HEADER HYDROLASE/HYDROLASE INHIBITOR 07-MAR-11 3QZR TITLE HUMAN ENTEROVIRUS 71 3C PROTEASE MUTANT E71A IN COMPLEX WITH TITLE 2 RUPINTRIVIR COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3C PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 3C PROTEASE; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN ENTEROVIRUS 71; SOURCE 3 ORGANISM_TAXID: 39054; SOURCE 4 STRAIN: 71; SOURCE 5 GENE: POLYPROTEIN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-28A KEYWDS CHYMOTRYPSIN-FOLD, BETA-RIBBON, HYDROLYSIS, NUCLEUS, HYDROLASE- KEYWDS 2 HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.WANG,T.FAN,X.YAO,Z.WU,L.GUO,X.LEI,J.WANG,M.WANG,Q.JIN,S.CUI REVDAT 5 21-FEB-24 3QZR 1 REMARK SEQADV REVDAT 4 06-MAY-15 3QZR 1 COMPND REVDAT 3 28-SEP-11 3QZR 1 JRNL REVDAT 2 24-AUG-11 3QZR 1 AUTHOR JRNL REVDAT 1 10-AUG-11 3QZR 0 JRNL AUTH J.WANG,T.FAN,X.YAO,Z.WU,L.GUO,X.LEI,J.WANG,M.WANG,Q.JIN, JRNL AUTH 2 S.CUI JRNL TITL CRYSTAL STRUCTURES OF ENTEROVIRUS 71 3C PROTEASE COMPLEXED JRNL TITL 2 WITH RUPINTRIVIR REVEAL THE ROLES OF CATALYTICALLY IMPORTANT JRNL TITL 3 RESIDUES. JRNL REF J.VIROL. V. 85 10021 2011 JRNL REFN ISSN 0022-538X JRNL PMID 21813612 JRNL DOI 10.1128/JVI.05107-11 REMARK 2 REMARK 2 RESOLUTION. 1.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.1_357) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.240 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 319101 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.164 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 15949 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 25.6428 - 3.2263 0.97 10116 532 0.1893 0.1883 REMARK 3 2 3.2263 - 2.5616 0.99 10218 541 0.1574 0.1742 REMARK 3 3 2.5616 - 2.2380 1.00 10326 551 0.1447 0.1662 REMARK 3 4 2.2380 - 2.0334 0.96 9906 523 0.1271 0.1427 REMARK 3 5 2.0334 - 1.8877 0.97 10026 533 0.1230 0.1496 REMARK 3 6 1.8877 - 1.7765 0.99 10215 540 0.1266 0.1282 REMARK 3 7 1.7765 - 1.6875 0.99 10241 536 0.1227 0.1392 REMARK 3 8 1.6875 - 1.6141 0.99 10317 539 0.1151 0.1293 REMARK 3 9 1.6141 - 1.5520 0.99 10264 539 0.1146 0.1307 REMARK 3 10 1.5520 - 1.4984 0.97 10165 531 0.1123 0.1315 REMARK 3 11 1.4984 - 1.4516 0.97 10006 522 0.1143 0.1258 REMARK 3 12 1.4516 - 1.4101 0.98 10088 537 0.1166 0.1403 REMARK 3 13 1.4101 - 1.3729 0.98 10230 537 0.1202 0.1396 REMARK 3 14 1.3729 - 1.3395 0.99 10194 531 0.1171 0.1433 REMARK 3 15 1.3395 - 1.3090 0.99 10281 535 0.1221 0.1609 REMARK 3 16 1.3090 - 1.2811 0.99 10244 537 0.1257 0.1452 REMARK 3 17 1.2811 - 1.2555 0.99 10215 540 0.1277 0.1511 REMARK 3 18 1.2555 - 1.2318 0.99 10258 538 0.1324 0.1484 REMARK 3 19 1.2318 - 1.2098 0.97 10109 541 0.1421 0.1572 REMARK 3 20 1.2098 - 1.1893 0.96 9962 517 0.1423 0.1603 REMARK 3 21 1.1893 - 1.1701 0.97 10052 524 0.1408 0.1494 REMARK 3 22 1.1701 - 1.1521 0.98 10153 538 0.1506 0.1641 REMARK 3 23 1.1521 - 1.1352 0.98 10154 531 0.1520 0.1717 REMARK 3 24 1.1352 - 1.1192 0.98 10141 535 0.1648 0.1796 REMARK 3 25 1.1192 - 1.1041 0.98 10183 532 0.1717 0.1851 REMARK 3 26 1.1041 - 1.0897 0.98 10050 525 0.1868 0.1982 REMARK 3 27 1.0897 - 1.0761 0.98 10155 539 0.1965 0.2048 REMARK 3 28 1.0761 - 1.0632 0.98 10111 534 0.2160 0.2382 REMARK 3 29 1.0632 - 1.0508 0.96 9864 519 0.2368 0.2299 REMARK 3 30 1.0508 - 1.0390 0.86 8908 472 0.2615 0.2711 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.44 REMARK 3 B_SOL : 63.47 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.110 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 13.450 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.38 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 3610 REMARK 3 ANGLE : 1.608 4989 REMARK 3 CHIRALITY : 0.148 560 REMARK 3 PLANARITY : 0.008 656 REMARK 3 DIHEDRAL : 15.986 1542 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3QZR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-MAR-11. REMARK 100 THE DEPOSITION ID IS D_1000064308. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.800000 REMARK 200 MONOCHROMATOR : DOUBLE CHANNEL-CUT SI(111) REMARK 200 OPTICS : BARTELS MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS PACKAGE REMARK 200 DATA SCALING SOFTWARE : XDS PACKAGE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 166419 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.039 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.920 REMARK 200 R MERGE (I) : 0.02800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.43500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS.HCL 100MM,PEG1000 28%, PH 8.3, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y,-Z REMARK 290 8555 X,-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.89250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.27000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.91100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.27000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.89250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.91100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 34.89250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.91100 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 51.27000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.91100 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 34.89250 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 51.27000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CD GLN B 66 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 315 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 320 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 370 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 SER A 181 REMARK 465 GLU A 182 REMARK 465 GLN A 183 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 HIS B -1 REMARK 465 MET B 0 REMARK 465 GLY B 1 REMARK 465 PRO B 2 REMARK 465 SER B 3 REMARK 465 LEU B 4 REMARK 465 SER B 181 REMARK 465 GLU B 182 REMARK 465 GLN B 183 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 PHE A 124 CE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS B 147 C19 AG7 B 501 1.87 REMARK 500 SG CYS A 147 C19 AG7 A 501 1.89 REMARK 500 O HOH B 350 O HOH B 351 1.95 REMARK 500 O HOH B 374 O HOH B 381 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 31 130.19 -170.27 REMARK 500 ARG A 31 134.03 -170.27 REMARK 500 ASP A 32 -117.30 56.45 REMARK 500 ASP A 32 -117.30 49.76 REMARK 500 GLU A 50 58.86 36.77 REMARK 500 SER A 111 69.01 34.78 REMARK 500 TYR A 122 -54.38 -130.95 REMARK 500 ASP B 32 -125.19 51.20 REMARK 500 GLU B 50 59.54 37.71 REMARK 500 ASP B 64 -165.50 -128.44 REMARK 500 ASN B 69 125.50 -32.46 REMARK 500 SER B 111 67.90 38.91 REMARK 500 TYR B 122 -59.86 -128.54 REMARK 500 HIS B 133 -158.59 -143.69 REMARK 500 ARG B 134 31.27 75.73 REMARK 500 ARG B 134 38.11 39.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AG7 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 184 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AG7 B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 184 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3OSY RELATED DB: PDB REMARK 900 THIS IS THE APO STRUCTURE OF THE SAME PROTEIN DBREF 3QZR A 1 183 UNP E7E815 E7E815_9ENTO 1 183 DBREF 3QZR B 1 183 UNP E7E815 E7E815_9ENTO 1 183 SEQADV 3QZR GLY A -3 UNP E7E815 EXPRESSION TAG SEQADV 3QZR SER A -2 UNP E7E815 EXPRESSION TAG SEQADV 3QZR HIS A -1 UNP E7E815 EXPRESSION TAG SEQADV 3QZR MET A 0 UNP E7E815 EXPRESSION TAG SEQADV 3QZR ALA A 71 UNP E7E815 GLU 71 ENGINEERED MUTATION SEQADV 3QZR GLY B -3 UNP E7E815 EXPRESSION TAG SEQADV 3QZR SER B -2 UNP E7E815 EXPRESSION TAG SEQADV 3QZR HIS B -1 UNP E7E815 EXPRESSION TAG SEQADV 3QZR MET B 0 UNP E7E815 EXPRESSION TAG SEQADV 3QZR ALA B 71 UNP E7E815 GLU 71 ENGINEERED MUTATION SEQRES 1 A 187 GLY SER HIS MET GLY PRO SER LEU ASP PHE ALA LEU SER SEQRES 2 A 187 LEU LEU ARG ARG ASN VAL ARG GLN VAL GLN THR ASP GLN SEQRES 3 A 187 GLY HIS PHE THR MET LEU GLY VAL ARG ASP ARG LEU ALA SEQRES 4 A 187 VAL LEU PRO ARG HIS SER GLN PRO GLY LYS THR ILE TRP SEQRES 5 A 187 ILE GLU HIS LYS LEU VAL ASN VAL LEU ASP ALA VAL GLU SEQRES 6 A 187 LEU VAL ASP GLU GLN GLY VAL ASN LEU ALA LEU THR LEU SEQRES 7 A 187 ILE THR LEU ASP THR ASN GLU LYS PHE ARG ASP ILE THR SEQRES 8 A 187 LYS PHE ILE PRO GLU ASN ILE SER THR ALA SER ASP ALA SEQRES 9 A 187 THR LEU VAL ILE ASN THR GLU HIS MET PRO SER MET PHE SEQRES 10 A 187 VAL PRO VAL GLY ASP VAL VAL GLN TYR GLY PHE LEU ASN SEQRES 11 A 187 LEU SER GLY LYS PRO THR HIS ARG THR MET MET TYR ASN SEQRES 12 A 187 PHE PRO THR LYS ALA GLY GLN CYS GLY GLY VAL VAL THR SEQRES 13 A 187 SER VAL GLY LYS ILE ILE GLY ILE HIS ILE GLY GLY ASN SEQRES 14 A 187 GLY ARG GLN GLY PHE CYS ALA GLY LEU LYS ARG SER TYR SEQRES 15 A 187 PHE ALA SER GLU GLN SEQRES 1 B 187 GLY SER HIS MET GLY PRO SER LEU ASP PHE ALA LEU SER SEQRES 2 B 187 LEU LEU ARG ARG ASN VAL ARG GLN VAL GLN THR ASP GLN SEQRES 3 B 187 GLY HIS PHE THR MET LEU GLY VAL ARG ASP ARG LEU ALA SEQRES 4 B 187 VAL LEU PRO ARG HIS SER GLN PRO GLY LYS THR ILE TRP SEQRES 5 B 187 ILE GLU HIS LYS LEU VAL ASN VAL LEU ASP ALA VAL GLU SEQRES 6 B 187 LEU VAL ASP GLU GLN GLY VAL ASN LEU ALA LEU THR LEU SEQRES 7 B 187 ILE THR LEU ASP THR ASN GLU LYS PHE ARG ASP ILE THR SEQRES 8 B 187 LYS PHE ILE PRO GLU ASN ILE SER THR ALA SER ASP ALA SEQRES 9 B 187 THR LEU VAL ILE ASN THR GLU HIS MET PRO SER MET PHE SEQRES 10 B 187 VAL PRO VAL GLY ASP VAL VAL GLN TYR GLY PHE LEU ASN SEQRES 11 B 187 LEU SER GLY LYS PRO THR HIS ARG THR MET MET TYR ASN SEQRES 12 B 187 PHE PRO THR LYS ALA GLY GLN CYS GLY GLY VAL VAL THR SEQRES 13 B 187 SER VAL GLY LYS ILE ILE GLY ILE HIS ILE GLY GLY ASN SEQRES 14 B 187 GLY ARG GLN GLY PHE CYS ALA GLY LEU LYS ARG SER TYR SEQRES 15 B 187 PHE ALA SER GLU GLN HET AG7 A 501 83 HET EDO A 184 4 HET AG7 B 501 83 HET EDO B 184 4 HETNAM AG7 4-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE- HETNAM 2 AG7 3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO- HETNAM 3 AG7 PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER HETNAM EDO 1,2-ETHANEDIOL HETSYN AG7 RUPINTRIVIR, BOUND FORM HETSYN EDO ETHYLENE GLYCOL FORMUL 3 AG7 2(C31 H41 F N4 O7) FORMUL 4 EDO 2(C2 H6 O2) FORMUL 7 HOH *393(H2 O) HELIX 1 1 GLY A 1 ASN A 14 1 14 HELIX 2 2 HIS A 40 GLN A 42 5 3 HELIX 3 3 ILE A 86 ILE A 90 5 5 HELIX 4 4 LYS A 175 ALA A 180 5 6 HELIX 5 5 ASP B 5 ASN B 14 1 10 HELIX 6 6 HIS B 40 GLN B 42 5 3 HELIX 7 7 ILE B 86 ILE B 90 5 5 HELIX 8 8 LYS B 175 ALA B 180 5 6 SHEET 1 A 7 VAL A 15 THR A 20 0 SHEET 2 A 7 GLY A 23 ARG A 31 -1 O MET A 27 N ARG A 16 SHEET 3 A 7 LEU A 34 PRO A 38 -1 O LEU A 34 N VAL A 30 SHEET 4 A 7 LEU A 72 LEU A 77 -1 O THR A 73 N LEU A 37 SHEET 5 A 7 LYS A 52 GLU A 61 -1 N VAL A 60 O LEU A 74 SHEET 6 A 7 THR A 46 ILE A 49 -1 N ILE A 49 O LYS A 52 SHEET 7 A 7 VAL A 15 THR A 20 -1 N GLN A 19 O TRP A 48 SHEET 1 B 7 ALA A 97 ILE A 104 0 SHEET 2 B 7 MET A 112 LEU A 127 -1 O MET A 112 N ILE A 104 SHEET 3 B 7 LYS A 130 TYR A 138 -1 O THR A 132 N LEU A 125 SHEET 4 B 7 GLY A 169 GLY A 173 -1 O GLY A 169 N TYR A 138 SHEET 5 B 7 LYS A 156 GLY A 164 -1 N ILE A 162 O PHE A 170 SHEET 6 B 7 VAL A 150 SER A 153 -1 N VAL A 151 O GLY A 159 SHEET 7 B 7 ALA A 97 ILE A 104 -1 N VAL A 103 O VAL A 150 SHEET 1 C 7 VAL B 15 THR B 20 0 SHEET 2 C 7 GLY B 23 ARG B 31 -1 O MET B 27 N ARG B 16 SHEET 3 C 7 LEU B 34 PRO B 38 -1 O LEU B 34 N VAL B 30 SHEET 4 C 7 LEU B 72 LEU B 77 -1 O THR B 73 N LEU B 37 SHEET 5 C 7 LYS B 52 GLU B 61 -1 N VAL B 60 O LEU B 74 SHEET 6 C 7 THR B 46 ILE B 49 -1 N ILE B 49 O LYS B 52 SHEET 7 C 7 VAL B 15 THR B 20 -1 N GLN B 19 O TRP B 48 SHEET 1 D 7 ALA B 97 ILE B 104 0 SHEET 2 D 7 MET B 112 LEU B 127 -1 O VAL B 119 N ALA B 97 SHEET 3 D 7 LYS B 130 TYR B 138 -1 O MET B 137 N VAL B 120 SHEET 4 D 7 GLY B 169 GLY B 173 -1 O GLY B 169 N TYR B 138 SHEET 5 D 7 LYS B 156 GLY B 164 -1 N ILE B 162 O PHE B 170 SHEET 6 D 7 VAL B 150 SER B 153 -1 N VAL B 151 O GLY B 159 SHEET 7 D 7 ALA B 97 ILE B 104 -1 N THR B 101 O THR B 152 SITE 1 AC1 21 ARG A 39 HIS A 40 LEU A 125 ASN A 126 SITE 2 AC1 21 LEU A 127 SER A 128 LYS A 130 THR A 142 SITE 3 AC1 21 LYS A 143 ALA A 144 GLY A 145 CYS A 147 SITE 4 AC1 21 HIS A 161 ILE A 162 GLY A 163 GLY A 164 SITE 5 AC1 21 ASN A 165 PHE A 170 EDO A 184 HOH A 252 SITE 6 AC1 21 HOH A 358 SITE 1 AC2 7 GLN A 22 GLY A 23 HIS A 24 HOH A 200 SITE 2 AC2 7 HOH A 260 HOH A 281 AG7 A 501 SITE 1 AC3 21 ARG B 39 HIS B 40 LEU B 125 ASN B 126 SITE 2 AC3 21 LEU B 127 SER B 128 LYS B 130 THR B 142 SITE 3 AC3 21 LYS B 143 ALA B 144 GLY B 145 CYS B 147 SITE 4 AC3 21 HIS B 161 ILE B 162 GLY B 163 GLY B 164 SITE 5 AC3 21 ASN B 165 PHE B 170 EDO B 184 HOH B 314 SITE 6 AC3 21 HOH B 328 SITE 1 AC4 7 GLN B 22 GLY B 23 HIS B 24 GLY B 145 SITE 2 AC4 7 HOH B 194 HOH B 259 AG7 B 501 CRYST1 69.785 97.822 102.540 90.00 90.00 90.00 I 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014330 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010223 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009752 0.00000