data_3QUG # _entry.id 3QUG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3QUG RCSB RCSB064117 WWPDB D_1000064117 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3QUH _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3QUG _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2011-02-24 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Moriwaki, Y.' 1 'Caaveiro, J.M.M.' 2 'Tsumoto, K.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Molecular basis of recognition of antibacterial porphyrins by heme-transporter IsdH-NEAT3 of Staphylococcus aureus.' Biochemistry 50 7311 7320 2011 BICHAW US 0006-2960 0033 ? 21797259 10.1021/bi200493h 1 ;Structural basis for multimeric heme complexation through a specific protein-heme interaction: the case of the third neat domain of IsdH from Staphylococcus aureus. ; J.Biol.Chem. 283 28649 28659 2008 JBCHA3 US 0021-9258 0071 ? 18667422 10.1074/jbc.M803383200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Moriwaki, Y.' 1 primary 'Caaveiro, J.M.M.' 2 primary 'Tanaka, Y.' 3 primary 'Tsutsumi, H.' 4 primary 'Hamachi, I.' 5 primary 'Tsumoto, K.' 6 1 'Watanabe, M.' 7 1 'Tanaka, Y.' 8 1 'Suenaga, A.' 9 1 'Kuroda, M.' 10 1 'Yao, M.' 11 1 'Watanabe, N.' 12 1 'Arisaka, F.' 13 1 'Ohta, T.' 14 1 'Tanaka, I.' 15 1 'Tsumoto, K.' 16 # _cell.length_a 49.203 _cell.length_b 70.120 _cell.length_c 75.422 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3QUG _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 2 21 21' _symmetry.entry_id 3QUG _symmetry.Int_Tables_number 18 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Iron-regulated surface determinant protein H' 14437.006 2 ? ? 'NEAT domain (UNP RESIDUES 539-664)' ? 2 non-polymer syn 'PROTOPORPHYRIN IX CONTAINING GA' 630.365 2 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 5 water nat water 18.015 153 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Haptoglobin receptor A, Staphylococcus aureus surface protein I' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;PTNDQLTDLQEAHFVVFESEENSESVMDGFVEHPFYTATLNGQKYVVMKTKDDSYWKDLIVEGKRVTTVSKDPKNNSRTL IFPYIPDKAVYNAIVKVVVANIGYEGQYHVRIINQDINTKDDDTSQ ; _entity_poly.pdbx_seq_one_letter_code_can ;PTNDQLTDLQEAHFVVFESEENSESVMDGFVEHPFYTATLNGQKYVVMKTKDDSYWKDLIVEGKRVTTVSKDPKNNSRTL IFPYIPDKAVYNAIVKVVVANIGYEGQYHVRIINQDINTKDDDTSQ ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 THR n 1 3 ASN n 1 4 ASP n 1 5 GLN n 1 6 LEU n 1 7 THR n 1 8 ASP n 1 9 LEU n 1 10 GLN n 1 11 GLU n 1 12 ALA n 1 13 HIS n 1 14 PHE n 1 15 VAL n 1 16 VAL n 1 17 PHE n 1 18 GLU n 1 19 SER n 1 20 GLU n 1 21 GLU n 1 22 ASN n 1 23 SER n 1 24 GLU n 1 25 SER n 1 26 VAL n 1 27 MET n 1 28 ASP n 1 29 GLY n 1 30 PHE n 1 31 VAL n 1 32 GLU n 1 33 HIS n 1 34 PRO n 1 35 PHE n 1 36 TYR n 1 37 THR n 1 38 ALA n 1 39 THR n 1 40 LEU n 1 41 ASN n 1 42 GLY n 1 43 GLN n 1 44 LYS n 1 45 TYR n 1 46 VAL n 1 47 VAL n 1 48 MET n 1 49 LYS n 1 50 THR n 1 51 LYS n 1 52 ASP n 1 53 ASP n 1 54 SER n 1 55 TYR n 1 56 TRP n 1 57 LYS n 1 58 ASP n 1 59 LEU n 1 60 ILE n 1 61 VAL n 1 62 GLU n 1 63 GLY n 1 64 LYS n 1 65 ARG n 1 66 VAL n 1 67 THR n 1 68 THR n 1 69 VAL n 1 70 SER n 1 71 LYS n 1 72 ASP n 1 73 PRO n 1 74 LYS n 1 75 ASN n 1 76 ASN n 1 77 SER n 1 78 ARG n 1 79 THR n 1 80 LEU n 1 81 ILE n 1 82 PHE n 1 83 PRO n 1 84 TYR n 1 85 ILE n 1 86 PRO n 1 87 ASP n 1 88 LYS n 1 89 ALA n 1 90 VAL n 1 91 TYR n 1 92 ASN n 1 93 ALA n 1 94 ILE n 1 95 VAL n 1 96 LYS n 1 97 VAL n 1 98 VAL n 1 99 VAL n 1 100 ALA n 1 101 ASN n 1 102 ILE n 1 103 GLY n 1 104 TYR n 1 105 GLU n 1 106 GLY n 1 107 GLN n 1 108 TYR n 1 109 HIS n 1 110 VAL n 1 111 ARG n 1 112 ILE n 1 113 ILE n 1 114 ASN n 1 115 GLN n 1 116 ASP n 1 117 ILE n 1 118 ASN n 1 119 THR n 1 120 LYS n 1 121 ASP n 1 122 ASP n 1 123 ASP n 1 124 THR n 1 125 SER n 1 126 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'harA, isdH, IsdH-NEAT3, sasI, SAV1731' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'Mu50, ATCC 700699' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Staphylococcus aureus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 158878 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta2(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ISDH_STAAM _struct_ref.pdbx_db_accession Q931P4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PTNDQLTDLQEAHFVVFESEENSESVMDGFVEHPFYTATLNGQKYVVMKTKDDSYWKDLIVEGKRVTTVSKDPKNNSRTL IFPYIPDKAVYNAIVKVVVANIGYEGQYHVRIINQDINTKDDDTSQ ; _struct_ref.pdbx_align_begin 539 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3QUG A 1 ? 126 ? Q931P4 539 ? 664 ? 539 664 2 1 3QUG B 1 ? 126 ? Q931P4 539 ? 664 ? 539 664 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GIX non-polymer . 'PROTOPORPHYRIN IX CONTAINING GA' ? 'C34 H32 Ga N4 O4 5' 630.365 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3QUG _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity 0.823 _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.25 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 45.41 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 4.2 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details ;PEG-MME 2000 (25-29%), Sodium Acetate/Acetic Acid 0.1M, Ammonium Sulfate 0.2M, pH 4.2, VAPOR DIFFUSION, HANGING DROP, temperature 293K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2011-02-07 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Numerical link type Si(111) double crystal monochromator, liquid nitrogen cooling' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE AR-NW12A' _diffrn_source.pdbx_wavelength_list 1.000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline AR-NW12A # _reflns.entry_id 3QUG _reflns.d_resolution_high 1.700 _reflns.d_resolution_low 51.3500 _reflns.number_obs 28690 _reflns.pdbx_Rmerge_I_obs 0.089 _reflns.pdbx_netI_over_sigmaI 8.800 _reflns.pdbx_chi_squared 1.061 _reflns.pdbx_redundancy 6.700 _reflns.percent_possible_obs 97.800 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I -3 _reflns.number_all 28690 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.700 1.760 ? ? ? ? 0.510 ? ? 1.021 4.200 ? ? ? 2398 ? ? ? ? 83.800 ? ? 1 1 1.760 1.830 ? ? ? ? 0.486 ? ? 1.049 5.600 ? ? ? 2743 ? ? ? ? 94.900 ? ? 2 1 1.830 1.910 ? ? ? ? 0.414 ? ? 1.047 6.700 ? ? ? 2863 ? ? ? ? 99.400 ? ? 3 1 1.910 2.020 ? ? ? ? 0.304 ? ? 1.100 7.100 ? ? ? 2884 ? ? ? ? 100.000 ? ? 4 1 2.020 2.140 ? ? ? ? 0.225 ? ? 1.107 7.200 ? ? ? 2927 ? ? ? ? 100.000 ? ? 5 1 2.140 2.310 ? ? ? ? 0.183 ? ? 1.057 7.300 ? ? ? 2903 ? ? ? ? 100.000 ? ? 6 1 2.310 2.540 ? ? ? ? 0.140 ? ? 1.094 7.300 ? ? ? 2910 ? ? ? ? 100.000 ? ? 7 1 2.540 2.910 ? ? ? ? 0.105 ? ? 1.082 7.200 ? ? ? 2965 ? ? ? ? 100.000 ? ? 8 1 2.910 3.660 ? ? ? ? 0.063 ? ? 1.031 7.200 ? ? ? 2970 ? ? ? ? 100.000 ? ? 9 1 3.660 50.000 ? ? ? ? 0.043 ? ? 0.995 6.800 ? ? ? 3127 ? ? ? ? 99.600 ? ? 10 1 # _refine.entry_id 3QUG _refine.ls_d_res_high 1.7000 _refine.ls_d_res_low 50.000 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 97.0600 _refine.ls_number_reflns_obs 28515 _refine.ls_number_reflns_all 28515 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES' _refine.ls_R_factor_all 0.2155 _refine.ls_R_factor_obs 0.2155 _refine.ls_R_factor_R_work 0.2137 _refine.ls_wR_factor_R_work 0.2268 _refine.ls_R_factor_R_free 0.2570 _refine.ls_wR_factor_R_free 0.2700 _refine.ls_percent_reflns_R_free 4.1000 _refine.ls_number_reflns_R_free 1180 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 29.9262 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -2.5000 _refine.aniso_B[2][2] 5.6800 _refine.aniso_B[3][3] -3.1800 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9670 _refine.correlation_coeff_Fo_to_Fc_free 0.9460 _refine.overall_SU_R_Cruickshank_DPI 0.1269 _refine.overall_SU_R_free 0.1261 _refine.pdbx_overall_ESU_R_Free 0.1260 _refine.overall_SU_ML 0.1230 _refine.overall_SU_B 4.0780 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 2Z6F _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.6549 _refine.B_iso_max 62.770 _refine.B_iso_min 14.150 _refine.occupancy_max 1.000 _refine.occupancy_min 0.400 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1834 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 108 _refine_hist.number_atoms_solvent 153 _refine_hist.number_atoms_total 2095 _refine_hist.d_res_high 1.7000 _refine_hist.d_res_low 50.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2076 0.018 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2861 2.023 2.070 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 246 6.795 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 103 37.909 25.049 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 344 15.702 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 8 18.889 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 299 0.131 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1596 0.009 0.021 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1159 1.063 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1914 1.781 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 917 2.869 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 936 4.371 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.7000 _refine_ls_shell.d_res_low 1.7440 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 77.9200 _refine_ls_shell.number_reflns_R_work 1582 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.3590 _refine_ls_shell.R_factor_R_free 0.3880 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 70 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1652 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 3QUG _struct.title 'Structure of heme transport protein IsdH-NEAT3 from S. aureus in complex with Gallium-porphyrin' _struct.pdbx_descriptor 'Iron-regulated surface determinant protein H' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3QUG _struct_keywords.text ;Gallium, Metalloporphyrin, Metal selectivity, NEAT Domain, Heme Binding, Heme Transport, Heme, Hemin, PPIX, protoporphyrin IX, Cell wall, HEME-BINDING PROTEIN ; _struct_keywords.pdbx_keywords 'HEME-BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 2 ? G N N 3 ? H N N 4 ? I N N 5 ? J N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 25 ? PHE A 30 ? SER A 563 PHE A 568 1 ? 6 HELX_P HELX_P2 2 ASP A 52 ? SER A 54 ? ASP A 590 SER A 592 5 ? 3 HELX_P HELX_P3 3 PRO A 73 ? ASN A 76 ? PRO A 611 ASN A 614 5 ? 4 HELX_P HELX_P4 4 ALA A 100 ? GLY A 103 ? ALA A 638 GLY A 641 5 ? 4 HELX_P HELX_P5 5 SER B 25 ? PHE B 30 ? SER B 563 PHE B 568 1 ? 6 HELX_P HELX_P6 6 ASP B 52 ? SER B 54 ? ASP B 590 SER B 592 5 ? 3 HELX_P HELX_P7 7 PRO B 73 ? ASN B 76 ? PRO B 611 ASN B 614 5 ? 4 HELX_P HELX_P8 8 ALA B 100 ? GLY B 103 ? ALA B 638 GLY B 641 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A TYR 104 OH ? ? ? 1_555 C GIX . GA ? ? A TYR 642 A GIX 700 1_555 ? ? ? ? ? ? ? 1.868 ? metalc2 metalc ? ? B TYR 104 OH ? ? ? 1_555 F GIX . GA ? ? B TYR 642 B GIX 700 1_555 ? ? ? ? ? ? ? 2.010 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 HIS 33 A . ? HIS 571 A PRO 34 A ? PRO 572 A 1 1.78 2 HIS 33 B . ? HIS 571 B PRO 34 B ? PRO 572 B 1 2.45 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? C ? 5 ? D ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 7 ? ALA A 12 ? THR A 545 ALA A 550 A 2 PHE A 35 ? LEU A 40 ? PHE A 573 LEU A 578 A 3 GLN A 43 ? LYS A 49 ? GLN A 581 LYS A 587 A 4 SER A 77 ? PRO A 83 ? SER A 615 PRO A 621 A 5 THR A 67 ? ASP A 72 ? THR A 605 ASP A 610 B 1 PHE A 14 ? GLU A 18 ? PHE A 552 GLU A 556 B 2 TYR A 104 ? ASN A 114 ? TYR A 642 ASN A 652 B 3 VAL A 90 ? VAL A 99 ? VAL A 628 VAL A 637 B 4 TRP A 56 ? VAL A 61 ? TRP A 594 VAL A 599 B 5 LYS A 64 ? ARG A 65 ? LYS A 602 ARG A 603 C 1 THR B 7 ? ALA B 12 ? THR B 545 ALA B 550 C 2 PHE B 35 ? LEU B 40 ? PHE B 573 LEU B 578 C 3 GLN B 43 ? LYS B 49 ? GLN B 581 LYS B 587 C 4 SER B 77 ? PRO B 83 ? SER B 615 PRO B 621 C 5 THR B 67 ? ASP B 72 ? THR B 605 ASP B 610 D 1 PHE B 14 ? GLU B 18 ? PHE B 552 GLU B 556 D 2 TYR B 104 ? ASN B 114 ? TYR B 642 ASN B 652 D 3 VAL B 90 ? VAL B 99 ? VAL B 628 VAL B 637 D 4 TRP B 56 ? VAL B 61 ? TRP B 594 VAL B 599 D 5 LYS B 64 ? ARG B 65 ? LYS B 602 ARG B 603 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 7 ? N THR A 545 O THR A 39 ? O THR A 577 A 2 3 N TYR A 36 ? N TYR A 574 O VAL A 47 ? O VAL A 585 A 3 4 N MET A 48 ? N MET A 586 O LEU A 80 ? O LEU A 618 A 4 5 O SER A 77 ? O SER A 615 N ASP A 72 ? N ASP A 610 B 1 2 N PHE A 17 ? N PHE A 555 O ARG A 111 ? O ARG A 649 B 2 3 O TYR A 104 ? O TYR A 642 N VAL A 99 ? N VAL A 637 B 3 4 O ILE A 94 ? O ILE A 632 N ILE A 60 ? N ILE A 598 B 4 5 N VAL A 61 ? N VAL A 599 O LYS A 64 ? O LYS A 602 C 1 2 N THR B 7 ? N THR B 545 O THR B 39 ? O THR B 577 C 2 3 N TYR B 36 ? N TYR B 574 O VAL B 47 ? O VAL B 585 C 3 4 N MET B 48 ? N MET B 586 O LEU B 80 ? O LEU B 618 C 4 5 O SER B 77 ? O SER B 615 N ASP B 72 ? N ASP B 610 D 1 2 N PHE B 17 ? N PHE B 555 O ARG B 111 ? O ARG B 649 D 2 3 O TYR B 104 ? O TYR B 642 N VAL B 99 ? N VAL B 637 D 3 4 O LYS B 96 ? O LYS B 634 N LYS B 57 ? N LYS B 595 D 4 5 N VAL B 61 ? N VAL B 599 O LYS B 64 ? O LYS B 602 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 15 'BINDING SITE FOR RESIDUE GIX A 700' AC2 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE SO4 A 1' AC3 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE GOL A 11' AC4 Software ? ? ? ? 17 'BINDING SITE FOR RESIDUE GIX B 700' AC5 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE SO4 B 2' AC6 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE GOL B 12' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 15 HOH I . ? HOH A 4 . ? 1_555 ? 2 AC1 15 HOH I . ? HOH A 79 . ? 1_555 ? 3 AC1 15 GLU A 18 ? GLU A 556 . ? 1_555 ? 4 AC1 15 SER A 25 ? SER A 563 . ? 1_555 ? 5 AC1 15 VAL A 26 ? VAL A 564 . ? 1_555 ? 6 AC1 15 PHE A 30 ? PHE A 568 . ? 1_555 ? 7 AC1 15 GLY A 42 ? GLY A 580 . ? 4_544 ? 8 AC1 15 TRP A 56 ? TRP A 594 . ? 1_555 ? 9 AC1 15 VAL A 97 ? VAL A 635 . ? 1_555 ? 10 AC1 15 ILE A 102 ? ILE A 640 . ? 1_555 ? 11 AC1 15 TYR A 104 ? TYR A 642 . ? 1_555 ? 12 AC1 15 TYR A 108 ? TYR A 646 . ? 1_555 ? 13 AC1 15 VAL A 110 ? VAL A 648 . ? 1_555 ? 14 AC1 15 VAL B 26 ? VAL B 564 . ? 1_555 ? 15 AC1 15 GIX F . ? GIX B 700 . ? 1_555 ? 16 AC2 7 HOH I . ? HOH A 40 . ? 1_555 ? 17 AC2 7 HOH I . ? HOH A 120 . ? 1_555 ? 18 AC2 7 GLU A 32 ? GLU A 570 . ? 1_555 ? 19 AC2 7 HIS A 33 ? HIS A 571 . ? 1_555 ? 20 AC2 7 LYS A 51 ? LYS A 589 . ? 1_555 ? 21 AC2 7 HOH J . ? HOH B 11 . ? 4_645 ? 22 AC2 7 LYS B 74 ? LYS B 612 . ? 2_555 ? 23 AC3 7 ASP A 53 ? ASP A 591 . ? 1_555 ? 24 AC3 7 TRP A 56 ? TRP A 594 . ? 1_555 ? 25 AC3 7 LYS A 57 ? LYS A 595 . ? 1_555 ? 26 AC3 7 ASP A 58 ? ASP A 596 . ? 1_555 ? 27 AC3 7 VAL A 66 ? VAL A 604 . ? 1_555 ? 28 AC3 7 ARG A 78 ? ARG A 616 . ? 1_555 ? 29 AC3 7 LEU A 80 ? LEU A 618 . ? 1_555 ? 30 AC4 17 VAL A 26 ? VAL A 564 . ? 1_555 ? 31 AC4 17 GIX C . ? GIX A 700 . ? 1_555 ? 32 AC4 17 HOH J . ? HOH B 8 . ? 1_555 ? 33 AC4 17 HOH J . ? HOH B 84 . ? 1_555 ? 34 AC4 17 HOH J . ? HOH B 136 . ? 1_555 ? 35 AC4 17 GLU B 18 ? GLU B 556 . ? 1_555 ? 36 AC4 17 SER B 25 ? SER B 563 . ? 1_555 ? 37 AC4 17 VAL B 26 ? VAL B 564 . ? 1_555 ? 38 AC4 17 PHE B 30 ? PHE B 568 . ? 1_555 ? 39 AC4 17 GLY B 42 ? GLY B 580 . ? 4_645 ? 40 AC4 17 TYR B 55 ? TYR B 593 . ? 1_555 ? 41 AC4 17 TRP B 56 ? TRP B 594 . ? 1_555 ? 42 AC4 17 VAL B 97 ? VAL B 635 . ? 1_555 ? 43 AC4 17 ILE B 102 ? ILE B 640 . ? 1_555 ? 44 AC4 17 TYR B 104 ? TYR B 642 . ? 1_555 ? 45 AC4 17 TYR B 108 ? TYR B 646 . ? 1_555 ? 46 AC4 17 VAL B 110 ? VAL B 648 . ? 1_555 ? 47 AC5 6 HOH J . ? HOH B 26 . ? 1_555 ? 48 AC5 6 HOH J . ? HOH B 39 . ? 1_555 ? 49 AC5 6 VAL B 31 ? VAL B 569 . ? 1_555 ? 50 AC5 6 GLU B 32 ? GLU B 570 . ? 1_555 ? 51 AC5 6 HIS B 33 ? HIS B 571 . ? 1_555 ? 52 AC5 6 LYS B 51 ? LYS B 589 . ? 1_555 ? 53 AC6 6 ASP B 53 ? ASP B 591 . ? 1_555 ? 54 AC6 6 TRP B 56 ? TRP B 594 . ? 1_555 ? 55 AC6 6 LEU B 59 ? LEU B 597 . ? 1_555 ? 56 AC6 6 VAL B 66 ? VAL B 604 . ? 1_555 ? 57 AC6 6 ARG B 78 ? ARG B 616 . ? 1_555 ? 58 AC6 6 LEU B 80 ? LEU B 618 . ? 1_555 ? # _atom_sites.entry_id 3QUG _atom_sites.fract_transf_matrix[1][1] 0.020324 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014261 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013259 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C GA N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 539 ? ? ? A . n A 1 2 THR 2 540 ? ? ? A . n A 1 3 ASN 3 541 ? ? ? A . n A 1 4 ASP 4 542 ? ? ? A . n A 1 5 GLN 5 543 543 GLN GLN A . n A 1 6 LEU 6 544 544 LEU LEU A . n A 1 7 THR 7 545 545 THR THR A . n A 1 8 ASP 8 546 546 ASP ASP A . n A 1 9 LEU 9 547 547 LEU LEU A . n A 1 10 GLN 10 548 548 GLN GLN A . n A 1 11 GLU 11 549 549 GLU GLU A . n A 1 12 ALA 12 550 550 ALA ALA A . n A 1 13 HIS 13 551 551 HIS HIS A . n A 1 14 PHE 14 552 552 PHE PHE A . n A 1 15 VAL 15 553 553 VAL VAL A . n A 1 16 VAL 16 554 554 VAL VAL A . n A 1 17 PHE 17 555 555 PHE PHE A . n A 1 18 GLU 18 556 556 GLU GLU A . n A 1 19 SER 19 557 557 SER SER A . n A 1 20 GLU 20 558 558 GLU GLU A . n A 1 21 GLU 21 559 559 GLU GLU A . n A 1 22 ASN 22 560 560 ASN ASN A . n A 1 23 SER 23 561 561 SER SER A . n A 1 24 GLU 24 562 562 GLU GLU A . n A 1 25 SER 25 563 563 SER SER A . n A 1 26 VAL 26 564 564 VAL VAL A . n A 1 27 MET 27 565 565 MET MET A . n A 1 28 ASP 28 566 566 ASP ASP A . n A 1 29 GLY 29 567 567 GLY GLY A . n A 1 30 PHE 30 568 568 PHE PHE A . n A 1 31 VAL 31 569 569 VAL VAL A . n A 1 32 GLU 32 570 570 GLU GLU A . n A 1 33 HIS 33 571 571 HIS HIS A . n A 1 34 PRO 34 572 572 PRO PRO A . n A 1 35 PHE 35 573 573 PHE PHE A . n A 1 36 TYR 36 574 574 TYR TYR A . n A 1 37 THR 37 575 575 THR THR A . n A 1 38 ALA 38 576 576 ALA ALA A . n A 1 39 THR 39 577 577 THR THR A . n A 1 40 LEU 40 578 578 LEU LEU A . n A 1 41 ASN 41 579 579 ASN ASN A . n A 1 42 GLY 42 580 580 GLY GLY A . n A 1 43 GLN 43 581 581 GLN GLN A . n A 1 44 LYS 44 582 582 LYS LYS A . n A 1 45 TYR 45 583 583 TYR TYR A . n A 1 46 VAL 46 584 584 VAL VAL A . n A 1 47 VAL 47 585 585 VAL VAL A . n A 1 48 MET 48 586 586 MET MET A . n A 1 49 LYS 49 587 587 LYS LYS A . n A 1 50 THR 50 588 588 THR THR A . n A 1 51 LYS 51 589 589 LYS LYS A . n A 1 52 ASP 52 590 590 ASP ASP A . n A 1 53 ASP 53 591 591 ASP ASP A . n A 1 54 SER 54 592 592 SER SER A . n A 1 55 TYR 55 593 593 TYR TYR A . n A 1 56 TRP 56 594 594 TRP TRP A . n A 1 57 LYS 57 595 595 LYS LYS A . n A 1 58 ASP 58 596 596 ASP ASP A . n A 1 59 LEU 59 597 597 LEU LEU A . n A 1 60 ILE 60 598 598 ILE ILE A . n A 1 61 VAL 61 599 599 VAL VAL A . n A 1 62 GLU 62 600 600 GLU GLU A . n A 1 63 GLY 63 601 601 GLY GLY A . n A 1 64 LYS 64 602 602 LYS LYS A . n A 1 65 ARG 65 603 603 ARG ARG A . n A 1 66 VAL 66 604 604 VAL VAL A . n A 1 67 THR 67 605 605 THR THR A . n A 1 68 THR 68 606 606 THR THR A . n A 1 69 VAL 69 607 607 VAL VAL A . n A 1 70 SER 70 608 608 SER SER A . n A 1 71 LYS 71 609 609 LYS LYS A . n A 1 72 ASP 72 610 610 ASP ASP A . n A 1 73 PRO 73 611 611 PRO PRO A . n A 1 74 LYS 74 612 612 LYS LYS A . n A 1 75 ASN 75 613 613 ASN ASN A . n A 1 76 ASN 76 614 614 ASN ASN A . n A 1 77 SER 77 615 615 SER SER A . n A 1 78 ARG 78 616 616 ARG ARG A . n A 1 79 THR 79 617 617 THR THR A . n A 1 80 LEU 80 618 618 LEU LEU A . n A 1 81 ILE 81 619 619 ILE ILE A . n A 1 82 PHE 82 620 620 PHE PHE A . n A 1 83 PRO 83 621 621 PRO PRO A . n A 1 84 TYR 84 622 622 TYR TYR A . n A 1 85 ILE 85 623 623 ILE ILE A . n A 1 86 PRO 86 624 624 PRO PRO A . n A 1 87 ASP 87 625 625 ASP ASP A . n A 1 88 LYS 88 626 626 LYS LYS A . n A 1 89 ALA 89 627 627 ALA ALA A . n A 1 90 VAL 90 628 628 VAL VAL A . n A 1 91 TYR 91 629 629 TYR TYR A . n A 1 92 ASN 92 630 630 ASN ASN A . n A 1 93 ALA 93 631 631 ALA ALA A . n A 1 94 ILE 94 632 632 ILE ILE A . n A 1 95 VAL 95 633 633 VAL VAL A . n A 1 96 LYS 96 634 634 LYS LYS A . n A 1 97 VAL 97 635 635 VAL VAL A . n A 1 98 VAL 98 636 636 VAL VAL A . n A 1 99 VAL 99 637 637 VAL VAL A . n A 1 100 ALA 100 638 638 ALA ALA A . n A 1 101 ASN 101 639 639 ASN ASN A . n A 1 102 ILE 102 640 640 ILE ILE A . n A 1 103 GLY 103 641 641 GLY GLY A . n A 1 104 TYR 104 642 642 TYR TYR A . n A 1 105 GLU 105 643 643 GLU GLU A . n A 1 106 GLY 106 644 644 GLY GLY A . n A 1 107 GLN 107 645 645 GLN GLN A . n A 1 108 TYR 108 646 646 TYR TYR A . n A 1 109 HIS 109 647 647 HIS HIS A . n A 1 110 VAL 110 648 648 VAL VAL A . n A 1 111 ARG 111 649 649 ARG ARG A . n A 1 112 ILE 112 650 650 ILE ILE A . n A 1 113 ILE 113 651 651 ILE ILE A . n A 1 114 ASN 114 652 652 ASN ASN A . n A 1 115 GLN 115 653 653 GLN GLN A . n A 1 116 ASP 116 654 654 ASP ASP A . n A 1 117 ILE 117 655 655 ILE ILE A . n A 1 118 ASN 118 656 ? ? ? A . n A 1 119 THR 119 657 ? ? ? A . n A 1 120 LYS 120 658 ? ? ? A . n A 1 121 ASP 121 659 ? ? ? A . n A 1 122 ASP 122 660 ? ? ? A . n A 1 123 ASP 123 661 ? ? ? A . n A 1 124 THR 124 662 ? ? ? A . n A 1 125 SER 125 663 ? ? ? A . n A 1 126 GLN 126 664 ? ? ? A . n B 1 1 PRO 1 539 ? ? ? B . n B 1 2 THR 2 540 ? ? ? B . n B 1 3 ASN 3 541 ? ? ? B . n B 1 4 ASP 4 542 ? ? ? B . n B 1 5 GLN 5 543 543 GLN GLN B . n B 1 6 LEU 6 544 544 LEU LEU B . n B 1 7 THR 7 545 545 THR THR B . n B 1 8 ASP 8 546 546 ASP ASP B . n B 1 9 LEU 9 547 547 LEU LEU B . n B 1 10 GLN 10 548 548 GLN GLN B . n B 1 11 GLU 11 549 549 GLU GLU B . n B 1 12 ALA 12 550 550 ALA ALA B . n B 1 13 HIS 13 551 551 HIS HIS B . n B 1 14 PHE 14 552 552 PHE PHE B . n B 1 15 VAL 15 553 553 VAL VAL B . n B 1 16 VAL 16 554 554 VAL VAL B . n B 1 17 PHE 17 555 555 PHE PHE B . n B 1 18 GLU 18 556 556 GLU GLU B . n B 1 19 SER 19 557 557 SER SER B . n B 1 20 GLU 20 558 558 GLU GLU B . n B 1 21 GLU 21 559 559 GLU GLU B . n B 1 22 ASN 22 560 560 ASN ASN B . n B 1 23 SER 23 561 561 SER SER B . n B 1 24 GLU 24 562 562 GLU GLU B . n B 1 25 SER 25 563 563 SER SER B . n B 1 26 VAL 26 564 564 VAL VAL B . n B 1 27 MET 27 565 565 MET MET B . n B 1 28 ASP 28 566 566 ASP ASP B . n B 1 29 GLY 29 567 567 GLY GLY B . n B 1 30 PHE 30 568 568 PHE PHE B . n B 1 31 VAL 31 569 569 VAL VAL B . n B 1 32 GLU 32 570 570 GLU GLU B . n B 1 33 HIS 33 571 571 HIS HIS B . n B 1 34 PRO 34 572 572 PRO PRO B . n B 1 35 PHE 35 573 573 PHE PHE B . n B 1 36 TYR 36 574 574 TYR TYR B . n B 1 37 THR 37 575 575 THR THR B . n B 1 38 ALA 38 576 576 ALA ALA B . n B 1 39 THR 39 577 577 THR THR B . n B 1 40 LEU 40 578 578 LEU LEU B . n B 1 41 ASN 41 579 579 ASN ASN B . n B 1 42 GLY 42 580 580 GLY GLY B . n B 1 43 GLN 43 581 581 GLN GLN B . n B 1 44 LYS 44 582 582 LYS LYS B . n B 1 45 TYR 45 583 583 TYR TYR B . n B 1 46 VAL 46 584 584 VAL VAL B . n B 1 47 VAL 47 585 585 VAL VAL B . n B 1 48 MET 48 586 586 MET MET B . n B 1 49 LYS 49 587 587 LYS LYS B . n B 1 50 THR 50 588 588 THR THR B . n B 1 51 LYS 51 589 589 LYS LYS B . n B 1 52 ASP 52 590 590 ASP ASP B . n B 1 53 ASP 53 591 591 ASP ASP B . n B 1 54 SER 54 592 592 SER SER B . n B 1 55 TYR 55 593 593 TYR TYR B . n B 1 56 TRP 56 594 594 TRP TRP B . n B 1 57 LYS 57 595 595 LYS LYS B . n B 1 58 ASP 58 596 596 ASP ASP B . n B 1 59 LEU 59 597 597 LEU LEU B . n B 1 60 ILE 60 598 598 ILE ILE B . n B 1 61 VAL 61 599 599 VAL VAL B . n B 1 62 GLU 62 600 600 GLU GLU B . n B 1 63 GLY 63 601 601 GLY GLY B . n B 1 64 LYS 64 602 602 LYS LYS B . n B 1 65 ARG 65 603 603 ARG ARG B . n B 1 66 VAL 66 604 604 VAL VAL B . n B 1 67 THR 67 605 605 THR THR B . n B 1 68 THR 68 606 606 THR THR B . n B 1 69 VAL 69 607 607 VAL VAL B . n B 1 70 SER 70 608 608 SER SER B . n B 1 71 LYS 71 609 609 LYS LYS B . n B 1 72 ASP 72 610 610 ASP ASP B . n B 1 73 PRO 73 611 611 PRO PRO B . n B 1 74 LYS 74 612 612 LYS LYS B . n B 1 75 ASN 75 613 613 ASN ASN B . n B 1 76 ASN 76 614 614 ASN ASN B . n B 1 77 SER 77 615 615 SER SER B . n B 1 78 ARG 78 616 616 ARG ARG B . n B 1 79 THR 79 617 617 THR THR B . n B 1 80 LEU 80 618 618 LEU LEU B . n B 1 81 ILE 81 619 619 ILE ILE B . n B 1 82 PHE 82 620 620 PHE PHE B . n B 1 83 PRO 83 621 621 PRO PRO B . n B 1 84 TYR 84 622 622 TYR TYR B . n B 1 85 ILE 85 623 623 ILE ILE B . n B 1 86 PRO 86 624 624 PRO PRO B . n B 1 87 ASP 87 625 625 ASP ASP B . n B 1 88 LYS 88 626 626 LYS LYS B . n B 1 89 ALA 89 627 627 ALA ALA B . n B 1 90 VAL 90 628 628 VAL VAL B . n B 1 91 TYR 91 629 629 TYR TYR B . n B 1 92 ASN 92 630 630 ASN ASN B . n B 1 93 ALA 93 631 631 ALA ALA B . n B 1 94 ILE 94 632 632 ILE ILE B . n B 1 95 VAL 95 633 633 VAL VAL B . n B 1 96 LYS 96 634 634 LYS LYS B . n B 1 97 VAL 97 635 635 VAL VAL B . n B 1 98 VAL 98 636 636 VAL VAL B . n B 1 99 VAL 99 637 637 VAL VAL B . n B 1 100 ALA 100 638 638 ALA ALA B . n B 1 101 ASN 101 639 639 ASN ASN B . n B 1 102 ILE 102 640 640 ILE ILE B . n B 1 103 GLY 103 641 641 GLY GLY B . n B 1 104 TYR 104 642 642 TYR TYR B . n B 1 105 GLU 105 643 643 GLU GLU B . n B 1 106 GLY 106 644 644 GLY GLY B . n B 1 107 GLN 107 645 645 GLN GLN B . n B 1 108 TYR 108 646 646 TYR TYR B . n B 1 109 HIS 109 647 647 HIS HIS B . n B 1 110 VAL 110 648 648 VAL VAL B . n B 1 111 ARG 111 649 649 ARG ARG B . n B 1 112 ILE 112 650 650 ILE ILE B . n B 1 113 ILE 113 651 651 ILE ILE B . n B 1 114 ASN 114 652 652 ASN ASN B . n B 1 115 GLN 115 653 653 GLN GLN B . n B 1 116 ASP 116 654 654 ASP ASP B . n B 1 117 ILE 117 655 655 ILE ILE B . n B 1 118 ASN 118 656 ? ? ? B . n B 1 119 THR 119 657 ? ? ? B . n B 1 120 LYS 120 658 ? ? ? B . n B 1 121 ASP 121 659 ? ? ? B . n B 1 122 ASP 122 660 ? ? ? B . n B 1 123 ASP 123 661 ? ? ? B . n B 1 124 THR 124 662 ? ? ? B . n B 1 125 SER 125 663 ? ? ? B . n B 1 126 GLN 126 664 ? ? ? B . n # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,I 2 1 B,F,G,H,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 129 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id I _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OH ? A TYR 104 ? A TYR 642 ? 1_555 GA ? C GIX . ? A GIX 700 ? 1_555 NA ? C GIX . ? A GIX 700 ? 1_555 91.1 ? 2 OH ? A TYR 104 ? A TYR 642 ? 1_555 GA ? C GIX . ? A GIX 700 ? 1_555 NB ? C GIX . ? A GIX 700 ? 1_555 94.2 ? 3 NA ? C GIX . ? A GIX 700 ? 1_555 GA ? C GIX . ? A GIX 700 ? 1_555 NB ? C GIX . ? A GIX 700 ? 1_555 97.2 ? 4 OH ? A TYR 104 ? A TYR 642 ? 1_555 GA ? C GIX . ? A GIX 700 ? 1_555 NC ? C GIX . ? A GIX 700 ? 1_555 96.7 ? 5 NA ? C GIX . ? A GIX 700 ? 1_555 GA ? C GIX . ? A GIX 700 ? 1_555 NC ? C GIX . ? A GIX 700 ? 1_555 172.2 ? 6 NB ? C GIX . ? A GIX 700 ? 1_555 GA ? C GIX . ? A GIX 700 ? 1_555 NC ? C GIX . ? A GIX 700 ? 1_555 82.5 ? 7 OH ? A TYR 104 ? A TYR 642 ? 1_555 GA ? C GIX . ? A GIX 700 ? 1_555 ND ? C GIX . ? A GIX 700 ? 1_555 94.7 ? 8 NA ? C GIX . ? A GIX 700 ? 1_555 GA ? C GIX . ? A GIX 700 ? 1_555 ND ? C GIX . ? A GIX 700 ? 1_555 82.5 ? 9 NB ? C GIX . ? A GIX 700 ? 1_555 GA ? C GIX . ? A GIX 700 ? 1_555 ND ? C GIX . ? A GIX 700 ? 1_555 171.2 ? 10 NC ? C GIX . ? A GIX 700 ? 1_555 GA ? C GIX . ? A GIX 700 ? 1_555 ND ? C GIX . ? A GIX 700 ? 1_555 96.6 ? 11 OH ? B TYR 104 ? B TYR 642 ? 1_555 GA ? F GIX . ? B GIX 700 ? 1_555 NA ? F GIX . ? B GIX 700 ? 1_555 89.3 ? 12 OH ? B TYR 104 ? B TYR 642 ? 1_555 GA ? F GIX . ? B GIX 700 ? 1_555 NB ? F GIX . ? B GIX 700 ? 1_555 92.0 ? 13 NA ? F GIX . ? B GIX 700 ? 1_555 GA ? F GIX . ? B GIX 700 ? 1_555 NB ? F GIX . ? B GIX 700 ? 1_555 102.8 ? 14 OH ? B TYR 104 ? B TYR 642 ? 1_555 GA ? F GIX . ? B GIX 700 ? 1_555 NC ? F GIX . ? B GIX 700 ? 1_555 97.4 ? 15 NA ? F GIX . ? B GIX 700 ? 1_555 GA ? F GIX . ? B GIX 700 ? 1_555 NC ? F GIX . ? B GIX 700 ? 1_555 173.2 ? 16 NB ? F GIX . ? B GIX 700 ? 1_555 GA ? F GIX . ? B GIX 700 ? 1_555 NC ? F GIX . ? B GIX 700 ? 1_555 76.1 ? 17 OH ? B TYR 104 ? B TYR 642 ? 1_555 GA ? F GIX . ? B GIX 700 ? 1_555 ND ? F GIX . ? B GIX 700 ? 1_555 95.3 ? 18 NA ? F GIX . ? B GIX 700 ? 1_555 GA ? F GIX . ? B GIX 700 ? 1_555 ND ? F GIX . ? B GIX 700 ? 1_555 77.0 ? 19 NB ? F GIX . ? B GIX 700 ? 1_555 GA ? F GIX . ? B GIX 700 ? 1_555 ND ? F GIX . ? B GIX 700 ? 1_555 172.7 ? 20 NC ? F GIX . ? B GIX 700 ? 1_555 GA ? F GIX . ? B GIX 700 ? 1_555 ND ? F GIX . ? B GIX 700 ? 1_555 103.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-03-30 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-02-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' # _pdbx_phasing_MR.entry_id 3QUG _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor 38.490 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.500 _pdbx_phasing_MR.d_res_low_rotation 33.210 _pdbx_phasing_MR.d_res_high_translation 2.500 _pdbx_phasing_MR.d_res_low_translation 33.210 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHASER 2.1.4 'Tue Mar 9 14:58:00 2010' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 HKL-2000 . ? ? ? ? 'data collection' ? ? ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 92 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 93 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 NA ? A GIX 700 ? PLANAR . 2 1 NB ? A GIX 700 ? PLANAR . 3 1 ND ? A GIX 700 ? PLANAR . 4 1 NA ? B GIX 700 ? PLANAR . 5 1 NB ? B GIX 700 ? PLANAR . 6 1 ND ? B GIX 700 ? PLANAR . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A PRO 539 ? A PRO 1 2 1 Y 1 A THR 540 ? A THR 2 3 1 Y 1 A ASN 541 ? A ASN 3 4 1 Y 1 A ASP 542 ? A ASP 4 5 1 Y 1 A ASN 656 ? A ASN 118 6 1 Y 1 A THR 657 ? A THR 119 7 1 Y 1 A LYS 658 ? A LYS 120 8 1 Y 1 A ASP 659 ? A ASP 121 9 1 Y 1 A ASP 660 ? A ASP 122 10 1 Y 1 A ASP 661 ? A ASP 123 11 1 Y 1 A THR 662 ? A THR 124 12 1 Y 1 A SER 663 ? A SER 125 13 1 Y 1 A GLN 664 ? A GLN 126 14 1 Y 1 B PRO 539 ? B PRO 1 15 1 Y 1 B THR 540 ? B THR 2 16 1 Y 1 B ASN 541 ? B ASN 3 17 1 Y 1 B ASP 542 ? B ASP 4 18 1 Y 1 B ASN 656 ? B ASN 118 19 1 Y 1 B THR 657 ? B THR 119 20 1 Y 1 B LYS 658 ? B LYS 120 21 1 Y 1 B ASP 659 ? B ASP 121 22 1 Y 1 B ASP 660 ? B ASP 122 23 1 Y 1 B ASP 661 ? B ASP 123 24 1 Y 1 B THR 662 ? B THR 124 25 1 Y 1 B SER 663 ? B SER 125 26 1 Y 1 B GLN 664 ? B GLN 126 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PROTOPORPHYRIN IX CONTAINING GA' GIX 3 'SULFATE ION' SO4 4 GLYCEROL GOL 5 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GIX 1 700 700 GIX ZZZ A . D 3 SO4 1 1 1 SO4 SO4 A . E 4 GOL 1 11 11 GOL GOL A . F 2 GIX 1 700 700 GIX ZZZ B . G 3 SO4 1 2 2 SO4 SO4 B . H 4 GOL 1 12 12 GOL GOL B . I 5 HOH 1 4 4 HOH HOH A . I 5 HOH 2 6 6 HOH HOH A . I 5 HOH 3 9 9 HOH HOH A . I 5 HOH 4 12 12 HOH HOH A . I 5 HOH 5 13 13 HOH HOH A . I 5 HOH 6 14 14 HOH HOH A . I 5 HOH 7 17 17 HOH HOH A . I 5 HOH 8 19 19 HOH HOH A . I 5 HOH 9 20 20 HOH HOH A . I 5 HOH 10 21 21 HOH HOH A . I 5 HOH 11 23 23 HOH HOH A . I 5 HOH 12 24 24 HOH HOH A . I 5 HOH 13 25 25 HOH HOH A . I 5 HOH 14 27 27 HOH HOH A . I 5 HOH 15 28 28 HOH HOH A . I 5 HOH 16 29 29 HOH HOH A . I 5 HOH 17 30 30 HOH HOH A . I 5 HOH 18 31 31 HOH HOH A . I 5 HOH 19 33 33 HOH HOH A . I 5 HOH 20 34 34 HOH HOH A . I 5 HOH 21 35 35 HOH HOH A . I 5 HOH 22 38 38 HOH HOH A . I 5 HOH 23 40 40 HOH HOH A . I 5 HOH 24 41 41 HOH HOH A . I 5 HOH 25 42 42 HOH HOH A . I 5 HOH 26 45 45 HOH HOH A . I 5 HOH 27 46 46 HOH HOH A . I 5 HOH 28 47 47 HOH HOH A . I 5 HOH 29 48 48 HOH HOH A . I 5 HOH 30 50 50 HOH HOH A . I 5 HOH 31 51 51 HOH HOH A . I 5 HOH 32 53 53 HOH HOH A . I 5 HOH 33 63 63 HOH HOH A . I 5 HOH 34 65 65 HOH HOH A . I 5 HOH 35 67 67 HOH HOH A . I 5 HOH 36 68 68 HOH HOH A . I 5 HOH 37 70 70 HOH HOH A . I 5 HOH 38 77 77 HOH HOH A . I 5 HOH 39 79 79 HOH HOH A . I 5 HOH 40 80 80 HOH HOH A . I 5 HOH 41 81 81 HOH HOH A . I 5 HOH 42 82 82 HOH HOH A . I 5 HOH 43 85 85 HOH HOH A . I 5 HOH 44 86 86 HOH HOH A . I 5 HOH 45 87 87 HOH HOH A . I 5 HOH 46 91 91 HOH HOH A . I 5 HOH 47 96 96 HOH HOH A . I 5 HOH 48 104 104 HOH HOH A . I 5 HOH 49 105 105 HOH HOH A . I 5 HOH 50 109 109 HOH HOH A . I 5 HOH 51 110 110 HOH HOH A . I 5 HOH 52 111 111 HOH HOH A . I 5 HOH 53 114 114 HOH HOH A . I 5 HOH 54 115 115 HOH HOH A . I 5 HOH 55 116 116 HOH HOH A . I 5 HOH 56 117 117 HOH HOH A . I 5 HOH 57 118 118 HOH HOH A . I 5 HOH 58 119 119 HOH HOH A . I 5 HOH 59 120 120 HOH HOH A . I 5 HOH 60 121 121 HOH HOH A . I 5 HOH 61 128 128 HOH HOH A . I 5 HOH 62 129 129 HOH HOH A . I 5 HOH 63 131 131 HOH HOH A . I 5 HOH 64 132 132 HOH HOH A . I 5 HOH 65 133 133 HOH HOH A . I 5 HOH 66 137 137 HOH HOH A . I 5 HOH 67 145 145 HOH HOH A . I 5 HOH 68 148 148 HOH HOH A . I 5 HOH 69 149 149 HOH HOH A . I 5 HOH 70 150 150 HOH HOH A . I 5 HOH 71 152 152 HOH HOH A . I 5 HOH 72 665 1 HOH HOH A . J 5 HOH 1 3 3 HOH HOH B . J 5 HOH 2 5 5 HOH HOH B . J 5 HOH 3 7 7 HOH HOH B . J 5 HOH 4 8 8 HOH HOH B . J 5 HOH 5 10 10 HOH HOH B . J 5 HOH 6 11 11 HOH HOH B . J 5 HOH 7 15 15 HOH HOH B . J 5 HOH 8 16 16 HOH HOH B . J 5 HOH 9 18 18 HOH HOH B . J 5 HOH 10 22 22 HOH HOH B . J 5 HOH 11 26 26 HOH HOH B . J 5 HOH 12 32 32 HOH HOH B . J 5 HOH 13 36 36 HOH HOH B . J 5 HOH 14 37 37 HOH HOH B . J 5 HOH 15 39 39 HOH HOH B . J 5 HOH 16 43 43 HOH HOH B . J 5 HOH 17 44 44 HOH HOH B . J 5 HOH 18 49 49 HOH HOH B . J 5 HOH 19 52 52 HOH HOH B . J 5 HOH 20 54 54 HOH HOH B . J 5 HOH 21 55 55 HOH HOH B . J 5 HOH 22 56 56 HOH HOH B . J 5 HOH 23 57 57 HOH HOH B . J 5 HOH 24 58 58 HOH HOH B . J 5 HOH 25 59 59 HOH HOH B . J 5 HOH 26 60 60 HOH HOH B . J 5 HOH 27 61 61 HOH HOH B . J 5 HOH 28 62 62 HOH HOH B . J 5 HOH 29 64 64 HOH HOH B . J 5 HOH 30 66 66 HOH HOH B . J 5 HOH 31 69 69 HOH HOH B . J 5 HOH 32 71 71 HOH HOH B . J 5 HOH 33 72 72 HOH HOH B . J 5 HOH 34 73 73 HOH HOH B . J 5 HOH 35 74 74 HOH HOH B . J 5 HOH 36 75 75 HOH HOH B . J 5 HOH 37 76 76 HOH HOH B . J 5 HOH 38 78 78 HOH HOH B . J 5 HOH 39 83 83 HOH HOH B . J 5 HOH 40 84 84 HOH HOH B . J 5 HOH 41 88 88 HOH HOH B . J 5 HOH 42 89 89 HOH HOH B . J 5 HOH 43 90 90 HOH HOH B . J 5 HOH 44 92 92 HOH HOH B . J 5 HOH 45 93 93 HOH HOH B . J 5 HOH 46 94 94 HOH HOH B . J 5 HOH 47 95 95 HOH HOH B . J 5 HOH 48 97 97 HOH HOH B . J 5 HOH 49 98 98 HOH HOH B . J 5 HOH 50 99 99 HOH HOH B . J 5 HOH 51 100 100 HOH HOH B . J 5 HOH 52 101 101 HOH HOH B . J 5 HOH 53 102 102 HOH HOH B . J 5 HOH 54 103 103 HOH HOH B . J 5 HOH 55 106 106 HOH HOH B . J 5 HOH 56 107 107 HOH HOH B . J 5 HOH 57 108 108 HOH HOH B . J 5 HOH 58 112 112 HOH HOH B . J 5 HOH 59 113 113 HOH HOH B . J 5 HOH 60 122 122 HOH HOH B . J 5 HOH 61 123 123 HOH HOH B . J 5 HOH 62 124 124 HOH HOH B . J 5 HOH 63 125 125 HOH HOH B . J 5 HOH 64 126 126 HOH HOH B . J 5 HOH 65 127 127 HOH HOH B . J 5 HOH 66 130 130 HOH HOH B . J 5 HOH 67 134 134 HOH HOH B . J 5 HOH 68 135 135 HOH HOH B . J 5 HOH 69 136 136 HOH HOH B . J 5 HOH 70 138 138 HOH HOH B . J 5 HOH 71 139 139 HOH HOH B . J 5 HOH 72 140 140 HOH HOH B . J 5 HOH 73 141 141 HOH HOH B . J 5 HOH 74 142 142 HOH HOH B . J 5 HOH 75 143 143 HOH HOH B . J 5 HOH 76 144 144 HOH HOH B . J 5 HOH 77 146 146 HOH HOH B . J 5 HOH 78 147 147 HOH HOH B . J 5 HOH 79 151 151 HOH HOH B . J 5 HOH 80 153 153 HOH HOH B . J 5 HOH 81 665 2 HOH HOH B . #