data_3R14 # _entry.id 3R14 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3R14 RCSB RCSB064357 WWPDB D_1000064357 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2013-02-06 _pdbx_database_PDB_obs_spr.pdb_id 4IPT _pdbx_database_PDB_obs_spr.replace_pdb_id 3R14 _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC100850 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code OBS _pdbx_database_status.entry_id 3R14 _pdbx_database_status.recvd_initial_deposition_date 2011-03-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tan, K.' 1 'Hatzos-Skintges, C.' 2 'Clancy, S.' 3 'Joachimiak, A.' 4 'Midwest Center for Structural Genomics (MCSG)' 5 # _citation.id primary _citation.title 'The crystal structure of a NAD-dependent epimerase/dehydratase from Veillonella parvula DSM 2008' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Tan, K.' 1 primary 'Hatzos-Skintges, C.' 2 primary 'Clancy, S.' 3 primary 'Joachimiak, A.' 4 # _cell.entry_id 3R14 _cell.length_a 51.681 _cell.length_b 60.758 _cell.length_c 68.769 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3R14 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'NAD-dependent epimerase/dehydratase' 25083.756 1 ? ? ? ? 2 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 4 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 2 ? ? ? ? 5 non-polymer syn 'FORMIC ACID' 46.025 1 ? ? ? ? 6 water nat water 18.015 132 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNA(MSE)YKYITILGAAGQIAQKLTATLLTYTD(MSE)HITLYGRQL(ELY)TRIPPEIIDHERVTVIEGSFQNPGKLE QAVTNAEVVFVGA(MSE)ESGSD(MSE)ASIV(ELY)ALSRKNIRRVIGVS(MSE)AGLSGEFPVALEKWTFDNLPISYV QGERQARNVLRESNLNYTILRLTWLYNDPEKTDYELIPEGAQFNDAQVSREAVV(ELY)AIFDILHAADETPFHRTSIGV GEPGTHYDKPSFH ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAMYKYITILGAAGQIAQKLTATLLTYTDMHITLYGRQLXTRIPPEIIDHERVTVIEGSFQNPGKLEQAVTNAEVVFVG AMESGSDMASIVXALSRKNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLYND PEKTDYELIPEGAQFNDAQVSREAVVXAIFDILHAADETPFHRTSIGVGEPGTHYDKPSFH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC100850 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 MSE n 1 5 TYR n 1 6 LYS n 1 7 TYR n 1 8 ILE n 1 9 THR n 1 10 ILE n 1 11 LEU n 1 12 GLY n 1 13 ALA n 1 14 ALA n 1 15 GLY n 1 16 GLN n 1 17 ILE n 1 18 ALA n 1 19 GLN n 1 20 LYS n 1 21 LEU n 1 22 THR n 1 23 ALA n 1 24 THR n 1 25 LEU n 1 26 LEU n 1 27 THR n 1 28 TYR n 1 29 THR n 1 30 ASP n 1 31 MSE n 1 32 HIS n 1 33 ILE n 1 34 THR n 1 35 LEU n 1 36 TYR n 1 37 GLY n 1 38 ARG n 1 39 GLN n 1 40 LEU n 1 41 ELY n 1 42 THR n 1 43 ARG n 1 44 ILE n 1 45 PRO n 1 46 PRO n 1 47 GLU n 1 48 ILE n 1 49 ILE n 1 50 ASP n 1 51 HIS n 1 52 GLU n 1 53 ARG n 1 54 VAL n 1 55 THR n 1 56 VAL n 1 57 ILE n 1 58 GLU n 1 59 GLY n 1 60 SER n 1 61 PHE n 1 62 GLN n 1 63 ASN n 1 64 PRO n 1 65 GLY n 1 66 LYS n 1 67 LEU n 1 68 GLU n 1 69 GLN n 1 70 ALA n 1 71 VAL n 1 72 THR n 1 73 ASN n 1 74 ALA n 1 75 GLU n 1 76 VAL n 1 77 VAL n 1 78 PHE n 1 79 VAL n 1 80 GLY n 1 81 ALA n 1 82 MSE n 1 83 GLU n 1 84 SER n 1 85 GLY n 1 86 SER n 1 87 ASP n 1 88 MSE n 1 89 ALA n 1 90 SER n 1 91 ILE n 1 92 VAL n 1 93 ELY n 1 94 ALA n 1 95 LEU n 1 96 SER n 1 97 ARG n 1 98 LYS n 1 99 ASN n 1 100 ILE n 1 101 ARG n 1 102 ARG n 1 103 VAL n 1 104 ILE n 1 105 GLY n 1 106 VAL n 1 107 SER n 1 108 MSE n 1 109 ALA n 1 110 GLY n 1 111 LEU n 1 112 SER n 1 113 GLY n 1 114 GLU n 1 115 PHE n 1 116 PRO n 1 117 VAL n 1 118 ALA n 1 119 LEU n 1 120 GLU n 1 121 LYS n 1 122 TRP n 1 123 THR n 1 124 PHE n 1 125 ASP n 1 126 ASN n 1 127 LEU n 1 128 PRO n 1 129 ILE n 1 130 SER n 1 131 TYR n 1 132 VAL n 1 133 GLN n 1 134 GLY n 1 135 GLU n 1 136 ARG n 1 137 GLN n 1 138 ALA n 1 139 ARG n 1 140 ASN n 1 141 VAL n 1 142 LEU n 1 143 ARG n 1 144 GLU n 1 145 SER n 1 146 ASN n 1 147 LEU n 1 148 ASN n 1 149 TYR n 1 150 THR n 1 151 ILE n 1 152 LEU n 1 153 ARG n 1 154 LEU n 1 155 THR n 1 156 TRP n 1 157 LEU n 1 158 TYR n 1 159 ASN n 1 160 ASP n 1 161 PRO n 1 162 GLU n 1 163 LYS n 1 164 THR n 1 165 ASP n 1 166 TYR n 1 167 GLU n 1 168 LEU n 1 169 ILE n 1 170 PRO n 1 171 GLU n 1 172 GLY n 1 173 ALA n 1 174 GLN n 1 175 PHE n 1 176 ASN n 1 177 ASP n 1 178 ALA n 1 179 GLN n 1 180 VAL n 1 181 SER n 1 182 ARG n 1 183 GLU n 1 184 ALA n 1 185 VAL n 1 186 VAL n 1 187 ELY n 1 188 ALA n 1 189 ILE n 1 190 PHE n 1 191 ASP n 1 192 ILE n 1 193 LEU n 1 194 HIS n 1 195 ALA n 1 196 ALA n 1 197 ASP n 1 198 GLU n 1 199 THR n 1 200 PRO n 1 201 PHE n 1 202 HIS n 1 203 ARG n 1 204 THR n 1 205 SER n 1 206 ILE n 1 207 GLY n 1 208 VAL n 1 209 GLY n 1 210 GLU n 1 211 PRO n 1 212 GLY n 1 213 THR n 1 214 HIS n 1 215 TYR n 1 216 ASP n 1 217 LYS n 1 218 PRO n 1 219 SER n 1 220 PHE n 1 221 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Veillonella parvula, Vpar_0111' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 10790 / DSM 2008 / JCM 12972 / Te3' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Veillonella parvula' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 479436 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3) magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code D1BQI7_VEIPT _struct_ref.pdbx_db_accession D1BQI7 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MYKYITILGAAGQIAQKLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGKLEQAVTNAEVVFVGAME SGSDMASIVKALSRKNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLYNDPEK TDYELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPGTHYDKPSFH ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3R14 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 221 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession D1BQI7 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 218 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 218 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3R14 SER A 1 ? UNP D1BQI7 ? ? 'EXPRESSION TAG' -2 1 1 3R14 ASN A 2 ? UNP D1BQI7 ? ? 'EXPRESSION TAG' -1 2 1 3R14 ALA A 3 ? UNP D1BQI7 ? ? 'EXPRESSION TAG' 0 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 ELY 'L-peptide linking' n N~6~,N~6~-diethyl-L-lysine ? 'C10 H22 N2 O2' 202.294 FMT non-polymer . 'FORMIC ACID' ? 'C H2 O2' 46.025 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3R14 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.15 _exptl_crystal.density_percent_sol 42.91 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '0.05M CaCl2, 0.1M Bis-Tris:HCl, 30% (v/v) PEG MME 550, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2010-11-29 _diffrn_detector.details mirror # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97926 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97926 # _reflns.entry_id 3R14 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 42 _reflns.d_resolution_high 1.546 _reflns.number_obs 31918 _reflns.number_all 31918 _reflns.percent_possible_obs 98.7 _reflns.pdbx_Rmerge_I_obs 0.083 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 45.0 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.546 _reflns_shell.d_res_low 1.58 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.667 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.7 _reflns_shell.pdbx_redundancy 6.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1594 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3R14 _refine.ls_number_reflns_obs 30672 _refine.ls_number_reflns_all 30672 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 41.315 _refine.ls_d_res_high 1.5464 _refine.ls_percent_reflns_obs 94.83 _refine.ls_R_factor_obs 0.1918 _refine.ls_R_factor_all 0.1918 _refine.ls_R_factor_R_work 0.1901 _refine.ls_R_factor_R_free 0.2231 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.08 _refine.ls_number_reflns_R_free 1558 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -7.0418 _refine.aniso_B[2][2] 11.0904 _refine.aniso_B[3][3] -4.0487 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.354 _refine.solvent_model_param_bsol 52.172 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.22 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error 22.53 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1728 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 25 _refine_hist.number_atoms_solvent 132 _refine_hist.number_atoms_total 1885 _refine_hist.d_res_high 1.5464 _refine_hist.d_res_low 41.315 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.006 ? ? 1806 ? 'X-RAY DIFFRACTION' f_angle_d 0.969 ? ? 2447 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 17.168 ? ? 677 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.062 ? ? 272 ? 'X-RAY DIFFRACTION' f_plane_restr 0.004 ? ? 314 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.5464 1.6017 2571 0.2497 85.00 0.3003 . . 136 . . . . 'X-RAY DIFFRACTION' . 1.6017 1.6658 2726 0.2361 90.00 0.2794 . . 137 . . . . 'X-RAY DIFFRACTION' . 1.6658 1.7416 2822 0.2048 94.00 0.2610 . . 146 . . . . 'X-RAY DIFFRACTION' . 1.7416 1.8334 2910 0.1913 96.00 0.2287 . . 165 . . . . 'X-RAY DIFFRACTION' . 1.8334 1.9483 2964 0.1859 98.00 0.2155 . . 174 . . . . 'X-RAY DIFFRACTION' . 1.9483 2.0987 3028 0.1827 99.00 0.2382 . . 166 . . . . 'X-RAY DIFFRACTION' . 2.0987 2.3099 3031 0.1769 99.00 0.2106 . . 152 . . . . 'X-RAY DIFFRACTION' . 2.3099 2.6441 3077 0.1816 100.00 0.2210 . . 163 . . . . 'X-RAY DIFFRACTION' . 2.6441 3.3311 3081 0.1910 99.00 0.2321 . . 168 . . . . 'X-RAY DIFFRACTION' . 3.3311 41.3294 2904 0.1855 89.00 0.2007 . . 151 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 3R14 _struct.title 'The crystal structure of a NAD-dependent epimerase/dehydratase from Veillonella parvula DSM 2008' _struct.pdbx_descriptor 'NAD-dependent epimerase/dehydratase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3R14 _struct_keywords.pdbx_keywords 'LYASE, ISOMERASE' _struct_keywords.text ;structural genomics, PSI-Biology, protein structure initiative, MCSG, NAD-dependent epimerase/dehydratase, Midwest Center for Structural Genomics, LYASE, ISOMERASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 15 ? THR A 29 ? GLY A 12 THR A 26 1 ? 15 HELX_P HELX_P2 2 GLN A 39 ? ILE A 44 ? GLN A 36 ILE A 41 1 ? 6 HELX_P HELX_P3 3 PRO A 45 ? ASP A 50 ? PRO A 42 ASP A 47 1 ? 6 HELX_P HELX_P4 4 ASN A 63 ? THR A 72 ? ASN A 60 THR A 69 1 ? 10 HELX_P HELX_P5 5 SER A 84 ? LYS A 98 ? SER A 81 LYS A 95 1 ? 15 HELX_P HELX_P6 6 PRO A 116 ? ASN A 126 ? PRO A 113 ASN A 123 1 ? 11 HELX_P HELX_P7 7 PRO A 128 ? SER A 145 ? PRO A 125 SER A 142 1 ? 18 HELX_P HELX_P8 8 ARG A 182 ? HIS A 194 ? ARG A 179 HIS A 191 1 ? 13 HELX_P HELX_P9 9 GLU A 198 ? HIS A 202 ? GLU A 195 HIS A 199 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A MSE 4 C ? ? ? 1_555 A TYR 5 N ? ? A MSE 1 A TYR 2 1_555 ? ? ? ? ? ? ? 1.327 ? covale2 covale ? ? A ASP 30 C ? ? ? 1_555 A MSE 31 N ? ? A ASP 27 A MSE 28 1_555 ? ? ? ? ? ? ? 1.331 ? covale3 covale ? ? A MSE 31 C ? ? ? 1_555 A HIS 32 N ? ? A MSE 28 A HIS 29 1_555 ? ? ? ? ? ? ? 1.333 ? covale4 covale ? ? A LEU 40 C ? ? ? 1_555 A ELY 41 N ? ? A LEU 37 A ELY 38 1_555 ? ? ? ? ? ? ? 1.328 ? covale5 covale ? ? A ELY 41 C ? ? ? 1_555 A THR 42 N ? ? A ELY 38 A THR 39 1_555 ? ? ? ? ? ? ? 1.323 ? covale6 covale ? ? A ALA 81 C ? ? ? 1_555 A MSE 82 N ? ? A ALA 78 A MSE 79 1_555 ? ? ? ? ? ? ? 1.327 ? covale7 covale ? ? A MSE 82 C ? ? ? 1_555 A GLU 83 N ? ? A MSE 79 A GLU 80 1_555 ? ? ? ? ? ? ? 1.329 ? covale8 covale ? ? A ASP 87 C ? ? ? 1_555 A MSE 88 N ? ? A ASP 84 A MSE 85 1_555 ? ? ? ? ? ? ? 1.330 ? covale9 covale ? ? A MSE 88 C ? ? ? 1_555 A ALA 89 N ? ? A MSE 85 A ALA 86 1_555 ? ? ? ? ? ? ? 1.328 ? covale10 covale ? ? A VAL 92 C ? ? ? 1_555 A ELY 93 N ? ? A VAL 89 A ELY 90 1_555 ? ? ? ? ? ? ? 1.333 ? covale11 covale ? ? A ELY 93 C ? ? ? 1_555 A ALA 94 N ? ? A ELY 90 A ALA 91 1_555 ? ? ? ? ? ? ? 1.324 ? covale12 covale ? ? A SER 107 C ? ? ? 1_555 A MSE 108 N ? ? A SER 104 A MSE 105 1_555 ? ? ? ? ? ? ? 1.323 ? covale13 covale ? ? A MSE 108 C ? ? ? 1_555 A ALA 109 N ? ? A MSE 105 A ALA 106 1_555 ? ? ? ? ? ? ? 1.327 ? covale14 covale ? ? A VAL 186 C ? ? ? 1_555 A ELY 187 N ? ? A VAL 183 A ELY 184 1_555 ? ? ? ? ? ? ? 1.328 ? covale15 covale ? ? A ELY 187 C ? ? ? 1_555 A ALA 188 N ? ? A ELY 184 A ALA 185 1_555 ? ? ? ? ? ? ? 1.332 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? anti-parallel B 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 54 ? GLU A 58 ? VAL A 51 GLU A 55 A 2 HIS A 32 ? GLY A 37 ? HIS A 29 GLY A 34 A 3 TYR A 7 ? LEU A 11 ? TYR A 4 LEU A 8 A 4 VAL A 76 ? VAL A 79 ? VAL A 73 VAL A 76 A 5 ARG A 102 ? MSE A 108 ? ARG A 99 MSE A 105 A 6 ASN A 148 ? LEU A 154 ? ASN A 145 LEU A 151 A 7 THR A 204 ? GLY A 209 ? THR A 201 GLY A 206 A 8 GLU A 167 ? ILE A 169 ? GLU A 164 ILE A 166 B 1 TRP A 156 ? TYR A 158 ? TRP A 153 TYR A 155 B 2 GLN A 179 ? SER A 181 ? GLN A 176 SER A 178 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 57 ? O ILE A 54 N LEU A 35 ? N LEU A 32 A 2 3 O THR A 34 ? O THR A 31 N ILE A 10 ? N ILE A 7 A 3 4 N LEU A 11 ? N LEU A 8 O PHE A 78 ? O PHE A 75 A 4 5 N VAL A 79 ? N VAL A 76 O ILE A 104 ? O ILE A 101 A 5 6 N GLY A 105 ? N GLY A 102 O LEU A 152 ? O LEU A 149 A 6 7 N ILE A 151 ? N ILE A 148 O ILE A 206 ? O ILE A 203 A 7 8 O GLY A 207 ? O GLY A 204 N ILE A 169 ? N ILE A 166 B 1 2 N TRP A 156 ? N TRP A 153 O VAL A 180 ? O VAL A 177 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE GOL A 219' AC2 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE CL A 220' AC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE CL A 221' AC4 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE PEG A 222' AC5 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE PEG A 223' AC6 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE FMT A 224' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 MSE A 108 ? MSE A 105 . ? 1_555 ? 2 AC1 8 ALA A 109 ? ALA A 106 . ? 1_555 ? 3 AC1 8 PHE A 115 ? PHE A 112 . ? 1_555 ? 4 AC1 8 LEU A 154 ? LEU A 151 . ? 1_555 ? 5 AC1 8 THR A 155 ? THR A 152 . ? 1_555 ? 6 AC1 8 HOH H . ? HOH A 235 . ? 1_555 ? 7 AC1 8 HOH H . ? HOH A 238 . ? 1_555 ? 8 AC1 8 HOH H . ? HOH A 295 . ? 1_555 ? 9 AC2 3 GLN A 16 ? GLN A 13 . ? 1_555 ? 10 AC2 3 ILE A 17 ? ILE A 14 . ? 1_555 ? 11 AC2 3 ARG A 182 ? ARG A 179 . ? 1_555 ? 12 AC3 4 GLY A 12 ? GLY A 9 . ? 1_555 ? 13 AC3 4 ALA A 13 ? ALA A 10 . ? 1_555 ? 14 AC3 4 ALA A 14 ? ALA A 11 . ? 1_555 ? 15 AC3 4 HOH H . ? HOH A 256 . ? 1_555 ? 16 AC4 1 LEU A 127 ? LEU A 124 . ? 1_555 ? 17 AC5 3 GLY A 65 ? GLY A 62 . ? 1_455 ? 18 AC5 3 GLN A 69 ? GLN A 66 . ? 1_455 ? 19 AC5 3 HIS A 214 ? HIS A 211 . ? 1_555 ? 20 AC6 5 ARG A 97 ? ARG A 94 . ? 4_465 ? 21 AC6 5 ARG A 143 ? ARG A 140 . ? 1_555 ? 22 AC6 5 TYR A 149 ? TYR A 146 . ? 1_555 ? 23 AC6 5 GLU A 171 ? GLU A 168 . ? 1_555 ? 24 AC6 5 SER A 205 ? SER A 202 . ? 1_555 ? # _database_PDB_matrix.entry_id 3R14 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3R14 _atom_sites.fract_transf_matrix[1][1] 0.019349 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016459 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014541 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 ASN 2 -1 ? ? ? A . n A 1 3 ALA 3 0 ? ? ? A . n A 1 4 MSE 4 1 1 MSE MSE A . n A 1 5 TYR 5 2 2 TYR TYR A . n A 1 6 LYS 6 3 3 LYS LYS A . n A 1 7 TYR 7 4 4 TYR TYR A . n A 1 8 ILE 8 5 5 ILE ILE A . n A 1 9 THR 9 6 6 THR THR A . n A 1 10 ILE 10 7 7 ILE ILE A . n A 1 11 LEU 11 8 8 LEU LEU A . n A 1 12 GLY 12 9 9 GLY GLY A . n A 1 13 ALA 13 10 10 ALA ALA A . n A 1 14 ALA 14 11 11 ALA ALA A . n A 1 15 GLY 15 12 12 GLY GLY A . n A 1 16 GLN 16 13 13 GLN GLN A . n A 1 17 ILE 17 14 14 ILE ILE A . n A 1 18 ALA 18 15 15 ALA ALA A . n A 1 19 GLN 19 16 16 GLN GLN A . n A 1 20 LYS 20 17 17 LYS LYS A . n A 1 21 LEU 21 18 18 LEU LEU A . n A 1 22 THR 22 19 19 THR THR A . n A 1 23 ALA 23 20 20 ALA ALA A . n A 1 24 THR 24 21 21 THR THR A . n A 1 25 LEU 25 22 22 LEU LEU A . n A 1 26 LEU 26 23 23 LEU LEU A . n A 1 27 THR 27 24 24 THR THR A . n A 1 28 TYR 28 25 25 TYR TYR A . n A 1 29 THR 29 26 26 THR THR A . n A 1 30 ASP 30 27 27 ASP ASP A . n A 1 31 MSE 31 28 28 MSE MSE A . n A 1 32 HIS 32 29 29 HIS HIS A . n A 1 33 ILE 33 30 30 ILE ILE A . n A 1 34 THR 34 31 31 THR THR A . n A 1 35 LEU 35 32 32 LEU LEU A . n A 1 36 TYR 36 33 33 TYR TYR A . n A 1 37 GLY 37 34 34 GLY GLY A . n A 1 38 ARG 38 35 35 ARG ARG A . n A 1 39 GLN 39 36 36 GLN GLN A . n A 1 40 LEU 40 37 37 LEU LEU A . n A 1 41 ELY 41 38 38 ELY ELY A . n A 1 42 THR 42 39 39 THR THR A . n A 1 43 ARG 43 40 40 ARG ARG A . n A 1 44 ILE 44 41 41 ILE ILE A . n A 1 45 PRO 45 42 42 PRO PRO A . n A 1 46 PRO 46 43 43 PRO PRO A . n A 1 47 GLU 47 44 44 GLU GLU A . n A 1 48 ILE 48 45 45 ILE ILE A . n A 1 49 ILE 49 46 46 ILE ILE A . n A 1 50 ASP 50 47 47 ASP ASP A . n A 1 51 HIS 51 48 48 HIS HIS A . n A 1 52 GLU 52 49 49 GLU GLU A . n A 1 53 ARG 53 50 50 ARG ARG A . n A 1 54 VAL 54 51 51 VAL VAL A . n A 1 55 THR 55 52 52 THR THR A . n A 1 56 VAL 56 53 53 VAL VAL A . n A 1 57 ILE 57 54 54 ILE ILE A . n A 1 58 GLU 58 55 55 GLU GLU A . n A 1 59 GLY 59 56 56 GLY GLY A . n A 1 60 SER 60 57 57 SER SER A . n A 1 61 PHE 61 58 58 PHE PHE A . n A 1 62 GLN 62 59 59 GLN GLN A . n A 1 63 ASN 63 60 60 ASN ASN A . n A 1 64 PRO 64 61 61 PRO PRO A . n A 1 65 GLY 65 62 62 GLY GLY A . n A 1 66 LYS 66 63 63 LYS LYS A . n A 1 67 LEU 67 64 64 LEU LEU A . n A 1 68 GLU 68 65 65 GLU GLU A . n A 1 69 GLN 69 66 66 GLN GLN A . n A 1 70 ALA 70 67 67 ALA ALA A . n A 1 71 VAL 71 68 68 VAL VAL A . n A 1 72 THR 72 69 69 THR THR A . n A 1 73 ASN 73 70 70 ASN ASN A . n A 1 74 ALA 74 71 71 ALA ALA A . n A 1 75 GLU 75 72 72 GLU GLU A . n A 1 76 VAL 76 73 73 VAL VAL A . n A 1 77 VAL 77 74 74 VAL VAL A . n A 1 78 PHE 78 75 75 PHE PHE A . n A 1 79 VAL 79 76 76 VAL VAL A . n A 1 80 GLY 80 77 77 GLY GLY A . n A 1 81 ALA 81 78 78 ALA ALA A . n A 1 82 MSE 82 79 79 MSE MSE A . n A 1 83 GLU 83 80 80 GLU GLU A . n A 1 84 SER 84 81 81 SER SER A . n A 1 85 GLY 85 82 82 GLY GLY A . n A 1 86 SER 86 83 83 SER SER A . n A 1 87 ASP 87 84 84 ASP ASP A . n A 1 88 MSE 88 85 85 MSE MSE A . n A 1 89 ALA 89 86 86 ALA ALA A . n A 1 90 SER 90 87 87 SER SER A . n A 1 91 ILE 91 88 88 ILE ILE A . n A 1 92 VAL 92 89 89 VAL VAL A . n A 1 93 ELY 93 90 90 ELY ELY A . n A 1 94 ALA 94 91 91 ALA ALA A . n A 1 95 LEU 95 92 92 LEU LEU A . n A 1 96 SER 96 93 93 SER SER A . n A 1 97 ARG 97 94 94 ARG ARG A . n A 1 98 LYS 98 95 95 LYS LYS A . n A 1 99 ASN 99 96 96 ASN ASN A . n A 1 100 ILE 100 97 97 ILE ILE A . n A 1 101 ARG 101 98 98 ARG ARG A . n A 1 102 ARG 102 99 99 ARG ARG A . n A 1 103 VAL 103 100 100 VAL VAL A . n A 1 104 ILE 104 101 101 ILE ILE A . n A 1 105 GLY 105 102 102 GLY GLY A . n A 1 106 VAL 106 103 103 VAL VAL A . n A 1 107 SER 107 104 104 SER SER A . n A 1 108 MSE 108 105 105 MSE MSE A . n A 1 109 ALA 109 106 106 ALA ALA A . n A 1 110 GLY 110 107 107 GLY GLY A . n A 1 111 LEU 111 108 108 LEU LEU A . n A 1 112 SER 112 109 109 SER SER A . n A 1 113 GLY 113 110 110 GLY GLY A . n A 1 114 GLU 114 111 111 GLU GLU A . n A 1 115 PHE 115 112 112 PHE PHE A . n A 1 116 PRO 116 113 113 PRO PRO A . n A 1 117 VAL 117 114 114 VAL VAL A . n A 1 118 ALA 118 115 115 ALA ALA A . n A 1 119 LEU 119 116 116 LEU LEU A . n A 1 120 GLU 120 117 117 GLU GLU A . n A 1 121 LYS 121 118 118 LYS LYS A . n A 1 122 TRP 122 119 119 TRP TRP A . n A 1 123 THR 123 120 120 THR THR A . n A 1 124 PHE 124 121 121 PHE PHE A . n A 1 125 ASP 125 122 122 ASP ASP A . n A 1 126 ASN 126 123 123 ASN ASN A . n A 1 127 LEU 127 124 124 LEU LEU A . n A 1 128 PRO 128 125 125 PRO PRO A . n A 1 129 ILE 129 126 126 ILE ILE A . n A 1 130 SER 130 127 127 SER SER A . n A 1 131 TYR 131 128 128 TYR TYR A . n A 1 132 VAL 132 129 129 VAL VAL A . n A 1 133 GLN 133 130 130 GLN GLN A . n A 1 134 GLY 134 131 131 GLY GLY A . n A 1 135 GLU 135 132 132 GLU GLU A . n A 1 136 ARG 136 133 133 ARG ARG A . n A 1 137 GLN 137 134 134 GLN GLN A . n A 1 138 ALA 138 135 135 ALA ALA A . n A 1 139 ARG 139 136 136 ARG ARG A . n A 1 140 ASN 140 137 137 ASN ASN A . n A 1 141 VAL 141 138 138 VAL VAL A . n A 1 142 LEU 142 139 139 LEU LEU A . n A 1 143 ARG 143 140 140 ARG ARG A . n A 1 144 GLU 144 141 141 GLU GLU A . n A 1 145 SER 145 142 142 SER SER A . n A 1 146 ASN 146 143 143 ASN ASN A . n A 1 147 LEU 147 144 144 LEU LEU A . n A 1 148 ASN 148 145 145 ASN ASN A . n A 1 149 TYR 149 146 146 TYR TYR A . n A 1 150 THR 150 147 147 THR THR A . n A 1 151 ILE 151 148 148 ILE ILE A . n A 1 152 LEU 152 149 149 LEU LEU A . n A 1 153 ARG 153 150 150 ARG ARG A . n A 1 154 LEU 154 151 151 LEU LEU A . n A 1 155 THR 155 152 152 THR THR A . n A 1 156 TRP 156 153 153 TRP TRP A . n A 1 157 LEU 157 154 154 LEU LEU A . n A 1 158 TYR 158 155 155 TYR TYR A . n A 1 159 ASN 159 156 156 ASN ASN A . n A 1 160 ASP 160 157 157 ASP ASP A . n A 1 161 PRO 161 158 158 PRO PRO A . n A 1 162 GLU 162 159 159 GLU GLU A . n A 1 163 LYS 163 160 160 LYS LYS A . n A 1 164 THR 164 161 161 THR THR A . n A 1 165 ASP 165 162 162 ASP ASP A . n A 1 166 TYR 166 163 163 TYR TYR A . n A 1 167 GLU 167 164 164 GLU GLU A . n A 1 168 LEU 168 165 165 LEU LEU A . n A 1 169 ILE 169 166 166 ILE ILE A . n A 1 170 PRO 170 167 167 PRO PRO A . n A 1 171 GLU 171 168 168 GLU GLU A . n A 1 172 GLY 172 169 169 GLY GLY A . n A 1 173 ALA 173 170 170 ALA ALA A . n A 1 174 GLN 174 171 171 GLN GLN A . n A 1 175 PHE 175 172 172 PHE PHE A . n A 1 176 ASN 176 173 173 ASN ASN A . n A 1 177 ASP 177 174 174 ASP ASP A . n A 1 178 ALA 178 175 175 ALA ALA A . n A 1 179 GLN 179 176 176 GLN GLN A . n A 1 180 VAL 180 177 177 VAL VAL A . n A 1 181 SER 181 178 178 SER SER A . n A 1 182 ARG 182 179 179 ARG ARG A . n A 1 183 GLU 183 180 180 GLU GLU A . n A 1 184 ALA 184 181 181 ALA ALA A . n A 1 185 VAL 185 182 182 VAL VAL A . n A 1 186 VAL 186 183 183 VAL VAL A . n A 1 187 ELY 187 184 184 ELY ELY A . n A 1 188 ALA 188 185 185 ALA ALA A . n A 1 189 ILE 189 186 186 ILE ILE A . n A 1 190 PHE 190 187 187 PHE PHE A . n A 1 191 ASP 191 188 188 ASP ASP A . n A 1 192 ILE 192 189 189 ILE ILE A . n A 1 193 LEU 193 190 190 LEU LEU A . n A 1 194 HIS 194 191 191 HIS HIS A . n A 1 195 ALA 195 192 192 ALA ALA A . n A 1 196 ALA 196 193 193 ALA ALA A . n A 1 197 ASP 197 194 194 ASP ASP A . n A 1 198 GLU 198 195 195 GLU GLU A . n A 1 199 THR 199 196 196 THR THR A . n A 1 200 PRO 200 197 197 PRO PRO A . n A 1 201 PHE 201 198 198 PHE PHE A . n A 1 202 HIS 202 199 199 HIS HIS A . n A 1 203 ARG 203 200 200 ARG ARG A . n A 1 204 THR 204 201 201 THR THR A . n A 1 205 SER 205 202 202 SER SER A . n A 1 206 ILE 206 203 203 ILE ILE A . n A 1 207 GLY 207 204 204 GLY GLY A . n A 1 208 VAL 208 205 205 VAL VAL A . n A 1 209 GLY 209 206 206 GLY GLY A . n A 1 210 GLU 210 207 207 GLU GLU A . n A 1 211 PRO 211 208 208 PRO PRO A . n A 1 212 GLY 212 209 209 GLY GLY A . n A 1 213 THR 213 210 210 THR THR A . n A 1 214 HIS 214 211 211 HIS HIS A . n A 1 215 TYR 215 212 212 TYR TYR A . n A 1 216 ASP 216 213 213 ASP ASP A . n A 1 217 LYS 217 214 214 LYS LYS A . n A 1 218 PRO 218 215 215 PRO PRO A . n A 1 219 SER 219 216 216 SER SER A . n A 1 220 PHE 220 217 217 PHE PHE A . n A 1 221 HIS 221 218 218 HIS HIS A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL 1 219 1 GOL GOL A . C 3 CL 1 220 1 CL CL A . D 3 CL 1 221 2 CL CL A . E 4 PEG 1 222 1 PEG PEG A . F 4 PEG 1 223 2 PEG PEG A . G 5 FMT 1 224 1 FMT FMT A . H 6 HOH 1 225 1 HOH HOH A . H 6 HOH 2 226 2 HOH HOH A . H 6 HOH 3 227 3 HOH HOH A . H 6 HOH 4 228 4 HOH HOH A . H 6 HOH 5 229 5 HOH HOH A . H 6 HOH 6 230 6 HOH HOH A . H 6 HOH 7 231 7 HOH HOH A . H 6 HOH 8 232 8 HOH HOH A . H 6 HOH 9 233 9 HOH HOH A . H 6 HOH 10 234 10 HOH HOH A . H 6 HOH 11 235 11 HOH HOH A . H 6 HOH 12 236 12 HOH HOH A . H 6 HOH 13 237 13 HOH HOH A . H 6 HOH 14 238 14 HOH HOH A . H 6 HOH 15 239 15 HOH HOH A . H 6 HOH 16 240 16 HOH HOH A . H 6 HOH 17 241 17 HOH HOH A . H 6 HOH 18 242 18 HOH HOH A . H 6 HOH 19 243 19 HOH HOH A . H 6 HOH 20 244 20 HOH HOH A . H 6 HOH 21 245 21 HOH HOH A . H 6 HOH 22 246 22 HOH HOH A . H 6 HOH 23 247 23 HOH HOH A . H 6 HOH 24 248 24 HOH HOH A . H 6 HOH 25 249 25 HOH HOH A . H 6 HOH 26 250 26 HOH HOH A . H 6 HOH 27 251 27 HOH HOH A . H 6 HOH 28 252 28 HOH HOH A . H 6 HOH 29 253 29 HOH HOH A . H 6 HOH 30 254 30 HOH HOH A . H 6 HOH 31 255 31 HOH HOH A . H 6 HOH 32 256 32 HOH HOH A . H 6 HOH 33 257 33 HOH HOH A . H 6 HOH 34 258 34 HOH HOH A . H 6 HOH 35 259 35 HOH HOH A . H 6 HOH 36 260 36 HOH HOH A . H 6 HOH 37 261 37 HOH HOH A . H 6 HOH 38 262 38 HOH HOH A . H 6 HOH 39 263 39 HOH HOH A . H 6 HOH 40 264 40 HOH HOH A . H 6 HOH 41 265 41 HOH HOH A . H 6 HOH 42 266 42 HOH HOH A . H 6 HOH 43 267 43 HOH HOH A . H 6 HOH 44 268 44 HOH HOH A . H 6 HOH 45 269 45 HOH HOH A . H 6 HOH 46 270 46 HOH HOH A . H 6 HOH 47 271 47 HOH HOH A . H 6 HOH 48 272 48 HOH HOH A . H 6 HOH 49 273 49 HOH HOH A . H 6 HOH 50 274 50 HOH HOH A . H 6 HOH 51 275 51 HOH HOH A . H 6 HOH 52 276 52 HOH HOH A . H 6 HOH 53 277 53 HOH HOH A . H 6 HOH 54 278 54 HOH HOH A . H 6 HOH 55 279 55 HOH HOH A . H 6 HOH 56 280 56 HOH HOH A . H 6 HOH 57 281 57 HOH HOH A . H 6 HOH 58 282 58 HOH HOH A . H 6 HOH 59 283 59 HOH HOH A . H 6 HOH 60 284 60 HOH HOH A . H 6 HOH 61 285 61 HOH HOH A . H 6 HOH 62 286 62 HOH HOH A . H 6 HOH 63 287 63 HOH HOH A . H 6 HOH 64 288 64 HOH HOH A . H 6 HOH 65 289 65 HOH HOH A . H 6 HOH 66 290 66 HOH HOH A . H 6 HOH 67 291 67 HOH HOH A . H 6 HOH 68 292 68 HOH HOH A . H 6 HOH 69 293 69 HOH HOH A . H 6 HOH 70 294 70 HOH HOH A . H 6 HOH 71 295 71 HOH HOH A . H 6 HOH 72 296 72 HOH HOH A . H 6 HOH 73 297 73 HOH HOH A . H 6 HOH 74 298 74 HOH HOH A . H 6 HOH 75 299 75 HOH HOH A . H 6 HOH 76 300 76 HOH HOH A . H 6 HOH 77 301 77 HOH HOH A . H 6 HOH 78 302 78 HOH HOH A . H 6 HOH 79 303 79 HOH HOH A . H 6 HOH 80 304 80 HOH HOH A . H 6 HOH 81 305 81 HOH HOH A . H 6 HOH 82 306 82 HOH HOH A . H 6 HOH 83 307 83 HOH HOH A . H 6 HOH 84 308 84 HOH HOH A . H 6 HOH 85 309 85 HOH HOH A . H 6 HOH 86 310 86 HOH HOH A . H 6 HOH 87 311 87 HOH HOH A . H 6 HOH 88 312 88 HOH HOH A . H 6 HOH 89 313 89 HOH HOH A . H 6 HOH 90 314 90 HOH HOH A . H 6 HOH 91 315 91 HOH HOH A . H 6 HOH 92 316 92 HOH HOH A . H 6 HOH 93 317 93 HOH HOH A . H 6 HOH 94 318 94 HOH HOH A . H 6 HOH 95 319 95 HOH HOH A . H 6 HOH 96 320 96 HOH HOH A . H 6 HOH 97 321 97 HOH HOH A . H 6 HOH 98 322 98 HOH HOH A . H 6 HOH 99 323 99 HOH HOH A . H 6 HOH 100 324 100 HOH HOH A . H 6 HOH 101 325 101 HOH HOH A . H 6 HOH 102 326 102 HOH HOH A . H 6 HOH 103 327 103 HOH HOH A . H 6 HOH 104 328 104 HOH HOH A . H 6 HOH 105 329 105 HOH HOH A . H 6 HOH 106 330 106 HOH HOH A . H 6 HOH 107 331 107 HOH HOH A . H 6 HOH 108 332 108 HOH HOH A . H 6 HOH 109 333 109 HOH HOH A . H 6 HOH 110 334 110 HOH HOH A . H 6 HOH 111 335 111 HOH HOH A . H 6 HOH 112 336 112 HOH HOH A . H 6 HOH 113 337 113 HOH HOH A . H 6 HOH 114 338 114 HOH HOH A . H 6 HOH 115 339 115 HOH HOH A . H 6 HOH 116 340 116 HOH HOH A . H 6 HOH 117 341 117 HOH HOH A . H 6 HOH 118 342 118 HOH HOH A . H 6 HOH 119 343 119 HOH HOH A . H 6 HOH 120 344 120 HOH HOH A . H 6 HOH 121 345 121 HOH HOH A . H 6 HOH 122 346 122 HOH HOH A . H 6 HOH 123 347 123 HOH HOH A . H 6 HOH 124 348 124 HOH HOH A . H 6 HOH 125 349 125 HOH HOH A . H 6 HOH 126 350 126 HOH HOH A . H 6 HOH 127 351 127 HOH HOH A . H 6 HOH 128 352 128 HOH HOH A . H 6 HOH 129 353 129 HOH HOH A . H 6 HOH 130 354 130 HOH HOH A . H 6 HOH 131 355 131 HOH HOH A . H 6 HOH 132 356 132 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 4 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 31 A MSE 28 ? MET SELENOMETHIONINE 3 A ELY 41 A ELY 38 ? LYS N~6~,N~6~-DIETHYL-L-LYSINE 4 A MSE 82 A MSE 79 ? MET SELENOMETHIONINE 5 A MSE 88 A MSE 85 ? MET SELENOMETHIONINE 6 A ELY 93 A ELY 90 ? LYS N~6~,N~6~-DIETHYL-L-LYSINE 7 A MSE 108 A MSE 105 ? MET SELENOMETHIONINE 8 A ELY 187 A ELY 184 ? LYS N~6~,N~6~-DIETHYL-L-LYSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-05-25 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-10-10 4 'Structure model' 1 3 2013-02-06 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 4 'Structure model' repository Obsolete ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 13.5729 _pdbx_refine_tls.origin_y 52.1101 _pdbx_refine_tls.origin_z 13.3822 _pdbx_refine_tls.T[1][1] 0.1774 _pdbx_refine_tls.T[2][2] 0.1748 _pdbx_refine_tls.T[3][3] 0.1628 _pdbx_refine_tls.T[1][2] 0.0004 _pdbx_refine_tls.T[1][3] -0.0068 _pdbx_refine_tls.T[2][3] -0.0271 _pdbx_refine_tls.L[1][1] 2.0979 _pdbx_refine_tls.L[2][2] 1.2397 _pdbx_refine_tls.L[3][3] 2.4978 _pdbx_refine_tls.L[1][2] 0.6386 _pdbx_refine_tls.L[1][3] 0.2661 _pdbx_refine_tls.L[2][3] 0.8859 _pdbx_refine_tls.S[1][1] -0.0713 _pdbx_refine_tls.S[1][2] 0.0964 _pdbx_refine_tls.S[1][3] -0.0215 _pdbx_refine_tls.S[2][1] 0.0661 _pdbx_refine_tls.S[2][2] 0.1460 _pdbx_refine_tls.S[2][3] -0.0322 _pdbx_refine_tls.S[3][1] -0.0538 _pdbx_refine_tls.S[3][2] 0.2178 _pdbx_refine_tls.S[3][3] -0.0700 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details 'chain A' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SBC-Collect 'data collection' . ? 1 SHELXD/MLPHARE/DM/ARP/wARP/HKL3000 'model building' . ? 2 PHENIX refinement '(phenix.refine: 1.5_2)' ? 3 HKL-3000 'data reduction' . ? 4 HKL-3000 'data scaling' . ? 5 SHELXD/MLPHARE/DM/ARP/wARP/HKL3000 phasing . ? 6 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 47 ? ? -66.27 14.59 2 1 MSE A 79 ? ? -114.54 71.83 3 1 ASP A 157 ? ? -163.38 106.32 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ELY 38 ? CT2 ? A ELY 41 CT2 2 1 Y 1 A ELY 90 ? CT1 ? A ELY 93 CT1 3 1 Y 1 A ELY 90 ? CT2 ? A ELY 93 CT2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -2 ? A SER 1 2 1 Y 1 A ASN -1 ? A ASN 2 3 1 Y 1 A ALA 0 ? A ALA 3 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 'CHLORIDE ION' CL 4 'DI(HYDROXYETHYL)ETHER' PEG 5 'FORMIC ACID' FMT 6 water HOH #