMARK 3 T33: -0.1003 T12: 0.0054 REMARK 3 T13: -0.0008 T23: -0.0092 REMARK 3 L TENSOR REMARK 3 L11: 0.1407 L22: 0.5602 REMARK 3 L33: 9.2359 L12: -0.2742 REMARK 3 L13: -0.8278 L23: 1.2770 REMARK 3 S TENSOR REMARK 3 S11: -0.0537 S12: 0.0118 S13: 0.0034 REMARK 3 S21: 0.0661 S22: -0.0426 S23: 0.0439 REMARK 3 S31: -0.3664 S32: -0.4467 S33: 0.0963 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3QQE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-FEB-11. REMARK 100 THE DEPOSITION ID IS D_1000063971. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-MAR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37509 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 7.800 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.51400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 1.3.3 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24% PEG 3000, 0.1M TRIS, PH 9.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 295.5K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 118.54650 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 118.54650 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 118.54650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 31720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 62620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -126.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 35.16950 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -60.91536 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 70.33900 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 365 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 434 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 326 REMARK 465 GLU A 327 REMARK 465 SER A 328 REMARK 465 ARG A 329 REMARK 465 ILE B 173 REMARK 465 LYS B 174 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 308 O HOH A 618 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 33 48.08 71.22 REMARK 500 PHE A 148 126.13 -37.59 REMARK 500 ASN A 170 88.76 -67.92 REMARK 500 GLN A 196 -48.06 61.15 REMARK 500 THR A 206 -166.41 -119.57 REMARK 500 TRP A 240 -1.67 71.14 REMARK 500 ASN A 250 2.53 84.55 REMARK 500 SER A 265 -150.16 -146.93 REMARK 500 PRO A 324 134.46 -27.35 REMARK 500 MET B 59 58.21 -106.54 REMARK 500 THR B 61 61.68 -110.85 REMARK 500 ARG B 127 -132.16 54.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3QQB RELATED DB: PDB REMARK 900 RELATED ID: 3QQI RELATED DB: PDB REMARK 900 RELATED ID: 3QQO RELATED DB: PDB DBREF 3QQE A 10 329 UNP C7S226 C7S226_I57A0 15 340 DBREF 3QQE B 1 174 UNP C7S226 C7S226_I57A0 341 514 SEQADV 3QQE PRO A 9 UNP C7S226 EXPRESSION TAG SEQADV 3QQE HIS B 106 UNP C7S226 ARG 446 ENGINEERED MUTATION SEQRES 1 A 327 PRO GLY ASP GLN ILE CYS ILE GLY TYR HIS ALA ASN ASN SEQRES 2 A 327 SER THR GLU LYS VAL ASP THR ILE LEU GLU ARG ASN VAL SEQRES 3 A 327 THR VAL THR HIS ALA LYS ASP ILE LEU GLU LYS THR HIS SEQRES 4 A 327 ASN GLY LYS LEU CYS LYS LEU ASN GLY ILE PRO PRO LEU SEQRES 5 A 327 GLU LEU GLY ASP CYS SER ILE ALA GLY TRP LEU LEU GLY SEQRES 6 A 327 ASN PRO GLU CYS ASP ARG LEU LEU SER VAL PRO GLU TRP SEQRES 7 A 327 SER TYR ILE MET GLU LYS GLU ASN PRO ARG ASP GLY LEU SEQRES 8 A 327 CYS TYR PRO GLY SER PHE ASN ASP TYR GLU GLU LEU LYS SEQRES 9 A 327 HIS LEU LEU SER SER VAL LYS HIS PHE GLU LYS VAL LYS SEQRES 10 A 327 ILE LEU PRO LYS ASP ARG TRP THR GLN HIS THR THR THR SEQRES 11 A 327 GLY GLY SER ARG ALA CYS ALA VAL SER GLY ASN PRO SER SEQRES 12 A 327 PHE PHE ARG ASN MET VAL TRP LEU THR GLU LYS GLY SER SEQRES 13 A 327 ASN TYR PRO VAL ALA LYS GLY SER TYR ASN ASN THR SER SEQRES 14 A 327 GLY GLU GLN MET LEU ILE ILE TRP GLY VAL HIS HIS PRO SEQRES 15 A 327 ASN ASP GLU THR GLU GLN ARG THR LEU TYR GLN ASN VAL SEQRES 16 A 327 GLY THR TYR VAL SER VAL GLY THR SER THR LEU ASN LYS SEQRES 17 A 327 ARG SER THR PRO GLU ILE ALA THR ARG PRO LYS VAL ASN SEQRES 18 A 327 GLY GLN GLY GLY ARG MET GLU PHE SER TRP THR LEU LEU SEQRES 19 A 327 ASP MET TRP ASP THR ILE ASN PHE GLU SER THR GLY ASN SEQRES 20 A 327 LEU ILE ALA PRO GLU TYR GLY PHE LYS ILE SER LYS ARG SEQRES 21 A 327 GLY SER SER GLY ILE MET LYS THR GLU GLY THR LEU GLU SEQRES 22 A 327 ASN CYS GLU THR LYS CYS GLN THR PRO LEU GLY ALA ILE SEQRES 23 A 327 ASN THR THR LEU PRO PHE HIS ASN VAL HIS PRO LEU THR SEQRES 24 A 327 ILE GLY GLU CYS PRO LYS TYR VAL LYS SER GLU LYS LEU SEQRES 25 A 327 VAL LEU ALA THR GLY LEU ARG ASN VAL PRO GLN ILE GLU SEQRES 26 A 327 SER ARG SEQRES 1 B 174 GLY LEU PHE GLY ALA ILE ALA GLY PHE ILE GLU GLY GLY SEQRES 2 B 174 TRP GLN GLY MET VAL ASP GLY TRP TYR GLY TYR HIS HIS SEQRES 3 B 174 SER ASN ASP GLN GLY SER GLY TYR ALA ALA ASP LYS GLU SEQRES 4 B 174 SER THR GLN LYS ALA PHE ASP GLY ILE THR ASN LYS VAL SEQRES 5 B 174 ASN SER VAL ILE GLU LYS MET ASN THR GLN PHE GLU ALA SEQRES 6 B 174 VAL GLY LYS GLU PHE SER ASN LEU GLU ARG ARG LEU GLU SEQRES 7 B 174 ASN LEU ASN LYS LYS MET GLU ASP GLY PHE LEU ASP VAL SEQRES 8 B 174 TRP THR TYR ASN ALA GLU LEU LEU VAL LEU MET GLU ASN SEQRES 9 B 174 GLU HIS THR LEU ASP PHE HIS ASP SER ASN VAL LYS ASN SEQRES 10 B 174 LEU TYR ASP LYS VAL ARG MET GLN LEU ARG ASP ASN VAL SEQRES 11 B 174 LYS GLU LEU GLY ASN GLY CYS PHE GLU PHE TYR HIS LYS SEQRES 12 B 174 CYS ASP ASP GLU CYS MET ASN SER VAL LYS ASN GLY THR SEQRES 13 B 174 TYR ASP TYR PRO LYS TYR GLU GLU GLU SER LYS LEU ASN SEQRES 14 B 174 ARG ASN GLU ILE LYS MODRES 3QQE ASN A 33 ASN GLYCOSYLATION SITE MODRES 3QQE ASN A 169 ASN GLYCOSYLATION SITE MODRES 3QQE ASN B 154 ASN GLYCOSYLATION SITE HET NAG C 1 14 HET NAG C 2 14 HET NAG A 332 14 HET EDO A 1 4 HET NAG B 175 14 HET PEG B 176 7 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN EDO ETHYLENE GLYCOL FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 5 EDO C2 H6 O2 FORMUL 7 PEG C4 H10 O3 FORMUL 8 HOH *426(H2 O) HELIX 1 1 SER A 65 GLY A 72 1 8 HELIX 2 2 ASN A 73 LEU A 80 5 8 HELIX 3 3 ASP A 104 SER A 113 1 10 HELIX 4 4 PRO A 122 TRP A 127 5 5 HELIX 5 5 ASP A 187 GLN A 196 1 10 HELIX 6 6 ASP B 37 MET B 59 1 23 HELIX 7 7 GLU B 74 ARG B 127 1 54 HELIX 8 8 ASP B 145 ASN B 154 1 10 HELIX 9 9 ASP B 158 GLU B 172 1 15 SHEET 1 A 5 GLY B 31 ALA B 36 0 SHEET 2 A 5 TYR B 22 ASN B 28 -1 N TYR B 24 O ALA B 35 SHEET 3 A 5 GLN A 12 TYR A 17 -1 N GLN A 12 O SER B 27 SHEET 4 A 5 CYS B 137 PHE B 140 -1 O PHE B 138 N ILE A 13 SHEET 5 A 5 VAL B 130 GLU B 132 -1 N LYS B 131 O GLU B 139 SHEET 1 B 2 LYS A 25 VAL A 26 0 SHEET 2 B 2 VAL A 34 THR A 35 -1 O VAL A 34 N VAL A 26 SHEET 1 C 2 ALA A 39 ASP A 41 0 SHEET 2 C 2 VAL A 315 ALA A 317 -1 O LEU A 316 N LYS A 40 SHEET 1 D 3 LEU A 43 GLU A 44 0 SHEET 2 D 3 PHE A 294 HIS A 295 1 O PHE A 294 N GLU A 44 SHEET 3 D 3 LYS A 307 TYR A 308 1 O LYS A 307 N HIS A 295 SHEET 1 E 2 LEU A 51 LEU A 53A 0 SHEET 2 E 2 LEU A 274 THR A 279 1 O GLU A 275 N LEU A 51 SHEET 1 F 3 LEU A 59 GLU A 60 0 SHEET 2 F 3 ILE A 87 GLU A 89 1 O MET A 88 N LEU A 59 SHEET 3 F 3 ILE A 267 LYS A 269 1 O MET A 268 N ILE A 87 SHEET 1 G 5 GLY A 100 PHE A 102 0 SHEET 2 G 5 ARG A 229 LEU A 237 1 O PHE A 232 N SER A 101 SHEET 3 G 5 MET A 176 HIS A 184 -1 N HIS A 184 O ARG A 229 SHEET 4 G 5 TYR A 256 ARG A 263 -1 O PHE A 258 N LEU A 177 SHEET 5 G 5 VAL A 115 LYS A 119 -1 N LYS A 116 O LYS A 262 SHEET 1 H 5 GLY A 100 PHE A 102 0 SHEET 2 H 5 ARG A 229 LEU A 237 1 O PHE A 232 N SER A 101 SHEET 3 H 5 MET A 176 HIS A 184 -1 N HIS A 184 O ARG A 229 SHEET 4 H 5 LEU A 251 PRO A 254 -1 O ILE A 252 N GLY A 181 SHEET 5 H 5 MET A 151 TRP A 153 -1 N VAL A 152 O ALA A 253 SHEET 1 I 2 SER A 136 VAL A 141 0 SHEET 2 I 2 ASN A 144 SER A 146 -1 O SER A 146 N SER A 136 SHEET 1 J 4 ALA A 164 ASN A 169 0 SHEET 2 J 4 THR A 242 SER A 247 -1 O SER A 247 N ALA A 164 SHEET 3 J 4 VAL A 202 GLY A 205 -1 N SER A 203 O GLU A 246 SHEET 4 J 4 ASN A 210 SER A 213 -1 O LYS A 211 N VAL A 204 SHEET 1 K 3 GLY A 286 ILE A 288 0 SHEET 2 K 3 CYS A 281 THR A 283 -1 N CYS A 281 O ILE A 288 SHEET 3 K 3 ILE A 302 GLY A 303 -1 O ILE A 302 N GLN A 282 SSBOND 1 CYS A 14 CYS B 137 1555 1555 2.08 SSBOND 2 CYS A 52 CYS A 277 1555 1555 2.08 SSBOND 3 CYS A 64 CYS A 76 1555 1555 2.09 SSBOND 4 CYS A 281 CYS A 305 1555 1555 2.08 SSBOND 5 CYS B 144 CYS B 148 1555 1555 2.09 LINK ND2 ASN A 33 C1 NAG A 332 1555 1555 1.45 LINK ND2 ASN A 169 C1 NAG C 1 1555 1555 1.46 LINK ND2 ASN B 154 C1 NAG B 175 1555 1555 1.46 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.45 CRYST1 70.339 70.339 237.093 90.00 90.00 120.00 P 63 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014217 0.008208 0.000000 0.00000 SCALE2 0.000000 0.016416 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004218 0.00000