data_3R4L # _entry.id 3R4L # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3R4L pdb_00003r4l 10.2210/pdb3r4l/pdb RCSB RCSB064481 ? ? WWPDB D_1000064481 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-11-02 2 'Structure model' 1 1 2017-11-08 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2023-09-13 5 'Structure model' 2 2 2024-10-30 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Refinement description' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Atomic model' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Database references' 6 3 'Structure model' 'Derived calculations' 7 3 'Structure model' 'Non-polymer description' 8 3 'Structure model' 'Structure summary' 9 4 'Structure model' 'Data collection' 10 4 'Structure model' 'Database references' 11 4 'Structure model' 'Refinement description' 12 4 'Structure model' 'Structure summary' 13 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' software 2 3 'Structure model' atom_site 3 3 'Structure model' chem_comp 4 3 'Structure model' database_PDB_caveat 5 3 'Structure model' entity 6 3 'Structure model' pdbx_branch_scheme 7 3 'Structure model' pdbx_chem_comp_identifier 8 3 'Structure model' pdbx_entity_branch 9 3 'Structure model' pdbx_entity_branch_descriptor 10 3 'Structure model' pdbx_entity_branch_link 11 3 'Structure model' pdbx_entity_branch_list 12 3 'Structure model' pdbx_entity_nonpoly 13 3 'Structure model' pdbx_nonpoly_scheme 14 3 'Structure model' pdbx_struct_assembly_gen 15 3 'Structure model' pdbx_validate_chiral 16 3 'Structure model' struct_asym 17 3 'Structure model' struct_conn 18 3 'Structure model' struct_ref_seq_dif 19 3 'Structure model' struct_site 20 3 'Structure model' struct_site_gen 21 4 'Structure model' chem_comp 22 4 'Structure model' chem_comp_atom 23 4 'Structure model' chem_comp_bond 24 4 'Structure model' database_2 25 4 'Structure model' pdbx_initial_refinement_model 26 5 'Structure model' pdbx_entry_details 27 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_software.name' 2 3 'Structure model' '_atom_site.B_iso_or_equiv' 3 3 'Structure model' '_atom_site.Cartn_x' 4 3 'Structure model' '_atom_site.Cartn_y' 5 3 'Structure model' '_atom_site.Cartn_z' 6 3 'Structure model' '_atom_site.auth_asym_id' 7 3 'Structure model' '_atom_site.auth_atom_id' 8 3 'Structure model' '_atom_site.auth_comp_id' 9 3 'Structure model' '_atom_site.auth_seq_id' 10 3 'Structure model' '_atom_site.label_asym_id' 11 3 'Structure model' '_atom_site.label_atom_id' 12 3 'Structure model' '_atom_site.label_comp_id' 13 3 'Structure model' '_atom_site.label_entity_id' 14 3 'Structure model' '_atom_site.type_symbol' 15 3 'Structure model' '_chem_comp.formula' 16 3 'Structure model' '_chem_comp.formula_weight' 17 3 'Structure model' '_chem_comp.id' 18 3 'Structure model' '_chem_comp.mon_nstd_flag' 19 3 'Structure model' '_chem_comp.name' 20 3 'Structure model' '_chem_comp.type' 21 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 22 3 'Structure model' '_struct_conn.pdbx_dist_value' 23 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 24 3 'Structure model' '_struct_conn.pdbx_role' 25 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 26 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 27 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 30 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 31 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 32 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 33 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 37 3 'Structure model' '_struct_ref_seq_dif.details' 38 4 'Structure model' '_chem_comp.pdbx_synonyms' 39 4 'Structure model' '_database_2.pdbx_DOI' 40 4 'Structure model' '_database_2.pdbx_database_accession' # _database_PDB_caveat.id 1 _database_PDB_caveat.text 'NAG B 1 HAS WRONG CHIRALITY AT ATOM C1' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3R4L _pdbx_database_status.recvd_initial_deposition_date 2011-03-17 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3Q02 'PLASMINOGEN ACTIVATOR INHIBITOR-1 IN A METASTABLE ACTIVE CONFORMATION, MUTANT W175F' unspecified PDB 1DVM 'PLASMINOGEN ACTIVATOR INHIBITOR-1, ACTIVE, MUTANT N150H, K154T, Q319L, M354I' unspecified PDB 1B3K 'PLASMINOGEN ACTIVATOR INHIBITOR-1, ACTIVE, MUTANT N150H, K154T, Q319L, M354I' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Yang, J.' 1 'Zheng, H.' 2 'Han, Q.' 3 'Skrzypczak-Jankun, E.' 4 'Jankun, J.' 5 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Remarkable extension of PAI-1 half-life surprisingly brings no changes to its structure.' Int.J.Mol.Med. 29 61 64 2012 ? GR 1107-3756 ? ? 21947232 10.3892/ijmm.2011.798 1 ;A novel form of the plasminogen activator inhibitor created by cysteine mutations extends its half-life: relevance to cancer and angiogenesis. ; 'Mol.Cancer Ther.' 2 19 28 2003 ? US 1535-7163 ? ? 12533669 ? 2 'VLHL plasminogen activator inhibitor spontaneously reactivates from the latent to active form.' Int.J.Mol.Med. 23 57 63 2009 ? GR 1107-3756 ? ? 19082507 ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jankun, J.' 1 ? primary 'Yang, J.' 2 ? primary 'Zheng, H.' 3 ? primary 'Han, F.Q.' 4 ? primary 'Al-Senaidy, A.' 5 ? primary 'Skrzypczak-Jankun, E.' 6 ? 1 'Chorostowska-Wynimko, J.' 7 ? 1 'Swiercz, R.' 8 ? 1 'Skrzypczak-Jankun, E.' 9 ? 1 'Wojtowicz, A.' 10 ? 1 'Selman, S.H.' 11 ? 1 'Jankun, J.' 12 ? 2 'Jankun, J.' 13 ? 2 'Aleem, A.M.' 14 ? 2 'Selman, S.H.' 15 ? 2 'Basrur, V.' 16 ? 2 'Skrzypczak-Jankun, E.' 17 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Plasminogen activator inhibitor 1' 42840.172 1 ? 'Q197C, G355C' 'UNP Residues 24-402' 'Active form' 2 branched man ;beta-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose ; 894.823 1 ? ? ? ? 3 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 4 water nat water 18.015 17 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PAI, PAI-1, Endothelial plasminogen activator inhibitor, Serpin E1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;VHHPPSYVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYK ELMGPWNKDEISTTDAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISNLLGKGAVDQL TRLVLVNALYFNGCWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFTTPDGHYYDILELPYHGDTLSMFIAAP YEKEVPLSALTNILSAQLISHWKGNMTRLPRLLVLPKFSLETEVDLRKPLENLGMTDMFRQFQADFTSLSDQEPLHVAQA LQKVKIEVNESCTVASSSTAVIVSARMAPEEIIMDRPFLFVVRHNPTGTVLFMGQVMEP ; _entity_poly.pdbx_seq_one_letter_code_can ;VHHPPSYVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYK ELMGPWNKDEISTTDAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISNLLGKGAVDQL TRLVLVNALYFNGCWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFTTPDGHYYDILELPYHGDTLSMFIAAP YEKEVPLSALTNILSAQLISHWKGNMTRLPRLLVLPKFSLETEVDLRKPLENLGMTDMFRQFQADFTSLSDQEPLHVAQA LQKVKIEVNESCTVASSSTAVIVSARMAPEEIIMDRPFLFVVRHNPTGTVLFMGQVMEP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 HIS n 1 3 HIS n 1 4 PRO n 1 5 PRO n 1 6 SER n 1 7 TYR n 1 8 VAL n 1 9 ALA n 1 10 HIS n 1 11 LEU n 1 12 ALA n 1 13 SER n 1 14 ASP n 1 15 PHE n 1 16 GLY n 1 17 VAL n 1 18 ARG n 1 19 VAL n 1 20 PHE n 1 21 GLN n 1 22 GLN n 1 23 VAL n 1 24 ALA n 1 25 GLN n 1 26 ALA n 1 27 SER n 1 28 LYS n 1 29 ASP n 1 30 ARG n 1 31 ASN n 1 32 VAL n 1 33 VAL n 1 34 PHE n 1 35 SER n 1 36 PRO n 1 37 TYR n 1 38 GLY n 1 39 VAL n 1 40 ALA n 1 41 SER n 1 42 VAL n 1 43 LEU n 1 44 ALA n 1 45 MET n 1 46 LEU n 1 47 GLN n 1 48 LEU n 1 49 THR n 1 50 THR n 1 51 GLY n 1 52 GLY n 1 53 GLU n 1 54 THR n 1 55 GLN n 1 56 GLN n 1 57 GLN n 1 58 ILE n 1 59 GLN n 1 60 ALA n 1 61 ALA n 1 62 MET n 1 63 GLY n 1 64 PHE n 1 65 LYS n 1 66 ILE n 1 67 ASP n 1 68 ASP n 1 69 LYS n 1 70 GLY n 1 71 MET n 1 72 ALA n 1 73 PRO n 1 74 ALA n 1 75 LEU n 1 76 ARG n 1 77 HIS n 1 78 LEU n 1 79 TYR n 1 80 LYS n 1 81 GLU n 1 82 LEU n 1 83 MET n 1 84 GLY n 1 85 PRO n 1 86 TRP n 1 87 ASN n 1 88 LYS n 1 89 ASP n 1 90 GLU n 1 91 ILE n 1 92 SER n 1 93 THR n 1 94 THR n 1 95 ASP n 1 96 ALA n 1 97 ILE n 1 98 PHE n 1 99 VAL n 1 100 GLN n 1 101 ARG n 1 102 ASP n 1 103 LEU n 1 104 LYS n 1 105 LEU n 1 106 VAL n 1 107 GLN n 1 108 GLY n 1 109 PHE n 1 110 MET n 1 111 PRO n 1 112 HIS n 1 113 PHE n 1 114 PHE n 1 115 ARG n 1 116 LEU n 1 117 PHE n 1 118 ARG n 1 119 SER n 1 120 THR n 1 121 VAL n 1 122 LYS n 1 123 GLN n 1 124 VAL n 1 125 ASP n 1 126 PHE n 1 127 SER n 1 128 GLU n 1 129 VAL n 1 130 GLU n 1 131 ARG n 1 132 ALA n 1 133 ARG n 1 134 PHE n 1 135 ILE n 1 136 ILE n 1 137 ASN n 1 138 ASP n 1 139 TRP n 1 140 VAL n 1 141 LYS n 1 142 THR n 1 143 HIS n 1 144 THR n 1 145 LYS n 1 146 GLY n 1 147 MET n 1 148 ILE n 1 149 SER n 1 150 ASN n 1 151 LEU n 1 152 LEU n 1 153 GLY n 1 154 LYS n 1 155 GLY n 1 156 ALA n 1 157 VAL n 1 158 ASP n 1 159 GLN n 1 160 LEU n 1 161 THR n 1 162 ARG n 1 163 LEU n 1 164 VAL n 1 165 LEU n 1 166 VAL n 1 167 ASN n 1 168 ALA n 1 169 LEU n 1 170 TYR n 1 171 PHE n 1 172 ASN n 1 173 GLY n 1 174 CYS n 1 175 TRP n 1 176 LYS n 1 177 THR n 1 178 PRO n 1 179 PHE n 1 180 PRO n 1 181 ASP n 1 182 SER n 1 183 SER n 1 184 THR n 1 185 HIS n 1 186 ARG n 1 187 ARG n 1 188 LEU n 1 189 PHE n 1 190 HIS n 1 191 LYS n 1 192 SER n 1 193 ASP n 1 194 GLY n 1 195 SER n 1 196 THR n 1 197 VAL n 1 198 SER n 1 199 VAL n 1 200 PRO n 1 201 MET n 1 202 MET n 1 203 ALA n 1 204 GLN n 1 205 THR n 1 206 ASN n 1 207 LYS n 1 208 PHE n 1 209 ASN n 1 210 TYR n 1 211 THR n 1 212 GLU n 1 213 PHE n 1 214 THR n 1 215 THR n 1 216 PRO n 1 217 ASP n 1 218 GLY n 1 219 HIS n 1 220 TYR n 1 221 TYR n 1 222 ASP n 1 223 ILE n 1 224 LEU n 1 225 GLU n 1 226 LEU n 1 227 PRO n 1 228 TYR n 1 229 HIS n 1 230 GLY n 1 231 ASP n 1 232 THR n 1 233 LEU n 1 234 SER n 1 235 MET n 1 236 PHE n 1 237 ILE n 1 238 ALA n 1 239 ALA n 1 240 PRO n 1 241 TYR n 1 242 GLU n 1 243 LYS n 1 244 GLU n 1 245 VAL n 1 246 PRO n 1 247 LEU n 1 248 SER n 1 249 ALA n 1 250 LEU n 1 251 THR n 1 252 ASN n 1 253 ILE n 1 254 LEU n 1 255 SER n 1 256 ALA n 1 257 GLN n 1 258 LEU n 1 259 ILE n 1 260 SER n 1 261 HIS n 1 262 TRP n 1 263 LYS n 1 264 GLY n 1 265 ASN n 1 266 MET n 1 267 THR n 1 268 ARG n 1 269 LEU n 1 270 PRO n 1 271 ARG n 1 272 LEU n 1 273 LEU n 1 274 VAL n 1 275 LEU n 1 276 PRO n 1 277 LYS n 1 278 PHE n 1 279 SER n 1 280 LEU n 1 281 GLU n 1 282 THR n 1 283 GLU n 1 284 VAL n 1 285 ASP n 1 286 LEU n 1 287 ARG n 1 288 LYS n 1 289 PRO n 1 290 LEU n 1 291 GLU n 1 292 ASN n 1 293 LEU n 1 294 GLY n 1 295 MET n 1 296 THR n 1 297 ASP n 1 298 MET n 1 299 PHE n 1 300 ARG n 1 301 GLN n 1 302 PHE n 1 303 GLN n 1 304 ALA n 1 305 ASP n 1 306 PHE n 1 307 THR n 1 308 SER n 1 309 LEU n 1 310 SER n 1 311 ASP n 1 312 GLN n 1 313 GLU n 1 314 PRO n 1 315 LEU n 1 316 HIS n 1 317 VAL n 1 318 ALA n 1 319 GLN n 1 320 ALA n 1 321 LEU n 1 322 GLN n 1 323 LYS n 1 324 VAL n 1 325 LYS n 1 326 ILE n 1 327 GLU n 1 328 VAL n 1 329 ASN n 1 330 GLU n 1 331 SER n 1 332 CYS n 1 333 THR n 1 334 VAL n 1 335 ALA n 1 336 SER n 1 337 SER n 1 338 SER n 1 339 THR n 1 340 ALA n 1 341 VAL n 1 342 ILE n 1 343 VAL n 1 344 SER n 1 345 ALA n 1 346 ARG n 1 347 MET n 1 348 ALA n 1 349 PRO n 1 350 GLU n 1 351 GLU n 1 352 ILE n 1 353 ILE n 1 354 MET n 1 355 ASP n 1 356 ARG n 1 357 PRO n 1 358 PHE n 1 359 LEU n 1 360 PHE n 1 361 VAL n 1 362 VAL n 1 363 ARG n 1 364 HIS n 1 365 ASN n 1 366 PRO n 1 367 THR n 1 368 GLY n 1 369 THR n 1 370 VAL n 1 371 LEU n 1 372 PHE n 1 373 MET n 1 374 GLY n 1 375 GLN n 1 376 VAL n 1 377 MET n 1 378 GLU n 1 379 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PAI1, PLANH1, SERPINE1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'FALL ARMYWORM' _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line SF9 _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type BACULOVIRUS _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PFASTBAC1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'DManpb1-6DManpb1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/3,5,4/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1221m-1a_1-5]/1-1-2-2-3/a4-b1_a6-e1_b4-c1_c6-d1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][a-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(6+1)][b-D-Manp]{}}}[(6+1)][a-L-Fucp]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 2 4 BMA C1 O1 3 BMA O6 HO6 sing ? 4 2 5 FUC C1 O1 1 NAG O6 HO6 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 24 ? ? ? A . n A 1 2 HIS 2 25 ? ? ? A . n A 1 3 HIS 3 26 26 HIS HIS A . n A 1 4 PRO 4 27 27 PRO PRO A . n A 1 5 PRO 5 28 28 PRO PRO A . n A 1 6 SER 6 29 29 SER SER A . n A 1 7 TYR 7 30 30 TYR TYR A . n A 1 8 VAL 8 31 31 VAL VAL A . n A 1 9 ALA 9 32 32 ALA ALA A . n A 1 10 HIS 10 33 33 HIS HIS A . n A 1 11 LEU 11 34 34 LEU LEU A . n A 1 12 ALA 12 35 35 ALA ALA A . n A 1 13 SER 13 36 36 SER SER A . n A 1 14 ASP 14 37 37 ASP ASP A . n A 1 15 PHE 15 38 38 PHE PHE A . n A 1 16 GLY 16 39 39 GLY GLY A . n A 1 17 VAL 17 40 40 VAL VAL A . n A 1 18 ARG 18 41 41 ARG ARG A . n A 1 19 VAL 19 42 42 VAL VAL A . n A 1 20 PHE 20 43 43 PHE PHE A . n A 1 21 GLN 21 44 44 GLN GLN A . n A 1 22 GLN 22 45 45 GLN GLN A . n A 1 23 VAL 23 46 46 VAL VAL A . n A 1 24 ALA 24 47 47 ALA ALA A . n A 1 25 GLN 25 48 48 GLN GLN A . n A 1 26 ALA 26 49 49 ALA ALA A . n A 1 27 SER 27 50 50 SER SER A . n A 1 28 LYS 28 51 51 LYS LYS A . n A 1 29 ASP 29 52 52 ASP ASP A . n A 1 30 ARG 30 53 53 ARG ARG A . n A 1 31 ASN 31 54 54 ASN ASN A . n A 1 32 VAL 32 55 55 VAL VAL A . n A 1 33 VAL 33 56 56 VAL VAL A . n A 1 34 PHE 34 57 57 PHE PHE A . n A 1 35 SER 35 58 58 SER SER A . n A 1 36 PRO 36 59 59 PRO PRO A . n A 1 37 TYR 37 60 60 TYR TYR A . n A 1 38 GLY 38 61 61 GLY GLY A . n A 1 39 VAL 39 62 62 VAL VAL A . n A 1 40 ALA 40 63 63 ALA ALA A . n A 1 41 SER 41 64 64 SER SER A . n A 1 42 VAL 42 65 65 VAL VAL A . n A 1 43 LEU 43 66 66 LEU LEU A . n A 1 44 ALA 44 67 67 ALA ALA A . n A 1 45 MET 45 68 68 MET MET A . n A 1 46 LEU 46 69 69 LEU LEU A . n A 1 47 GLN 47 70 70 GLN GLN A . n A 1 48 LEU 48 71 71 LEU LEU A . n A 1 49 THR 49 72 72 THR THR A . n A 1 50 THR 50 73 73 THR THR A . n A 1 51 GLY 51 74 74 GLY GLY A . n A 1 52 GLY 52 75 75 GLY GLY A . n A 1 53 GLU 53 76 76 GLU GLU A . n A 1 54 THR 54 77 77 THR THR A . n A 1 55 GLN 55 78 78 GLN GLN A . n A 1 56 GLN 56 79 79 GLN GLN A . n A 1 57 GLN 57 80 80 GLN GLN A . n A 1 58 ILE 58 81 81 ILE ILE A . n A 1 59 GLN 59 82 82 GLN GLN A . n A 1 60 ALA 60 83 83 ALA ALA A . n A 1 61 ALA 61 84 84 ALA ALA A . n A 1 62 MET 62 85 85 MET MET A . n A 1 63 GLY 63 86 86 GLY GLY A . n A 1 64 PHE 64 87 87 PHE PHE A . n A 1 65 LYS 65 88 88 LYS LYS A . n A 1 66 ILE 66 89 89 ILE ILE A . n A 1 67 ASP 67 90 90 ASP ASP A . n A 1 68 ASP 68 91 91 ASP ASP A . n A 1 69 LYS 69 92 92 LYS LYS A . n A 1 70 GLY 70 93 93 GLY GLY A . n A 1 71 MET 71 94 94 MET MET A . n A 1 72 ALA 72 95 95 ALA ALA A . n A 1 73 PRO 73 96 96 PRO PRO A . n A 1 74 ALA 74 97 97 ALA ALA A . n A 1 75 LEU 75 98 98 LEU LEU A . n A 1 76 ARG 76 99 99 ARG ARG A . n A 1 77 HIS 77 100 100 HIS HIS A . n A 1 78 LEU 78 101 101 LEU LEU A . n A 1 79 TYR 79 102 102 TYR TYR A . n A 1 80 LYS 80 103 103 LYS LYS A . n A 1 81 GLU 81 104 104 GLU GLU A . n A 1 82 LEU 82 105 105 LEU LEU A . n A 1 83 MET 83 106 106 MET MET A . n A 1 84 GLY 84 107 107 GLY GLY A . n A 1 85 PRO 85 108 108 PRO PRO A . n A 1 86 TRP 86 109 109 TRP TRP A . n A 1 87 ASN 87 110 110 ASN ASN A . n A 1 88 LYS 88 111 111 LYS LYS A . n A 1 89 ASP 89 112 112 ASP ASP A . n A 1 90 GLU 90 113 113 GLU GLU A . n A 1 91 ILE 91 114 114 ILE ILE A . n A 1 92 SER 92 115 115 SER SER A . n A 1 93 THR 93 116 116 THR THR A . n A 1 94 THR 94 117 117 THR THR A . n A 1 95 ASP 95 118 118 ASP ASP A . n A 1 96 ALA 96 119 119 ALA ALA A . n A 1 97 ILE 97 120 120 ILE ILE A . n A 1 98 PHE 98 121 121 PHE PHE A . n A 1 99 VAL 99 122 122 VAL VAL A . n A 1 100 GLN 100 123 123 GLN GLN A . n A 1 101 ARG 101 124 124 ARG ARG A . n A 1 102 ASP 102 125 125 ASP ASP A . n A 1 103 LEU 103 126 126 LEU LEU A . n A 1 104 LYS 104 127 127 LYS LYS A . n A 1 105 LEU 105 128 128 LEU LEU A . n A 1 106 VAL 106 129 129 VAL VAL A . n A 1 107 GLN 107 130 130 GLN GLN A . n A 1 108 GLY 108 131 131 GLY GLY A . n A 1 109 PHE 109 132 132 PHE PHE A . n A 1 110 MET 110 133 133 MET MET A . n A 1 111 PRO 111 134 134 PRO PRO A . n A 1 112 HIS 112 135 135 HIS HIS A . n A 1 113 PHE 113 136 136 PHE PHE A . n A 1 114 PHE 114 137 137 PHE PHE A . n A 1 115 ARG 115 138 138 ARG ARG A . n A 1 116 LEU 116 139 139 LEU LEU A . n A 1 117 PHE 117 140 140 PHE PHE A . n A 1 118 ARG 118 141 141 ARG ARG A . n A 1 119 SER 119 142 142 SER SER A . n A 1 120 THR 120 143 143 THR THR A . n A 1 121 VAL 121 144 144 VAL VAL A . n A 1 122 LYS 122 145 145 LYS LYS A . n A 1 123 GLN 123 146 146 GLN GLN A . n A 1 124 VAL 124 147 147 VAL VAL A . n A 1 125 ASP 125 148 148 ASP ASP A . n A 1 126 PHE 126 149 149 PHE PHE A . n A 1 127 SER 127 150 150 SER SER A . n A 1 128 GLU 128 151 151 GLU GLU A . n A 1 129 VAL 129 152 152 VAL VAL A . n A 1 130 GLU 130 153 153 GLU GLU A . n A 1 131 ARG 131 154 154 ARG ARG A . n A 1 132 ALA 132 155 155 ALA ALA A . n A 1 133 ARG 133 156 156 ARG ARG A . n A 1 134 PHE 134 157 157 PHE PHE A . n A 1 135 ILE 135 158 158 ILE ILE A . n A 1 136 ILE 136 159 159 ILE ILE A . n A 1 137 ASN 137 160 160 ASN ASN A . n A 1 138 ASP 138 161 161 ASP ASP A . n A 1 139 TRP 139 162 162 TRP TRP A . n A 1 140 VAL 140 163 163 VAL VAL A . n A 1 141 LYS 141 164 164 LYS LYS A . n A 1 142 THR 142 165 165 THR THR A . n A 1 143 HIS 143 166 166 HIS HIS A . n A 1 144 THR 144 167 167 THR THR A . n A 1 145 LYS 145 168 168 LYS LYS A . n A 1 146 GLY 146 169 169 GLY GLY A . n A 1 147 MET 147 170 170 MET MET A . n A 1 148 ILE 148 171 171 ILE ILE A . n A 1 149 SER 149 172 172 SER SER A . n A 1 150 ASN 150 173 173 ASN ASN A . n A 1 151 LEU 151 174 174 LEU LEU A . n A 1 152 LEU 152 175 175 LEU LEU A . n A 1 153 GLY 153 176 176 GLY GLY A . n A 1 154 LYS 154 177 177 LYS LYS A . n A 1 155 GLY 155 178 178 GLY GLY A . n A 1 156 ALA 156 179 179 ALA ALA A . n A 1 157 VAL 157 180 180 VAL VAL A . n A 1 158 ASP 158 181 181 ASP ASP A . n A 1 159 GLN 159 182 182 GLN GLN A . n A 1 160 LEU 160 183 183 LEU LEU A . n A 1 161 THR 161 184 184 THR THR A . n A 1 162 ARG 162 185 185 ARG ARG A . n A 1 163 LEU 163 186 186 LEU LEU A . n A 1 164 VAL 164 187 187 VAL VAL A . n A 1 165 LEU 165 188 188 LEU LEU A . n A 1 166 VAL 166 189 189 VAL VAL A . n A 1 167 ASN 167 190 190 ASN ASN A . n A 1 168 ALA 168 191 191 ALA ALA A . n A 1 169 LEU 169 192 192 LEU LEU A . n A 1 170 TYR 170 193 193 TYR TYR A . n A 1 171 PHE 171 194 194 PHE PHE A . n A 1 172 ASN 172 195 195 ASN ASN A . n A 1 173 GLY 173 196 196 GLY GLY A . n A 1 174 CYS 174 197 197 CYS CYS A . n A 1 175 TRP 175 198 198 TRP TRP A . n A 1 176 LYS 176 199 199 LYS LYS A . n A 1 177 THR 177 200 200 THR THR A . n A 1 178 PRO 178 201 201 PRO PRO A . n A 1 179 PHE 179 202 202 PHE PHE A . n A 1 180 PRO 180 203 203 PRO PRO A . n A 1 181 ASP 181 204 204 ASP ASP A . n A 1 182 SER 182 205 205 SER SER A . n A 1 183 SER 183 206 206 SER SER A . n A 1 184 THR 184 207 207 THR THR A . n A 1 185 HIS 185 208 208 HIS HIS A . n A 1 186 ARG 186 209 209 ARG ARG A . n A 1 187 ARG 187 210 210 ARG ARG A . n A 1 188 LEU 188 211 211 LEU LEU A . n A 1 189 PHE 189 212 212 PHE PHE A . n A 1 190 HIS 190 213 213 HIS HIS A . n A 1 191 LYS 191 214 214 LYS LYS A . n A 1 192 SER 192 215 215 SER SER A . n A 1 193 ASP 193 216 216 ASP ASP A . n A 1 194 GLY 194 217 217 GLY GLY A . n A 1 195 SER 195 218 218 SER SER A . n A 1 196 THR 196 219 219 THR THR A . n A 1 197 VAL 197 220 220 VAL VAL A . n A 1 198 SER 198 221 221 SER SER A . n A 1 199 VAL 199 222 222 VAL VAL A . n A 1 200 PRO 200 223 223 PRO PRO A . n A 1 201 MET 201 224 224 MET MET A . n A 1 202 MET 202 225 225 MET MET A . n A 1 203 ALA 203 226 226 ALA ALA A . n A 1 204 GLN 204 227 227 GLN GLN A . n A 1 205 THR 205 228 228 THR THR A . n A 1 206 ASN 206 229 229 ASN ASN A . n A 1 207 LYS 207 230 230 LYS LYS A . n A 1 208 PHE 208 231 231 PHE PHE A . n A 1 209 ASN 209 232 232 ASN ASN A . n A 1 210 TYR 210 233 233 TYR TYR A . n A 1 211 THR 211 234 234 THR THR A . n A 1 212 GLU 212 235 235 GLU GLU A . n A 1 213 PHE 213 236 236 PHE PHE A . n A 1 214 THR 214 237 237 THR THR A . n A 1 215 THR 215 238 238 THR THR A . n A 1 216 PRO 216 239 239 PRO PRO A . n A 1 217 ASP 217 240 240 ASP ASP A . n A 1 218 GLY 218 241 241 GLY GLY A . n A 1 219 HIS 219 242 242 HIS HIS A . n A 1 220 TYR 220 243 243 TYR TYR A . n A 1 221 TYR 221 244 244 TYR TYR A . n A 1 222 ASP 222 245 245 ASP ASP A . n A 1 223 ILE 223 246 246 ILE ILE A . n A 1 224 LEU 224 247 247 LEU LEU A . n A 1 225 GLU 225 248 248 GLU GLU A . n A 1 226 LEU 226 249 249 LEU LEU A . n A 1 227 PRO 227 250 250 PRO PRO A . n A 1 228 TYR 228 251 251 TYR TYR A . n A 1 229 HIS 229 252 252 HIS HIS A . n A 1 230 GLY 230 253 253 GLY GLY A . n A 1 231 ASP 231 254 254 ASP ASP A . n A 1 232 THR 232 255 255 THR THR A . n A 1 233 LEU 233 256 256 LEU LEU A . n A 1 234 SER 234 257 257 SER SER A . n A 1 235 MET 235 258 258 MET MET A . n A 1 236 PHE 236 259 259 PHE PHE A . n A 1 237 ILE 237 260 260 ILE ILE A . n A 1 238 ALA 238 261 261 ALA ALA A . n A 1 239 ALA 239 262 262 ALA ALA A . n A 1 240 PRO 240 263 263 PRO PRO A . n A 1 241 TYR 241 264 264 TYR TYR A . n A 1 242 GLU 242 265 265 GLU GLU A . n A 1 243 LYS 243 266 266 LYS LYS A . n A 1 244 GLU 244 267 267 GLU GLU A . n A 1 245 VAL 245 268 268 VAL VAL A . n A 1 246 PRO 246 269 269 PRO PRO A . n A 1 247 LEU 247 270 270 LEU LEU A . n A 1 248 SER 248 271 271 SER SER A . n A 1 249 ALA 249 272 272 ALA ALA A . n A 1 250 LEU 250 273 273 LEU LEU A . n A 1 251 THR 251 274 274 THR THR A . n A 1 252 ASN 252 275 275 ASN ASN A . n A 1 253 ILE 253 276 276 ILE ILE A . n A 1 254 LEU 254 277 277 LEU LEU A . n A 1 255 SER 255 278 278 SER SER A . n A 1 256 ALA 256 279 279 ALA ALA A . n A 1 257 GLN 257 280 280 GLN GLN A . n A 1 258 LEU 258 281 281 LEU LEU A . n A 1 259 ILE 259 282 282 ILE ILE A . n A 1 260 SER 260 283 283 SER SER A . n A 1 261 HIS 261 284 284 HIS HIS A . n A 1 262 TRP 262 285 285 TRP TRP A . n A 1 263 LYS 263 286 286 LYS LYS A . n A 1 264 GLY 264 287 287 GLY GLY A . n A 1 265 ASN 265 288 288 ASN ASN A . n A 1 266 MET 266 289 289 MET MET A . n A 1 267 THR 267 290 290 THR THR A . n A 1 268 ARG 268 291 291 ARG ARG A . n A 1 269 LEU 269 292 292 LEU LEU A . n A 1 270 PRO 270 293 293 PRO PRO A . n A 1 271 ARG 271 294 294 ARG ARG A . n A 1 272 LEU 272 295 295 LEU LEU A . n A 1 273 LEU 273 296 296 LEU LEU A . n A 1 274 VAL 274 297 297 VAL VAL A . n A 1 275 LEU 275 298 298 LEU LEU A . n A 1 276 PRO 276 299 299 PRO PRO A . n A 1 277 LYS 277 300 300 LYS LYS A . n A 1 278 PHE 278 301 301 PHE PHE A . n A 1 279 SER 279 302 302 SER SER A . n A 1 280 LEU 280 303 303 LEU LEU A . n A 1 281 GLU 281 304 304 GLU GLU A . n A 1 282 THR 282 305 305 THR THR A . n A 1 283 GLU 283 306 306 GLU GLU A . n A 1 284 VAL 284 307 307 VAL VAL A . n A 1 285 ASP 285 308 308 ASP ASP A . n A 1 286 LEU 286 309 309 LEU LEU A . n A 1 287 ARG 287 310 310 ARG ARG A . n A 1 288 LYS 288 311 311 LYS LYS A . n A 1 289 PRO 289 312 312 PRO PRO A . n A 1 290 LEU 290 313 313 LEU LEU A . n A 1 291 GLU 291 314 314 GLU GLU A . n A 1 292 ASN 292 315 315 ASN ASN A . n A 1 293 LEU 293 316 316 LEU LEU A . n A 1 294 GLY 294 317 317 GLY GLY A . n A 1 295 MET 295 318 318 MET MET A . n A 1 296 THR 296 319 319 THR THR A . n A 1 297 ASP 297 320 320 ASP ASP A . n A 1 298 MET 298 321 321 MET MET A . n A 1 299 PHE 299 322 322 PHE PHE A . n A 1 300 ARG 300 323 323 ARG ARG A . n A 1 301 GLN 301 324 324 GLN GLN A . n A 1 302 PHE 302 325 325 PHE PHE A . n A 1 303 GLN 303 326 326 GLN GLN A . n A 1 304 ALA 304 327 327 ALA ALA A . n A 1 305 ASP 305 328 328 ASP ASP A . n A 1 306 PHE 306 329 329 PHE PHE A . n A 1 307 THR 307 330 330 THR THR A . n A 1 308 SER 308 331 331 SER SER A . n A 1 309 LEU 309 332 332 LEU LEU A . n A 1 310 SER 310 333 333 SER SER A . n A 1 311 ASP 311 334 334 ASP ASP A . n A 1 312 GLN 312 335 335 GLN GLN A . n A 1 313 GLU 313 336 336 GLU GLU A . n A 1 314 PRO 314 337 337 PRO PRO A . n A 1 315 LEU 315 338 338 LEU LEU A . n A 1 316 HIS 316 339 339 HIS HIS A . n A 1 317 VAL 317 340 340 VAL VAL A . n A 1 318 ALA 318 341 341 ALA ALA A . n A 1 319 GLN 319 342 342 GLN GLN A . n A 1 320 ALA 320 343 343 ALA ALA A . n A 1 321 LEU 321 344 344 LEU LEU A . n A 1 322 GLN 322 345 345 GLN GLN A . n A 1 323 LYS 323 346 346 LYS LYS A . n A 1 324 VAL 324 347 347 VAL VAL A . n A 1 325 LYS 325 348 348 LYS LYS A . n A 1 326 ILE 326 349 349 ILE ILE A . n A 1 327 GLU 327 350 350 GLU GLU A . n A 1 328 VAL 328 351 351 VAL VAL A . n A 1 329 ASN 329 352 352 ASN ASN A . n A 1 330 GLU 330 353 353 GLU GLU A . n A 1 331 SER 331 354 354 SER SER A . n A 1 332 CYS 332 355 355 CYS CYS A . n A 1 333 THR 333 356 356 THR THR A . n A 1 334 VAL 334 357 357 VAL VAL A . n A 1 335 ALA 335 358 358 ALA ALA A . n A 1 336 SER 336 359 359 SER SER A . n A 1 337 SER 337 360 360 SER SER A . n A 1 338 SER 338 361 361 SER SER A . n A 1 339 THR 339 362 362 THR THR A . n A 1 340 ALA 340 363 363 ALA ALA A . n A 1 341 VAL 341 364 364 VAL VAL A . n A 1 342 ILE 342 365 365 ILE ILE A . n A 1 343 VAL 343 366 366 VAL VAL A . n A 1 344 SER 344 367 367 SER SER A . n A 1 345 ALA 345 368 368 ALA ALA A . n A 1 346 ARG 346 369 369 ARG ARG A . n A 1 347 MET 347 370 370 MET MET A . n A 1 348 ALA 348 371 371 ALA ALA A . n A 1 349 PRO 349 372 372 PRO PRO A . n A 1 350 GLU 350 373 373 GLU GLU A . n A 1 351 GLU 351 374 374 GLU GLU A . n A 1 352 ILE 352 375 375 ILE ILE A . n A 1 353 ILE 353 376 376 ILE ILE A . n A 1 354 MET 354 377 377 MET MET A . n A 1 355 ASP 355 378 378 ASP ASP A . n A 1 356 ARG 356 379 379 ARG ARG A . n A 1 357 PRO 357 380 380 PRO PRO A . n A 1 358 PHE 358 381 381 PHE PHE A . n A 1 359 LEU 359 382 382 LEU LEU A . n A 1 360 PHE 360 383 383 PHE PHE A . n A 1 361 VAL 361 384 384 VAL VAL A . n A 1 362 VAL 362 385 385 VAL VAL A . n A 1 363 ARG 363 386 386 ARG ARG A . n A 1 364 HIS 364 387 387 HIS HIS A . n A 1 365 ASN 365 388 388 ASN ASN A . n A 1 366 PRO 366 389 389 PRO PRO A . n A 1 367 THR 367 390 390 THR THR A . n A 1 368 GLY 368 391 391 GLY GLY A . n A 1 369 THR 369 392 392 THR THR A . n A 1 370 VAL 370 393 393 VAL VAL A . n A 1 371 LEU 371 394 394 LEU LEU A . n A 1 372 PHE 372 395 395 PHE PHE A . n A 1 373 MET 373 396 396 MET MET A . n A 1 374 GLY 374 397 397 GLY GLY A . n A 1 375 GLN 375 398 398 GLN GLN A . n A 1 376 VAL 376 399 399 VAL VAL A . n A 1 377 MET 377 400 400 MET MET A . n A 1 378 GLU 378 401 401 GLU GLU A . n A 1 379 PRO 379 402 402 PRO PRO A . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NDG 403 n B 2 NAG 2 B NAG 2 A NAG 405 n B 2 BMA 3 B BMA 3 A BMA 406 n B 2 BMA 4 B BMA 4 A BMA 407 n B 2 FUC 5 B FUC 5 A FUC 404 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG 1 408 408 NAG NAG A . D 4 HOH 1 501 501 HOH HOH A . D 4 HOH 2 502 502 HOH HOH A . D 4 HOH 3 503 503 HOH HOH A . D 4 HOH 4 504 504 HOH HOH A . D 4 HOH 5 505 505 HOH HOH A . D 4 HOH 6 506 506 HOH HOH A . D 4 HOH 7 507 507 HOH HOH A . D 4 HOH 8 508 508 HOH HOH A . D 4 HOH 9 509 509 HOH HOH A . D 4 HOH 10 510 510 HOH HOH A . D 4 HOH 11 511 511 HOH HOH A . D 4 HOH 12 512 512 HOH HOH A . D 4 HOH 13 513 513 HOH HOH A . D 4 HOH 14 514 514 HOH HOH A . D 4 HOH 15 515 515 HOH HOH A . D 4 HOH 16 516 516 HOH HOH A . D 4 HOH 17 517 517 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.6.0093 ? 3 DENZO 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # _cell.entry_id 3R4L _cell.length_a 72.007 _cell.length_b 72.007 _cell.length_c 194.481 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3R4L _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3R4L _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.40 _exptl_crystal.density_percent_sol 64 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.025M NACL, 27% TERT-BUTANOL, 0.050M TRIS-HCL, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2010-08-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Asymmetric curved crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 5.0.3' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 5.0.3 _diffrn_source.pdbx_wavelength 1.00 _diffrn_source.pdbx_wavelength_list 1.00 # _reflns.entry_id 3R4L _reflns.observed_criterion_sigma_I 1.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 33.003 _reflns.d_resolution_high 2.699 _reflns.number_obs 13852 _reflns.number_all ? _reflns.percent_possible_obs 82.4 _reflns.pdbx_Rmerge_I_obs 0.064 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 18.1 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.699 _reflns_shell.d_res_low 2.80 _reflns_shell.percent_possible_all 98.7 _reflns_shell.Rmerge_I_obs 0.27 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.5 _reflns_shell.pdbx_redundancy 4.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3R4L _refine.ls_number_reflns_obs 13038 _refine.ls_number_reflns_all 13852 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 33.0 _refine.ls_d_res_high 2.70 _refine.ls_percent_reflns_obs 81.8 _refine.ls_R_factor_obs 0.212 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.209 _refine.ls_R_factor_R_free 0.282 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.200 _refine.ls_number_reflns_R_free 709 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.954 _refine.correlation_coeff_Fo_to_Fc_free 0.925 _refine.B_iso_mean 68.8 _refine.aniso_B[1][1] 3.73000 _refine.aniso_B[2][2] 3.73000 _refine.aniso_B[3][3] -5.60000 _refine.aniso_B[1][2] 1.87000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] -0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 9PAI' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 1.367 _refine.pdbx_overall_ESU_R_Free 0.408 _refine.overall_SU_ML 0.310 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 15.309 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2995 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 74 _refine_hist.number_atoms_solvent 17 _refine_hist.number_atoms_total 3086 _refine_hist.d_res_high 2.70 _refine_hist.d_res_low 33.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.022 ? 3149 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.860 1.982 ? 4281 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 8.148 5.000 ? 376 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.098 23.841 ? 138 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 21.882 15.000 ? 526 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 23.120 15.000 ? 18 'X-RAY DIFFRACTION' ? r_chiral_restr 0.126 0.200 ? 496 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.021 ? 2343 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.70 _refine_ls_shell.d_res_low 2.77 _refine_ls_shell.number_reflns_R_work 1014 _refine_ls_shell.R_factor_R_work 0.303 _refine_ls_shell.percent_reflns_obs 94.42 _refine_ls_shell.R_factor_R_free 0.367 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 53 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _database_PDB_matrix.entry_id 3R4L _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3R4L _struct.title 'Human very long half life Plasminogen Activator Inhibitor type-1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3R4L _struct_keywords.pdbx_keywords 'BLOOD CLOTTING' _struct_keywords.text 'serine protease inhibitor, PAI-1, very long half life, plasminogen activator inhibitor type 1, carbohydrate, blood clotting' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PAI1_HUMAN _struct_ref.pdbx_db_accession P05121 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VHHPPSYVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYK ELMGPWNKDEISTTDAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISNLLGKGAVDQL TRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFTTPDGHYYDILELPYHGDTLSMFIAAP YEKEVPLSALTNILSAQLISHWKGNMTRLPRLLVLPKFSLETEVDLRKPLENLGMTDMFRQFQADFTSLSDQEPLHVAQA LQKVKIEVNESGTVASSSTAVIVSARMAPEEIIMDRPFLFVVRHNPTGTVLFMGQVMEP ; _struct_ref.pdbx_align_begin 24 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3R4L _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 379 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P05121 _struct_ref_seq.db_align_beg 24 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 402 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 24 _struct_ref_seq.pdbx_auth_seq_align_end 402 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3R4L CYS A 174 ? UNP P05121 GLN 197 'engineered mutation' 197 1 1 3R4L CYS A 332 ? UNP P05121 GLY 355 'engineered mutation' 355 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 6 ? ALA A 26 ? SER A 29 ALA A 49 1 ? 21 HELX_P HELX_P2 2 SER A 35 ? GLN A 47 ? SER A 58 GLN A 70 1 ? 13 HELX_P HELX_P3 3 LEU A 48 ? THR A 50 ? LEU A 71 THR A 73 5 ? 3 HELX_P HELX_P4 4 GLY A 51 ? GLY A 63 ? GLY A 74 GLY A 86 1 ? 13 HELX_P HELX_P5 5 GLY A 70 ? MET A 83 ? GLY A 93 MET A 106 1 ? 14 HELX_P HELX_P6 6 GLY A 108 ? ARG A 118 ? GLY A 131 ARG A 141 1 ? 11 HELX_P HELX_P7 7 GLU A 128 ? THR A 144 ? GLU A 151 THR A 167 1 ? 17 HELX_P HELX_P8 8 HIS A 229 ? ASP A 231 ? HIS A 252 ASP A 254 5 ? 3 HELX_P HELX_P9 9 LEU A 247 ? ASN A 252 ? LEU A 270 ASN A 275 1 ? 6 HELX_P HELX_P10 10 SER A 255 ? ASN A 265 ? SER A 278 ASN A 288 1 ? 11 HELX_P HELX_P11 11 LEU A 286 ? LEU A 293 ? LEU A 309 LEU A 316 1 ? 8 HELX_P HELX_P12 12 THR A 296 ? ARG A 300 ? THR A 319 ARG A 323 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 174 SG ? ? ? 1_555 A CYS 332 SG ? ? A CYS 197 A CYS 355 1_555 ? ? ? ? ? ? ? 2.022 ? ? covale1 covale one ? A ASN 209 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 232 A NAG 408 1_555 ? ? ? ? ? ? ? 1.440 ? N-Glycosylation covale2 covale one ? A ASN 265 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 288 B NAG 1 1_555 ? ? ? ? ? ? ? 1.445 ? N-Glycosylation covale3 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.439 ? ? covale4 covale both ? B NAG . O6 ? ? ? 1_555 B FUC . C1 ? ? B NAG 1 B FUC 5 1_555 ? ? ? ? ? ? ? 1.447 ? ? covale5 covale both ? B NAG . O4 ? ? ? 1_555 B BMA . C1 ? ? B NAG 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.437 ? ? covale6 covale both ? B BMA . O6 ? ? ? 1_555 B BMA . C1 ? ? B BMA 3 B BMA 4 1_555 ? ? ? ? ? ? ? 1.468 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG B . ? ASN A 265 ? NAG B 1 ? 1_555 ASN A 288 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 NAG C . ? ASN A 209 ? NAG A 408 ? 1_555 ASN A 232 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 3 CYS A 174 ? CYS A 332 ? CYS A 197 ? 1_555 CYS A 355 ? 1_555 SG SG . . . None 'Disulfide bridge' # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id THR _struct_mon_prot_cis.label_seq_id 339 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id THR _struct_mon_prot_cis.auth_seq_id 362 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 ALA _struct_mon_prot_cis.pdbx_label_seq_id_2 340 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 ALA _struct_mon_prot_cis.pdbx_auth_seq_id_2 363 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -22.62 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 8 ? C ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel B 7 8 ? parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? parallel C 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 32 ? PHE A 34 ? VAL A 55 PHE A 57 A 2 THR A 369 ? VAL A 376 ? THR A 392 VAL A 399 A 3 PHE A 358 ? HIS A 364 ? PHE A 381 HIS A 387 A 4 LEU A 233 ? PRO A 240 ? LEU A 256 PRO A 263 A 5 TYR A 220 ? PRO A 227 ? TYR A 243 PRO A 250 A 6 THR A 196 ? THR A 214 ? THR A 219 THR A 237 A 7 HIS A 185 ? HIS A 190 ? HIS A 208 HIS A 213 B 1 VAL A 32 ? PHE A 34 ? VAL A 55 PHE A 57 B 2 THR A 369 ? VAL A 376 ? THR A 392 VAL A 399 B 3 PHE A 358 ? HIS A 364 ? PHE A 381 HIS A 387 B 4 LEU A 233 ? PRO A 240 ? LEU A 256 PRO A 263 B 5 TYR A 220 ? PRO A 227 ? TYR A 243 PRO A 250 B 6 THR A 196 ? THR A 214 ? THR A 219 THR A 237 B 7 THR A 267 ? PRO A 276 ? THR A 290 PRO A 299 B 8 GLU A 351 ? ILE A 353 ? GLU A 374 ILE A 376 C 1 LYS A 122 ? VAL A 124 ? LYS A 145 VAL A 147 C 2 ILE A 91 ? GLN A 100 ? ILE A 114 GLN A 123 C 3 LEU A 163 ? PHE A 171 ? LEU A 186 PHE A 194 C 4 GLN A 319 ? VAL A 328 ? GLN A 342 VAL A 351 C 5 PHE A 278 ? ASP A 285 ? PHE A 301 ASP A 308 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 34 ? N PHE A 57 O MET A 373 ? O MET A 396 A 2 3 O VAL A 376 ? O VAL A 399 N PHE A 358 ? N PHE A 381 A 3 4 O VAL A 361 ? O VAL A 384 N PHE A 236 ? N PHE A 259 A 4 5 O ILE A 237 ? O ILE A 260 N LEU A 224 ? N LEU A 247 A 5 6 O ILE A 223 ? O ILE A 246 N THR A 211 ? N THR A 234 A 6 7 O VAL A 197 ? O VAL A 220 N PHE A 189 ? N PHE A 212 B 1 2 N PHE A 34 ? N PHE A 57 O MET A 373 ? O MET A 396 B 2 3 O VAL A 376 ? O VAL A 399 N PHE A 358 ? N PHE A 381 B 3 4 O VAL A 361 ? O VAL A 384 N PHE A 236 ? N PHE A 259 B 4 5 O ILE A 237 ? O ILE A 260 N LEU A 224 ? N LEU A 247 B 5 6 O ILE A 223 ? O ILE A 246 N THR A 211 ? N THR A 234 B 6 7 N MET A 202 ? N MET A 225 O LEU A 275 ? O LEU A 298 B 7 8 N LEU A 272 ? N LEU A 295 O ILE A 352 ? O ILE A 375 C 1 2 O LYS A 122 ? O LYS A 145 N VAL A 99 ? N VAL A 122 C 2 3 N PHE A 98 ? N PHE A 121 O VAL A 164 ? O VAL A 187 C 3 4 N LEU A 165 ? N LEU A 188 O LEU A 321 ? O LEU A 344 C 4 5 O GLN A 322 ? O GLN A 345 N VAL A 284 ? N VAL A 307 # _pdbx_entry_details.entry_id 3R4L _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 51 ? ? -28.25 126.87 2 1 ASP A 91 ? ? -58.60 170.30 3 1 LYS A 127 ? ? -56.07 109.89 4 1 MET A 133 ? ? -39.83 -70.92 5 1 ARG A 141 ? ? 51.43 -179.81 6 1 SER A 142 ? ? 54.50 171.71 7 1 VAL A 152 ? ? 30.10 -125.17 8 1 SER A 172 ? ? -88.18 -94.23 9 1 ASN A 173 ? ? -85.61 40.18 10 1 LYS A 177 ? ? -32.42 -35.20 11 1 VAL A 180 ? ? 121.21 120.41 12 1 GLN A 182 ? ? -37.69 -31.12 13 1 SER A 206 ? ? -97.75 32.25 14 1 LYS A 214 ? ? -55.08 171.16 15 1 ASP A 216 ? ? -67.94 12.57 16 1 SER A 218 ? ? -58.43 -176.25 17 1 GLN A 326 ? ? -154.09 -39.84 18 1 GLU A 336 ? ? -15.79 -84.54 19 1 ASN A 352 ? ? -170.27 82.32 20 1 GLU A 353 ? ? 80.06 -55.58 21 1 VAL A 357 ? ? -57.58 70.33 22 1 ALA A 358 ? ? 48.18 -8.79 23 1 VAL A 364 ? ? -37.51 138.67 24 1 VAL A 366 ? ? -101.79 50.43 25 1 ALA A 368 ? ? -79.58 -125.57 26 1 ALA A 371 ? ? -1.55 105.86 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 GLU _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 336 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 PRO _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 337 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -142.10 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id C1 _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id B _pdbx_validate_chiral.auth_comp_id NAG _pdbx_validate_chiral.auth_seq_id 1 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 209 A ASN 232 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 265 A ASN 288 ? ASN 'GLYCOSYLATION SITE' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A VAL 24 ? A VAL 1 2 1 Y 1 A HIS 25 ? A HIS 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 CYS N N N N 98 CYS CA C N R 99 CYS C C N N 100 CYS O O N N 101 CYS CB C N N 102 CYS SG S N N 103 CYS OXT O N N 104 CYS H H N N 105 CYS H2 H N N 106 CYS HA H N N 107 CYS HB2 H N N 108 CYS HB3 H N N 109 CYS HG H N N 110 CYS HXT H N N 111 FUC C1 C N R 112 FUC C2 C N S 113 FUC C3 C N R 114 FUC C4 C N S 115 FUC C5 C N S 116 FUC C6 C N N 117 FUC O1 O N N 118 FUC O2 O N N 119 FUC O3 O N N 120 FUC O4 O N N 121 FUC O5 O N N 122 FUC H1 H N N 123 FUC H2 H N N 124 FUC H3 H N N 125 FUC H4 H N N 126 FUC H5 H N N 127 FUC H61 H N N 128 FUC H62 H N N 129 FUC H63 H N N 130 FUC HO1 H N N 131 FUC HO2 H N N 132 FUC HO3 H N N 133 FUC HO4 H N N 134 GLN N N N N 135 GLN CA C N S 136 GLN C C N N 137 GLN O O N N 138 GLN CB C N N 139 GLN CG C N N 140 GLN CD C N N 141 GLN OE1 O N N 142 GLN NE2 N N N 143 GLN OXT O N N 144 GLN H H N N 145 GLN H2 H N N 146 GLN HA H N N 147 GLN HB2 H N N 148 GLN HB3 H N N 149 GLN HG2 H N N 150 GLN HG3 H N N 151 GLN HE21 H N N 152 GLN HE22 H N N 153 GLN HXT H N N 154 GLU N N N N 155 GLU CA C N S 156 GLU C C N N 157 GLU O O N N 158 GLU CB C N N 159 GLU CG C N N 160 GLU CD C N N 161 GLU OE1 O N N 162 GLU OE2 O N N 163 GLU OXT O N N 164 GLU H H N N 165 GLU H2 H N N 166 GLU HA H N N 167 GLU HB2 H N N 168 GLU HB3 H N N 169 GLU HG2 H N N 170 GLU HG3 H N N 171 GLU HE2 H N N 172 GLU HXT H N N 173 GLY N N N N 174 GLY CA C N N 175 GLY C C N N 176 GLY O O N N 177 GLY OXT O N N 178 GLY H H N N 179 GLY H2 H N N 180 GLY HA2 H N N 181 GLY HA3 H N N 182 GLY HXT H N N 183 HIS N N N N 184 HIS CA C N S 185 HIS C C N N 186 HIS O O N N 187 HIS CB C N N 188 HIS CG C Y N 189 HIS ND1 N Y N 190 HIS CD2 C Y N 191 HIS CE1 C Y N 192 HIS NE2 N Y N 193 HIS OXT O N N 194 HIS H H N N 195 HIS H2 H N N 196 HIS HA H N N 197 HIS HB2 H N N 198 HIS HB3 H N N 199 HIS HD1 H N N 200 HIS HD2 H N N 201 HIS HE1 H N N 202 HIS HE2 H N N 203 HIS HXT H N N 204 HOH O O N N 205 HOH H1 H N N 206 HOH H2 H N N 207 ILE N N N N 208 ILE CA C N S 209 ILE C C N N 210 ILE O O N N 211 ILE CB C N S 212 ILE CG1 C N N 213 ILE CG2 C N N 214 ILE CD1 C N N 215 ILE OXT O N N 216 ILE H H N N 217 ILE H2 H N N 218 ILE HA H N N 219 ILE HB H N N 220 ILE HG12 H N N 221 ILE HG13 H N N 222 ILE HG21 H N N 223 ILE HG22 H N N 224 ILE HG23 H N N 225 ILE HD11 H N N 226 ILE HD12 H N N 227 ILE HD13 H N N 228 ILE HXT H N N 229 LEU N N N N 230 LEU CA C N S 231 LEU C C N N 232 LEU O O N N 233 LEU CB C N N 234 LEU CG C N N 235 LEU CD1 C N N 236 LEU CD2 C N N 237 LEU OXT O N N 238 LEU H H N N 239 LEU H2 H N N 240 LEU HA H N N 241 LEU HB2 H N N 242 LEU HB3 H N N 243 LEU HG H N N 244 LEU HD11 H N N 245 LEU HD12 H N N 246 LEU HD13 H N N 247 LEU HD21 H N N 248 LEU HD22 H N N 249 LEU HD23 H N N 250 LEU HXT H N N 251 LYS N N N N 252 LYS CA C N S 253 LYS C C N N 254 LYS O O N N 255 LYS CB C N N 256 LYS CG C N N 257 LYS CD C N N 258 LYS CE C N N 259 LYS NZ N N N 260 LYS OXT O N N 261 LYS H H N N 262 LYS H2 H N N 263 LYS HA H N N 264 LYS HB2 H N N 265 LYS HB3 H N N 266 LYS HG2 H N N 267 LYS HG3 H N N 268 LYS HD2 H N N 269 LYS HD3 H N N 270 LYS HE2 H N N 271 LYS HE3 H N N 272 LYS HZ1 H N N 273 LYS HZ2 H N N 274 LYS HZ3 H N N 275 LYS HXT H N N 276 MET N N N N 277 MET CA C N S 278 MET C C N N 279 MET O O N N 280 MET CB C N N 281 MET CG C N N 282 MET SD S N N 283 MET CE C N N 284 MET OXT O N N 285 MET H H N N 286 MET H2 H N N 287 MET HA H N N 288 MET HB2 H N N 289 MET HB3 H N N 290 MET HG2 H N N 291 MET HG3 H N N 292 MET HE1 H N N 293 MET HE2 H N N 294 MET HE3 H N N 295 MET HXT H N N 296 NAG C1 C N R 297 NAG C2 C N R 298 NAG C3 C N R 299 NAG C4 C N S 300 NAG C5 C N R 301 NAG C6 C N N 302 NAG C7 C N N 303 NAG C8 C N N 304 NAG N2 N N N 305 NAG O1 O N N 306 NAG O3 O N N 307 NAG O4 O N N 308 NAG O5 O N N 309 NAG O6 O N N 310 NAG O7 O N N 311 NAG H1 H N N 312 NAG H2 H N N 313 NAG H3 H N N 314 NAG H4 H N N 315 NAG H5 H N N 316 NAG H61 H N N 317 NAG H62 H N N 318 NAG H81 H N N 319 NAG H82 H N N 320 NAG H83 H N N 321 NAG HN2 H N N 322 NAG HO1 H N N 323 NAG HO3 H N N 324 NAG HO4 H N N 325 NAG HO6 H N N 326 PHE N N N N 327 PHE CA C N S 328 PHE C C N N 329 PHE O O N N 330 PHE CB C N N 331 PHE CG C Y N 332 PHE CD1 C Y N 333 PHE CD2 C Y N 334 PHE CE1 C Y N 335 PHE CE2 C Y N 336 PHE CZ C Y N 337 PHE OXT O N N 338 PHE H H N N 339 PHE H2 H N N 340 PHE HA H N N 341 PHE HB2 H N N 342 PHE HB3 H N N 343 PHE HD1 H N N 344 PHE HD2 H N N 345 PHE HE1 H N N 346 PHE HE2 H N N 347 PHE HZ H N N 348 PHE HXT H N N 349 PRO N N N N 350 PRO CA C N S 351 PRO C C N N 352 PRO O O N N 353 PRO CB C N N 354 PRO CG C N N 355 PRO CD C N N 356 PRO OXT O N N 357 PRO H H N N 358 PRO HA H N N 359 PRO HB2 H N N 360 PRO HB3 H N N 361 PRO HG2 H N N 362 PRO HG3 H N N 363 PRO HD2 H N N 364 PRO HD3 H N N 365 PRO HXT H N N 366 SER N N N N 367 SER CA C N S 368 SER C C N N 369 SER O O N N 370 SER CB C N N 371 SER OG O N N 372 SER OXT O N N 373 SER H H N N 374 SER H2 H N N 375 SER HA H N N 376 SER HB2 H N N 377 SER HB3 H N N 378 SER HG H N N 379 SER HXT H N N 380 THR N N N N 381 THR CA C N S 382 THR C C N N 383 THR O O N N 384 THR CB C N R 385 THR OG1 O N N 386 THR CG2 C N N 387 THR OXT O N N 388 THR H H N N 389 THR H2 H N N 390 THR HA H N N 391 THR HB H N N 392 THR HG1 H N N 393 THR HG21 H N N 394 THR HG22 H N N 395 THR HG23 H N N 396 THR HXT H N N 397 TRP N N N N 398 TRP CA C N S 399 TRP C C N N 400 TRP O O N N 401 TRP CB C N N 402 TRP CG C Y N 403 TRP CD1 C Y N 404 TRP CD2 C Y N 405 TRP NE1 N Y N 406 TRP CE2 C Y N 407 TRP CE3 C Y N 408 TRP CZ2 C Y N 409 TRP CZ3 C Y N 410 TRP CH2 C Y N 411 TRP OXT O N N 412 TRP H H N N 413 TRP H2 H N N 414 TRP HA H N N 415 TRP HB2 H N N 416 TRP HB3 H N N 417 TRP HD1 H N N 418 TRP HE1 H N N 419 TRP HE3 H N N 420 TRP HZ2 H N N 421 TRP HZ3 H N N 422 TRP HH2 H N N 423 TRP HXT H N N 424 TYR N N N N 425 TYR CA C N S 426 TYR C C N N 427 TYR O O N N 428 TYR CB C N N 429 TYR CG C Y N 430 TYR CD1 C Y N 431 TYR CD2 C Y N 432 TYR CE1 C Y N 433 TYR CE2 C Y N 434 TYR CZ C Y N 435 TYR OH O N N 436 TYR OXT O N N 437 TYR H H N N 438 TYR H2 H N N 439 TYR HA H N N 440 TYR HB2 H N N 441 TYR HB3 H N N 442 TYR HD1 H N N 443 TYR HD2 H N N 444 TYR HE1 H N N 445 TYR HE2 H N N 446 TYR HH H N N 447 TYR HXT H N N 448 VAL N N N N 449 VAL CA C N S 450 VAL C C N N 451 VAL O O N N 452 VAL CB C N N 453 VAL CG1 C N N 454 VAL CG2 C N N 455 VAL OXT O N N 456 VAL H H N N 457 VAL H2 H N N 458 VAL HA H N N 459 VAL HB H N N 460 VAL HG11 H N N 461 VAL HG12 H N N 462 VAL HG13 H N N 463 VAL HG21 H N N 464 VAL HG22 H N N 465 VAL HG23 H N N 466 VAL HXT H N N 467 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 FUC C1 C2 sing N N 107 FUC C1 O1 sing N N 108 FUC C1 O5 sing N N 109 FUC C1 H1 sing N N 110 FUC C2 C3 sing N N 111 FUC C2 O2 sing N N 112 FUC C2 H2 sing N N 113 FUC C3 C4 sing N N 114 FUC C3 O3 sing N N 115 FUC C3 H3 sing N N 116 FUC C4 C5 sing N N 117 FUC C4 O4 sing N N 118 FUC C4 H4 sing N N 119 FUC C5 C6 sing N N 120 FUC C5 O5 sing N N 121 FUC C5 H5 sing N N 122 FUC C6 H61 sing N N 123 FUC C6 H62 sing N N 124 FUC C6 H63 sing N N 125 FUC O1 HO1 sing N N 126 FUC O2 HO2 sing N N 127 FUC O3 HO3 sing N N 128 FUC O4 HO4 sing N N 129 GLN N CA sing N N 130 GLN N H sing N N 131 GLN N H2 sing N N 132 GLN CA C sing N N 133 GLN CA CB sing N N 134 GLN CA HA sing N N 135 GLN C O doub N N 136 GLN C OXT sing N N 137 GLN CB CG sing N N 138 GLN CB HB2 sing N N 139 GLN CB HB3 sing N N 140 GLN CG CD sing N N 141 GLN CG HG2 sing N N 142 GLN CG HG3 sing N N 143 GLN CD OE1 doub N N 144 GLN CD NE2 sing N N 145 GLN NE2 HE21 sing N N 146 GLN NE2 HE22 sing N N 147 GLN OXT HXT sing N N 148 GLU N CA sing N N 149 GLU N H sing N N 150 GLU N H2 sing N N 151 GLU CA C sing N N 152 GLU CA CB sing N N 153 GLU CA HA sing N N 154 GLU C O doub N N 155 GLU C OXT sing N N 156 GLU CB CG sing N N 157 GLU CB HB2 sing N N 158 GLU CB HB3 sing N N 159 GLU CG CD sing N N 160 GLU CG HG2 sing N N 161 GLU CG HG3 sing N N 162 GLU CD OE1 doub N N 163 GLU CD OE2 sing N N 164 GLU OE2 HE2 sing N N 165 GLU OXT HXT sing N N 166 GLY N CA sing N N 167 GLY N H sing N N 168 GLY N H2 sing N N 169 GLY CA C sing N N 170 GLY CA HA2 sing N N 171 GLY CA HA3 sing N N 172 GLY C O doub N N 173 GLY C OXT sing N N 174 GLY OXT HXT sing N N 175 HIS N CA sing N N 176 HIS N H sing N N 177 HIS N H2 sing N N 178 HIS CA C sing N N 179 HIS CA CB sing N N 180 HIS CA HA sing N N 181 HIS C O doub N N 182 HIS C OXT sing N N 183 HIS CB CG sing N N 184 HIS CB HB2 sing N N 185 HIS CB HB3 sing N N 186 HIS CG ND1 sing Y N 187 HIS CG CD2 doub Y N 188 HIS ND1 CE1 doub Y N 189 HIS ND1 HD1 sing N N 190 HIS CD2 NE2 sing Y N 191 HIS CD2 HD2 sing N N 192 HIS CE1 NE2 sing Y N 193 HIS CE1 HE1 sing N N 194 HIS NE2 HE2 sing N N 195 HIS OXT HXT sing N N 196 HOH O H1 sing N N 197 HOH O H2 sing N N 198 ILE N CA sing N N 199 ILE N H sing N N 200 ILE N H2 sing N N 201 ILE CA C sing N N 202 ILE CA CB sing N N 203 ILE CA HA sing N N 204 ILE C O doub N N 205 ILE C OXT sing N N 206 ILE CB CG1 sing N N 207 ILE CB CG2 sing N N 208 ILE CB HB sing N N 209 ILE CG1 CD1 sing N N 210 ILE CG1 HG12 sing N N 211 ILE CG1 HG13 sing N N 212 ILE CG2 HG21 sing N N 213 ILE CG2 HG22 sing N N 214 ILE CG2 HG23 sing N N 215 ILE CD1 HD11 sing N N 216 ILE CD1 HD12 sing N N 217 ILE CD1 HD13 sing N N 218 ILE OXT HXT sing N N 219 LEU N CA sing N N 220 LEU N H sing N N 221 LEU N H2 sing N N 222 LEU CA C sing N N 223 LEU CA CB sing N N 224 LEU CA HA sing N N 225 LEU C O doub N N 226 LEU C OXT sing N N 227 LEU CB CG sing N N 228 LEU CB HB2 sing N N 229 LEU CB HB3 sing N N 230 LEU CG CD1 sing N N 231 LEU CG CD2 sing N N 232 LEU CG HG sing N N 233 LEU CD1 HD11 sing N N 234 LEU CD1 HD12 sing N N 235 LEU CD1 HD13 sing N N 236 LEU CD2 HD21 sing N N 237 LEU CD2 HD22 sing N N 238 LEU CD2 HD23 sing N N 239 LEU OXT HXT sing N N 240 LYS N CA sing N N 241 LYS N H sing N N 242 LYS N H2 sing N N 243 LYS CA C sing N N 244 LYS CA CB sing N N 245 LYS CA HA sing N N 246 LYS C O doub N N 247 LYS C OXT sing N N 248 LYS CB CG sing N N 249 LYS CB HB2 sing N N 250 LYS CB HB3 sing N N 251 LYS CG CD sing N N 252 LYS CG HG2 sing N N 253 LYS CG HG3 sing N N 254 LYS CD CE sing N N 255 LYS CD HD2 sing N N 256 LYS CD HD3 sing N N 257 LYS CE NZ sing N N 258 LYS CE HE2 sing N N 259 LYS CE HE3 sing N N 260 LYS NZ HZ1 sing N N 261 LYS NZ HZ2 sing N N 262 LYS NZ HZ3 sing N N 263 LYS OXT HXT sing N N 264 MET N CA sing N N 265 MET N H sing N N 266 MET N H2 sing N N 267 MET CA C sing N N 268 MET CA CB sing N N 269 MET CA HA sing N N 270 MET C O doub N N 271 MET C OXT sing N N 272 MET CB CG sing N N 273 MET CB HB2 sing N N 274 MET CB HB3 sing N N 275 MET CG SD sing N N 276 MET CG HG2 sing N N 277 MET CG HG3 sing N N 278 MET SD CE sing N N 279 MET CE HE1 sing N N 280 MET CE HE2 sing N N 281 MET CE HE3 sing N N 282 MET OXT HXT sing N N 283 NAG C1 C2 sing N N 284 NAG C1 O1 sing N N 285 NAG C1 O5 sing N N 286 NAG C1 H1 sing N N 287 NAG C2 C3 sing N N 288 NAG C2 N2 sing N N 289 NAG C2 H2 sing N N 290 NAG C3 C4 sing N N 291 NAG C3 O3 sing N N 292 NAG C3 H3 sing N N 293 NAG C4 C5 sing N N 294 NAG C4 O4 sing N N 295 NAG C4 H4 sing N N 296 NAG C5 C6 sing N N 297 NAG C5 O5 sing N N 298 NAG C5 H5 sing N N 299 NAG C6 O6 sing N N 300 NAG C6 H61 sing N N 301 NAG C6 H62 sing N N 302 NAG C7 C8 sing N N 303 NAG C7 N2 sing N N 304 NAG C7 O7 doub N N 305 NAG C8 H81 sing N N 306 NAG C8 H82 sing N N 307 NAG C8 H83 sing N N 308 NAG N2 HN2 sing N N 309 NAG O1 HO1 sing N N 310 NAG O3 HO3 sing N N 311 NAG O4 HO4 sing N N 312 NAG O6 HO6 sing N N 313 PHE N CA sing N N 314 PHE N H sing N N 315 PHE N H2 sing N N 316 PHE CA C sing N N 317 PHE CA CB sing N N 318 PHE CA HA sing N N 319 PHE C O doub N N 320 PHE C OXT sing N N 321 PHE CB CG sing N N 322 PHE CB HB2 sing N N 323 PHE CB HB3 sing N N 324 PHE CG CD1 doub Y N 325 PHE CG CD2 sing Y N 326 PHE CD1 CE1 sing Y N 327 PHE CD1 HD1 sing N N 328 PHE CD2 CE2 doub Y N 329 PHE CD2 HD2 sing N N 330 PHE CE1 CZ doub Y N 331 PHE CE1 HE1 sing N N 332 PHE CE2 CZ sing Y N 333 PHE CE2 HE2 sing N N 334 PHE CZ HZ sing N N 335 PHE OXT HXT sing N N 336 PRO N CA sing N N 337 PRO N CD sing N N 338 PRO N H sing N N 339 PRO CA C sing N N 340 PRO CA CB sing N N 341 PRO CA HA sing N N 342 PRO C O doub N N 343 PRO C OXT sing N N 344 PRO CB CG sing N N 345 PRO CB HB2 sing N N 346 PRO CB HB3 sing N N 347 PRO CG CD sing N N 348 PRO CG HG2 sing N N 349 PRO CG HG3 sing N N 350 PRO CD HD2 sing N N 351 PRO CD HD3 sing N N 352 PRO OXT HXT sing N N 353 SER N CA sing N N 354 SER N H sing N N 355 SER N H2 sing N N 356 SER CA C sing N N 357 SER CA CB sing N N 358 SER CA HA sing N N 359 SER C O doub N N 360 SER C OXT sing N N 361 SER CB OG sing N N 362 SER CB HB2 sing N N 363 SER CB HB3 sing N N 364 SER OG HG sing N N 365 SER OXT HXT sing N N 366 THR N CA sing N N 367 THR N H sing N N 368 THR N H2 sing N N 369 THR CA C sing N N 370 THR CA CB sing N N 371 THR CA HA sing N N 372 THR C O doub N N 373 THR C OXT sing N N 374 THR CB OG1 sing N N 375 THR CB CG2 sing N N 376 THR CB HB sing N N 377 THR OG1 HG1 sing N N 378 THR CG2 HG21 sing N N 379 THR CG2 HG22 sing N N 380 THR CG2 HG23 sing N N 381 THR OXT HXT sing N N 382 TRP N CA sing N N 383 TRP N H sing N N 384 TRP N H2 sing N N 385 TRP CA C sing N N 386 TRP CA CB sing N N 387 TRP CA HA sing N N 388 TRP C O doub N N 389 TRP C OXT sing N N 390 TRP CB CG sing N N 391 TRP CB HB2 sing N N 392 TRP CB HB3 sing N N 393 TRP CG CD1 doub Y N 394 TRP CG CD2 sing Y N 395 TRP CD1 NE1 sing Y N 396 TRP CD1 HD1 sing N N 397 TRP CD2 CE2 doub Y N 398 TRP CD2 CE3 sing Y N 399 TRP NE1 CE2 sing Y N 400 TRP NE1 HE1 sing N N 401 TRP CE2 CZ2 sing Y N 402 TRP CE3 CZ3 doub Y N 403 TRP CE3 HE3 sing N N 404 TRP CZ2 CH2 doub Y N 405 TRP CZ2 HZ2 sing N N 406 TRP CZ3 CH2 sing Y N 407 TRP CZ3 HZ3 sing N N 408 TRP CH2 HH2 sing N N 409 TRP OXT HXT sing N N 410 TYR N CA sing N N 411 TYR N H sing N N 412 TYR N H2 sing N N 413 TYR CA C sing N N 414 TYR CA CB sing N N 415 TYR CA HA sing N N 416 TYR C O doub N N 417 TYR C OXT sing N N 418 TYR CB CG sing N N 419 TYR CB HB2 sing N N 420 TYR CB HB3 sing N N 421 TYR CG CD1 doub Y N 422 TYR CG CD2 sing Y N 423 TYR CD1 CE1 sing Y N 424 TYR CD1 HD1 sing N N 425 TYR CD2 CE2 doub Y N 426 TYR CD2 HD2 sing N N 427 TYR CE1 CZ doub Y N 428 TYR CE1 HE1 sing N N 429 TYR CE2 CZ sing Y N 430 TYR CE2 HE2 sing N N 431 TYR CZ OH sing N N 432 TYR OH HH sing N N 433 TYR OXT HXT sing N N 434 VAL N CA sing N N 435 VAL N H sing N N 436 VAL N H2 sing N N 437 VAL CA C sing N N 438 VAL CA CB sing N N 439 VAL CA HA sing N N 440 VAL C O doub N N 441 VAL C OXT sing N N 442 VAL CB CG1 sing N N 443 VAL CB CG2 sing N N 444 VAL CB HB sing N N 445 VAL CG1 HG11 sing N N 446 VAL CG1 HG12 sing N N 447 VAL CG1 HG13 sing N N 448 VAL CG2 HG21 sing N N 449 VAL CG2 HG22 sing N N 450 VAL CG2 HG23 sing N N 451 VAL OXT HXT sing N N 452 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 BMA 3 n 2 BMA 4 n 2 FUC 5 n # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 9PAI _pdbx_initial_refinement_model.details 'PDB ENTRY 9PAI' # _atom_sites.entry_id 3R4L _atom_sites.fract_transf_matrix[1][1] 0.013888 _atom_sites.fract_transf_matrix[1][2] 0.008018 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016036 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005142 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_