HEADER LYASE 18-MAR-11 3R5G TITLE CRYSTAL STRUCTURE OF THE ADENYLYL CYCLASE CYAB FROM P. AERUGINOSA COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYAB; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CATALYTIC DOMAIN, UNP RESIDUES 220-416; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: CYAB, PA3217; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ADENYLYL CYCLASE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR H.TOPAL,C.STEEGBORN REVDAT 4 13-SEP-23 3R5G 1 REMARK SEQADV REVDAT 3 15-FEB-12 3R5G 1 JRNL REVDAT 2 25-JAN-12 3R5G 1 JRNL REVDAT 1 11-JAN-12 3R5G 0 JRNL AUTH H.TOPAL,N.B.FULCHER,J.BITTERMAN,E.SALAZAR,J.BUCK,L.R.LEVIN, JRNL AUTH 2 M.J.CANN,M.C.WOLFGANG,C.STEEGBORN JRNL TITL CRYSTAL STRUCTURE AND REGULATION MECHANISMS OF THE CYAB JRNL TITL 2 ADENYLYL CYCLASE FROM THE HUMAN PATHOGEN PSEUDOMONAS JRNL TITL 3 AERUGINOSA. JRNL REF J.MOL.BIOL. V. 416 271 2012 JRNL REFN ISSN 0022-2836 JRNL PMID 22226839 JRNL DOI 10.1016/J.JMB.2011.12.045 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0110 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 48397 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2548 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2120 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2310 REMARK 3 BIN FREE R VALUE SET COUNT : 112 REMARK 3 BIN FREE R VALUE : 0.2870 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3054 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 317 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.10000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : -0.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.12000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.093 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.056 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.456 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3099 ; 0.028 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4160 ; 2.367 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 389 ; 6.052 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 138 ;36.129 ;23.768 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 588 ;16.014 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;22.226 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 470 ; 0.157 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2282 ; 0.013 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1927 ; 1.647 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3096 ; 2.705 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1172 ; 4.064 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1064 ; 6.645 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3R5G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-MAR-11. REMARK 100 THE DEPOSITION ID IS D_1000064512. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-OCT-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : DOUBLE XTAL SI(111) FIXED-EXIT REMARK 200 MONOCHROMATOR, FIRST XTAL LN2- REMARK 200 COOLED REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50946 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 48.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 61.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.36400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1WC1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.5, 10 % (V/V) 2 REMARK 280 -PROPANOL, 20 % (W/V) PEG 4000, VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 51.36000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -14.43156 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 93.65462 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 219 REMARK 465 ARG A 220 REMARK 465 LEU A 221 REMARK 465 GLY B 219 REMARK 465 ARG B 220 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 150 O HOH A 470 1.95 REMARK 500 CG MET A 281 O HOH A 432 2.09 REMARK 500 O HOH B 467 O HOH B 468 2.10 REMARK 500 OE2 GLU B 222 O HOH B 461 2.13 REMARK 500 NE2 GLN B 290 O HOH B 463 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 162 O HOH B 418 1565 2.02 REMARK 500 OH TYR B 336 OH TYR B 336 2656 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 307 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 MET A 310 CG - SD - CE ANGL. DEV. = 10.6 DEGREES REMARK 500 ASP A 384 CB - CG - OD1 ANGL. DEV. = 7.2 DEGREES REMARK 500 PRO A 402 C - N - CA ANGL. DEV. = -13.8 DEGREES REMARK 500 ARG A 412 NE - CZ - NH1 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG A 413 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ASP A 414 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ASP B 234 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG B 314 NE - CZ - NH1 ANGL. DEV. = -3.0 DEGREES REMARK 500 TYR B 336 CB - CG - CD1 ANGL. DEV. = -4.6 DEGREES REMARK 500 ASP B 390 CB - CG - OD1 ANGL. DEV. = 7.7 DEGREES REMARK 500 ASP B 390 CB - CG - OD2 ANGL. DEV. = -7.6 DEGREES REMARK 500 ASP B 414 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP B 414 CB - CG - OD2 ANGL. DEV. = -13.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 244 -14.00 -143.37 REMARK 500 ARG A 347 72.03 -156.80 REMARK 500 ARG B 347 71.00 -156.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1 DBREF 3R5G A 220 416 UNP Q9HZ23 Q9HZ23_PSEAE 220 416 DBREF 3R5G B 220 416 UNP Q9HZ23 Q9HZ23_PSEAE 220 416 SEQADV 3R5G GLY A 219 UNP Q9HZ23 EXPRESSION TAG SEQADV 3R5G GLY B 219 UNP Q9HZ23 EXPRESSION TAG SEQRES 1 A 198 GLY ARG LEU GLU THR GLN ARG LYS LYS LEU THR VAL PHE SEQRES 2 A 198 PHE SER ASP ILE ARG GLY PHE THR GLU LEU SER GLU GLU SEQRES 3 A 198 LEU GLU ALA GLU ALA LEU THR ASP LEU LEU ASN ASN TYR SEQRES 4 A 198 LEU ASN GLU MET SER LYS ILE ALA LEU LYS TYR GLY GLY SEQRES 5 A 198 THR ILE ASP LYS PHE VAL GLY ASP CYS VAL MET VAL PHE SEQRES 6 A 198 PHE GLY ASP PRO SER THR GLN GLY ALA LYS LYS ASP ALA SEQRES 7 A 198 VAL ALA ALA VAL SER MET GLY ILE ALA MET ARG LYS HIS SEQRES 8 A 198 MET LYS VAL LEU ARG GLN GLN TRP ARG ALA GLN GLY ILE SEQRES 9 A 198 THR LYS PRO LEU GLU ILE ARG MET GLY ILE ASN THR GLY SEQRES 10 A 198 TYR CYS THR VAL GLY ASN PHE GLY ALA ASP THR ARG MET SEQRES 11 A 198 ASP TYR THR ILE ILE GLY ARG GLU VAL ASN LEU ALA SER SEQRES 12 A 198 ARG LEU GLU SER ALA SER GLU ALA GLY GLU ILE LEU ILE SEQRES 13 A 198 SER HIS GLU THR TYR SER LEU ILE LYS ASP VAL ILE MET SEQRES 14 A 198 CYS ARG ASP LYS GLY GLN ILE ALA VAL LYS GLY PHE SER SEQRES 15 A 198 ARG PRO VAL GLN ILE TYR GLN VAL VAL ASP SER ARG ARG SEQRES 16 A 198 ASP LEU GLY SEQRES 1 B 198 GLY ARG LEU GLU THR GLN ARG LYS LYS LEU THR VAL PHE SEQRES 2 B 198 PHE SER ASP ILE ARG GLY PHE THR GLU LEU SER GLU GLU SEQRES 3 B 198 LEU GLU ALA GLU ALA LEU THR ASP LEU LEU ASN ASN TYR SEQRES 4 B 198 LEU ASN GLU MET SER LYS ILE ALA LEU LYS TYR GLY GLY SEQRES 5 B 198 THR ILE ASP LYS PHE VAL GLY ASP CYS VAL MET VAL PHE SEQRES 6 B 198 PHE GLY ASP PRO SER THR GLN GLY ALA LYS LYS ASP ALA SEQRES 7 B 198 VAL ALA ALA VAL SER MET GLY ILE ALA MET ARG LYS HIS SEQRES 8 B 198 MET LYS VAL LEU ARG GLN GLN TRP ARG ALA GLN GLY ILE SEQRES 9 B 198 THR LYS PRO LEU GLU ILE ARG MET GLY ILE ASN THR GLY SEQRES 10 B 198 TYR CYS THR VAL GLY ASN PHE GLY ALA ASP THR ARG MET SEQRES 11 B 198 ASP TYR THR ILE ILE GLY ARG GLU VAL ASN LEU ALA SER SEQRES 12 B 198 ARG LEU GLU SER ALA SER GLU ALA GLY GLU ILE LEU ILE SEQRES 13 B 198 SER HIS GLU THR TYR SER LEU ILE LYS ASP VAL ILE MET SEQRES 14 B 198 CYS ARG ASP LYS GLY GLN ILE ALA VAL LYS GLY PHE SER SEQRES 15 B 198 ARG PRO VAL GLN ILE TYR GLN VAL VAL ASP SER ARG ARG SEQRES 16 B 198 ASP LEU GLY HET GOL B 1 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL C3 H8 O3 FORMUL 4 HOH *317(H2 O) HELIX 1 1 GLY A 237 GLU A 243 1 7 HELIX 2 2 GLU A 246 GLY A 269 1 24 HELIX 3 3 GLY A 291 ALA A 319 1 29 HELIX 4 4 GLY A 354 SER A 367 1 14 HELIX 5 5 HIS A 376 LYS A 383 1 8 HELIX 6 6 GLY B 237 LEU B 245 1 9 HELIX 7 7 GLU B 246 GLY B 269 1 24 HELIX 8 8 GLY B 291 GLN B 320 1 30 HELIX 9 9 GLY B 354 SER B 367 1 14 HELIX 10 10 HIS B 376 LYS B 383 1 8 SHEET 1 A 5 THR A 271 VAL A 276 0 SHEET 2 A 5 CYS A 279 PHE A 284 -1 O PHE A 283 N THR A 271 SHEET 3 A 5 GLN A 224 ARG A 236 -1 N PHE A 231 O VAL A 282 SHEET 4 A 5 GLU A 327 ALA A 344 -1 O VAL A 339 N GLN A 224 SHEET 5 A 5 ARG A 347 ILE A 353 -1 O ASP A 349 N PHE A 342 SHEET 1 B 7 THR A 271 VAL A 276 0 SHEET 2 B 7 CYS A 279 PHE A 284 -1 O PHE A 283 N THR A 271 SHEET 3 B 7 GLN A 224 ARG A 236 -1 N PHE A 231 O VAL A 282 SHEET 4 B 7 GLU A 327 ALA A 344 -1 O VAL A 339 N GLN A 224 SHEET 5 B 7 ILE A 372 SER A 375 1 O LEU A 373 N MET A 330 SHEET 6 B 7 VAL A 403 VAL A 408 -1 O TYR A 406 N ILE A 374 SHEET 7 B 7 CYS A 388 ILE A 394 -1 N GLY A 392 O ILE A 405 SHEET 1 C 5 THR B 271 VAL B 276 0 SHEET 2 C 5 CYS B 279 PHE B 284 -1 O PHE B 283 N THR B 271 SHEET 3 C 5 GLN B 224 ARG B 236 -1 N PHE B 231 O VAL B 282 SHEET 4 C 5 GLU B 327 ALA B 344 -1 O VAL B 339 N GLN B 224 SHEET 5 C 5 ARG B 347 ILE B 353 -1 O THR B 351 N GLY B 340 SHEET 1 D 7 THR B 271 VAL B 276 0 SHEET 2 D 7 CYS B 279 PHE B 284 -1 O PHE B 283 N THR B 271 SHEET 3 D 7 GLN B 224 ARG B 236 -1 N PHE B 231 O VAL B 282 SHEET 4 D 7 GLU B 327 ALA B 344 -1 O VAL B 339 N GLN B 224 SHEET 5 D 7 ILE B 372 SER B 375 1 O LEU B 373 N MET B 330 SHEET 6 D 7 VAL B 403 VAL B 408 -1 O TYR B 406 N ILE B 374 SHEET 7 D 7 CYS B 388 ILE B 394 -1 N ARG B 389 O GLN B 407 CISPEP 1 ASP A 286 PRO A 287 0 -0.74 CISPEP 2 ASP B 286 PRO B 287 0 -2.90 SITE 1 AC1 4 HOH A 96 CYS A 388 LYS B 308 GLY B 416 CRYST1 51.360 36.310 94.760 90.00 98.76 90.00 P 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019470 0.000000 0.003002 0.00000 SCALE2 0.000000 0.027541 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010678 0.00000