data_3QRQ # _entry.id 3QRQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3QRQ pdb_00003qrq 10.2210/pdb3qrq/pdb NDB NA0975 ? ? RCSB RCSB064019 ? ? WWPDB D_1000064019 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-05-25 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2018-01-24 4 'Structure model' 1 3 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Structure summary' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' audit_author 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_audit_author.name' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.entry_id 3QRQ _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-02-18 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3QRP . unspecified PDB 3QRR . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Schellenberg, M.J.' 1 'Gesner, E.G.' 2 'Garside, E.L.' 3 'MacMillan, A.M.' 4 # _citation.id primary _citation.title 'Recognition and maturation of effector RNAs in a CRISPR interference pathway.' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 18 _citation.page_first 688 _citation.page_last 692 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21572444 _citation.pdbx_database_id_DOI 10.1038/nsmb.2042 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gesner, E.M.' 1 ? primary 'Schellenberg, M.J.' 2 ? primary 'Garside, E.L.' 3 ? primary 'George, M.M.' 4 ? primary 'Macmillan, A.M.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative uncharacterized protein TTHB192' 30002.508 1 ? ? ? ? 2 polymer syn ;RNA (5'-R(*GP*UP*CP*CP*CP*CP*AP*CP*GP*CP*GP*UP*GP*UP*GP*GP*GP*GP*A)-3') ; 6108.690 1 ? ? ? 'CRISPR RNA' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MHHHHHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKAMADIGSENLYFQMWLTKLVLNPASRAARRDLANPYE MHRTLSKAVSRALEEGRERLLWRLEPARGLEPPVVLVQTLTEPDWSVLDEGYAQVFPPKPFHPALKPGQRLRFRLRANPA KRLAATGKRVALKTPAEKVAWLERRLEEGGFRLLEGERGPWVQILQDTFLEVRRKKDGEEAGKLLQVQAVLFEGRLEVVD PERALATLRRGVGPGKALGLGLLSVAP ; ;MHHHHHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKAMADIGSENLYFQMWLTKLVLNPASRAARRDLANPYE MHRTLSKAVSRALEEGRERLLWRLEPARGLEPPVVLVQTLTEPDWSVLDEGYAQVFPPKPFHPALKPGQRLRFRLRANPA KRLAATGKRVALKTPAEKVAWLERRLEEGGFRLLEGERGPWVQILQDTFLEVRRKKDGEEAGKLLQVQAVLFEGRLEVVD PERALATLRRGVGPGKALGLGLLSVAP ; A ? 2 'polydeoxyribonucleotide/polyribonucleotide hybrid' no no 'GUCCCCACGCGUGUGGG(DG)A' GUCCCCACGCGUGUGGGGA B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 SER n 1 9 SER n 1 10 GLY n 1 11 LEU n 1 12 VAL n 1 13 PRO n 1 14 ARG n 1 15 GLY n 1 16 SER n 1 17 GLY n 1 18 MET n 1 19 LYS n 1 20 GLU n 1 21 THR n 1 22 ALA n 1 23 ALA n 1 24 ALA n 1 25 LYS n 1 26 PHE n 1 27 GLU n 1 28 ARG n 1 29 GLN n 1 30 HIS n 1 31 MET n 1 32 ASP n 1 33 SER n 1 34 PRO n 1 35 ASP n 1 36 LEU n 1 37 GLY n 1 38 THR n 1 39 ASP n 1 40 ASP n 1 41 ASP n 1 42 ASP n 1 43 LYS n 1 44 ALA n 1 45 MET n 1 46 ALA n 1 47 ASP n 1 48 ILE n 1 49 GLY n 1 50 SER n 1 51 GLU n 1 52 ASN n 1 53 LEU n 1 54 TYR n 1 55 PHE n 1 56 GLN n 1 57 MET n 1 58 TRP n 1 59 LEU n 1 60 THR n 1 61 LYS n 1 62 LEU n 1 63 VAL n 1 64 LEU n 1 65 ASN n 1 66 PRO n 1 67 ALA n 1 68 SER n 1 69 ARG n 1 70 ALA n 1 71 ALA n 1 72 ARG n 1 73 ARG n 1 74 ASP n 1 75 LEU n 1 76 ALA n 1 77 ASN n 1 78 PRO n 1 79 TYR n 1 80 GLU n 1 81 MET n 1 82 HIS n 1 83 ARG n 1 84 THR n 1 85 LEU n 1 86 SER n 1 87 LYS n 1 88 ALA n 1 89 VAL n 1 90 SER n 1 91 ARG n 1 92 ALA n 1 93 LEU n 1 94 GLU n 1 95 GLU n 1 96 GLY n 1 97 ARG n 1 98 GLU n 1 99 ARG n 1 100 LEU n 1 101 LEU n 1 102 TRP n 1 103 ARG n 1 104 LEU n 1 105 GLU n 1 106 PRO n 1 107 ALA n 1 108 ARG n 1 109 GLY n 1 110 LEU n 1 111 GLU n 1 112 PRO n 1 113 PRO n 1 114 VAL n 1 115 VAL n 1 116 LEU n 1 117 VAL n 1 118 GLN n 1 119 THR n 1 120 LEU n 1 121 THR n 1 122 GLU n 1 123 PRO n 1 124 ASP n 1 125 TRP n 1 126 SER n 1 127 VAL n 1 128 LEU n 1 129 ASP n 1 130 GLU n 1 131 GLY n 1 132 TYR n 1 133 ALA n 1 134 GLN n 1 135 VAL n 1 136 PHE n 1 137 PRO n 1 138 PRO n 1 139 LYS n 1 140 PRO n 1 141 PHE n 1 142 HIS n 1 143 PRO n 1 144 ALA n 1 145 LEU n 1 146 LYS n 1 147 PRO n 1 148 GLY n 1 149 GLN n 1 150 ARG n 1 151 LEU n 1 152 ARG n 1 153 PHE n 1 154 ARG n 1 155 LEU n 1 156 ARG n 1 157 ALA n 1 158 ASN n 1 159 PRO n 1 160 ALA n 1 161 LYS n 1 162 ARG n 1 163 LEU n 1 164 ALA n 1 165 ALA n 1 166 THR n 1 167 GLY n 1 168 LYS n 1 169 ARG n 1 170 VAL n 1 171 ALA n 1 172 LEU n 1 173 LYS n 1 174 THR n 1 175 PRO n 1 176 ALA n 1 177 GLU n 1 178 LYS n 1 179 VAL n 1 180 ALA n 1 181 TRP n 1 182 LEU n 1 183 GLU n 1 184 ARG n 1 185 ARG n 1 186 LEU n 1 187 GLU n 1 188 GLU n 1 189 GLY n 1 190 GLY n 1 191 PHE n 1 192 ARG n 1 193 LEU n 1 194 LEU n 1 195 GLU n 1 196 GLY n 1 197 GLU n 1 198 ARG n 1 199 GLY n 1 200 PRO n 1 201 TRP n 1 202 VAL n 1 203 GLN n 1 204 ILE n 1 205 LEU n 1 206 GLN n 1 207 ASP n 1 208 THR n 1 209 PHE n 1 210 LEU n 1 211 GLU n 1 212 VAL n 1 213 ARG n 1 214 ARG n 1 215 LYS n 1 216 LYS n 1 217 ASP n 1 218 GLY n 1 219 GLU n 1 220 GLU n 1 221 ALA n 1 222 GLY n 1 223 LYS n 1 224 LEU n 1 225 LEU n 1 226 GLN n 1 227 VAL n 1 228 GLN n 1 229 ALA n 1 230 VAL n 1 231 LEU n 1 232 PHE n 1 233 GLU n 1 234 GLY n 1 235 ARG n 1 236 LEU n 1 237 GLU n 1 238 VAL n 1 239 VAL n 1 240 ASP n 1 241 PRO n 1 242 GLU n 1 243 ARG n 1 244 ALA n 1 245 LEU n 1 246 ALA n 1 247 THR n 1 248 LEU n 1 249 ARG n 1 250 ARG n 1 251 GLY n 1 252 VAL n 1 253 GLY n 1 254 PRO n 1 255 GLY n 1 256 LYS n 1 257 ALA n 1 258 LEU n 1 259 GLY n 1 260 LEU n 1 261 GLY n 1 262 LEU n 1 263 LEU n 1 264 SER n 1 265 VAL n 1 266 ALA n 1 267 PRO n 2 1 G n 2 2 U n 2 3 C n 2 4 C n 2 5 C n 2 6 C n 2 7 A n 2 8 C n 2 9 G n 2 10 C n 2 11 G n 2 12 U n 2 13 G n 2 14 U n 2 15 G n 2 16 G n 2 17 G n 2 18 DG n 2 19 A n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'TTHB1192, TTHB192' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain HB8 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermus thermophilus HB8' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 300852 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET30a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Chemically synthesized RNA' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -55 ? ? ? A . n A 1 2 HIS 2 -54 ? ? ? A . n A 1 3 HIS 3 -53 ? ? ? A . n A 1 4 HIS 4 -52 ? ? ? A . n A 1 5 HIS 5 -51 ? ? ? A . n A 1 6 HIS 6 -50 ? ? ? A . n A 1 7 HIS 7 -49 ? ? ? A . n A 1 8 SER 8 -48 ? ? ? A . n A 1 9 SER 9 -47 ? ? ? A . n A 1 10 GLY 10 -46 ? ? ? A . n A 1 11 LEU 11 -45 ? ? ? A . n A 1 12 VAL 12 -44 ? ? ? A . n A 1 13 PRO 13 -43 ? ? ? A . n A 1 14 ARG 14 -42 ? ? ? A . n A 1 15 GLY 15 -41 ? ? ? A . n A 1 16 SER 16 -40 ? ? ? A . n A 1 17 GLY 17 -39 ? ? ? A . n A 1 18 MET 18 -38 ? ? ? A . n A 1 19 LYS 19 -37 ? ? ? A . n A 1 20 GLU 20 -36 ? ? ? A . n A 1 21 THR 21 -35 ? ? ? A . n A 1 22 ALA 22 -34 ? ? ? A . n A 1 23 ALA 23 -33 ? ? ? A . n A 1 24 ALA 24 -32 ? ? ? A . n A 1 25 LYS 25 -31 ? ? ? A . n A 1 26 PHE 26 -30 ? ? ? A . n A 1 27 GLU 27 -29 ? ? ? A . n A 1 28 ARG 28 -28 ? ? ? A . n A 1 29 GLN 29 -27 ? ? ? A . n A 1 30 HIS 30 -26 ? ? ? A . n A 1 31 MET 31 -25 ? ? ? A . n A 1 32 ASP 32 -24 ? ? ? A . n A 1 33 SER 33 -23 ? ? ? A . n A 1 34 PRO 34 -22 ? ? ? A . n A 1 35 ASP 35 -21 ? ? ? A . n A 1 36 LEU 36 -20 ? ? ? A . n A 1 37 GLY 37 -19 ? ? ? A . n A 1 38 THR 38 -18 ? ? ? A . n A 1 39 ASP 39 -17 ? ? ? A . n A 1 40 ASP 40 -16 ? ? ? A . n A 1 41 ASP 41 -15 ? ? ? A . n A 1 42 ASP 42 -14 ? ? ? A . n A 1 43 LYS 43 -13 ? ? ? A . n A 1 44 ALA 44 -12 ? ? ? A . n A 1 45 MET 45 -11 ? ? ? A . n A 1 46 ALA 46 -10 ? ? ? A . n A 1 47 ASP 47 -9 ? ? ? A . n A 1 48 ILE 48 -8 ? ? ? A . n A 1 49 GLY 49 -7 ? ? ? A . n A 1 50 SER 50 -6 ? ? ? A . n A 1 51 GLU 51 -5 ? ? ? A . n A 1 52 ASN 52 -4 ? ? ? A . n A 1 53 LEU 53 -3 ? ? ? A . n A 1 54 TYR 54 -2 ? ? ? A . n A 1 55 PHE 55 -1 -1 PHE PHE A . n A 1 56 GLN 56 0 0 GLN GLN A . n A 1 57 MET 57 1 1 MET MET A . n A 1 58 TRP 58 2 2 TRP TRP A . n A 1 59 LEU 59 3 3 LEU LEU A . n A 1 60 THR 60 4 4 THR THR A . n A 1 61 LYS 61 5 5 LYS LYS A . n A 1 62 LEU 62 6 6 LEU LEU A . n A 1 63 VAL 63 7 7 VAL VAL A . n A 1 64 LEU 64 8 8 LEU LEU A . n A 1 65 ASN 65 9 9 ASN ASN A . n A 1 66 PRO 66 10 10 PRO PRO A . n A 1 67 ALA 67 11 11 ALA ALA A . n A 1 68 SER 68 12 12 SER SER A . n A 1 69 ARG 69 13 13 ARG ARG A . n A 1 70 ALA 70 14 14 ALA ALA A . n A 1 71 ALA 71 15 15 ALA ALA A . n A 1 72 ARG 72 16 16 ARG ARG A . n A 1 73 ARG 73 17 17 ARG ARG A . n A 1 74 ASP 74 18 18 ASP ASP A . n A 1 75 LEU 75 19 19 LEU LEU A . n A 1 76 ALA 76 20 20 ALA ALA A . n A 1 77 ASN 77 21 21 ASN ASN A . n A 1 78 PRO 78 22 22 PRO PRO A . n A 1 79 TYR 79 23 23 TYR TYR A . n A 1 80 GLU 80 24 24 GLU GLU A . n A 1 81 MET 81 25 25 MET MET A . n A 1 82 HIS 82 26 26 HIS HIS A . n A 1 83 ARG 83 27 27 ARG ARG A . n A 1 84 THR 84 28 28 THR THR A . n A 1 85 LEU 85 29 29 LEU LEU A . n A 1 86 SER 86 30 30 SER SER A . n A 1 87 LYS 87 31 31 LYS LYS A . n A 1 88 ALA 88 32 32 ALA ALA A . n A 1 89 VAL 89 33 33 VAL VAL A . n A 1 90 SER 90 34 34 SER SER A . n A 1 91 ARG 91 35 35 ARG ARG A . n A 1 92 ALA 92 36 36 ALA ALA A . n A 1 93 LEU 93 37 37 LEU LEU A . n A 1 94 GLU 94 38 38 GLU GLU A . n A 1 95 GLU 95 39 39 GLU GLU A . n A 1 96 GLY 96 40 40 GLY GLY A . n A 1 97 ARG 97 41 41 ARG ARG A . n A 1 98 GLU 98 42 42 GLU GLU A . n A 1 99 ARG 99 43 43 ARG ARG A . n A 1 100 LEU 100 44 44 LEU LEU A . n A 1 101 LEU 101 45 45 LEU LEU A . n A 1 102 TRP 102 46 46 TRP TRP A . n A 1 103 ARG 103 47 47 ARG ARG A . n A 1 104 LEU 104 48 48 LEU LEU A . n A 1 105 GLU 105 49 49 GLU GLU A . n A 1 106 PRO 106 50 50 PRO PRO A . n A 1 107 ALA 107 51 51 ALA ALA A . n A 1 108 ARG 108 52 52 ARG ARG A . n A 1 109 GLY 109 53 53 GLY GLY A . n A 1 110 LEU 110 54 54 LEU LEU A . n A 1 111 GLU 111 55 55 GLU GLU A . n A 1 112 PRO 112 56 56 PRO PRO A . n A 1 113 PRO 113 57 57 PRO PRO A . n A 1 114 VAL 114 58 58 VAL VAL A . n A 1 115 VAL 115 59 59 VAL VAL A . n A 1 116 LEU 116 60 60 LEU LEU A . n A 1 117 VAL 117 61 61 VAL VAL A . n A 1 118 GLN 118 62 62 GLN GLN A . n A 1 119 THR 119 63 63 THR THR A . n A 1 120 LEU 120 64 64 LEU LEU A . n A 1 121 THR 121 65 65 THR THR A . n A 1 122 GLU 122 66 66 GLU GLU A . n A 1 123 PRO 123 67 67 PRO PRO A . n A 1 124 ASP 124 68 68 ASP ASP A . n A 1 125 TRP 125 69 69 TRP TRP A . n A 1 126 SER 126 70 70 SER SER A . n A 1 127 VAL 127 71 71 VAL VAL A . n A 1 128 LEU 128 72 72 LEU LEU A . n A 1 129 ASP 129 73 73 ASP ASP A . n A 1 130 GLU 130 74 74 GLU GLU A . n A 1 131 GLY 131 75 75 GLY GLY A . n A 1 132 TYR 132 76 76 TYR TYR A . n A 1 133 ALA 133 77 77 ALA ALA A . n A 1 134 GLN 134 78 78 GLN GLN A . n A 1 135 VAL 135 79 79 VAL VAL A . n A 1 136 PHE 136 80 80 PHE PHE A . n A 1 137 PRO 137 81 81 PRO PRO A . n A 1 138 PRO 138 82 82 PRO PRO A . n A 1 139 LYS 139 83 83 LYS LYS A . n A 1 140 PRO 140 84 84 PRO PRO A . n A 1 141 PHE 141 85 85 PHE PHE A . n A 1 142 HIS 142 86 86 HIS HIS A . n A 1 143 PRO 143 87 87 PRO PRO A . n A 1 144 ALA 144 88 88 ALA ALA A . n A 1 145 LEU 145 89 89 LEU LEU A . n A 1 146 LYS 146 90 90 LYS LYS A . n A 1 147 PRO 147 91 91 PRO PRO A . n A 1 148 GLY 148 92 92 GLY GLY A . n A 1 149 GLN 149 93 93 GLN GLN A . n A 1 150 ARG 150 94 94 ARG ARG A . n A 1 151 LEU 151 95 95 LEU LEU A . n A 1 152 ARG 152 96 96 ARG ARG A . n A 1 153 PHE 153 97 97 PHE PHE A . n A 1 154 ARG 154 98 98 ARG ARG A . n A 1 155 LEU 155 99 99 LEU LEU A . n A 1 156 ARG 156 100 100 ARG ARG A . n A 1 157 ALA 157 101 101 ALA ALA A . n A 1 158 ASN 158 102 102 ASN ASN A . n A 1 159 PRO 159 103 103 PRO PRO A . n A 1 160 ALA 160 104 104 ALA ALA A . n A 1 161 LYS 161 105 105 LYS LYS A . n A 1 162 ARG 162 106 106 ARG ARG A . n A 1 163 LEU 163 107 107 LEU LEU A . n A 1 164 ALA 164 108 108 ALA ALA A . n A 1 165 ALA 165 109 109 ALA ALA A . n A 1 166 THR 166 110 110 THR THR A . n A 1 167 GLY 167 111 111 GLY GLY A . n A 1 168 LYS 168 112 112 LYS LYS A . n A 1 169 ARG 169 113 113 ARG ARG A . n A 1 170 VAL 170 114 114 VAL VAL A . n A 1 171 ALA 171 115 115 ALA ALA A . n A 1 172 LEU 172 116 116 LEU LEU A . n A 1 173 LYS 173 117 117 LYS LYS A . n A 1 174 THR 174 118 118 THR THR A . n A 1 175 PRO 175 119 119 PRO PRO A . n A 1 176 ALA 176 120 120 ALA ALA A . n A 1 177 GLU 177 121 121 GLU GLU A . n A 1 178 LYS 178 122 122 LYS LYS A . n A 1 179 VAL 179 123 123 VAL VAL A . n A 1 180 ALA 180 124 124 ALA ALA A . n A 1 181 TRP 181 125 125 TRP TRP A . n A 1 182 LEU 182 126 126 LEU LEU A . n A 1 183 GLU 183 127 127 GLU GLU A . n A 1 184 ARG 184 128 128 ARG ARG A . n A 1 185 ARG 185 129 129 ARG ARG A . n A 1 186 LEU 186 130 130 LEU LEU A . n A 1 187 GLU 187 131 131 GLU GLU A . n A 1 188 GLU 188 132 132 GLU GLU A . n A 1 189 GLY 189 133 133 GLY GLY A . n A 1 190 GLY 190 134 134 GLY GLY A . n A 1 191 PHE 191 135 135 PHE PHE A . n A 1 192 ARG 192 136 136 ARG ARG A . n A 1 193 LEU 193 137 137 LEU LEU A . n A 1 194 LEU 194 138 138 LEU LEU A . n A 1 195 GLU 195 139 139 GLU GLU A . n A 1 196 GLY 196 140 140 GLY GLY A . n A 1 197 GLU 197 141 141 GLU GLU A . n A 1 198 ARG 198 142 142 ARG ARG A . n A 1 199 GLY 199 143 143 GLY GLY A . n A 1 200 PRO 200 144 144 PRO PRO A . n A 1 201 TRP 201 145 145 TRP TRP A . n A 1 202 VAL 202 146 146 VAL VAL A . n A 1 203 GLN 203 147 147 GLN GLN A . n A 1 204 ILE 204 148 148 ILE ILE A . n A 1 205 LEU 205 149 149 LEU LEU A . n A 1 206 GLN 206 150 150 GLN GLN A . n A 1 207 ASP 207 151 151 ASP ASP A . n A 1 208 THR 208 152 152 THR THR A . n A 1 209 PHE 209 153 153 PHE PHE A . n A 1 210 LEU 210 154 154 LEU LEU A . n A 1 211 GLU 211 155 155 GLU GLU A . n A 1 212 VAL 212 156 156 VAL VAL A . n A 1 213 ARG 213 157 157 ARG ARG A . n A 1 214 ARG 214 158 158 ARG ARG A . n A 1 215 LYS 215 159 ? ? ? A . n A 1 216 LYS 216 160 ? ? ? A . n A 1 217 ASP 217 161 ? ? ? A . n A 1 218 GLY 218 162 ? ? ? A . n A 1 219 GLU 219 163 ? ? ? A . n A 1 220 GLU 220 164 ? ? ? A . n A 1 221 ALA 221 165 ? ? ? A . n A 1 222 GLY 222 166 ? ? ? A . n A 1 223 LYS 223 167 ? ? ? A . n A 1 224 LEU 224 168 168 LEU LEU A . n A 1 225 LEU 225 169 169 LEU LEU A . n A 1 226 GLN 226 170 170 GLN GLN A . n A 1 227 VAL 227 171 171 VAL VAL A . n A 1 228 GLN 228 172 172 GLN GLN A . n A 1 229 ALA 229 173 173 ALA ALA A . n A 1 230 VAL 230 174 174 VAL VAL A . n A 1 231 LEU 231 175 175 LEU LEU A . n A 1 232 PHE 232 176 176 PHE PHE A . n A 1 233 GLU 233 177 177 GLU GLU A . n A 1 234 GLY 234 178 178 GLY GLY A . n A 1 235 ARG 235 179 179 ARG ARG A . n A 1 236 LEU 236 180 180 LEU LEU A . n A 1 237 GLU 237 181 181 GLU GLU A . n A 1 238 VAL 238 182 182 VAL VAL A . n A 1 239 VAL 239 183 183 VAL VAL A . n A 1 240 ASP 240 184 184 ASP ASP A . n A 1 241 PRO 241 185 185 PRO PRO A . n A 1 242 GLU 242 186 186 GLU GLU A . n A 1 243 ARG 243 187 187 ARG ARG A . n A 1 244 ALA 244 188 188 ALA ALA A . n A 1 245 LEU 245 189 189 LEU LEU A . n A 1 246 ALA 246 190 190 ALA ALA A . n A 1 247 THR 247 191 191 THR THR A . n A 1 248 LEU 248 192 192 LEU LEU A . n A 1 249 ARG 249 193 193 ARG ARG A . n A 1 250 ARG 250 194 194 ARG ARG A . n A 1 251 GLY 251 195 195 GLY GLY A . n A 1 252 VAL 252 196 196 VAL VAL A . n A 1 253 GLY 253 197 197 GLY GLY A . n A 1 254 PRO 254 198 198 PRO PRO A . n A 1 255 GLY 255 199 199 GLY GLY A . n A 1 256 LYS 256 200 200 LYS LYS A . n A 1 257 ALA 257 201 201 ALA ALA A . n A 1 258 LEU 258 202 202 LEU LEU A . n A 1 259 GLY 259 203 203 GLY GLY A . n A 1 260 LEU 260 204 204 LEU LEU A . n A 1 261 GLY 261 205 205 GLY GLY A . n A 1 262 LEU 262 206 206 LEU LEU A . n A 1 263 LEU 263 207 207 LEU LEU A . n A 1 264 SER 264 208 208 SER SER A . n A 1 265 VAL 265 209 209 VAL VAL A . n A 1 266 ALA 266 210 210 ALA ALA A . n A 1 267 PRO 267 211 211 PRO PRO A . n B 2 1 G 1 4 4 G G B . n B 2 2 U 2 5 5 U U B . n B 2 3 C 3 6 6 C C B . n B 2 4 C 4 7 7 C C B . n B 2 5 C 5 8 8 C C B . n B 2 6 C 6 9 9 C C B . n B 2 7 A 7 10 10 A A B . n B 2 8 C 8 11 11 C C B . n B 2 9 G 9 12 12 G G B . n B 2 10 C 10 13 13 C C B . n B 2 11 G 11 14 14 G G B . n B 2 12 U 12 15 15 U U B . n B 2 13 G 13 16 16 G G B . n B 2 14 U 14 17 17 U U B . n B 2 15 G 15 18 18 G G B . n B 2 16 G 16 19 19 G G B . n B 2 17 G 17 20 20 G G B . n B 2 18 DG 18 21 21 DG DG B . n B 2 19 A 19 22 22 A A B . n # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHASER 1.3.1 '1 July 2005' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 REFMAC 5.2.0005 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 HKL-2000 . ? ? ? ? 'data collection' ? ? ? # _cell.length_a 61.500 _cell.length_b 68.910 _cell.length_c 158.063 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3QRQ _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.entry_id 3QRQ _symmetry.Int_Tables_number 23 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.entry_id 3QRQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.32 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 46.95 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'vapour diffusion, hanging drop' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details '15% PEG 3350, 100mM KOAc, 1mM spermidine, pH 7.5, vapour diffusion, hanging drop, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.pdbx_collection_date 2010-06-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'double crystal' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97945 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.97945 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL11-1 # _reflns.entry_id 3QRQ _reflns.d_resolution_high 3.194 _reflns.d_resolution_low 45.884 _reflns.number_obs 5725 _reflns.pdbx_Rmerge_I_obs 0.168 _reflns.pdbx_netI_over_sigmaI 5.500 _reflns.pdbx_chi_squared 1.004 _reflns.pdbx_redundancy 7.800 _reflns.percent_possible_obs 97.600 _reflns.observed_criterion_sigma_F 2 _reflns.observed_criterion_sigma_I 2 _reflns.number_all 5874 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 3.194 3.310 ? ? ? 0.412 ? ? 1.023 3.700 ? 514 89.400 1 1 3.310 3.450 ? ? ? 0.340 ? ? 0.976 4.100 ? 523 92.100 2 1 3.450 3.600 ? ? ? 0.276 ? ? 0.940 4.100 ? 563 97.400 3 1 3.600 3.790 ? ? ? 0.198 ? ? 0.899 4.200 ? 556 98.100 4 1 3.790 4.030 ? ? ? 0.182 ? ? 0.952 5.000 ? 579 98.500 5 1 4.030 4.340 ? ? ? 0.207 ? ? 1.003 11.400 ? 577 100.000 6 1 4.340 4.780 ? ? ? 0.172 ? ? 1.027 11.500 ? 578 100.000 7 1 4.780 5.470 ? ? ? 0.167 ? ? 1.006 11.300 ? 597 100.000 8 1 5.470 6.890 ? ? ? 0.188 ? ? 1.026 11.100 ? 596 100.000 9 1 6.890 45.884 ? ? ? 0.072 ? ? 1.031 10.300 ? 642 99.700 10 1 # _refine.entry_id 3QRQ _refine.ls_d_res_high 3.1940 _refine.ls_d_res_low 45.884 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 97.4100 _refine.ls_number_reflns_obs 5724 _refine.ls_number_reflns_all 5586 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2129 _refine.ls_R_factor_R_work 0.2101 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2663 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.8000 _refine.ls_number_reflns_R_free 272 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 46.960 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.3000 _refine.aniso_B[2][2] -2.1800 _refine.aniso_B[3][3] 2.4800 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9080 _refine.correlation_coeff_Fo_to_Fc_free 0.8560 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free 0.5330 _refine.overall_SU_ML 0.4060 _refine.overall_SU_B 50.0570 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 57.870 _refine.B_iso_min 9.800 _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1631 _refine_hist.pdbx_number_atoms_nucleic_acid 404 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2035 _refine_hist.d_res_high 3.1940 _refine_hist.d_res_low 45.884 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2118 0.006 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2961 1.008 2.235 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 202 5.178 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 75 33.704 21.200 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 293 16.893 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 25 16.597 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 342 0.127 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1467 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 810 0.185 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1345 0.301 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 40 0.111 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 60 0.145 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 16 0.122 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1051 0.278 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1639 0.503 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 1348 0.475 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 1322 0.937 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 3.1940 _refine_ls_shell.d_res_low 3.2770 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 87.3000 _refine_ls_shell.number_reflns_R_work 361 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2800 _refine_ls_shell.R_factor_R_free 0.3490 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 17 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 378 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3QRQ _struct.title 'Structure of Thermus Thermophilus Cse3 bound to an RNA representing a pre-cleavage complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3QRQ _struct_keywords.text 'protein-RNA complex, RAMP domain, RNA BINDING PROTEIN-RNA complex' _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN/RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q53WG9_THET8 Q53WG9 1 ;MWLTKLVLNPASRAARRDLANPYEMHRTLSKAVSRALEEGRERLLWRLEPARGLEPPVVLVQTLTEPDWSVLDEGYAQVF PPKPFHPALKPGQRLRFRLRANPAKRLAATGKRVALKTPAEKVAWLERRLEEGGFRLLEGERGPWVQILQDTFLEVRRKK DGEEAGKLLQVQAVLFEGRLEVVDPERALATLRRGVGPGKALGLGLLSVAP ; 1 ? 2 PDB 3QRQ 3QRQ 2 GUCCCCACGCGUGUGGGGA 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3QRQ A 57 ? 267 ? Q53WG9 1 ? 211 ? 1 211 2 2 3QRQ B 1 ? 19 ? 3QRQ 4 ? 22 ? 4 22 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3QRQ MET A 1 ? UNP Q53WG9 ? ? 'expression tag' -55 1 1 3QRQ HIS A 2 ? UNP Q53WG9 ? ? 'expression tag' -54 2 1 3QRQ HIS A 3 ? UNP Q53WG9 ? ? 'expression tag' -53 3 1 3QRQ HIS A 4 ? UNP Q53WG9 ? ? 'expression tag' -52 4 1 3QRQ HIS A 5 ? UNP Q53WG9 ? ? 'expression tag' -51 5 1 3QRQ HIS A 6 ? UNP Q53WG9 ? ? 'expression tag' -50 6 1 3QRQ HIS A 7 ? UNP Q53WG9 ? ? 'expression tag' -49 7 1 3QRQ SER A 8 ? UNP Q53WG9 ? ? 'expression tag' -48 8 1 3QRQ SER A 9 ? UNP Q53WG9 ? ? 'expression tag' -47 9 1 3QRQ GLY A 10 ? UNP Q53WG9 ? ? 'expression tag' -46 10 1 3QRQ LEU A 11 ? UNP Q53WG9 ? ? 'expression tag' -45 11 1 3QRQ VAL A 12 ? UNP Q53WG9 ? ? 'expression tag' -44 12 1 3QRQ PRO A 13 ? UNP Q53WG9 ? ? 'expression tag' -43 13 1 3QRQ ARG A 14 ? UNP Q53WG9 ? ? 'expression tag' -42 14 1 3QRQ GLY A 15 ? UNP Q53WG9 ? ? 'expression tag' -41 15 1 3QRQ SER A 16 ? UNP Q53WG9 ? ? 'expression tag' -40 16 1 3QRQ GLY A 17 ? UNP Q53WG9 ? ? 'expression tag' -39 17 1 3QRQ MET A 18 ? UNP Q53WG9 ? ? 'expression tag' -38 18 1 3QRQ LYS A 19 ? UNP Q53WG9 ? ? 'expression tag' -37 19 1 3QRQ GLU A 20 ? UNP Q53WG9 ? ? 'expression tag' -36 20 1 3QRQ THR A 21 ? UNP Q53WG9 ? ? 'expression tag' -35 21 1 3QRQ ALA A 22 ? UNP Q53WG9 ? ? 'expression tag' -34 22 1 3QRQ ALA A 23 ? UNP Q53WG9 ? ? 'expression tag' -33 23 1 3QRQ ALA A 24 ? UNP Q53WG9 ? ? 'expression tag' -32 24 1 3QRQ LYS A 25 ? UNP Q53WG9 ? ? 'expression tag' -31 25 1 3QRQ PHE A 26 ? UNP Q53WG9 ? ? 'expression tag' -30 26 1 3QRQ GLU A 27 ? UNP Q53WG9 ? ? 'expression tag' -29 27 1 3QRQ ARG A 28 ? UNP Q53WG9 ? ? 'expression tag' -28 28 1 3QRQ GLN A 29 ? UNP Q53WG9 ? ? 'expression tag' -27 29 1 3QRQ HIS A 30 ? UNP Q53WG9 ? ? 'expression tag' -26 30 1 3QRQ MET A 31 ? UNP Q53WG9 ? ? 'expression tag' -25 31 1 3QRQ ASP A 32 ? UNP Q53WG9 ? ? 'expression tag' -24 32 1 3QRQ SER A 33 ? UNP Q53WG9 ? ? 'expression tag' -23 33 1 3QRQ PRO A 34 ? UNP Q53WG9 ? ? 'expression tag' -22 34 1 3QRQ ASP A 35 ? UNP Q53WG9 ? ? 'expression tag' -21 35 1 3QRQ LEU A 36 ? UNP Q53WG9 ? ? 'expression tag' -20 36 1 3QRQ GLY A 37 ? UNP Q53WG9 ? ? 'expression tag' -19 37 1 3QRQ THR A 38 ? UNP Q53WG9 ? ? 'expression tag' -18 38 1 3QRQ ASP A 39 ? UNP Q53WG9 ? ? 'expression tag' -17 39 1 3QRQ ASP A 40 ? UNP Q53WG9 ? ? 'expression tag' -16 40 1 3QRQ ASP A 41 ? UNP Q53WG9 ? ? 'expression tag' -15 41 1 3QRQ ASP A 42 ? UNP Q53WG9 ? ? 'expression tag' -14 42 1 3QRQ LYS A 43 ? UNP Q53WG9 ? ? 'expression tag' -13 43 1 3QRQ ALA A 44 ? UNP Q53WG9 ? ? 'expression tag' -12 44 1 3QRQ MET A 45 ? UNP Q53WG9 ? ? 'expression tag' -11 45 1 3QRQ ALA A 46 ? UNP Q53WG9 ? ? 'expression tag' -10 46 1 3QRQ ASP A 47 ? UNP Q53WG9 ? ? 'expression tag' -9 47 1 3QRQ ILE A 48 ? UNP Q53WG9 ? ? 'expression tag' -8 48 1 3QRQ GLY A 49 ? UNP Q53WG9 ? ? 'expression tag' -7 49 1 3QRQ SER A 50 ? UNP Q53WG9 ? ? 'expression tag' -6 50 1 3QRQ GLU A 51 ? UNP Q53WG9 ? ? 'expression tag' -5 51 1 3QRQ ASN A 52 ? UNP Q53WG9 ? ? 'expression tag' -4 52 1 3QRQ LEU A 53 ? UNP Q53WG9 ? ? 'expression tag' -3 53 1 3QRQ TYR A 54 ? UNP Q53WG9 ? ? 'expression tag' -2 54 1 3QRQ PHE A 55 ? UNP Q53WG9 ? ? 'expression tag' -1 55 1 3QRQ GLN A 56 ? UNP Q53WG9 ? ? 'expression tag' 0 56 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_and_software_defined_assembly PISA tetrameric 4 3 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 7340 ? 2 MORE -38 ? 2 'SSA (A^2)' 25090 ? 3 'ABSA (A^2)' 1800 ? 3 MORE -14 ? 3 'SSA (A^2)' 14420 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B 2 1,2 A,B 3 1 A 3 2 B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 68 ? ASN A 77 ? SER A 12 ASN A 21 1 ? 10 HELX_P HELX_P2 2 ASN A 77 ? SER A 86 ? ASN A 21 SER A 30 1 ? 10 HELX_P HELX_P3 3 VAL A 89 ? GLU A 95 ? VAL A 33 GLU A 39 1 ? 7 HELX_P HELX_P4 4 ASP A 124 ? LEU A 128 ? ASP A 68 LEU A 72 5 ? 5 HELX_P HELX_P5 5 THR A 174 ? GLY A 189 ? THR A 118 GLY A 133 1 ? 16 HELX_P HELX_P6 6 ASP A 240 ? GLY A 251 ? ASP A 184 GLY A 195 1 ? 12 HELX_P HELX_P7 7 GLY A 255 ? GLY A 259 ? GLY A 199 GLY A 203 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? B C 3 N3 ? ? ? 1_555 B DG 18 N1 ? ? B C 6 B DG 21 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B C 3 N4 ? ? ? 1_555 B DG 18 O6 ? ? B C 6 B DG 21 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B C 3 O2 ? ? ? 1_555 B DG 18 N2 ? ? B C 6 B DG 21 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B C 4 N3 ? ? ? 1_555 B G 17 N1 ? ? B C 7 B G 20 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B C 4 N4 ? ? ? 1_555 B G 17 O6 ? ? B C 7 B G 20 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B C 4 O2 ? ? ? 1_555 B G 17 N2 ? ? B C 7 B G 20 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B C 5 N3 ? ? ? 1_555 B G 16 N1 ? ? B C 8 B G 19 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B C 5 N4 ? ? ? 1_555 B G 16 O6 ? ? B C 8 B G 19 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B C 5 O2 ? ? ? 1_555 B G 16 N2 ? ? B C 8 B G 19 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B C 6 N3 ? ? ? 1_555 B G 15 N1 ? ? B C 9 B G 18 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B C 6 N4 ? ? ? 1_555 B G 15 O6 ? ? B C 9 B G 18 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B C 6 O2 ? ? ? 1_555 B G 15 N2 ? ? B C 9 B G 18 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B A 7 N1 ? ? ? 1_555 B U 14 N3 ? ? B A 10 B U 17 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B A 7 N6 ? ? ? 1_555 B U 14 O4 ? ? B A 10 B U 17 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B C 8 N3 ? ? ? 1_555 B G 13 N1 ? ? B C 11 B G 16 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B C 8 N4 ? ? ? 1_555 B G 13 O6 ? ? B C 11 B G 16 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B C 8 O2 ? ? ? 1_555 B G 13 N2 ? ? B C 11 B G 16 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B G 9 N1 ? ? ? 1_555 B U 12 O2 ? ? B G 12 B U 15 3_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog19 hydrog ? ? B G 9 O6 ? ? ? 1_555 B U 12 N3 ? ? B G 12 B U 15 3_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog20 hydrog ? ? B C 10 N3 ? ? ? 1_555 B G 11 N1 ? ? B C 13 B G 14 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B C 10 N4 ? ? ? 1_555 B G 11 O6 ? ? B C 13 B G 14 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B C 10 O2 ? ? ? 1_555 B G 11 N2 ? ? B C 13 B G 14 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B G 11 N1 ? ? ? 1_555 B C 10 N3 ? ? B G 14 B C 13 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B G 11 N2 ? ? ? 1_555 B C 10 O2 ? ? B G 14 B C 13 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B G 11 O6 ? ? ? 1_555 B C 10 N4 ? ? B G 14 B C 13 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B U 12 N3 ? ? ? 1_555 B G 9 O6 ? ? B U 15 B G 12 3_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog27 hydrog ? ? B U 12 O2 ? ? ? 1_555 B G 9 N1 ? ? B U 15 B G 12 3_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog28 hydrog ? ? B G 13 N1 ? ? ? 1_555 B C 8 N3 ? ? B G 16 B C 11 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B G 13 N2 ? ? ? 1_555 B C 8 O2 ? ? B G 16 B C 11 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B G 13 O6 ? ? ? 1_555 B C 8 N4 ? ? B G 16 B C 11 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B U 14 N3 ? ? ? 1_555 B A 7 N1 ? ? B U 17 B A 10 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B U 14 O4 ? ? ? 1_555 B A 7 N6 ? ? B U 17 B A 10 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B G 15 N1 ? ? ? 1_555 B C 6 N3 ? ? B G 18 B C 9 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B G 15 N2 ? ? ? 1_555 B C 6 O2 ? ? B G 18 B C 9 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B G 15 O6 ? ? ? 1_555 B C 6 N4 ? ? B G 18 B C 9 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B G 16 N1 ? ? ? 1_555 B C 5 N3 ? ? B G 19 B C 8 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B G 16 N2 ? ? ? 1_555 B C 5 O2 ? ? B G 19 B C 8 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B G 16 O6 ? ? ? 1_555 B C 5 N4 ? ? B G 19 B C 8 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B G 17 N1 ? ? ? 1_555 B C 4 N3 ? ? B G 20 B C 7 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B G 17 N2 ? ? ? 1_555 B C 4 O2 ? ? B G 20 B C 7 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B G 17 O6 ? ? ? 1_555 B C 4 N4 ? ? B G 20 B C 7 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B DG 18 N1 ? ? ? 1_555 B C 3 N3 ? ? B DG 21 B C 6 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B DG 18 N2 ? ? ? 1_555 B C 3 O2 ? ? B DG 21 B C 6 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B DG 18 O6 ? ? ? 1_555 B C 3 N4 ? ? B DG 21 B C 6 3_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 109 A . ? GLY 53 A LEU 110 A ? LEU 54 A 1 1.57 2 GLU 111 A . ? GLU 55 A PRO 112 A ? PRO 56 A 1 -14.06 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 3 ? C ? 4 ? D ? 2 ? E ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel E 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 101 ? LEU A 104 ? LEU A 45 LEU A 48 A 2 VAL A 114 ? THR A 119 ? VAL A 58 THR A 63 A 3 MET A 57 ? LEU A 64 ? MET A 1 LEU A 8 A 4 ALA A 133 ? PHE A 141 ? ALA A 77 PHE A 85 B 1 PHE A 191 ? LEU A 193 ? PHE A 135 LEU A 137 B 2 LEU A 225 ? VAL A 238 ? LEU A 169 VAL A 182 B 3 VAL A 202 ? VAL A 212 ? VAL A 146 VAL A 156 C 1 PHE A 191 ? LEU A 193 ? PHE A 135 LEU A 137 C 2 LEU A 225 ? VAL A 238 ? LEU A 169 VAL A 182 C 3 ARG A 150 ? ALA A 157 ? ARG A 94 ALA A 101 C 4 LEU A 263 ? ALA A 266 ? LEU A 207 ALA A 210 D 1 ALA A 160 ? ARG A 162 ? ALA A 104 ARG A 106 D 2 ARG A 169 ? ALA A 171 ? ARG A 113 ALA A 115 E 1 GLU A 195 ? GLY A 196 ? GLU A 139 GLY A 140 E 2 GLY A 199 ? PRO A 200 ? GLY A 143 PRO A 144 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 101 ? N LEU A 45 O GLN A 118 ? O GLN A 62 A 2 3 O VAL A 115 ? O VAL A 59 N LEU A 62 ? N LEU A 6 A 3 4 N VAL A 63 ? N VAL A 7 O GLN A 134 ? O GLN A 78 B 1 2 N ARG A 192 ? N ARG A 136 O GLU A 237 ? O GLU A 181 B 2 3 O ALA A 229 ? O ALA A 173 N THR A 208 ? N THR A 152 C 1 2 N ARG A 192 ? N ARG A 136 O GLU A 237 ? O GLU A 181 C 2 3 O PHE A 232 ? O PHE A 176 N LEU A 155 ? N LEU A 99 C 3 4 N ARG A 154 ? N ARG A 98 O SER A 264 ? O SER A 208 D 1 2 N LYS A 161 ? N LYS A 105 O VAL A 170 ? O VAL A 114 E 1 2 N GLY A 196 ? N GLY A 140 O GLY A 199 ? O GLY A 143 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O3'" B C 13 ? ? P B G 14 ? ? "O5'" B G 14 ? ? 87.11 104.00 -16.89 1.90 Y 2 1 "O3'" B C 13 ? ? P B G 14 ? ? OP2 B G 14 ? ? 91.33 105.20 -13.87 2.20 Y 3 1 "O3'" B C 13 ? ? P B G 14 ? ? OP1 B G 14 ? ? 88.56 105.20 -16.64 2.20 Y 4 1 "O4'" B DG 21 ? ? "C1'" B DG 21 ? ? N9 B DG 21 ? ? 110.15 108.30 1.85 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 0 ? ? -121.62 -162.27 2 1 LEU A 54 ? ? 75.11 -31.14 3 1 GLU A 55 ? ? 66.96 -154.61 4 1 PRO A 81 ? ? -38.62 121.52 5 1 PRO A 84 ? ? -54.06 108.28 6 1 GLU A 141 ? ? -69.58 14.16 7 1 TRP A 145 ? ? -86.69 40.80 8 1 ASP A 151 ? ? -159.52 66.73 9 1 GLU A 155 ? ? -116.04 72.23 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -20.1840 -12.5260 -26.9440 -0.0442 0.1600 0.2500 0.0071 -0.0235 -0.0069 3.2363 2.7615 1.1911 0.9071 0.3609 0.9650 0.1209 -0.1122 -0.0087 -0.0864 0.0272 0.0180 0.1095 -0.0115 -0.0474 'X-RAY DIFFRACTION' 2 ? refined -1.8830 -14.8430 0.6780 0.2198 0.6028 0.2759 0.0560 -0.2724 -0.0629 0.4934 0.0144 2.5438 0.0843 1.1203 0.1914 -0.4714 0.3372 0.1342 0.0486 0.2181 -0.1510 -0.0503 0.2101 0.3018 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 7 A 219 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 B 4 B 21 ? . . . . ? # _pdbx_phasing_MR.entry_id 3QRQ _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 3.500 _pdbx_phasing_MR.d_res_low_rotation 45.880 _pdbx_phasing_MR.d_res_high_translation 3.500 _pdbx_phasing_MR.d_res_low_translation 45.880 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -55 ? A MET 1 2 1 Y 1 A HIS -54 ? A HIS 2 3 1 Y 1 A HIS -53 ? A HIS 3 4 1 Y 1 A HIS -52 ? A HIS 4 5 1 Y 1 A HIS -51 ? A HIS 5 6 1 Y 1 A HIS -50 ? A HIS 6 7 1 Y 1 A HIS -49 ? A HIS 7 8 1 Y 1 A SER -48 ? A SER 8 9 1 Y 1 A SER -47 ? A SER 9 10 1 Y 1 A GLY -46 ? A GLY 10 11 1 Y 1 A LEU -45 ? A LEU 11 12 1 Y 1 A VAL -44 ? A VAL 12 13 1 Y 1 A PRO -43 ? A PRO 13 14 1 Y 1 A ARG -42 ? A ARG 14 15 1 Y 1 A GLY -41 ? A GLY 15 16 1 Y 1 A SER -40 ? A SER 16 17 1 Y 1 A GLY -39 ? A GLY 17 18 1 Y 1 A MET -38 ? A MET 18 19 1 Y 1 A LYS -37 ? A LYS 19 20 1 Y 1 A GLU -36 ? A GLU 20 21 1 Y 1 A THR -35 ? A THR 21 22 1 Y 1 A ALA -34 ? A ALA 22 23 1 Y 1 A ALA -33 ? A ALA 23 24 1 Y 1 A ALA -32 ? A ALA 24 25 1 Y 1 A LYS -31 ? A LYS 25 26 1 Y 1 A PHE -30 ? A PHE 26 27 1 Y 1 A GLU -29 ? A GLU 27 28 1 Y 1 A ARG -28 ? A ARG 28 29 1 Y 1 A GLN -27 ? A GLN 29 30 1 Y 1 A HIS -26 ? A HIS 30 31 1 Y 1 A MET -25 ? A MET 31 32 1 Y 1 A ASP -24 ? A ASP 32 33 1 Y 1 A SER -23 ? A SER 33 34 1 Y 1 A PRO -22 ? A PRO 34 35 1 Y 1 A ASP -21 ? A ASP 35 36 1 Y 1 A LEU -20 ? A LEU 36 37 1 Y 1 A GLY -19 ? A GLY 37 38 1 Y 1 A THR -18 ? A THR 38 39 1 Y 1 A ASP -17 ? A ASP 39 40 1 Y 1 A ASP -16 ? A ASP 40 41 1 Y 1 A ASP -15 ? A ASP 41 42 1 Y 1 A ASP -14 ? A ASP 42 43 1 Y 1 A LYS -13 ? A LYS 43 44 1 Y 1 A ALA -12 ? A ALA 44 45 1 Y 1 A MET -11 ? A MET 45 46 1 Y 1 A ALA -10 ? A ALA 46 47 1 Y 1 A ASP -9 ? A ASP 47 48 1 Y 1 A ILE -8 ? A ILE 48 49 1 Y 1 A GLY -7 ? A GLY 49 50 1 Y 1 A SER -6 ? A SER 50 51 1 Y 1 A GLU -5 ? A GLU 51 52 1 Y 1 A ASN -4 ? A ASN 52 53 1 Y 1 A LEU -3 ? A LEU 53 54 1 Y 1 A TYR -2 ? A TYR 54 55 1 Y 1 A LYS 159 ? A LYS 215 56 1 Y 1 A LYS 160 ? A LYS 216 57 1 Y 1 A ASP 161 ? A ASP 217 58 1 Y 1 A GLY 162 ? A GLY 218 59 1 Y 1 A GLU 163 ? A GLU 219 60 1 Y 1 A GLU 164 ? A GLU 220 61 1 Y 1 A ALA 165 ? A ALA 221 62 1 Y 1 A GLY 166 ? A GLY 222 63 1 Y 1 A LYS 167 ? A LYS 223 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 DG OP3 O N N 146 DG P P N N 147 DG OP1 O N N 148 DG OP2 O N N 149 DG "O5'" O N N 150 DG "C5'" C N N 151 DG "C4'" C N R 152 DG "O4'" O N N 153 DG "C3'" C N S 154 DG "O3'" O N N 155 DG "C2'" C N N 156 DG "C1'" C N R 157 DG N9 N Y N 158 DG C8 C Y N 159 DG N7 N Y N 160 DG C5 C Y N 161 DG C6 C N N 162 DG O6 O N N 163 DG N1 N N N 164 DG C2 C N N 165 DG N2 N N N 166 DG N3 N N N 167 DG C4 C Y N 168 DG HOP3 H N N 169 DG HOP2 H N N 170 DG "H5'" H N N 171 DG "H5''" H N N 172 DG "H4'" H N N 173 DG "H3'" H N N 174 DG "HO3'" H N N 175 DG "H2'" H N N 176 DG "H2''" H N N 177 DG "H1'" H N N 178 DG H8 H N N 179 DG H1 H N N 180 DG H21 H N N 181 DG H22 H N N 182 G OP3 O N N 183 G P P N N 184 G OP1 O N N 185 G OP2 O N N 186 G "O5'" O N N 187 G "C5'" C N N 188 G "C4'" C N R 189 G "O4'" O N N 190 G "C3'" C N S 191 G "O3'" O N N 192 G "C2'" C N R 193 G "O2'" O N N 194 G "C1'" C N R 195 G N9 N Y N 196 G C8 C Y N 197 G N7 N Y N 198 G C5 C Y N 199 G C6 C N N 200 G O6 O N N 201 G N1 N N N 202 G C2 C N N 203 G N2 N N N 204 G N3 N N N 205 G C4 C Y N 206 G HOP3 H N N 207 G HOP2 H N N 208 G "H5'" H N N 209 G "H5''" H N N 210 G "H4'" H N N 211 G "H3'" H N N 212 G "HO3'" H N N 213 G "H2'" H N N 214 G "HO2'" H N N 215 G "H1'" H N N 216 G H8 H N N 217 G H1 H N N 218 G H21 H N N 219 G H22 H N N 220 GLN N N N N 221 GLN CA C N S 222 GLN C C N N 223 GLN O O N N 224 GLN CB C N N 225 GLN CG C N N 226 GLN CD C N N 227 GLN OE1 O N N 228 GLN NE2 N N N 229 GLN OXT O N N 230 GLN H H N N 231 GLN H2 H N N 232 GLN HA H N N 233 GLN HB2 H N N 234 GLN HB3 H N N 235 GLN HG2 H N N 236 GLN HG3 H N N 237 GLN HE21 H N N 238 GLN HE22 H N N 239 GLN HXT H N N 240 GLU N N N N 241 GLU CA C N S 242 GLU C C N N 243 GLU O O N N 244 GLU CB C N N 245 GLU CG C N N 246 GLU CD C N N 247 GLU OE1 O N N 248 GLU OE2 O N N 249 GLU OXT O N N 250 GLU H H N N 251 GLU H2 H N N 252 GLU HA H N N 253 GLU HB2 H N N 254 GLU HB3 H N N 255 GLU HG2 H N N 256 GLU HG3 H N N 257 GLU HE2 H N N 258 GLU HXT H N N 259 GLY N N N N 260 GLY CA C N N 261 GLY C C N N 262 GLY O O N N 263 GLY OXT O N N 264 GLY H H N N 265 GLY H2 H N N 266 GLY HA2 H N N 267 GLY HA3 H N N 268 GLY HXT H N N 269 HIS N N N N 270 HIS CA C N S 271 HIS C C N N 272 HIS O O N N 273 HIS CB C N N 274 HIS CG C Y N 275 HIS ND1 N Y N 276 HIS CD2 C Y N 277 HIS CE1 C Y N 278 HIS NE2 N Y N 279 HIS OXT O N N 280 HIS H H N N 281 HIS H2 H N N 282 HIS HA H N N 283 HIS HB2 H N N 284 HIS HB3 H N N 285 HIS HD1 H N N 286 HIS HD2 H N N 287 HIS HE1 H N N 288 HIS HE2 H N N 289 HIS HXT H N N 290 ILE N N N N 291 ILE CA C N S 292 ILE C C N N 293 ILE O O N N 294 ILE CB C N S 295 ILE CG1 C N N 296 ILE CG2 C N N 297 ILE CD1 C N N 298 ILE OXT O N N 299 ILE H H N N 300 ILE H2 H N N 301 ILE HA H N N 302 ILE HB H N N 303 ILE HG12 H N N 304 ILE HG13 H N N 305 ILE HG21 H N N 306 ILE HG22 H N N 307 ILE HG23 H N N 308 ILE HD11 H N N 309 ILE HD12 H N N 310 ILE HD13 H N N 311 ILE HXT H N N 312 LEU N N N N 313 LEU CA C N S 314 LEU C C N N 315 LEU O O N N 316 LEU CB C N N 317 LEU CG C N N 318 LEU CD1 C N N 319 LEU CD2 C N N 320 LEU OXT O N N 321 LEU H H N N 322 LEU H2 H N N 323 LEU HA H N N 324 LEU HB2 H N N 325 LEU HB3 H N N 326 LEU HG H N N 327 LEU HD11 H N N 328 LEU HD12 H N N 329 LEU HD13 H N N 330 LEU HD21 H N N 331 LEU HD22 H N N 332 LEU HD23 H N N 333 LEU HXT H N N 334 LYS N N N N 335 LYS CA C N S 336 LYS C C N N 337 LYS O O N N 338 LYS CB C N N 339 LYS CG C N N 340 LYS CD C N N 341 LYS CE C N N 342 LYS NZ N N N 343 LYS OXT O N N 344 LYS H H N N 345 LYS H2 H N N 346 LYS HA H N N 347 LYS HB2 H N N 348 LYS HB3 H N N 349 LYS HG2 H N N 350 LYS HG3 H N N 351 LYS HD2 H N N 352 LYS HD3 H N N 353 LYS HE2 H N N 354 LYS HE3 H N N 355 LYS HZ1 H N N 356 LYS HZ2 H N N 357 LYS HZ3 H N N 358 LYS HXT H N N 359 MET N N N N 360 MET CA C N S 361 MET C C N N 362 MET O O N N 363 MET CB C N N 364 MET CG C N N 365 MET SD S N N 366 MET CE C N N 367 MET OXT O N N 368 MET H H N N 369 MET H2 H N N 370 MET HA H N N 371 MET HB2 H N N 372 MET HB3 H N N 373 MET HG2 H N N 374 MET HG3 H N N 375 MET HE1 H N N 376 MET HE2 H N N 377 MET HE3 H N N 378 MET HXT H N N 379 PHE N N N N 380 PHE CA C N S 381 PHE C C N N 382 PHE O O N N 383 PHE CB C N N 384 PHE CG C Y N 385 PHE CD1 C Y N 386 PHE CD2 C Y N 387 PHE CE1 C Y N 388 PHE CE2 C Y N 389 PHE CZ C Y N 390 PHE OXT O N N 391 PHE H H N N 392 PHE H2 H N N 393 PHE HA H N N 394 PHE HB2 H N N 395 PHE HB3 H N N 396 PHE HD1 H N N 397 PHE HD2 H N N 398 PHE HE1 H N N 399 PHE HE2 H N N 400 PHE HZ H N N 401 PHE HXT H N N 402 PRO N N N N 403 PRO CA C N S 404 PRO C C N N 405 PRO O O N N 406 PRO CB C N N 407 PRO CG C N N 408 PRO CD C N N 409 PRO OXT O N N 410 PRO H H N N 411 PRO HA H N N 412 PRO HB2 H N N 413 PRO HB3 H N N 414 PRO HG2 H N N 415 PRO HG3 H N N 416 PRO HD2 H N N 417 PRO HD3 H N N 418 PRO HXT H N N 419 SER N N N N 420 SER CA C N S 421 SER C C N N 422 SER O O N N 423 SER CB C N N 424 SER OG O N N 425 SER OXT O N N 426 SER H H N N 427 SER H2 H N N 428 SER HA H N N 429 SER HB2 H N N 430 SER HB3 H N N 431 SER HG H N N 432 SER HXT H N N 433 THR N N N N 434 THR CA C N S 435 THR C C N N 436 THR O O N N 437 THR CB C N R 438 THR OG1 O N N 439 THR CG2 C N N 440 THR OXT O N N 441 THR H H N N 442 THR H2 H N N 443 THR HA H N N 444 THR HB H N N 445 THR HG1 H N N 446 THR HG21 H N N 447 THR HG22 H N N 448 THR HG23 H N N 449 THR HXT H N N 450 TRP N N N N 451 TRP CA C N S 452 TRP C C N N 453 TRP O O N N 454 TRP CB C N N 455 TRP CG C Y N 456 TRP CD1 C Y N 457 TRP CD2 C Y N 458 TRP NE1 N Y N 459 TRP CE2 C Y N 460 TRP CE3 C Y N 461 TRP CZ2 C Y N 462 TRP CZ3 C Y N 463 TRP CH2 C Y N 464 TRP OXT O N N 465 TRP H H N N 466 TRP H2 H N N 467 TRP HA H N N 468 TRP HB2 H N N 469 TRP HB3 H N N 470 TRP HD1 H N N 471 TRP HE1 H N N 472 TRP HE3 H N N 473 TRP HZ2 H N N 474 TRP HZ3 H N N 475 TRP HH2 H N N 476 TRP HXT H N N 477 TYR N N N N 478 TYR CA C N S 479 TYR C C N N 480 TYR O O N N 481 TYR CB C N N 482 TYR CG C Y N 483 TYR CD1 C Y N 484 TYR CD2 C Y N 485 TYR CE1 C Y N 486 TYR CE2 C Y N 487 TYR CZ C Y N 488 TYR OH O N N 489 TYR OXT O N N 490 TYR H H N N 491 TYR H2 H N N 492 TYR HA H N N 493 TYR HB2 H N N 494 TYR HB3 H N N 495 TYR HD1 H N N 496 TYR HD2 H N N 497 TYR HE1 H N N 498 TYR HE2 H N N 499 TYR HH H N N 500 TYR HXT H N N 501 U OP3 O N N 502 U P P N N 503 U OP1 O N N 504 U OP2 O N N 505 U "O5'" O N N 506 U "C5'" C N N 507 U "C4'" C N R 508 U "O4'" O N N 509 U "C3'" C N S 510 U "O3'" O N N 511 U "C2'" C N R 512 U "O2'" O N N 513 U "C1'" C N R 514 U N1 N N N 515 U C2 C N N 516 U O2 O N N 517 U N3 N N N 518 U C4 C N N 519 U O4 O N N 520 U C5 C N N 521 U C6 C N N 522 U HOP3 H N N 523 U HOP2 H N N 524 U "H5'" H N N 525 U "H5''" H N N 526 U "H4'" H N N 527 U "H3'" H N N 528 U "HO3'" H N N 529 U "H2'" H N N 530 U "HO2'" H N N 531 U "H1'" H N N 532 U H3 H N N 533 U H5 H N N 534 U H6 H N N 535 VAL N N N N 536 VAL CA C N S 537 VAL C C N N 538 VAL O O N N 539 VAL CB C N N 540 VAL CG1 C N N 541 VAL CG2 C N N 542 VAL OXT O N N 543 VAL H H N N 544 VAL H2 H N N 545 VAL HA H N N 546 VAL HB H N N 547 VAL HG11 H N N 548 VAL HG12 H N N 549 VAL HG13 H N N 550 VAL HG21 H N N 551 VAL HG22 H N N 552 VAL HG23 H N N 553 VAL HXT H N N 554 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 DG OP3 P sing N N 145 DG OP3 HOP3 sing N N 146 DG P OP1 doub N N 147 DG P OP2 sing N N 148 DG P "O5'" sing N N 149 DG OP2 HOP2 sing N N 150 DG "O5'" "C5'" sing N N 151 DG "C5'" "C4'" sing N N 152 DG "C5'" "H5'" sing N N 153 DG "C5'" "H5''" sing N N 154 DG "C4'" "O4'" sing N N 155 DG "C4'" "C3'" sing N N 156 DG "C4'" "H4'" sing N N 157 DG "O4'" "C1'" sing N N 158 DG "C3'" "O3'" sing N N 159 DG "C3'" "C2'" sing N N 160 DG "C3'" "H3'" sing N N 161 DG "O3'" "HO3'" sing N N 162 DG "C2'" "C1'" sing N N 163 DG "C2'" "H2'" sing N N 164 DG "C2'" "H2''" sing N N 165 DG "C1'" N9 sing N N 166 DG "C1'" "H1'" sing N N 167 DG N9 C8 sing Y N 168 DG N9 C4 sing Y N 169 DG C8 N7 doub Y N 170 DG C8 H8 sing N N 171 DG N7 C5 sing Y N 172 DG C5 C6 sing N N 173 DG C5 C4 doub Y N 174 DG C6 O6 doub N N 175 DG C6 N1 sing N N 176 DG N1 C2 sing N N 177 DG N1 H1 sing N N 178 DG C2 N2 sing N N 179 DG C2 N3 doub N N 180 DG N2 H21 sing N N 181 DG N2 H22 sing N N 182 DG N3 C4 sing N N 183 G OP3 P sing N N 184 G OP3 HOP3 sing N N 185 G P OP1 doub N N 186 G P OP2 sing N N 187 G P "O5'" sing N N 188 G OP2 HOP2 sing N N 189 G "O5'" "C5'" sing N N 190 G "C5'" "C4'" sing N N 191 G "C5'" "H5'" sing N N 192 G "C5'" "H5''" sing N N 193 G "C4'" "O4'" sing N N 194 G "C4'" "C3'" sing N N 195 G "C4'" "H4'" sing N N 196 G "O4'" "C1'" sing N N 197 G "C3'" "O3'" sing N N 198 G "C3'" "C2'" sing N N 199 G "C3'" "H3'" sing N N 200 G "O3'" "HO3'" sing N N 201 G "C2'" "O2'" sing N N 202 G "C2'" "C1'" sing N N 203 G "C2'" "H2'" sing N N 204 G "O2'" "HO2'" sing N N 205 G "C1'" N9 sing N N 206 G "C1'" "H1'" sing N N 207 G N9 C8 sing Y N 208 G N9 C4 sing Y N 209 G C8 N7 doub Y N 210 G C8 H8 sing N N 211 G N7 C5 sing Y N 212 G C5 C6 sing N N 213 G C5 C4 doub Y N 214 G C6 O6 doub N N 215 G C6 N1 sing N N 216 G N1 C2 sing N N 217 G N1 H1 sing N N 218 G C2 N2 sing N N 219 G C2 N3 doub N N 220 G N2 H21 sing N N 221 G N2 H22 sing N N 222 G N3 C4 sing N N 223 GLN N CA sing N N 224 GLN N H sing N N 225 GLN N H2 sing N N 226 GLN CA C sing N N 227 GLN CA CB sing N N 228 GLN CA HA sing N N 229 GLN C O doub N N 230 GLN C OXT sing N N 231 GLN CB CG sing N N 232 GLN CB HB2 sing N N 233 GLN CB HB3 sing N N 234 GLN CG CD sing N N 235 GLN CG HG2 sing N N 236 GLN CG HG3 sing N N 237 GLN CD OE1 doub N N 238 GLN CD NE2 sing N N 239 GLN NE2 HE21 sing N N 240 GLN NE2 HE22 sing N N 241 GLN OXT HXT sing N N 242 GLU N CA sing N N 243 GLU N H sing N N 244 GLU N H2 sing N N 245 GLU CA C sing N N 246 GLU CA CB sing N N 247 GLU CA HA sing N N 248 GLU C O doub N N 249 GLU C OXT sing N N 250 GLU CB CG sing N N 251 GLU CB HB2 sing N N 252 GLU CB HB3 sing N N 253 GLU CG CD sing N N 254 GLU CG HG2 sing N N 255 GLU CG HG3 sing N N 256 GLU CD OE1 doub N N 257 GLU CD OE2 sing N N 258 GLU OE2 HE2 sing N N 259 GLU OXT HXT sing N N 260 GLY N CA sing N N 261 GLY N H sing N N 262 GLY N H2 sing N N 263 GLY CA C sing N N 264 GLY CA HA2 sing N N 265 GLY CA HA3 sing N N 266 GLY C O doub N N 267 GLY C OXT sing N N 268 GLY OXT HXT sing N N 269 HIS N CA sing N N 270 HIS N H sing N N 271 HIS N H2 sing N N 272 HIS CA C sing N N 273 HIS CA CB sing N N 274 HIS CA HA sing N N 275 HIS C O doub N N 276 HIS C OXT sing N N 277 HIS CB CG sing N N 278 HIS CB HB2 sing N N 279 HIS CB HB3 sing N N 280 HIS CG ND1 sing Y N 281 HIS CG CD2 doub Y N 282 HIS ND1 CE1 doub Y N 283 HIS ND1 HD1 sing N N 284 HIS CD2 NE2 sing Y N 285 HIS CD2 HD2 sing N N 286 HIS CE1 NE2 sing Y N 287 HIS CE1 HE1 sing N N 288 HIS NE2 HE2 sing N N 289 HIS OXT HXT sing N N 290 ILE N CA sing N N 291 ILE N H sing N N 292 ILE N H2 sing N N 293 ILE CA C sing N N 294 ILE CA CB sing N N 295 ILE CA HA sing N N 296 ILE C O doub N N 297 ILE C OXT sing N N 298 ILE CB CG1 sing N N 299 ILE CB CG2 sing N N 300 ILE CB HB sing N N 301 ILE CG1 CD1 sing N N 302 ILE CG1 HG12 sing N N 303 ILE CG1 HG13 sing N N 304 ILE CG2 HG21 sing N N 305 ILE CG2 HG22 sing N N 306 ILE CG2 HG23 sing N N 307 ILE CD1 HD11 sing N N 308 ILE CD1 HD12 sing N N 309 ILE CD1 HD13 sing N N 310 ILE OXT HXT sing N N 311 LEU N CA sing N N 312 LEU N H sing N N 313 LEU N H2 sing N N 314 LEU CA C sing N N 315 LEU CA CB sing N N 316 LEU CA HA sing N N 317 LEU C O doub N N 318 LEU C OXT sing N N 319 LEU CB CG sing N N 320 LEU CB HB2 sing N N 321 LEU CB HB3 sing N N 322 LEU CG CD1 sing N N 323 LEU CG CD2 sing N N 324 LEU CG HG sing N N 325 LEU CD1 HD11 sing N N 326 LEU CD1 HD12 sing N N 327 LEU CD1 HD13 sing N N 328 LEU CD2 HD21 sing N N 329 LEU CD2 HD22 sing N N 330 LEU CD2 HD23 sing N N 331 LEU OXT HXT sing N N 332 LYS N CA sing N N 333 LYS N H sing N N 334 LYS N H2 sing N N 335 LYS CA C sing N N 336 LYS CA CB sing N N 337 LYS CA HA sing N N 338 LYS C O doub N N 339 LYS C OXT sing N N 340 LYS CB CG sing N N 341 LYS CB HB2 sing N N 342 LYS CB HB3 sing N N 343 LYS CG CD sing N N 344 LYS CG HG2 sing N N 345 LYS CG HG3 sing N N 346 LYS CD CE sing N N 347 LYS CD HD2 sing N N 348 LYS CD HD3 sing N N 349 LYS CE NZ sing N N 350 LYS CE HE2 sing N N 351 LYS CE HE3 sing N N 352 LYS NZ HZ1 sing N N 353 LYS NZ HZ2 sing N N 354 LYS NZ HZ3 sing N N 355 LYS OXT HXT sing N N 356 MET N CA sing N N 357 MET N H sing N N 358 MET N H2 sing N N 359 MET CA C sing N N 360 MET CA CB sing N N 361 MET CA HA sing N N 362 MET C O doub N N 363 MET C OXT sing N N 364 MET CB CG sing N N 365 MET CB HB2 sing N N 366 MET CB HB3 sing N N 367 MET CG SD sing N N 368 MET CG HG2 sing N N 369 MET CG HG3 sing N N 370 MET SD CE sing N N 371 MET CE HE1 sing N N 372 MET CE HE2 sing N N 373 MET CE HE3 sing N N 374 MET OXT HXT sing N N 375 PHE N CA sing N N 376 PHE N H sing N N 377 PHE N H2 sing N N 378 PHE CA C sing N N 379 PHE CA CB sing N N 380 PHE CA HA sing N N 381 PHE C O doub N N 382 PHE C OXT sing N N 383 PHE CB CG sing N N 384 PHE CB HB2 sing N N 385 PHE CB HB3 sing N N 386 PHE CG CD1 doub Y N 387 PHE CG CD2 sing Y N 388 PHE CD1 CE1 sing Y N 389 PHE CD1 HD1 sing N N 390 PHE CD2 CE2 doub Y N 391 PHE CD2 HD2 sing N N 392 PHE CE1 CZ doub Y N 393 PHE CE1 HE1 sing N N 394 PHE CE2 CZ sing Y N 395 PHE CE2 HE2 sing N N 396 PHE CZ HZ sing N N 397 PHE OXT HXT sing N N 398 PRO N CA sing N N 399 PRO N CD sing N N 400 PRO N H sing N N 401 PRO CA C sing N N 402 PRO CA CB sing N N 403 PRO CA HA sing N N 404 PRO C O doub N N 405 PRO C OXT sing N N 406 PRO CB CG sing N N 407 PRO CB HB2 sing N N 408 PRO CB HB3 sing N N 409 PRO CG CD sing N N 410 PRO CG HG2 sing N N 411 PRO CG HG3 sing N N 412 PRO CD HD2 sing N N 413 PRO CD HD3 sing N N 414 PRO OXT HXT sing N N 415 SER N CA sing N N 416 SER N H sing N N 417 SER N H2 sing N N 418 SER CA C sing N N 419 SER CA CB sing N N 420 SER CA HA sing N N 421 SER C O doub N N 422 SER C OXT sing N N 423 SER CB OG sing N N 424 SER CB HB2 sing N N 425 SER CB HB3 sing N N 426 SER OG HG sing N N 427 SER OXT HXT sing N N 428 THR N CA sing N N 429 THR N H sing N N 430 THR N H2 sing N N 431 THR CA C sing N N 432 THR CA CB sing N N 433 THR CA HA sing N N 434 THR C O doub N N 435 THR C OXT sing N N 436 THR CB OG1 sing N N 437 THR CB CG2 sing N N 438 THR CB HB sing N N 439 THR OG1 HG1 sing N N 440 THR CG2 HG21 sing N N 441 THR CG2 HG22 sing N N 442 THR CG2 HG23 sing N N 443 THR OXT HXT sing N N 444 TRP N CA sing N N 445 TRP N H sing N N 446 TRP N H2 sing N N 447 TRP CA C sing N N 448 TRP CA CB sing N N 449 TRP CA HA sing N N 450 TRP C O doub N N 451 TRP C OXT sing N N 452 TRP CB CG sing N N 453 TRP CB HB2 sing N N 454 TRP CB HB3 sing N N 455 TRP CG CD1 doub Y N 456 TRP CG CD2 sing Y N 457 TRP CD1 NE1 sing Y N 458 TRP CD1 HD1 sing N N 459 TRP CD2 CE2 doub Y N 460 TRP CD2 CE3 sing Y N 461 TRP NE1 CE2 sing Y N 462 TRP NE1 HE1 sing N N 463 TRP CE2 CZ2 sing Y N 464 TRP CE3 CZ3 doub Y N 465 TRP CE3 HE3 sing N N 466 TRP CZ2 CH2 doub Y N 467 TRP CZ2 HZ2 sing N N 468 TRP CZ3 CH2 sing Y N 469 TRP CZ3 HZ3 sing N N 470 TRP CH2 HH2 sing N N 471 TRP OXT HXT sing N N 472 TYR N CA sing N N 473 TYR N H sing N N 474 TYR N H2 sing N N 475 TYR CA C sing N N 476 TYR CA CB sing N N 477 TYR CA HA sing N N 478 TYR C O doub N N 479 TYR C OXT sing N N 480 TYR CB CG sing N N 481 TYR CB HB2 sing N N 482 TYR CB HB3 sing N N 483 TYR CG CD1 doub Y N 484 TYR CG CD2 sing Y N 485 TYR CD1 CE1 sing Y N 486 TYR CD1 HD1 sing N N 487 TYR CD2 CE2 doub Y N 488 TYR CD2 HD2 sing N N 489 TYR CE1 CZ doub Y N 490 TYR CE1 HE1 sing N N 491 TYR CE2 CZ sing Y N 492 TYR CE2 HE2 sing N N 493 TYR CZ OH sing N N 494 TYR OH HH sing N N 495 TYR OXT HXT sing N N 496 U OP3 P sing N N 497 U OP3 HOP3 sing N N 498 U P OP1 doub N N 499 U P OP2 sing N N 500 U P "O5'" sing N N 501 U OP2 HOP2 sing N N 502 U "O5'" "C5'" sing N N 503 U "C5'" "C4'" sing N N 504 U "C5'" "H5'" sing N N 505 U "C5'" "H5''" sing N N 506 U "C4'" "O4'" sing N N 507 U "C4'" "C3'" sing N N 508 U "C4'" "H4'" sing N N 509 U "O4'" "C1'" sing N N 510 U "C3'" "O3'" sing N N 511 U "C3'" "C2'" sing N N 512 U "C3'" "H3'" sing N N 513 U "O3'" "HO3'" sing N N 514 U "C2'" "O2'" sing N N 515 U "C2'" "C1'" sing N N 516 U "C2'" "H2'" sing N N 517 U "O2'" "HO2'" sing N N 518 U "C1'" N1 sing N N 519 U "C1'" "H1'" sing N N 520 U N1 C2 sing N N 521 U N1 C6 sing N N 522 U C2 O2 doub N N 523 U C2 N3 sing N N 524 U N3 C4 sing N N 525 U N3 H3 sing N N 526 U C4 O4 doub N N 527 U C4 C5 sing N N 528 U C5 C6 doub N N 529 U C5 H5 sing N N 530 U C6 H6 sing N N 531 VAL N CA sing N N 532 VAL N H sing N N 533 VAL N H2 sing N N 534 VAL CA C sing N N 535 VAL CA CB sing N N 536 VAL CA HA sing N N 537 VAL C O doub N N 538 VAL C OXT sing N N 539 VAL CB CG1 sing N N 540 VAL CB CG2 sing N N 541 VAL CB HB sing N N 542 VAL CG1 HG11 sing N N 543 VAL CG1 HG12 sing N N 544 VAL CG1 HG13 sing N N 545 VAL CG2 HG21 sing N N 546 VAL CG2 HG22 sing N N 547 VAL CG2 HG23 sing N N 548 VAL OXT HXT sing N N 549 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3QRQ 'double helix' 3QRQ 'a-form double helix' 3QRQ 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B C 3 1_555 B DG 18 3_555 1.065 -0.236 -0.088 1.082 0.374 6.114 1 B_C6:DG21_B B 6 ? B 21 ? 19 1 1 B C 4 1_555 B G 17 3_555 0.670 0.129 -0.172 16.648 -0.204 9.264 2 B_C7:G20_B B 7 ? B 20 ? 19 1 1 B C 5 1_555 B G 16 3_555 0.220 -0.122 -0.552 13.820 -20.194 8.887 3 B_C8:G19_B B 8 ? B 19 ? 19 1 1 B C 6 1_555 B G 15 3_555 0.536 -0.299 0.163 -0.653 1.239 -1.771 4 B_C9:G18_B B 9 ? B 18 ? 19 1 1 B A 7 1_555 B U 14 3_555 -0.223 0.033 0.209 5.382 -8.236 3.375 5 B_A10:U17_B B 10 ? B 17 ? 20 1 1 B C 8 1_555 B G 13 3_555 0.518 -0.147 -0.023 10.549 -22.751 -1.376 6 B_C11:G16_B B 11 ? B 16 ? 19 1 1 B G 9 1_555 B U 12 3_555 -2.138 -0.354 0.118 8.423 2.161 -3.318 7 B_G12:U15_B B 12 ? B 15 ? 28 1 1 B C 10 1_555 B G 11 3_555 -1.055 0.105 -0.446 14.994 -11.177 0.464 8 B_C13:G14_B B 13 ? B 14 ? 19 1 1 B G 11 1_555 B C 10 3_555 1.055 0.105 -0.446 -14.994 -11.177 0.464 9 B_G14:C13_B B 14 ? B 13 ? 19 1 1 B U 12 1_555 B G 9 3_555 2.138 -0.354 0.118 -8.423 2.161 -3.318 10 B_U15:G12_B B 15 ? B 12 ? 28 1 1 B G 13 1_555 B C 8 3_555 -0.518 -0.147 -0.023 -10.549 -22.751 -1.376 11 B_G16:C11_B B 16 ? B 11 ? 19 1 1 B U 14 1_555 B A 7 3_555 0.223 0.033 0.209 -5.382 -8.236 3.375 12 B_U17:A10_B B 17 ? B 10 ? 20 1 1 B G 15 1_555 B C 6 3_555 -0.536 -0.299 0.163 0.653 1.239 -1.771 13 B_G18:C9_B B 18 ? B 9 ? 19 1 1 B G 16 1_555 B C 5 3_555 -0.220 -0.122 -0.552 -13.820 -20.194 8.887 14 B_G19:C8_B B 19 ? B 8 ? 19 1 1 B G 17 1_555 B C 4 3_555 -0.670 0.129 -0.172 -16.648 -0.204 9.264 15 B_G20:C7_B B 20 ? B 7 ? 19 1 1 B DG 18 1_555 B C 3 3_555 -1.065 -0.236 -0.088 -1.082 0.374 6.114 16 B_DG21:C6_B B 21 ? B 6 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B C 3 1_555 B DG 18 3_555 B C 4 1_555 B G 17 3_555 -0.810 -2.309 3.129 -3.852 -1.598 20.952 -5.575 0.605 3.385 -4.338 10.460 21.359 1 BB_C6C7:G20DG21_BB B 6 ? B 21 ? B 7 ? B 20 ? 1 B C 4 1_555 B G 17 3_555 B C 5 1_555 B G 16 3_555 -0.180 -1.826 3.424 6.623 2.035 28.808 -4.012 1.784 3.171 4.017 -13.073 29.612 2 BB_C7C8:G19G20_BB B 7 ? B 20 ? B 8 ? B 19 ? 1 B C 5 1_555 B G 16 3_555 B C 6 1_555 B G 15 3_555 -0.798 -2.099 3.620 -6.220 12.949 30.635 -5.731 0.357 2.650 22.989 11.043 33.763 3 BB_C8C9:G18G19_BB B 8 ? B 19 ? B 9 ? B 18 ? 1 B C 6 1_555 B G 15 3_555 B A 7 1_555 B U 14 3_555 -0.201 -1.747 3.177 1.213 1.559 27.262 -4.068 0.713 3.063 3.303 -2.569 27.332 4 BB_C9A10:U17G18_BB B 9 ? B 18 ? B 10 ? B 17 ? 1 B A 7 1_555 B U 14 3_555 B C 8 1_555 B G 13 3_555 0.410 -1.889 3.250 4.290 -2.541 33.605 -2.818 0.001 3.405 -4.365 -7.370 33.962 5 BB_A10C11:G16U17_BB B 10 ? B 17 ? B 11 ? B 16 ? 1 B C 8 1_555 B G 13 3_555 B G 9 1_555 B U 12 3_555 -0.593 -3.378 4.049 -6.920 -10.518 5.598 5.295 -10.277 4.524 -55.238 36.341 13.774 6 BB_C11G12:U15G16_BB B 11 ? B 16 ? B 12 ? B 15 ? 1 B G 9 1_555 B U 12 3_555 B C 10 1_555 B G 11 3_555 -0.035 -1.560 3.117 2.151 4.312 34.812 -3.180 0.354 2.902 7.164 -3.574 35.134 7 BB_G12C13:G14U15_BB B 12 ? B 15 ? B 13 ? B 14 ? 1 B C 10 1_555 B G 11 3_555 B G 11 1_555 B C 10 3_555 0.000 -1.868 4.092 0.000 12.217 45.507 -3.530 0.000 3.507 15.466 0.000 47.034 8 BB_C13G14:C13G14_BB B 13 ? B 14 ? B 14 ? B 13 ? 1 B G 11 1_555 B C 10 3_555 B U 12 1_555 B G 9 3_555 0.035 -1.560 3.117 -2.151 4.312 34.812 -3.180 -0.354 2.902 7.164 3.574 35.134 9 BB_G14U15:G12C13_BB B 14 ? B 13 ? B 15 ? B 12 ? 1 B U 12 1_555 B G 9 3_555 B G 13 1_555 B C 8 3_555 0.593 -3.378 4.049 6.920 -10.518 5.599 5.295 10.277 4.524 -55.238 -36.341 13.774 10 BB_U15G16:C11G12_BB B 15 ? B 12 ? B 16 ? B 11 ? 1 B G 13 1_555 B C 8 3_555 B U 14 1_555 B A 7 3_555 -0.410 -1.889 3.250 -4.290 -2.541 33.605 -2.818 -0.001 3.405 -4.365 7.370 33.962 11 BB_G16U17:A10C11_BB B 16 ? B 11 ? B 17 ? B 10 ? 1 B U 14 1_555 B A 7 3_555 B G 15 1_555 B C 6 3_555 0.201 -1.747 3.177 -1.213 1.559 27.262 -4.068 -0.713 3.063 3.303 2.569 27.332 12 BB_U17G18:C9A10_BB B 17 ? B 10 ? B 18 ? B 9 ? 1 B G 15 1_555 B C 6 3_555 B G 16 1_555 B C 5 3_555 0.798 -2.099 3.620 6.220 12.949 30.635 -5.731 -0.357 2.650 22.989 -11.043 33.763 13 BB_G18G19:C8C9_BB B 18 ? B 9 ? B 19 ? B 8 ? 1 B G 16 1_555 B C 5 3_555 B G 17 1_555 B C 4 3_555 0.180 -1.826 3.424 -6.623 2.035 28.808 -4.012 -1.784 3.171 4.017 13.073 29.612 14 BB_G19G20:C7C8_BB B 19 ? B 8 ? B 20 ? B 7 ? 1 B G 17 1_555 B C 4 3_555 B DG 18 1_555 B C 3 3_555 0.810 -2.309 3.129 3.852 -1.598 20.952 -5.575 -0.605 3.385 -4.338 -10.460 21.359 15 BB_G20DG21:C6C7_BB B 20 ? B 7 ? B 21 ? B 6 ? # _atom_sites.entry_id 3QRQ _atom_sites.fract_transf_matrix[1][1] 0.016260 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014512 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006327 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_