HEADER METAL BINDING PROTEIN 06-MAR-11 3QZO TITLE STAPHYLOCOCCUS AUREUS ISDA NEAT DOMAIN IN COMPLEX WITH HEME, REDUCED TITLE 2 CRYSTAL COMPND MOL_ID: 1; COMPND 2 MOLECULE: IRON-REGULATED SURFACE DETERMINANT PROTEIN A; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: UNP RESIDUES 62-184; COMPND 5 SYNONYM: FUR-REGULATED PROTEIN A, STAPHYLOCOCCAL TRANSFERRIN-BINDING COMPND 6 PROTEIN A; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS; SOURCE 3 ORGANISM_TAXID: 158879; SOURCE 4 STRAIN: N315; SOURCE 5 GENE: FRPA, ISDA, SA0977, STBA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS HEME, TRANSPORT, IRON, UPTAKE, RECEPTOR, CELL WALL, FERROUS, METAL KEYWDS 2 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.C.GRIGG,C.X.MAO,M.E.P.MURPHY REVDAT 4 13-SEP-23 3QZO 1 REMARK SEQADV LINK REVDAT 3 02-NOV-11 3QZO 1 JRNL REVDAT 2 05-OCT-11 3QZO 1 JRNL REVDAT 1 31-AUG-11 3QZO 0 JRNL AUTH J.C.GRIGG,C.X.MAO,M.E.MURPHY JRNL TITL IRON-COORDINATING TYROSINE IS A KEY DETERMINANT OF NEAT JRNL TITL 2 DOMAIN HEME TRANSFER. JRNL REF J.MOL.BIOL. V. 413 684 2011 JRNL REFN ISSN 0022-2836 JRNL PMID 21893067 JRNL DOI 10.1016/J.JMB.2011.08.047 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 45582 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2313 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2786 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.52 REMARK 3 BIN R VALUE (WORKING SET) : 0.2820 REMARK 3 BIN FREE R VALUE SET COUNT : 148 REMARK 3 BIN FREE R VALUE : 0.3170 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3998 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 184 REMARK 3 SOLVENT ATOMS : 415 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.33000 REMARK 3 B22 (A**2) : -1.68000 REMARK 3 B33 (A**2) : 1.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.14000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.173 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.163 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.110 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.837 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4558 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6308 ; 1.371 ; 2.158 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 497 ; 6.226 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 217 ;42.214 ;25.760 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 715 ;14.342 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;17.471 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 613 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3568 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2489 ; 0.743 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4077 ; 1.347 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2069 ; 1.896 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2231 ; 2.926 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 3QZO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-MAR-11. REMARK 100 THE DEPOSITION ID IS D_1000064305. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 (ACCEL DCM) WITH AN INDIRECTLY REMARK 200 CRYO-COOLED FIRST CRYSTAL AND REMARK 200 SAGITTALLY FOCUSING SECOND REMARK 200 CRYSTAL REMARK 200 OPTICS : VERTICALLY FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45601 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.37700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2ITF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULFATE, 0.1 M MES, 30% REMARK 280 PEG 6000, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 29.29600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 58 REMARK 465 SER A 59 REMARK 465 HIS A 60 REMARK 465 MET A 61 REMARK 465 SER A 62 REMARK 465 GLN A 63 REMARK 465 GLY B 58 REMARK 465 SER B 59 REMARK 465 HIS B 60 REMARK 465 MET B 61 REMARK 465 SER B 62 REMARK 465 GLN B 63 REMARK 465 GLY C 58 REMARK 465 SER C 59 REMARK 465 HIS C 60 REMARK 465 MET C 61 REMARK 465 GLY D 58 REMARK 465 SER D 59 REMARK 465 HIS D 60 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 98 61.41 31.07 REMARK 500 ASN B 98 38.77 37.16 REMARK 500 ASN B 99 128.26 61.45 REMARK 500 GLN C 63 36.12 -94.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 200 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 83 ND1 REMARK 620 2 HEM A 200 NA 109.7 REMARK 620 3 HEM A 200 NB 91.5 83.1 REMARK 620 4 HEM A 200 NC 95.2 150.5 80.7 REMARK 620 5 HEM A 200 ND 115.1 90.4 153.2 93.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 200 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 83 ND1 REMARK 620 2 HEM A 200 NA 96.7 REMARK 620 3 HEM A 200 NB 86.0 90.4 REMARK 620 4 HEM A 200 NC 85.3 177.8 88.9 REMARK 620 5 HEM A 200 ND 95.5 88.5 178.2 92.2 REMARK 620 6 TYR A 166 OH 164.8 88.0 79.5 89.8 99.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 200 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 83 ND1 REMARK 620 2 HEM B 200 NA 92.8 REMARK 620 3 HEM B 200 NB 79.4 91.5 REMARK 620 4 HEM B 200 NC 88.7 177.3 86.6 REMARK 620 5 HEM B 200 ND 103.5 87.4 177.0 94.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 200 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR B 166 OH REMARK 620 2 HEM B 200 NA 114.8 REMARK 620 3 HEM B 200 NB 105.0 84.1 REMARK 620 4 HEM B 200 NC 117.7 127.5 85.2 REMARK 620 5 HEM B 200 ND 124.7 70.0 129.7 78.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM C 200 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR C 166 OH REMARK 620 2 HEM C 200 NA 88.8 REMARK 620 3 HEM C 200 NB 103.1 95.5 REMARK 620 4 HEM C 200 NC 110.1 154.7 96.2 REMARK 620 5 HEM C 200 ND 98.1 77.2 157.5 83.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM C 200 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR C 166 OH REMARK 620 2 HEM C 200 NA 83.0 REMARK 620 3 HEM C 200 NB 85.2 90.9 REMARK 620 4 HEM C 200 NC 97.6 177.4 86.6 REMARK 620 5 HEM C 200 ND 98.2 89.3 176.5 93.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM D 200 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR D 166 OH REMARK 620 2 HEM D 200 NA 94.8 REMARK 620 3 HEM D 200 NB 100.5 91.2 REMARK 620 4 HEM D 200 NC 89.1 176.1 88.0 REMARK 620 5 HEM D 200 ND 82.3 88.7 177.1 91.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM D 200 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR D 166 OH REMARK 620 2 HEM D 200 NA 88.1 REMARK 620 3 HEM D 200 NB 95.6 90.1 REMARK 620 4 HEM D 200 NC 85.5 173.6 90.3 REMARK 620 5 HEM D 200 ND 77.5 86.2 172.2 92.7 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM B 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM C 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM D 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 1 DBREF 3QZO A 62 184 UNP Q7A655 ISDA_STAAN 62 184 DBREF 3QZO B 62 184 UNP Q7A655 ISDA_STAAN 62 184 DBREF 3QZO C 62 184 UNP Q7A655 ISDA_STAAN 62 184 DBREF 3QZO D 62 184 UNP Q7A655 ISDA_STAAN 62 184 SEQADV 3QZO GLY A 58 UNP Q7A655 EXPRESSION TAG SEQADV 3QZO SER A 59 UNP Q7A655 EXPRESSION TAG SEQADV 3QZO HIS A 60 UNP Q7A655 EXPRESSION TAG SEQADV 3QZO MET A 61 UNP Q7A655 EXPRESSION TAG SEQADV 3QZO GLY B 58 UNP Q7A655 EXPRESSION TAG SEQADV 3QZO SER B 59 UNP Q7A655 EXPRESSION TAG SEQADV 3QZO HIS B 60 UNP Q7A655 EXPRESSION TAG SEQADV 3QZO MET B 61 UNP Q7A655 EXPRESSION TAG SEQADV 3QZO GLY C 58 UNP Q7A655 EXPRESSION TAG SEQADV 3QZO SER C 59 UNP Q7A655 EXPRESSION TAG SEQADV 3QZO HIS C 60 UNP Q7A655 EXPRESSION TAG SEQADV 3QZO MET C 61 UNP Q7A655 EXPRESSION TAG SEQADV 3QZO GLY D 58 UNP Q7A655 EXPRESSION TAG SEQADV 3QZO SER D 59 UNP Q7A655 EXPRESSION TAG SEQADV 3QZO HIS D 60 UNP Q7A655 EXPRESSION TAG SEQADV 3QZO MET D 61 UNP Q7A655 EXPRESSION TAG SEQRES 1 A 127 GLY SER HIS MET SER GLN ALA THR SER GLN PRO ILE ASN SEQRES 2 A 127 PHE GLN VAL GLN LYS ASP GLY SER SER GLU LYS SER HIS SEQRES 3 A 127 MET ASP ASP TYR MET GLN HIS PRO GLY LYS VAL ILE LYS SEQRES 4 A 127 GLN ASN ASN LYS TYR TYR PHE GLN THR VAL LEU ASN ASN SEQRES 5 A 127 ALA SER PHE TRP LYS GLU TYR LYS PHE TYR ASN ALA ASN SEQRES 6 A 127 ASN GLN GLU LEU ALA THR THR VAL VAL ASN ASP ASN LYS SEQRES 7 A 127 LYS ALA ASP THR ARG THR ILE ASN VAL ALA VAL GLU PRO SEQRES 8 A 127 GLY TYR LYS SER LEU THR THR LYS VAL HIS ILE VAL VAL SEQRES 9 A 127 PRO GLN ILE ASN TYR ASN HIS ARG TYR THR THR HIS LEU SEQRES 10 A 127 GLU PHE GLU LYS ALA ILE PRO THR LEU ALA SEQRES 1 B 127 GLY SER HIS MET SER GLN ALA THR SER GLN PRO ILE ASN SEQRES 2 B 127 PHE GLN VAL GLN LYS ASP GLY SER SER GLU LYS SER HIS SEQRES 3 B 127 MET ASP ASP TYR MET GLN HIS PRO GLY LYS VAL ILE LYS SEQRES 4 B 127 GLN ASN ASN LYS TYR TYR PHE GLN THR VAL LEU ASN ASN SEQRES 5 B 127 ALA SER PHE TRP LYS GLU TYR LYS PHE TYR ASN ALA ASN SEQRES 6 B 127 ASN GLN GLU LEU ALA THR THR VAL VAL ASN ASP ASN LYS SEQRES 7 B 127 LYS ALA ASP THR ARG THR ILE ASN VAL ALA VAL GLU PRO SEQRES 8 B 127 GLY TYR LYS SER LEU THR THR LYS VAL HIS ILE VAL VAL SEQRES 9 B 127 PRO GLN ILE ASN TYR ASN HIS ARG TYR THR THR HIS LEU SEQRES 10 B 127 GLU PHE GLU LYS ALA ILE PRO THR LEU ALA SEQRES 1 C 127 GLY SER HIS MET SER GLN ALA THR SER GLN PRO ILE ASN SEQRES 2 C 127 PHE GLN VAL GLN LYS ASP GLY SER SER GLU LYS SER HIS SEQRES 3 C 127 MET ASP ASP TYR MET GLN HIS PRO GLY LYS VAL ILE LYS SEQRES 4 C 127 GLN ASN ASN LYS TYR TYR PHE GLN THR VAL LEU ASN ASN SEQRES 5 C 127 ALA SER PHE TRP LYS GLU TYR LYS PHE TYR ASN ALA ASN SEQRES 6 C 127 ASN GLN GLU LEU ALA THR THR VAL VAL ASN ASP ASN LYS SEQRES 7 C 127 LYS ALA ASP THR ARG THR ILE ASN VAL ALA VAL GLU PRO SEQRES 8 C 127 GLY TYR LYS SER LEU THR THR LYS VAL HIS ILE VAL VAL SEQRES 9 C 127 PRO GLN ILE ASN TYR ASN HIS ARG TYR THR THR HIS LEU SEQRES 10 C 127 GLU PHE GLU LYS ALA ILE PRO THR LEU ALA SEQRES 1 D 127 GLY SER HIS MET SER GLN ALA THR SER GLN PRO ILE ASN SEQRES 2 D 127 PHE GLN VAL GLN LYS ASP GLY SER SER GLU LYS SER HIS SEQRES 3 D 127 MET ASP ASP TYR MET GLN HIS PRO GLY LYS VAL ILE LYS SEQRES 4 D 127 GLN ASN ASN LYS TYR TYR PHE GLN THR VAL LEU ASN ASN SEQRES 5 D 127 ALA SER PHE TRP LYS GLU TYR LYS PHE TYR ASN ALA ASN SEQRES 6 D 127 ASN GLN GLU LEU ALA THR THR VAL VAL ASN ASP ASN LYS SEQRES 7 D 127 LYS ALA ASP THR ARG THR ILE ASN VAL ALA VAL GLU PRO SEQRES 8 D 127 GLY TYR LYS SER LEU THR THR LYS VAL HIS ILE VAL VAL SEQRES 9 D 127 PRO GLN ILE ASN TYR ASN HIS ARG TYR THR THR HIS LEU SEQRES 10 D 127 GLU PHE GLU LYS ALA ILE PRO THR LEU ALA HET HEM A 200 86 HET HEM B 200 86 HET HEM C 200 86 HET GOL C 2 6 HET HEM D 200 86 HET GOL D 1 6 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM GOL GLYCEROL HETSYN HEM HEME HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 HEM 4(C34 H32 FE N4 O4) FORMUL 8 GOL 2(C3 H8 O3) FORMUL 11 HOH *415(H2 O) HELIX 1 1 SER A 82 MET A 88 5 7 HELIX 2 2 PRO A 162 ASN A 165 5 4 HELIX 3 3 SER B 82 MET B 88 5 7 HELIX 4 4 PRO B 162 ASN B 165 5 4 HELIX 5 5 SER C 82 MET C 88 5 7 HELIX 6 6 PRO C 162 ASN C 165 5 4 HELIX 7 7 SER D 82 MET D 88 5 7 HELIX 8 8 PRO D 162 ASN D 165 5 4 SHEET 1 A 5 THR A 65 ILE A 69 0 SHEET 2 A 5 GLY A 92 GLN A 97 -1 O LYS A 96 N THR A 65 SHEET 3 A 5 LYS A 100 ASN A 108 -1 O GLN A 104 N LYS A 93 SHEET 4 A 5 THR A 139 VAL A 146 -1 O ARG A 140 N LEU A 107 SHEET 5 A 5 THR A 128 ASN A 134 -1 N THR A 129 O ASN A 143 SHEET 1 B 5 PHE A 71 LYS A 75 0 SHEET 2 B 5 TYR A 166 PHE A 176 -1 O HIS A 173 N GLN A 74 SHEET 3 B 5 SER A 152 VAL A 161 -1 N LEU A 153 O LEU A 174 SHEET 4 B 5 TRP A 113 TYR A 119 -1 N TYR A 119 O THR A 154 SHEET 5 B 5 GLU A 125 LEU A 126 -1 O LEU A 126 N PHE A 118 SHEET 1 C 5 SER B 66 ILE B 69 0 SHEET 2 C 5 GLY B 92 LYS B 96 -1 O GLY B 92 N ILE B 69 SHEET 3 C 5 TYR B 101 ASN B 108 -1 O TYR B 102 N ILE B 95 SHEET 4 C 5 THR B 139 VAL B 146 -1 O ARG B 140 N LEU B 107 SHEET 5 C 5 THR B 128 ASN B 134 -1 N THR B 129 O ASN B 143 SHEET 1 D 5 PHE B 71 LYS B 75 0 SHEET 2 D 5 TYR B 166 PHE B 176 -1 O GLU B 175 N GLN B 72 SHEET 3 D 5 SER B 152 VAL B 161 -1 N THR B 155 O THR B 172 SHEET 4 D 5 TRP B 113 TYR B 119 -1 N GLU B 115 O HIS B 158 SHEET 5 D 5 GLU B 125 LEU B 126 -1 O LEU B 126 N PHE B 118 SHEET 1 E 5 THR C 65 ILE C 69 0 SHEET 2 E 5 GLY C 92 GLN C 97 -1 O VAL C 94 N GLN C 67 SHEET 3 E 5 LYS C 100 ASN C 108 -1 O GLN C 104 N LYS C 93 SHEET 4 E 5 THR C 139 VAL C 146 -1 O ARG C 140 N LEU C 107 SHEET 5 E 5 THR C 128 ASN C 134 -1 N VAL C 131 O THR C 141 SHEET 1 F 5 PHE C 71 LYS C 75 0 SHEET 2 F 5 TYR C 166 PHE C 176 -1 O HIS C 173 N GLN C 74 SHEET 3 F 5 SER C 152 VAL C 161 -1 N LEU C 153 O LEU C 174 SHEET 4 F 5 TRP C 113 TYR C 119 -1 N TYR C 119 O THR C 154 SHEET 5 F 5 GLU C 125 LEU C 126 -1 O LEU C 126 N PHE C 118 SHEET 1 G 5 THR D 65 ILE D 69 0 SHEET 2 G 5 GLY D 92 GLN D 97 -1 O VAL D 94 N GLN D 67 SHEET 3 G 5 LYS D 100 ASN D 108 -1 O GLN D 104 N LYS D 93 SHEET 4 G 5 THR D 139 VAL D 146 -1 O ARG D 140 N LEU D 107 SHEET 5 G 5 THR D 128 ASN D 134 -1 N VAL D 131 O THR D 141 SHEET 1 H 5 PHE D 71 LYS D 75 0 SHEET 2 H 5 TYR D 166 PHE D 176 -1 O HIS D 173 N GLN D 74 SHEET 3 H 5 SER D 152 VAL D 161 -1 N LEU D 153 O LEU D 174 SHEET 4 H 5 TRP D 113 TYR D 119 -1 N GLU D 115 O HIS D 158 SHEET 5 H 5 GLU D 125 LEU D 126 -1 O LEU D 126 N PHE D 118 LINK ND1 HIS A 83 FE BHEM A 200 1555 1555 2.15 LINK ND1 HIS A 83 FE AHEM A 200 1555 1555 2.58 LINK OH TYR A 166 FE AHEM A 200 1555 1555 2.50 LINK ND1 HIS B 83 FE AHEM B 200 1555 1555 2.22 LINK OH TYR B 166 FE BHEM B 200 1555 1555 2.25 LINK OH TYR C 166 FE BHEM C 200 1555 1555 2.34 LINK OH TYR C 166 FE AHEM C 200 1555 1555 2.68 LINK OH TYR D 166 FE AHEM D 200 1555 1555 2.27 LINK OH TYR D 166 FE BHEM D 200 1555 1555 2.45 CISPEP 1 HIS A 90 PRO A 91 0 -7.03 CISPEP 2 ASN A 98 ASN A 99 0 -5.72 CISPEP 3 HIS B 90 PRO B 91 0 -2.44 CISPEP 4 ASN B 99 LYS B 100 0 8.30 CISPEP 5 HIS C 90 PRO C 91 0 -7.99 CISPEP 6 HIS D 90 PRO D 91 0 -7.01 SITE 1 AC1 19 LYS A 75 SER A 82 HIS A 83 MET A 84 SITE 2 AC1 19 TYR A 87 PHE A 112 TRP A 113 ILE A 159 SITE 3 AC1 19 ILE A 164 TYR A 166 TYR A 170 THR A 172 SITE 4 AC1 19 HOH A 187 PRO B 162 GLN B 163 ILE B 164 SITE 5 AC1 19 ASN B 165 PRO C 162 GLN C 163 SITE 1 AC2 15 PRO A 162 GLN A 163 ASN A 165 LYS B 75 SITE 2 AC2 15 SER B 82 HIS B 83 MET B 84 TYR B 87 SITE 3 AC2 15 PHE B 112 TRP B 113 ILE B 159 TYR B 166 SITE 4 AC2 15 TYR B 170 THR B 172 HOH B 288 SITE 1 AC3 19 LYS C 75 SER C 82 HIS C 83 MET C 84 SITE 2 AC3 19 TYR C 87 PHE C 112 TRP C 113 ILE C 159 SITE 3 AC3 19 VAL C 161 ILE C 164 TYR C 166 TYR C 170 SITE 4 AC3 19 THR C 172 HOH C 185 HOH C 195 HOH C 244 SITE 5 AC3 19 ASP D 86 TYR D 87 HEM D 200 SITE 1 AC4 5 LYS C 114 HIS C 158 ASN C 167 ARG C 169 SITE 2 AC4 5 HOH C 369 SITE 1 AC5 21 ASP C 86 TYR C 87 HOH C 197 HEM C 200 SITE 2 AC5 21 HOH C 213 HOH D 4 HOH D 15 LYS D 75 SITE 3 AC5 21 SER D 82 HIS D 83 MET D 84 TYR D 87 SITE 4 AC5 21 TRP D 113 ILE D 159 VAL D 161 ILE D 164 SITE 5 AC5 21 TYR D 166 TYR D 170 THR D 172 HOH D 185 SITE 6 AC5 21 HOH D 212 SITE 1 AC6 3 LYS D 114 HIS D 158 ASN D 167 CRYST1 56.041 58.592 97.834 90.00 92.98 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017844 0.000000 0.000930 0.00000 SCALE2 0.000000 0.017067 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010235 0.00000