HEADER METAL BINDING PROTEIN 06-MAR-11 3QZN TITLE STAPHYLOCOCCUS AUREUS ISDA NEAT DOMAIN Y166A VARIANT IN COMPLEX WITH TITLE 2 HEME COMPND MOL_ID: 1; COMPND 2 MOLECULE: IRON-REGULATED SURFACE DETERMINANT PROTEIN A; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: UNP RESIDUES 62-184; COMPND 5 SYNONYM: FUR-REGULATED PROTEIN A, STAPHYLOCOCCAL TRANSFERRIN-BINDING COMPND 6 PROTEIN A; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS; SOURCE 3 ORGANISM_TAXID: 158879; SOURCE 4 STRAIN: N315; SOURCE 5 GENE: FRPA, ISDA, SA0977, STBA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS HEME, TRANSPORT, IRON, UPTAKE, RECEPTOR, CELL WALL, METAL BINDING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.C.GRIGG,C.X.MAO,M.E.P.MURPHY REVDAT 4 13-SEP-23 3QZN 1 REMARK SEQADV LINK REVDAT 3 02-NOV-11 3QZN 1 JRNL REVDAT 2 05-OCT-11 3QZN 1 JRNL REVDAT 1 31-AUG-11 3QZN 0 JRNL AUTH J.C.GRIGG,C.X.MAO,M.E.MURPHY JRNL TITL IRON-COORDINATING TYROSINE IS A KEY DETERMINANT OF NEAT JRNL TITL 2 DOMAIN HEME TRANSFER. JRNL REF J.MOL.BIOL. V. 413 684 2011 JRNL REFN ISSN 0022-2836 JRNL PMID 21893067 JRNL DOI 10.1016/J.JMB.2011.08.047 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 39184 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1969 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2683 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.16 REMARK 3 BIN R VALUE (WORKING SET) : 0.2600 REMARK 3 BIN FREE R VALUE SET COUNT : 149 REMARK 3 BIN FREE R VALUE : 0.2920 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2949 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 155 REMARK 3 SOLVENT ATOMS : 364 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.94000 REMARK 3 B22 (A**2) : 0.87000 REMARK 3 B33 (A**2) : -1.80000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.160 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.150 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.104 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.745 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3427 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4756 ; 1.381 ; 2.162 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 380 ; 6.373 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 159 ;43.271 ;25.723 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 536 ;15.239 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;18.111 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 464 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2684 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1881 ; 0.865 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3089 ; 1.606 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1546 ; 2.073 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1667 ; 3.326 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 3QZN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-MAR-11. REMARK 100 THE DEPOSITION ID IS D_1000064304. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 (ACCEL DCM) WITH AN INDIRECTLY REMARK 200 CRYO-COOLED FIRST CRYSTAL AND REMARK 200 SAGITTALLY FOCUSING SECOND REMARK 200 CRYSTAL REMARK 200 OPTICS : VERTICALLY FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39286 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 45.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.42100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2ITF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0 M AMMONIUM SULFATE, 0.1 M HEPES, REMARK 280 PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.65100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.88500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.38200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.88500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.65100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.38200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 58 REMARK 465 SER A 59 REMARK 465 HIS A 60 REMARK 465 MET A 61 REMARK 465 SER A 62 REMARK 465 GLN A 63 REMARK 465 GLY B 58 REMARK 465 SER B 59 REMARK 465 HIS B 60 REMARK 465 MET B 61 REMARK 465 SER B 62 REMARK 465 GLN B 63 REMARK 465 GLY C 58 REMARK 465 SER C 59 REMARK 465 HIS C 60 REMARK 465 MET C 61 REMARK 465 SER C 62 REMARK 465 GLN C 63 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN B 123 O HOH B 352 2.18 REMARK 500 O HOH A 36 O HOH B 199 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 98 -118.44 52.03 REMARK 500 GLN B 163 18.44 52.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 200 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 83 NE2 REMARK 620 2 HEM A 200 NA 88.9 REMARK 620 3 HEM A 200 NB 90.7 92.4 REMARK 620 4 HEM A 200 NC 90.1 178.7 86.8 REMARK 620 5 HEM A 200 ND 90.6 87.2 178.6 93.6 REMARK 620 6 HOH A 353 O 178.1 92.4 87.9 88.6 90.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 200 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 83 NE2 REMARK 620 2 HEM A 200 NA 88.7 REMARK 620 3 HEM A 200 NB 89.9 92.5 REMARK 620 4 HEM A 200 NC 89.1 177.6 86.3 REMARK 620 5 HEM A 200 ND 90.2 87.7 179.7 93.5 REMARK 620 6 HOH A 353 O 177.4 93.3 88.3 88.8 91.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 200 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 83 NE2 REMARK 620 2 HEM B 200 NA 93.9 REMARK 620 3 HEM B 200 NB 94.0 92.0 REMARK 620 4 HEM B 200 NC 95.7 170.3 88.0 REMARK 620 5 HEM B 200 ND 92.8 91.5 172.1 87.4 REMARK 620 6 HIS B 168 NE2 175.0 87.8 90.6 82.5 82.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 200 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 83 NE2 REMARK 620 2 HEM B 200 NA 87.7 REMARK 620 3 HEM B 200 NB 89.5 90.3 REMARK 620 4 HEM B 200 NC 93.4 178.8 90.2 REMARK 620 5 HEM B 200 ND 88.7 90.0 178.1 89.5 REMARK 620 6 HIS B 168 NE2 174.8 90.5 95.5 88.3 86.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM C 200 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 83 NE2 REMARK 620 2 HEM C 200 NA 94.7 REMARK 620 3 HEM C 200 NB 87.9 90.9 REMARK 620 4 HEM C 200 NC 85.9 179.2 88.6 REMARK 620 5 HEM C 200 ND 90.5 88.1 178.0 92.4 REMARK 620 6 HIS C 168 NE2 174.5 90.8 91.7 88.6 90.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM C 200 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 83 NE2 REMARK 620 2 HEM C 200 NA 89.1 REMARK 620 3 HEM C 200 NB 83.7 86.7 REMARK 620 4 HEM C 200 NC 85.3 173.4 89.2 REMARK 620 5 HEM C 200 ND 89.0 86.9 170.3 96.5 REMARK 620 6 HIS C 168 NE2 176.6 91.1 92.9 94.2 94.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM B 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM C 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 5 DBREF 3QZN A 62 184 UNP Q7A655 ISDA_STAAN 62 184 DBREF 3QZN B 62 184 UNP Q7A655 ISDA_STAAN 62 184 DBREF 3QZN C 62 184 UNP Q7A655 ISDA_STAAN 62 184 SEQADV 3QZN GLY A 58 UNP Q7A655 EXPRESSION TAG SEQADV 3QZN SER A 59 UNP Q7A655 EXPRESSION TAG SEQADV 3QZN HIS A 60 UNP Q7A655 EXPRESSION TAG SEQADV 3QZN MET A 61 UNP Q7A655 EXPRESSION TAG SEQADV 3QZN ALA A 166 UNP Q7A655 TYR 166 ENGINEERED MUTATION SEQADV 3QZN GLY B 58 UNP Q7A655 EXPRESSION TAG SEQADV 3QZN SER B 59 UNP Q7A655 EXPRESSION TAG SEQADV 3QZN HIS B 60 UNP Q7A655 EXPRESSION TAG SEQADV 3QZN MET B 61 UNP Q7A655 EXPRESSION TAG SEQADV 3QZN ALA B 166 UNP Q7A655 TYR 166 ENGINEERED MUTATION SEQADV 3QZN GLY C 58 UNP Q7A655 EXPRESSION TAG SEQADV 3QZN SER C 59 UNP Q7A655 EXPRESSION TAG SEQADV 3QZN HIS C 60 UNP Q7A655 EXPRESSION TAG SEQADV 3QZN MET C 61 UNP Q7A655 EXPRESSION TAG SEQADV 3QZN ALA C 166 UNP Q7A655 TYR 166 ENGINEERED MUTATION SEQRES 1 A 127 GLY SER HIS MET SER GLN ALA THR SER GLN PRO ILE ASN SEQRES 2 A 127 PHE GLN VAL GLN LYS ASP GLY SER SER GLU LYS SER HIS SEQRES 3 A 127 MET ASP ASP TYR MET GLN HIS PRO GLY LYS VAL ILE LYS SEQRES 4 A 127 GLN ASN ASN LYS TYR TYR PHE GLN THR VAL LEU ASN ASN SEQRES 5 A 127 ALA SER PHE TRP LYS GLU TYR LYS PHE TYR ASN ALA ASN SEQRES 6 A 127 ASN GLN GLU LEU ALA THR THR VAL VAL ASN ASP ASN LYS SEQRES 7 A 127 LYS ALA ASP THR ARG THR ILE ASN VAL ALA VAL GLU PRO SEQRES 8 A 127 GLY TYR LYS SER LEU THR THR LYS VAL HIS ILE VAL VAL SEQRES 9 A 127 PRO GLN ILE ASN ALA ASN HIS ARG TYR THR THR HIS LEU SEQRES 10 A 127 GLU PHE GLU LYS ALA ILE PRO THR LEU ALA SEQRES 1 B 127 GLY SER HIS MET SER GLN ALA THR SER GLN PRO ILE ASN SEQRES 2 B 127 PHE GLN VAL GLN LYS ASP GLY SER SER GLU LYS SER HIS SEQRES 3 B 127 MET ASP ASP TYR MET GLN HIS PRO GLY LYS VAL ILE LYS SEQRES 4 B 127 GLN ASN ASN LYS TYR TYR PHE GLN THR VAL LEU ASN ASN SEQRES 5 B 127 ALA SER PHE TRP LYS GLU TYR LYS PHE TYR ASN ALA ASN SEQRES 6 B 127 ASN GLN GLU LEU ALA THR THR VAL VAL ASN ASP ASN LYS SEQRES 7 B 127 LYS ALA ASP THR ARG THR ILE ASN VAL ALA VAL GLU PRO SEQRES 8 B 127 GLY TYR LYS SER LEU THR THR LYS VAL HIS ILE VAL VAL SEQRES 9 B 127 PRO GLN ILE ASN ALA ASN HIS ARG TYR THR THR HIS LEU SEQRES 10 B 127 GLU PHE GLU LYS ALA ILE PRO THR LEU ALA SEQRES 1 C 127 GLY SER HIS MET SER GLN ALA THR SER GLN PRO ILE ASN SEQRES 2 C 127 PHE GLN VAL GLN LYS ASP GLY SER SER GLU LYS SER HIS SEQRES 3 C 127 MET ASP ASP TYR MET GLN HIS PRO GLY LYS VAL ILE LYS SEQRES 4 C 127 GLN ASN ASN LYS TYR TYR PHE GLN THR VAL LEU ASN ASN SEQRES 5 C 127 ALA SER PHE TRP LYS GLU TYR LYS PHE TYR ASN ALA ASN SEQRES 6 C 127 ASN GLN GLU LEU ALA THR THR VAL VAL ASN ASP ASN LYS SEQRES 7 C 127 LYS ALA ASP THR ARG THR ILE ASN VAL ALA VAL GLU PRO SEQRES 8 C 127 GLY TYR LYS SER LEU THR THR LYS VAL HIS ILE VAL VAL SEQRES 9 C 127 PRO GLN ILE ASN ALA ASN HIS ARG TYR THR THR HIS LEU SEQRES 10 C 127 GLU PHE GLU LYS ALA ILE PRO THR LEU ALA HET HEM A 200 86 HET SO4 A 2 5 HET GOL A 5 6 HET HEM B 200 86 HET SO4 B 1 5 HET SO4 B 3 5 HET SO4 B 4 5 HET HEM C 200 86 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN HEM HEME HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 HEM 3(C34 H32 FE N4 O4) FORMUL 5 SO4 4(O4 S 2-) FORMUL 6 GOL C3 H8 O3 FORMUL 12 HOH *364(H2 O) HELIX 1 1 SER A 82 MET A 88 5 7 HELIX 2 2 PRO A 162 ASN A 165 5 4 HELIX 3 3 SER B 82 MET B 88 5 7 HELIX 4 4 SER C 82 MET C 88 5 7 SHEET 1 A 5 SER A 66 ILE A 69 0 SHEET 2 A 5 GLY A 92 GLN A 97 -1 O VAL A 94 N GLN A 67 SHEET 3 A 5 LYS A 100 ASN A 108 -1 O GLN A 104 N LYS A 93 SHEET 4 A 5 THR A 139 VAL A 146 -1 O ARG A 140 N LEU A 107 SHEET 5 A 5 THR A 128 ASN A 134 -1 N ASN A 134 O THR A 139 SHEET 1 B 5 PHE A 71 LYS A 75 0 SHEET 2 B 5 ALA A 166 PHE A 176 -1 O HIS A 173 N GLN A 74 SHEET 3 B 5 SER A 152 VAL A 161 -1 N LEU A 153 O LEU A 174 SHEET 4 B 5 TRP A 113 TYR A 119 -1 N TYR A 119 O THR A 154 SHEET 5 B 5 GLU A 125 LEU A 126 -1 O LEU A 126 N PHE A 118 SHEET 1 C 5 THR B 65 ILE B 69 0 SHEET 2 C 5 GLY B 92 GLN B 97 -1 O GLY B 92 N ILE B 69 SHEET 3 C 5 LYS B 100 ASN B 108 -1 O GLN B 104 N LYS B 93 SHEET 4 C 5 THR B 139 VAL B 146 -1 O ARG B 140 N LEU B 107 SHEET 5 C 5 THR B 128 ASN B 134 -1 N ASN B 134 O THR B 139 SHEET 1 D 4 PHE B 71 LYS B 75 0 SHEET 2 D 4 ARG B 169 PHE B 176 -1 O GLU B 175 N GLN B 72 SHEET 3 D 4 SER B 152 ILE B 159 -1 N LEU B 153 O LEU B 174 SHEET 4 D 4 TRP B 113 TYR B 119 -1 N TYR B 119 O THR B 154 SHEET 1 E 5 GLN C 67 ILE C 69 0 SHEET 2 E 5 GLY C 92 GLN C 97 -1 O VAL C 94 N GLN C 67 SHEET 3 E 5 LYS C 100 ASN C 108 -1 O GLN C 104 N LYS C 93 SHEET 4 E 5 THR C 139 VAL C 146 -1 O ARG C 140 N LEU C 107 SHEET 5 E 5 THR C 128 ASN C 134 -1 N VAL C 131 O THR C 141 SHEET 1 F 5 PHE C 71 LYS C 75 0 SHEET 2 F 5 ARG C 169 PHE C 176 -1 O GLU C 175 N GLN C 72 SHEET 3 F 5 SER C 152 ILE C 159 -1 N LEU C 153 O LEU C 174 SHEET 4 F 5 TRP C 113 TYR C 119 -1 N TYR C 119 O THR C 154 SHEET 5 F 5 GLU C 125 LEU C 126 -1 O LEU C 126 N PHE C 118 LINK NE2 HIS A 83 FE BHEM A 200 1555 1555 2.02 LINK NE2 HIS A 83 FE AHEM A 200 1555 1555 2.04 LINK FE AHEM A 200 O HOH A 353 1555 1555 2.19 LINK FE BHEM A 200 O HOH A 353 1555 1555 2.21 LINK NE2 HIS B 83 FE BHEM B 200 1555 1555 1.96 LINK NE2 HIS B 83 FE AHEM B 200 1555 1555 2.12 LINK NE2 HIS B 168 FE AHEM B 200 1555 1555 1.99 LINK NE2 HIS B 168 FE BHEM B 200 1555 1555 2.14 LINK NE2 HIS C 83 FE AHEM C 200 1555 1555 2.04 LINK NE2 HIS C 83 FE BHEM C 200 1555 1555 2.14 LINK NE2 HIS C 168 FE BHEM C 200 1555 1555 2.00 LINK NE2 HIS C 168 FE AHEM C 200 1555 1555 2.11 CISPEP 1 HIS A 90 PRO A 91 0 -5.45 CISPEP 2 HIS B 90 PRO B 91 0 -1.51 CISPEP 3 HIS C 90 PRO C 91 0 -4.10 SITE 1 AC1 19 LYS A 75 SER A 82 HIS A 83 MET A 84 SITE 2 AC1 19 TYR A 87 PHE A 112 TRP A 113 ILE A 159 SITE 3 AC1 19 VAL A 161 ILE A 164 HIS A 168 TYR A 170 SITE 4 AC1 19 THR A 172 HOH A 190 HOH A 198 HOH A 215 SITE 5 AC1 19 HOH A 353 PRO C 162 GLN C 163 SITE 1 AC2 21 HOH B 11 LYS B 75 SER B 82 HIS B 83 SITE 2 AC2 21 MET B 84 TYR B 87 PHE B 112 TRP B 113 SITE 3 AC2 21 ILE B 159 HIS B 168 TYR B 170 THR B 172 SITE 4 AC2 21 HOH B 207 HOH B 285 VAL C 161 ILE C 164 SITE 5 AC2 21 ALA C 166 ASN C 167 HIS C 168 TYR C 170 SITE 6 AC2 21 HEM C 200 SITE 1 AC3 17 ILE B 164 ALA B 166 ASN B 167 HIS B 168 SITE 2 AC3 17 TYR B 170 HEM B 200 HOH C 18 HOH C 41 SITE 3 AC3 17 SER C 82 HIS C 83 TYR C 87 PHE C 112 SITE 4 AC3 17 TRP C 113 ILE C 159 HIS C 168 TYR C 170 SITE 5 AC3 17 THR C 172 SITE 1 AC4 5 GLN B 89 HIS B 90 HOH B 191 HOH B 280 SITE 2 AC4 5 HOH B 291 SITE 1 AC5 3 GLN A 74 HOH A 321 GLN C 124 SITE 1 AC6 3 HOH A 266 LYS B 151 ALA B 179 SITE 1 AC7 6 LYS A 93 ASP B 133 ASN B 134 LYS B 135 SITE 2 AC7 6 LYS B 136 HOH B 350 SITE 1 AC8 1 ARG A 140 CRYST1 61.302 96.764 95.770 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016313 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010334 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010442 0.00000