HEADER TRANSFERASE, VIRAL PROTEIN 13-MAR-11 3R24 TITLE CRYSTAL STRUCTURE OF NSP10/NSP16 COMPLEX OF SARS CORONAVIRUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2'-O-METHYL TRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: NSP16; COMPND 5 EC: 2.1.1.-; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: NON-STRUCTURAL PROTEIN 10 AND NON-STRUCTURAL PROTEIN 11; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: UNP RESIDUES 4240-4382; COMPND 11 SYNONYM: NSP10, GROWTH FACTOR-LIKE PEPTIDE, GFL, NSP11; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SARS CORONAVIRUS; SOURCE 3 ORGANISM_COMMON: SARS-COV; SOURCE 4 ORGANISM_TAXID: 227859; SOURCE 5 GENE: REP, 1A-1B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET30; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: SARS CORONAVIRUS; SOURCE 13 ORGANISM_COMMON: SARS-COV; SOURCE 14 ORGANISM_TAXID: 227859; SOURCE 15 GENE: 1A; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET30 KEYWDS METHYLTRANSFERASE, ZINC-FINGER, TRANSFERASE, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR X.LIU,D.GUO,C.SU,Y.CHEN REVDAT 4 21-FEB-24 3R24 1 REMARK LINK REVDAT 3 01-APR-20 3R24 1 TITLE SEQADV REVDAT 2 23-JAN-13 3R24 1 JRNL REVDAT 1 26-OCT-11 3R24 0 JRNL AUTH Y.CHEN,C.SU,M.KE,X.JIN,L.XU,Z.ZHANG,A.WU,Y.SUN,Z.YANG, JRNL AUTH 2 P.TIEN,T.AHOLA,Y.LIANG,X.LIU,D.GUO JRNL TITL BIOCHEMICAL AND STRUCTURAL INSIGHTS INTO THE MECHANISMS OF JRNL TITL 2 SARS CORONAVIRUS RNA RIBOSE 2'-O-METHYLATION BY NSP16/NSP10 JRNL TITL 3 PROTEIN COMPLEX. JRNL REF PLOS PATHOG. V. 7 02294 2011 JRNL REFN ISSN 1553-7366 JRNL PMID 22022266 JRNL DOI 10.1371/JOURNAL.PPAT.1002294 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.10 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 54053 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 2745 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.1000 - 5.4261 0.97 2704 126 0.2214 0.2169 REMARK 3 2 5.4261 - 4.3079 0.96 2545 135 0.1675 0.2101 REMARK 3 3 4.3079 - 3.7636 0.99 2591 141 0.1679 0.1859 REMARK 3 4 3.7636 - 3.4196 1.00 2622 118 0.1736 0.1808 REMARK 3 5 3.4196 - 3.1746 1.00 2577 145 0.1967 0.2355 REMARK 3 6 3.1746 - 2.9874 1.00 2575 154 0.2049 0.2449 REMARK 3 7 2.9874 - 2.8379 1.00 2592 135 0.2056 0.2632 REMARK 3 8 2.8379 - 2.7143 0.99 2581 127 0.2007 0.2364 REMARK 3 9 2.7143 - 2.6099 1.00 2575 129 0.2027 0.2186 REMARK 3 10 2.6099 - 2.5198 1.00 2549 141 0.2020 0.2480 REMARK 3 11 2.5198 - 2.4410 1.00 2566 145 0.2044 0.2230 REMARK 3 12 2.4410 - 2.3712 0.99 2533 152 0.2083 0.2749 REMARK 3 13 2.3712 - 2.3088 0.99 2531 134 0.1924 0.2095 REMARK 3 14 2.3088 - 2.2525 1.00 2556 142 0.1818 0.2066 REMARK 3 15 2.2525 - 2.2013 0.99 2537 141 0.1827 0.1908 REMARK 3 16 2.2013 - 2.1544 0.99 2547 125 0.1775 0.2269 REMARK 3 17 2.1544 - 2.1113 1.00 2527 146 0.1780 0.1929 REMARK 3 18 2.1113 - 2.0715 0.99 2532 136 0.1815 0.2304 REMARK 3 19 2.0715 - 2.0345 0.99 2564 134 0.1933 0.2279 REMARK 3 20 2.0345 - 2.0000 0.99 2504 139 0.1912 0.2241 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 49.88 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 14.76050 REMARK 3 B22 (A**2) : -10.29300 REMARK 3 B33 (A**2) : -4.46750 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3308 REMARK 3 ANGLE : 1.165 4491 REMARK 3 CHIRALITY : 0.085 501 REMARK 3 PLANARITY : 0.004 568 REMARK 3 DIHEDRAL : 17.503 1175 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3R24 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-MAR-11. REMARK 100 THE DEPOSITION ID IS D_1000064392. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JAN-11; 04-MAR-11 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 4 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SSRF; BSRF REMARK 200 BEAMLINE : BL17U; 1W2B REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793; 0.9793 REMARK 200 MONOCHROMATOR : YALE MIRRORS; NULL REMARK 200 OPTICS : MIRRORS; MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R; MAR CCD 165 REMARK 200 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54053 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 46.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : 0.54000 REMARK 200 R SYM (I) : 0.54000 REMARK 200 FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 0.31000 REMARK 200 R SYM FOR SHELL (I) : 0.31000 REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0M NACL, 0.1M NAH2PO4, 0.1M K2HPO4, REMARK 280 0.1M MES, PH5.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.29500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.29500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 33.66500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 92.26000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 33.66500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 92.26000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 64.29500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 33.66500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 92.26000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 64.29500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 33.66500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 92.26000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -53.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 354 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -45 REMARK 465 HIS A -44 REMARK 465 HIS A -43 REMARK 465 HIS A -42 REMARK 465 HIS A -41 REMARK 465 HIS A -40 REMARK 465 HIS A -39 REMARK 465 SER A -38 REMARK 465 SER A -37 REMARK 465 GLY A -36 REMARK 465 LEU A -35 REMARK 465 VAL A -34 REMARK 465 PRO A -33 REMARK 465 ARG A -32 REMARK 465 GLY A -31 REMARK 465 SER A -30 REMARK 465 GLY A -29 REMARK 465 MET A -28 REMARK 465 LYS A -27 REMARK 465 GLU A -26 REMARK 465 THR A -25 REMARK 465 ALA A -24 REMARK 465 ALA A -23 REMARK 465 ALA A -22 REMARK 465 LYS A -21 REMARK 465 PHE A -20 REMARK 465 GLU A -19 REMARK 465 ARG A -18 REMARK 465 GLN A -17 REMARK 465 HIS A -16 REMARK 465 MET A -15 REMARK 465 ASP A -14 REMARK 465 SER A -13 REMARK 465 PRO A -12 REMARK 465 ASP A -11 REMARK 465 LEU A -10 REMARK 465 GLY A -9 REMARK 465 THR A -8 REMARK 465 ASP A -7 REMARK 465 ASP A -6 REMARK 465 ASP A -5 REMARK 465 ASP A -4 REMARK 465 LYS A -3 REMARK 465 ALA A -2 REMARK 465 MET A -1 REMARK 465 ALA A 0 REMARK 465 ALA A 1 REMARK 465 SER A 2 REMARK 465 LEU A 295 REMARK 465 VAL A 296 REMARK 465 ASN A 297 REMARK 465 ASN A 298 REMARK 465 MET B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 ASP B 1 REMARK 465 LYS B 2 REMARK 465 ILE B 3 REMARK 465 HIS B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 CYS B 130 REMARK 465 ASP B 131 REMARK 465 GLN B 132 REMARK 465 LEU B 133 REMARK 465 ARG B 134 REMARK 465 GLU B 135 REMARK 465 PRO B 136 REMARK 465 LEU B 137 REMARK 465 MET B 138 REMARK 465 GLN B 139 REMARK 465 SER B 140 REMARK 465 ALA B 141 REMARK 465 ASP B 142 REMARK 465 ALA B 143 REMARK 465 SER B 144 REMARK 465 THR B 145 REMARK 465 PHE B 146 REMARK 465 LEU B 147 REMARK 465 ASN B 148 REMARK 465 GLY B 149 REMARK 465 PHE B 150 REMARK 465 ALA B 151 REMARK 465 VAL B 152 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS B 9 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 316 O HOH A 340 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 30 -147.16 -73.45 REMARK 500 ASN A 33 78.12 19.84 REMARK 500 THR A 58 58.61 -90.35 REMARK 500 VAL A 139 100.87 39.81 REMARK 500 LYS A 141 -90.74 -32.57 REMARK 500 GLU A 147 -120.01 -99.18 REMARK 500 ALA A 192 27.58 104.09 REMARK 500 ASN A 210 84.55 70.29 REMARK 500 HIS B 48 50.74 -105.33 REMARK 500 LYS B 87 -157.56 -101.83 REMARK 500 TYR B 126 58.25 -142.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 277 GLY A 278 -30.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 998 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 74 SG REMARK 620 2 CYS B 77 SG 113.5 REMARK 620 3 HIS B 83 NE2 108.9 104.3 REMARK 620 4 CYS B 90 SG 109.7 115.1 104.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 999 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 117 SG REMARK 620 2 CYS B 120 SG 132.6 REMARK 620 3 CYS B 128 SG 113.4 104.9 REMARK 620 4 HOH B 283 O 106.5 83.7 110.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAM A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 998 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 999 DBREF 3R24 A 1 298 UNP P0C6X7 R1AB_CVHSA 6776 7073 DBREF 3R24 B 10 152 UNP P0C6U8 R1A_CVHSA 4240 4382 SEQADV 3R24 MET A -45 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 HIS A -44 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 HIS A -43 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 HIS A -42 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 HIS A -41 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 HIS A -40 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 HIS A -39 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 SER A -38 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 SER A -37 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 GLY A -36 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 LEU A -35 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 VAL A -34 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 PRO A -33 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 ARG A -32 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 GLY A -31 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 SER A -30 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 GLY A -29 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 MET A -28 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 LYS A -27 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 GLU A -26 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 THR A -25 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 ALA A -24 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 ALA A -23 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 ALA A -22 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 LYS A -21 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 PHE A -20 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 GLU A -19 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 ARG A -18 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 GLN A -17 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 HIS A -16 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 MET A -15 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 ASP A -14 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 SER A -13 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 PRO A -12 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 ASP A -11 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 LEU A -10 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 GLY A -9 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 THR A -8 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 ASP A -7 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 ASP A -6 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 ASP A -5 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 ASP A -4 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 LYS A -3 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 ALA A -2 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 MET A -1 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 ALA A 0 UNP P0C6X7 EXPRESSION TAG SEQADV 3R24 MET B -2 UNP P0C6U8 EXPRESSION TAG SEQADV 3R24 GLY B -1 UNP P0C6U8 EXPRESSION TAG SEQADV 3R24 SER B 0 UNP P0C6U8 EXPRESSION TAG SEQADV 3R24 ASP B 1 UNP P0C6U8 EXPRESSION TAG SEQADV 3R24 LYS B 2 UNP P0C6U8 EXPRESSION TAG SEQADV 3R24 ILE B 3 UNP P0C6U8 EXPRESSION TAG SEQADV 3R24 HIS B 4 UNP P0C6U8 EXPRESSION TAG SEQADV 3R24 HIS B 5 UNP P0C6U8 EXPRESSION TAG SEQADV 3R24 HIS B 6 UNP P0C6U8 EXPRESSION TAG SEQADV 3R24 HIS B 7 UNP P0C6U8 EXPRESSION TAG SEQADV 3R24 HIS B 8 UNP P0C6U8 EXPRESSION TAG SEQADV 3R24 HIS B 9 UNP P0C6U8 EXPRESSION TAG SEQRES 1 A 344 MET HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO SEQRES 2 A 344 ARG GLY SER GLY MET LYS GLU THR ALA ALA ALA LYS PHE SEQRES 3 A 344 GLU ARG GLN HIS MET ASP SER PRO ASP LEU GLY THR ASP SEQRES 4 A 344 ASP ASP ASP LYS ALA MET ALA ALA SER GLN ALA TRP GLN SEQRES 5 A 344 PRO GLY VAL ALA MET PRO ASN LEU TYR LYS MET GLN ARG SEQRES 6 A 344 MET LEU LEU GLU LYS CYS ASP LEU GLN ASN TYR GLY GLU SEQRES 7 A 344 ASN ALA VAL ILE PRO LYS GLY ILE MET MET ASN VAL ALA SEQRES 8 A 344 LYS TYR THR GLN LEU CYS GLN TYR LEU ASN THR LEU THR SEQRES 9 A 344 LEU ALA VAL PRO TYR ASN MET ARG VAL ILE HIS PHE GLY SEQRES 10 A 344 ALA GLY SER ASP LYS GLY VAL ALA PRO GLY THR ALA VAL SEQRES 11 A 344 LEU ARG GLN TRP LEU PRO THR GLY THR LEU LEU VAL ASP SEQRES 12 A 344 SER ASP LEU ASN ASP PHE VAL SER ASP ALA ASP SER THR SEQRES 13 A 344 LEU ILE GLY ASP CYS ALA THR VAL HIS THR ALA ASN LYS SEQRES 14 A 344 TRP ASP LEU ILE ILE SER ASP MET TYR ASP PRO ARG THR SEQRES 15 A 344 LYS HIS VAL THR LYS GLU ASN ASP SER LYS GLU GLY PHE SEQRES 16 A 344 PHE THR TYR LEU CYS GLY PHE ILE LYS GLN LYS LEU ALA SEQRES 17 A 344 LEU GLY GLY SER ILE ALA VAL LYS ILE THR GLU HIS SER SEQRES 18 A 344 TRP ASN ALA ASP LEU TYR LYS LEU MET GLY HIS PHE SER SEQRES 19 A 344 TRP TRP THR ALA PHE VAL THR ASN VAL ASN ALA SER SER SEQRES 20 A 344 SER GLU ALA PHE LEU ILE GLY ALA ASN TYR LEU GLY LYS SEQRES 21 A 344 PRO LYS GLU GLN ILE ASP GLY TYR THR MET HIS ALA ASN SEQRES 22 A 344 TYR ILE PHE TRP ARG ASN THR ASN PRO ILE GLN LEU SER SEQRES 23 A 344 SER TYR SER LEU PHE ASP MET SER LYS PHE PRO LEU LYS SEQRES 24 A 344 LEU ARG GLY THR ALA VAL MET SER LEU LYS GLU ASN GLN SEQRES 25 A 344 ILE ASN ASP MET ILE TYR SER LEU LEU GLU LYS GLY ARG SEQRES 26 A 344 LEU ILE ILE ARG GLU ASN ASN ARG VAL VAL VAL SER SER SEQRES 27 A 344 ASP ILE LEU VAL ASN ASN SEQRES 1 B 155 MET GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS ASN SEQRES 2 B 155 SER THR VAL LEU SER PHE CYS ALA PHE ALA VAL ASP PRO SEQRES 3 B 155 ALA LYS ALA TYR LYS ASP TYR LEU ALA SER GLY GLY GLN SEQRES 4 B 155 PRO ILE THR ASN CYS VAL LYS MET LEU CYS THR HIS THR SEQRES 5 B 155 GLY THR GLY GLN ALA ILE THR VAL THR PRO GLU ALA ASN SEQRES 6 B 155 MET ASP GLN GLU SER PHE GLY GLY ALA SER CYS CYS LEU SEQRES 7 B 155 TYR CYS ARG CYS HIS ILE ASP HIS PRO ASN PRO LYS GLY SEQRES 8 B 155 PHE CYS ASP LEU LYS GLY LYS TYR VAL GLN ILE PRO THR SEQRES 9 B 155 THR CYS ALA ASN ASP PRO VAL GLY PHE THR LEU ARG ASN SEQRES 10 B 155 THR VAL CYS THR VAL CYS GLY MET TRP LYS GLY TYR GLY SEQRES 11 B 155 CYS SER CYS ASP GLN LEU ARG GLU PRO LEU MET GLN SER SEQRES 12 B 155 ALA ASP ALA SER THR PHE LEU ASN GLY PHE ALA VAL HET SAM A 302 27 HET ZN B 998 1 HET ZN B 999 1 HETNAM SAM S-ADENOSYLMETHIONINE HETNAM ZN ZINC ION FORMUL 3 SAM C15 H22 N6 O5 S FORMUL 4 ZN 2(ZN 2+) FORMUL 6 HOH *467(H2 O) HELIX 1 1 PRO A 12 MET A 17 1 6 HELIX 2 2 MET A 41 ASN A 55 1 15 HELIX 3 3 ALA A 79 LEU A 89 1 11 HELIX 4 4 ASP A 114 ALA A 116 5 3 HELIX 5 5 GLY A 148 LYS A 160 1 13 HELIX 6 6 ASN A 177 GLY A 185 1 9 HELIX 7 7 VAL A 197 ALA A 199 5 3 HELIX 8 8 ASP A 220 ASN A 235 1 16 HELIX 9 9 SER A 241 ASP A 246 5 6 HELIX 10 10 LYS A 263 ILE A 267 5 5 HELIX 11 11 ASN A 268 LYS A 277 1 10 HELIX 12 12 ASN B 10 PHE B 19 1 10 HELIX 13 13 ASP B 22 SER B 33 1 12 HELIX 14 14 ALA B 71 CYS B 73 5 3 HELIX 15 15 CYS B 74 HIS B 80 1 7 HELIX 16 16 THR B 102 ALA B 104 5 3 HELIX 17 17 ASP B 106 ASN B 114 1 9 SHEET 1 A 8 GLY A 8 ALA A 10 0 SHEET 2 A 8 PHE A 187 THR A 195 -1 O VAL A 194 N VAL A 9 SHEET 3 A 8 ALA A 204 TYR A 211 -1 O ILE A 207 N THR A 191 SHEET 4 A 8 LEU A 161 ILE A 171 -1 N VAL A 169 O LEU A 206 SHEET 5 A 8 TRP A 124 SER A 129 1 N SER A 129 O ALA A 168 SHEET 6 A 8 ARG A 66 PHE A 70 1 N PHE A 70 O ILE A 128 SHEET 7 A 8 LEU A 94 ASP A 99 1 O LEU A 94 N VAL A 67 SHEET 8 A 8 SER A 109 ILE A 112 1 O LEU A 111 N ASP A 97 SHEET 1 B 2 VAL A 118 THR A 120 0 SHEET 2 B 2 VAL A 290 SER A 292 -1 O SER A 291 N HIS A 119 SHEET 1 C 2 ALA A 258 MET A 260 0 SHEET 2 C 2 LEU A 280 ILE A 282 1 O ILE A 281 N MET A 260 SHEET 1 D 3 ILE B 55 THR B 56 0 SHEET 2 D 3 TYR B 96 PRO B 100 -1 O TYR B 96 N THR B 56 SHEET 3 D 3 GLN B 65 GLY B 69 -1 N GLU B 66 O ILE B 99 LINK SG CYS B 74 ZN ZN B 998 1555 1555 2.31 LINK SG CYS B 77 ZN ZN B 998 1555 1555 2.33 LINK NE2 HIS B 83 ZN ZN B 998 1555 1555 2.16 LINK SG CYS B 90 ZN ZN B 998 1555 1555 2.37 LINK SG CYS B 117 ZN ZN B 999 1555 1555 2.32 LINK SG CYS B 120 ZN ZN B 999 1555 1555 2.89 LINK SG CYS B 128 ZN ZN B 999 1555 1555 2.30 LINK O HOH B 283 ZN ZN B 999 1555 1555 2.64 CISPEP 1 GLY A 31 GLU A 32 0 -1.33 CISPEP 2 THR A 191 ALA A 192 0 2.01 CISPEP 3 ASP A 293 ILE A 294 0 1.42 SITE 1 AC1 20 ASN A 43 TYR A 47 GLY A 71 GLY A 73 SITE 2 AC1 20 PRO A 80 GLY A 81 ASP A 99 LEU A 100 SITE 3 AC1 20 ASN A 101 ASP A 114 CYS A 115 ASP A 130 SITE 4 AC1 20 MET A 131 TYR A 132 LYS A 170 HOH A 303 SITE 5 AC1 20 HOH A 427 HOH A 479 HOH A 555 HOH A 631 SITE 1 AC2 4 CYS B 74 CYS B 77 HIS B 83 CYS B 90 SITE 1 AC3 6 CYS B 117 VAL B 119 CYS B 120 CYS B 128 SITE 2 AC3 6 SER B 129 HOH B 283 CRYST1 67.330 184.520 128.590 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014852 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005419 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007777 0.00000