data_3R69 # _entry.id 3R69 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3R69 pdb_00003r69 10.2210/pdb3r69/pdb RCSB RCSB064541 ? ? WWPDB D_1000064541 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3R68 'Structure of unbound PDZK1 PDZ3 solved by X-ray crystallography' unspecified PDB 2D90 'Structure of PDZK1 PDZ3 solved by NMR spectroscopy' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3R69 _pdbx_database_status.recvd_initial_deposition_date 2011-03-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kocher, O.' 1 'Birrane, G.' 2 'Krieger, M.' 3 # _citation.id primary _citation.title ;Identification of the PDZ3 Domain of the Adaptor Protein PDZK1 as a Second, Physiologically Functional Binding Site for the C Terminus of the High Density Lipoprotein Receptor Scavenger Receptor Class B Type I. ; _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 286 _citation.page_first 25171 _citation.page_last 25186 _citation.year 2011 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21602281 _citation.pdbx_database_id_DOI 10.1074/jbc.M111.242362 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kocher, O.' 1 ? primary 'Birrane, G.' 2 ? primary 'Yesilaltay, A.' 3 ? primary 'Shechter, S.' 4 ? primary 'Pal, R.' 5 ? primary 'Daniels, K.' 6 ? primary 'Krieger, M.' 7 ? # _cell.entry_id 3R69 _cell.length_a 47.638 _cell.length_b 61.396 _cell.length_c 64.010 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3R69 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Na(+)/H(+) exchange regulatory cofactor NHE-RF3, Scavenger receptor class B member 1' 9412.715 2 ? ? 'PDZ3 (UNP Residues 239-323), SR-BI C-terminus (UNP Residues 505-509)' 'Chimera between two genes' 2 non-polymer syn 'CITRIC ACID' 192.124 1 ? ? ? ? 3 water nat water 18.015 134 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;NHERF-3, CFTR-associated protein of 70 kDa, Na(+)/H(+) exchanger regulatory factor 3, Na/Pi cotransporter C-terminal-associated protein 1, NaPi-Cap1, PDZ domain-containing protein 1, Sodium-hydrogen exchanger regulatory factor 3, SR-BI ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSPRVVVIKKGSNGYGFYLRAGPEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLL VLDKQEAKL ; _entity_poly.pdbx_seq_one_letter_code_can ;GSPRVVVIKKGSNGYGFYLRAGPEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLL VLDKQEAKL ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 PRO n 1 4 ARG n 1 5 VAL n 1 6 VAL n 1 7 VAL n 1 8 ILE n 1 9 LYS n 1 10 LYS n 1 11 GLY n 1 12 SER n 1 13 ASN n 1 14 GLY n 1 15 TYR n 1 16 GLY n 1 17 PHE n 1 18 TYR n 1 19 LEU n 1 20 ARG n 1 21 ALA n 1 22 GLY n 1 23 PRO n 1 24 GLU n 1 25 GLN n 1 26 LYS n 1 27 GLY n 1 28 GLN n 1 29 ILE n 1 30 ILE n 1 31 LYS n 1 32 ASP n 1 33 ILE n 1 34 GLU n 1 35 PRO n 1 36 GLY n 1 37 SER n 1 38 PRO n 1 39 ALA n 1 40 GLU n 1 41 ALA n 1 42 ALA n 1 43 GLY n 1 44 LEU n 1 45 LYS n 1 46 ASN n 1 47 ASN n 1 48 ASP n 1 49 LEU n 1 50 VAL n 1 51 VAL n 1 52 ALA n 1 53 VAL n 1 54 ASN n 1 55 GLY n 1 56 LYS n 1 57 SER n 1 58 VAL n 1 59 GLU n 1 60 ALA n 1 61 LEU n 1 62 ASP n 1 63 HIS n 1 64 ASP n 1 65 GLY n 1 66 VAL n 1 67 VAL n 1 68 GLU n 1 69 MET n 1 70 ILE n 1 71 ARG n 1 72 LYS n 1 73 GLY n 1 74 GLY n 1 75 ASP n 1 76 GLN n 1 77 THR n 1 78 THR n 1 79 LEU n 1 80 LEU n 1 81 VAL n 1 82 LEU n 1 83 ASP n 1 84 LYS n 1 85 GLN n 1 86 GLU n 1 87 ALA n 1 88 LYS n 1 89 LEU n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? 3 84 mouse,mouse ? 'Cap70, Nherf3, Pdzk1, Scarb1' ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? JM109 ? ? ? ? ? ? ? Plasmid ? ? ? pGEX-4T-3 ? ? 1 2 sample ? 85 89 mouse,mouse ? 'Cap70, Nherf3, Pdzk1, Scarb1' ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? JM109 ? ? ? ? ? ? ? Plasmid ? ? ? pGEX-4T-3 ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP NHRF3_MOUSE Q9JIL4 1 ;PRVVVIKKGSNGYGFYLRAGPEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLLVL DKE ; 241 ? 2 UNP SCRB1_MOUSE Q61009 1 QEAKL 505 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3R69 A 3 ? 84 ? Q9JIL4 241 ? 322 ? 241 322 2 2 3R69 A 85 ? 89 ? Q61009 505 ? 509 ? 323 327 3 1 3R69 B 3 ? 84 ? Q9JIL4 241 ? 322 ? 241 322 4 2 3R69 B 85 ? 89 ? Q61009 505 ? 509 ? 323 327 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3R69 GLY A 1 ? UNP Q9JIL4 ? ? 'expression tag' 239 1 1 3R69 SER A 2 ? UNP Q9JIL4 ? ? 'expression tag' 240 2 3 3R69 GLY B 1 ? UNP Q9JIL4 ? ? 'expression tag' 239 3 3 3R69 SER B 2 ? UNP Q9JIL4 ? ? 'expression tag' 240 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CIT non-polymer . 'CITRIC ACID' ? 'C6 H8 O7' 192.124 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3R69 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.49 _exptl_crystal.density_percent_sol 50.53 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 3.5 _exptl_crystal_grow.pdbx_details '0.1 M citric acid pH 3.5, 25% PEG 3350, 5% ethylene glycol, VAPOR DIFFUSION, SITTING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2010-04-10 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111) CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.978 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X12C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X12C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.978 # _reflns.entry_id 3R69 _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 1.499 _reflns.number_obs 29138 _reflns.number_all 29138 _reflns.percent_possible_obs 94.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.499 _reflns_shell.d_res_low 1.55 _reflns_shell.percent_possible_all 66.4 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3R69 _refine.ls_number_reflns_obs 27563 _refine.ls_number_reflns_all 27563 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 23.93 _refine.ls_d_res_high 1.499 _refine.ls_percent_reflns_obs 94.23 _refine.ls_R_factor_obs 0.20160 _refine.ls_R_factor_all 0.20160 _refine.ls_R_factor_R_work 0.20034 _refine.ls_R_factor_R_free 0.22549 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 1435 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.949 _refine.correlation_coeff_Fo_to_Fc_free 0.943 _refine.B_iso_mean 16.819 _refine.aniso_B[1][1] 0.07 _refine.aniso_B[2][2] -0.07 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 3R68' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.081 _refine.overall_SU_ML 0.049 _refine.overall_SU_B 2.792 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R 0.081 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1267 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 13 _refine_hist.number_atoms_solvent 134 _refine_hist.number_atoms_total 1414 _refine_hist.d_res_high 1.499 _refine_hist.d_res_low 23.93 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.018 0.022 ? 1344 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.002 0.020 ? 920 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.718 2.009 ? 1820 ? 'X-RAY DIFFRACTION' r_angle_other_deg 0.974 3.000 ? 2282 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.316 5.000 ? 184 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 30.830 26.000 ? 55 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 13.095 15.000 ? 250 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 19.728 15.000 ? 7 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.106 0.200 ? 208 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.008 0.021 ? 1512 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.001 0.020 ? 227 ? 'X-RAY DIFFRACTION' r_mcbond_it 1.223 1.500 ? 866 ? 'X-RAY DIFFRACTION' r_mcbond_other 0.339 1.500 ? 366 ? 'X-RAY DIFFRACTION' r_mcangle_it 2.076 2.000 ? 1387 ? 'X-RAY DIFFRACTION' r_scbond_it 3.107 3.000 ? 478 ? 'X-RAY DIFFRACTION' r_scangle_it 5.209 4.500 ? 425 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.499 _refine_ls_shell.d_res_low 1.538 _refine_ls_shell.number_reflns_R_work 1342 _refine_ls_shell.R_factor_R_work 0.237 _refine_ls_shell.percent_reflns_obs 63.14 _refine_ls_shell.R_factor_R_free 0.265 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 61 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3R69 _struct.title 'Molecular analysis of the interaction of the HDL-receptor SR-BI with the PDZ3 domain of its adaptor protein PDZK1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3R69 _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'PDZ domain, Adaptor protein, SR-BI, chimera, SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 37 ? ALA A 42 ? SER A 275 ALA A 280 1 ? 6 HELX_P HELX_P2 2 ASP A 62 ? GLY A 73 ? ASP A 300 GLY A 311 1 ? 12 HELX_P HELX_P3 3 SER B 37 ? ALA B 42 ? SER B 275 ALA B 280 1 ? 6 HELX_P HELX_P4 4 ASP B 62 ? LYS B 72 ? ASP B 300 LYS B 310 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 4 ? C ? 5 ? D ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PRO A 3 ? LYS A 9 ? PRO A 241 LYS A 247 A 2 GLN A 76 ? LEU A 82 ? GLN A 314 LEU A 320 A 3 LEU A 49 ? VAL A 53 ? LEU A 287 VAL A 291 A 4 GLN A 28 ? LYS A 31 ? GLN A 266 LYS A 269 A 5 TYR A 18 ? ALA A 21 ? TYR A 256 ALA A 259 B 1 PRO A 3 ? LYS A 9 ? PRO A 241 LYS A 247 B 2 GLN A 76 ? LEU A 82 ? GLN A 314 LEU A 320 B 3 LEU A 49 ? VAL A 53 ? LEU A 287 VAL A 291 B 4 LYS A 56 ? SER A 57 ? LYS A 294 SER A 295 C 1 SER B 2 ? LYS B 9 ? SER B 240 LYS B 247 C 2 GLN B 76 ? ASP B 83 ? GLN B 314 ASP B 321 C 3 LEU B 49 ? VAL B 53 ? LEU B 287 VAL B 291 C 4 GLN B 28 ? LYS B 31 ? GLN B 266 LYS B 269 C 5 TYR B 18 ? ALA B 21 ? TYR B 256 ALA B 259 D 1 SER B 2 ? LYS B 9 ? SER B 240 LYS B 247 D 2 GLN B 76 ? ASP B 83 ? GLN B 314 ASP B 321 D 3 LEU B 49 ? VAL B 53 ? LEU B 287 VAL B 291 D 4 LYS B 56 ? SER B 57 ? LYS B 294 SER B 295 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 6 ? N VAL A 244 O LEU A 79 ? O LEU A 317 A 2 3 O LEU A 80 ? O LEU A 318 N VAL A 51 ? N VAL A 289 A 3 4 O VAL A 50 ? O VAL A 288 N GLN A 28 ? N GLN A 266 A 4 5 O ILE A 29 ? O ILE A 267 N ARG A 20 ? N ARG A 258 B 1 2 N VAL A 6 ? N VAL A 244 O LEU A 79 ? O LEU A 317 B 2 3 O LEU A 80 ? O LEU A 318 N VAL A 51 ? N VAL A 289 B 3 4 N VAL A 53 ? N VAL A 291 O LYS A 56 ? O LYS A 294 C 1 2 N ILE B 8 ? N ILE B 246 O THR B 77 ? O THR B 315 C 2 3 O LEU B 80 ? O LEU B 318 N VAL B 51 ? N VAL B 289 C 3 4 O VAL B 50 ? O VAL B 288 N GLN B 28 ? N GLN B 266 C 4 5 O ILE B 29 ? O ILE B 267 N ARG B 20 ? N ARG B 258 D 1 2 N ILE B 8 ? N ILE B 246 O THR B 77 ? O THR B 315 D 2 3 O LEU B 80 ? O LEU B 318 N VAL B 51 ? N VAL B 289 D 3 4 N VAL B 53 ? N VAL B 291 O LYS B 56 ? O LYS B 294 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id B _struct_site.pdbx_auth_comp_id CIT _struct_site.pdbx_auth_seq_id 2502 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 11 _struct_site.details 'BINDING SITE FOR RESIDUE CIT B 2502' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 HOH D . ? HOH A 41 . ? 1_555 ? 2 AC1 11 GLY A 55 ? GLY A 293 . ? 1_555 ? 3 AC1 11 LYS A 56 ? LYS A 294 . ? 1_555 ? 4 AC1 11 SER A 57 ? SER A 295 . ? 1_555 ? 5 AC1 11 HOH E . ? HOH B 102 . ? 1_555 ? 6 AC1 11 GLY B 1 ? GLY B 239 . ? 1_555 ? 7 AC1 11 ASN B 47 ? ASN B 285 . ? 1_555 ? 8 AC1 11 LEU B 49 ? LEU B 287 . ? 1_555 ? 9 AC1 11 LEU B 82 ? LEU B 320 . ? 1_555 ? 10 AC1 11 ASP B 83 ? ASP B 321 . ? 1_555 ? 11 AC1 11 LYS B 84 ? LYS B 322 . ? 1_555 ? # _database_PDB_matrix.entry_id 3R69 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3R69 _atom_sites.fract_transf_matrix[1][1] 0.020992 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016288 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015623 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 239 ? ? ? A . n A 1 2 SER 2 240 240 SER SER A . n A 1 3 PRO 3 241 241 PRO PRO A . n A 1 4 ARG 4 242 242 ARG ARG A . n A 1 5 VAL 5 243 243 VAL VAL A . n A 1 6 VAL 6 244 244 VAL VAL A . n A 1 7 VAL 7 245 245 VAL VAL A . n A 1 8 ILE 8 246 246 ILE ILE A . n A 1 9 LYS 9 247 247 LYS LYS A . n A 1 10 LYS 10 248 248 LYS LYS A . n A 1 11 GLY 11 249 249 GLY GLY A . n A 1 12 SER 12 250 250 SER SER A . n A 1 13 ASN 13 251 251 ASN ASN A . n A 1 14 GLY 14 252 252 GLY GLY A . n A 1 15 TYR 15 253 253 TYR TYR A . n A 1 16 GLY 16 254 254 GLY GLY A . n A 1 17 PHE 17 255 255 PHE PHE A . n A 1 18 TYR 18 256 256 TYR TYR A . n A 1 19 LEU 19 257 257 LEU LEU A . n A 1 20 ARG 20 258 258 ARG ARG A . n A 1 21 ALA 21 259 259 ALA ALA A . n A 1 22 GLY 22 260 260 GLY GLY A . n A 1 23 PRO 23 261 261 PRO PRO A . n A 1 24 GLU 24 262 ? ? ? A . n A 1 25 GLN 25 263 ? ? ? A . n A 1 26 LYS 26 264 ? ? ? A . n A 1 27 GLY 27 265 265 GLY GLY A . n A 1 28 GLN 28 266 266 GLN GLN A . n A 1 29 ILE 29 267 267 ILE ILE A . n A 1 30 ILE 30 268 268 ILE ILE A . n A 1 31 LYS 31 269 269 LYS LYS A . n A 1 32 ASP 32 270 270 ASP ASP A . n A 1 33 ILE 33 271 271 ILE ILE A . n A 1 34 GLU 34 272 272 GLU GLU A . n A 1 35 PRO 35 273 273 PRO PRO A . n A 1 36 GLY 36 274 274 GLY GLY A . n A 1 37 SER 37 275 275 SER SER A . n A 1 38 PRO 38 276 276 PRO PRO A . n A 1 39 ALA 39 277 277 ALA ALA A . n A 1 40 GLU 40 278 278 GLU GLU A . n A 1 41 ALA 41 279 279 ALA ALA A . n A 1 42 ALA 42 280 280 ALA ALA A . n A 1 43 GLY 43 281 281 GLY GLY A . n A 1 44 LEU 44 282 282 LEU LEU A . n A 1 45 LYS 45 283 283 LYS LYS A . n A 1 46 ASN 46 284 284 ASN ASN A . n A 1 47 ASN 47 285 285 ASN ASN A . n A 1 48 ASP 48 286 286 ASP ASP A . n A 1 49 LEU 49 287 287 LEU LEU A . n A 1 50 VAL 50 288 288 VAL VAL A . n A 1 51 VAL 51 289 289 VAL VAL A . n A 1 52 ALA 52 290 290 ALA ALA A . n A 1 53 VAL 53 291 291 VAL VAL A . n A 1 54 ASN 54 292 292 ASN ASN A . n A 1 55 GLY 55 293 293 GLY GLY A . n A 1 56 LYS 56 294 294 LYS LYS A . n A 1 57 SER 57 295 295 SER SER A . n A 1 58 VAL 58 296 296 VAL VAL A . n A 1 59 GLU 59 297 297 GLU GLU A . n A 1 60 ALA 60 298 298 ALA ALA A . n A 1 61 LEU 61 299 299 LEU LEU A . n A 1 62 ASP 62 300 300 ASP ASP A . n A 1 63 HIS 63 301 301 HIS HIS A . n A 1 64 ASP 64 302 302 ASP ASP A . n A 1 65 GLY 65 303 303 GLY GLY A . n A 1 66 VAL 66 304 304 VAL VAL A . n A 1 67 VAL 67 305 305 VAL VAL A . n A 1 68 GLU 68 306 306 GLU GLU A . n A 1 69 MET 69 307 307 MET MET A . n A 1 70 ILE 70 308 308 ILE ILE A . n A 1 71 ARG 71 309 309 ARG ARG A . n A 1 72 LYS 72 310 310 LYS LYS A . n A 1 73 GLY 73 311 311 GLY GLY A . n A 1 74 GLY 74 312 312 GLY GLY A . n A 1 75 ASP 75 313 313 ASP ASP A . n A 1 76 GLN 76 314 314 GLN GLN A . n A 1 77 THR 77 315 315 THR THR A . n A 1 78 THR 78 316 316 THR THR A . n A 1 79 LEU 79 317 317 LEU LEU A . n A 1 80 LEU 80 318 318 LEU LEU A . n A 1 81 VAL 81 319 319 VAL VAL A . n A 1 82 LEU 82 320 320 LEU LEU A . n A 1 83 ASP 83 321 321 ASP ASP A . n A 1 84 LYS 84 322 322 LYS LYS A . n A 1 85 GLN 85 323 323 GLN GLN A . n A 1 86 GLU 86 324 324 GLU GLU A . n A 1 87 ALA 87 325 325 ALA ALA A . n A 1 88 LYS 88 326 326 LYS LYS A . n A 1 89 LEU 89 327 327 LEU LEU A . n B 1 1 GLY 1 239 239 GLY GLY B . n B 1 2 SER 2 240 240 SER SER B . n B 1 3 PRO 3 241 241 PRO PRO B . n B 1 4 ARG 4 242 242 ARG ARG B . n B 1 5 VAL 5 243 243 VAL VAL B . n B 1 6 VAL 6 244 244 VAL VAL B . n B 1 7 VAL 7 245 245 VAL VAL B . n B 1 8 ILE 8 246 246 ILE ILE B . n B 1 9 LYS 9 247 247 LYS LYS B . n B 1 10 LYS 10 248 248 LYS LYS B . n B 1 11 GLY 11 249 249 GLY GLY B . n B 1 12 SER 12 250 250 SER SER B . n B 1 13 ASN 13 251 251 ASN ASN B . n B 1 14 GLY 14 252 252 GLY GLY B . n B 1 15 TYR 15 253 253 TYR TYR B . n B 1 16 GLY 16 254 254 GLY GLY B . n B 1 17 PHE 17 255 255 PHE PHE B . n B 1 18 TYR 18 256 256 TYR TYR B . n B 1 19 LEU 19 257 257 LEU LEU B . n B 1 20 ARG 20 258 258 ARG ARG B . n B 1 21 ALA 21 259 259 ALA ALA B . n B 1 22 GLY 22 260 260 GLY GLY B . n B 1 23 PRO 23 261 261 PRO ALA B . n B 1 24 GLU 24 262 262 GLU ALA B . n B 1 25 GLN 25 263 ? ? ? B . n B 1 26 LYS 26 264 ? ? ? B . n B 1 27 GLY 27 265 265 GLY GLY B . n B 1 28 GLN 28 266 266 GLN GLN B . n B 1 29 ILE 29 267 267 ILE ILE B . n B 1 30 ILE 30 268 268 ILE ILE B . n B 1 31 LYS 31 269 269 LYS LYS B . n B 1 32 ASP 32 270 270 ASP ASP B . n B 1 33 ILE 33 271 271 ILE ILE B . n B 1 34 GLU 34 272 272 GLU GLU B . n B 1 35 PRO 35 273 273 PRO PRO B . n B 1 36 GLY 36 274 274 GLY GLY B . n B 1 37 SER 37 275 275 SER SER B . n B 1 38 PRO 38 276 276 PRO PRO B . n B 1 39 ALA 39 277 277 ALA ALA B . n B 1 40 GLU 40 278 278 GLU GLU B . n B 1 41 ALA 41 279 279 ALA ALA B . n B 1 42 ALA 42 280 280 ALA ALA B . n B 1 43 GLY 43 281 281 GLY GLY B . n B 1 44 LEU 44 282 282 LEU LEU B . n B 1 45 LYS 45 283 283 LYS LYS B . n B 1 46 ASN 46 284 284 ASN ASN B . n B 1 47 ASN 47 285 285 ASN ASN B . n B 1 48 ASP 48 286 286 ASP ASP B . n B 1 49 LEU 49 287 287 LEU LEU B . n B 1 50 VAL 50 288 288 VAL VAL B . n B 1 51 VAL 51 289 289 VAL VAL B . n B 1 52 ALA 52 290 290 ALA ALA B . n B 1 53 VAL 53 291 291 VAL VAL B . n B 1 54 ASN 54 292 292 ASN ASN B . n B 1 55 GLY 55 293 293 GLY GLY B . n B 1 56 LYS 56 294 294 LYS LYS B . n B 1 57 SER 57 295 295 SER SER B . n B 1 58 VAL 58 296 296 VAL VAL B . n B 1 59 GLU 59 297 297 GLU GLU B . n B 1 60 ALA 60 298 298 ALA ALA B . n B 1 61 LEU 61 299 299 LEU LEU B . n B 1 62 ASP 62 300 300 ASP ASP B . n B 1 63 HIS 63 301 301 HIS HIS B . n B 1 64 ASP 64 302 302 ASP ASP B . n B 1 65 GLY 65 303 303 GLY GLY B . n B 1 66 VAL 66 304 304 VAL VAL B . n B 1 67 VAL 67 305 305 VAL VAL B . n B 1 68 GLU 68 306 306 GLU GLU B . n B 1 69 MET 69 307 307 MET MET B . n B 1 70 ILE 70 308 308 ILE ILE B . n B 1 71 ARG 71 309 309 ARG ARG B . n B 1 72 LYS 72 310 310 LYS LYS B . n B 1 73 GLY 73 311 311 GLY GLY B . n B 1 74 GLY 74 312 312 GLY GLY B . n B 1 75 ASP 75 313 313 ASP ASP B . n B 1 76 GLN 76 314 314 GLN GLN B . n B 1 77 THR 77 315 315 THR THR B . n B 1 78 THR 78 316 316 THR THR B . n B 1 79 LEU 79 317 317 LEU LEU B . n B 1 80 LEU 80 318 318 LEU LEU B . n B 1 81 VAL 81 319 319 VAL VAL B . n B 1 82 LEU 82 320 320 LEU LEU B . n B 1 83 ASP 83 321 321 ASP ASP B . n B 1 84 LYS 84 322 322 LYS LYS B . n B 1 85 GLN 85 323 323 GLN GLN B . n B 1 86 GLU 86 324 324 GLU GLU B . n B 1 87 ALA 87 325 325 ALA ALA B . n B 1 88 LYS 88 326 326 LYS LYS B . n B 1 89 LEU 89 327 327 LEU LEU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CIT 1 2502 2502 CIT CIT B . D 3 HOH 1 7 7 HOH HOH A . D 3 HOH 2 8 8 HOH HOH A . D 3 HOH 3 9 9 HOH HOH A . D 3 HOH 4 10 10 HOH HOH A . D 3 HOH 5 11 11 HOH HOH A . D 3 HOH 6 12 12 HOH HOH A . D 3 HOH 7 13 13 HOH HOH A . D 3 HOH 8 14 14 HOH HOH A . D 3 HOH 9 15 15 HOH HOH A . D 3 HOH 10 16 16 HOH HOH A . D 3 HOH 11 17 17 HOH HOH A . D 3 HOH 12 20 20 HOH HOH A . D 3 HOH 13 21 21 HOH HOH A . D 3 HOH 14 22 22 HOH HOH A . D 3 HOH 15 23 23 HOH HOH A . D 3 HOH 16 25 25 HOH HOH A . D 3 HOH 17 27 27 HOH HOH A . D 3 HOH 18 28 28 HOH HOH A . D 3 HOH 19 30 30 HOH HOH A . D 3 HOH 20 31 31 HOH HOH A . D 3 HOH 21 32 32 HOH HOH A . D 3 HOH 22 33 33 HOH HOH A . D 3 HOH 23 34 34 HOH HOH A . D 3 HOH 24 37 37 HOH HOH A . D 3 HOH 25 39 39 HOH HOH A . D 3 HOH 26 40 40 HOH HOH A . D 3 HOH 27 41 41 HOH HOH A . D 3 HOH 28 42 42 HOH HOH A . D 3 HOH 29 43 43 HOH HOH A . D 3 HOH 30 44 44 HOH HOH A . D 3 HOH 31 45 45 HOH HOH A . D 3 HOH 32 46 46 HOH HOH A . D 3 HOH 33 47 47 HOH HOH A . D 3 HOH 34 48 48 HOH HOH A . D 3 HOH 35 50 50 HOH HOH A . D 3 HOH 36 51 51 HOH HOH A . D 3 HOH 37 53 53 HOH HOH A . D 3 HOH 38 55 55 HOH HOH A . D 3 HOH 39 56 56 HOH HOH A . D 3 HOH 40 57 57 HOH HOH A . D 3 HOH 41 60 60 HOH HOH A . D 3 HOH 42 62 62 HOH HOH A . D 3 HOH 43 63 63 HOH HOH A . D 3 HOH 44 64 64 HOH HOH A . D 3 HOH 45 65 65 HOH HOH A . D 3 HOH 46 78 78 HOH HOH A . D 3 HOH 47 83 83 HOH HOH A . D 3 HOH 48 88 88 HOH HOH A . D 3 HOH 49 89 89 HOH HOH A . D 3 HOH 50 91 91 HOH HOH A . D 3 HOH 51 92 92 HOH HOH A . D 3 HOH 52 93 93 HOH HOH A . D 3 HOH 53 96 96 HOH HOH A . D 3 HOH 54 97 97 HOH HOH A . D 3 HOH 55 100 100 HOH HOH A . D 3 HOH 56 101 101 HOH HOH A . D 3 HOH 57 105 105 HOH HOH A . D 3 HOH 58 107 107 HOH HOH A . D 3 HOH 59 108 108 HOH HOH A . D 3 HOH 60 110 110 HOH HOH A . D 3 HOH 61 111 111 HOH HOH A . D 3 HOH 62 114 114 HOH HOH A . D 3 HOH 63 115 115 HOH HOH A . D 3 HOH 64 116 116 HOH HOH A . D 3 HOH 65 117 117 HOH HOH A . D 3 HOH 66 135 135 HOH HOH A . D 3 HOH 67 137 137 HOH HOH A . D 3 HOH 68 138 138 HOH HOH A . D 3 HOH 69 139 139 HOH HOH A . D 3 HOH 70 140 140 HOH HOH A . D 3 HOH 71 141 141 HOH HOH A . D 3 HOH 72 145 145 HOH HOH A . D 3 HOH 73 148 148 HOH HOH A . D 3 HOH 74 149 149 HOH HOH A . E 3 HOH 1 1 1 HOH HOH B . E 3 HOH 2 2 2 HOH HOH B . E 3 HOH 3 3 3 HOH HOH B . E 3 HOH 4 4 4 HOH HOH B . E 3 HOH 5 5 5 HOH HOH B . E 3 HOH 6 6 6 HOH HOH B . E 3 HOH 7 18 18 HOH HOH B . E 3 HOH 8 19 19 HOH HOH B . E 3 HOH 9 24 24 HOH HOH B . E 3 HOH 10 26 26 HOH HOH B . E 3 HOH 11 29 29 HOH HOH B . E 3 HOH 12 35 35 HOH HOH B . E 3 HOH 13 36 36 HOH HOH B . E 3 HOH 14 38 38 HOH HOH B . E 3 HOH 15 49 49 HOH HOH B . E 3 HOH 16 54 54 HOH HOH B . E 3 HOH 17 58 58 HOH HOH B . E 3 HOH 18 59 59 HOH HOH B . E 3 HOH 19 61 61 HOH HOH B . E 3 HOH 20 66 66 HOH HOH B . E 3 HOH 21 67 67 HOH HOH B . E 3 HOH 22 68 68 HOH HOH B . E 3 HOH 23 69 69 HOH HOH B . E 3 HOH 24 71 71 HOH HOH B . E 3 HOH 25 72 72 HOH HOH B . E 3 HOH 26 73 73 HOH HOH B . E 3 HOH 27 74 74 HOH HOH B . E 3 HOH 28 75 75 HOH HOH B . E 3 HOH 29 76 76 HOH HOH B . E 3 HOH 30 77 77 HOH HOH B . E 3 HOH 31 79 79 HOH HOH B . E 3 HOH 32 84 84 HOH HOH B . E 3 HOH 33 87 87 HOH HOH B . E 3 HOH 34 95 95 HOH HOH B . E 3 HOH 35 98 98 HOH HOH B . E 3 HOH 36 99 99 HOH HOH B . E 3 HOH 37 102 102 HOH HOH B . E 3 HOH 38 103 103 HOH HOH B . E 3 HOH 39 104 104 HOH HOH B . E 3 HOH 40 106 106 HOH HOH B . E 3 HOH 41 112 112 HOH HOH B . E 3 HOH 42 118 118 HOH HOH B . E 3 HOH 43 119 119 HOH HOH B . E 3 HOH 44 120 120 HOH HOH B . E 3 HOH 45 121 121 HOH HOH B . E 3 HOH 46 122 122 HOH HOH B . E 3 HOH 47 123 123 HOH HOH B . E 3 HOH 48 124 124 HOH HOH B . E 3 HOH 49 125 125 HOH HOH B . E 3 HOH 50 126 126 HOH HOH B . E 3 HOH 51 127 127 HOH HOH B . E 3 HOH 52 128 128 HOH HOH B . E 3 HOH 53 129 129 HOH HOH B . E 3 HOH 54 130 130 HOH HOH B . E 3 HOH 55 131 131 HOH HOH B . E 3 HOH 56 132 132 HOH HOH B . E 3 HOH 57 133 133 HOH HOH B . E 3 HOH 58 134 134 HOH HOH B . E 3 HOH 59 144 144 HOH HOH B . E 3 HOH 60 146 146 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 3 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,D 2 1 B,C,E 3 1 A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 3 'ABSA (A^2)' 1450 ? 3 MORE -7 ? 3 'SSA (A^2)' 10060 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-05-18 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-07-27 4 'Structure model' 1 3 2017-07-26 5 'Structure model' 1 4 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' Advisory 4 4 'Structure model' 'Refinement description' 5 4 'Structure model' 'Source and taxonomy' 6 5 'Structure model' Advisory 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Derived calculations' 10 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' entity_src_gen 2 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 3 4 'Structure model' software 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' database_2 7 5 'Structure model' pdbx_initial_refinement_model 8 5 'Structure model' pdbx_unobs_or_zero_occ_atoms 9 5 'Structure model' struct_ref_seq_dif 10 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_ref_seq_dif.details' 4 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 19.9350 25.5530 33.0570 0.0267 0.0552 0.0581 0.0064 0.0115 -0.0004 0.2110 0.9876 1.1715 0.0659 -0.0471 -0.7403 -0.0476 0.0396 -0.0461 0.0732 0.0242 0.0572 -0.0585 0.0809 0.0234 'X-RAY DIFFRACTION' 2 ? refined 17.2530 46.9550 21.2910 0.0772 0.0701 0.0365 -0.0049 -0.0012 0.0104 0.1761 2.6785 1.7729 -0.2957 0.5353 -1.4401 -0.0196 0.0367 0.0094 0.3582 -0.0367 -0.0467 -0.1839 0.0871 0.0563 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 240 ? ? A 327 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 239 ? ? B 327 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CBASS 'data collection' . ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.5.0109 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 300 ? ? CG A ASP 300 ? ? OD1 A ASP 300 ? ? 124.01 118.30 5.71 0.90 N 2 1 CB B ASP 286 ? ? CG B ASP 286 ? ? OD1 B ASP 286 ? ? 124.06 118.30 5.76 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 298 ? ? 57.45 16.06 2 1 GLN A 323 ? ? -102.46 67.57 3 1 ASN B 251 ? ? -119.99 50.66 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B PRO 261 ? CG ? B PRO 23 CG 2 1 Y 1 B PRO 261 ? CD ? B PRO 23 CD 3 1 Y 1 B GLU 262 ? CG ? B GLU 24 CG 4 1 Y 1 B GLU 262 ? CD ? B GLU 24 CD 5 1 Y 1 B GLU 262 ? OE1 ? B GLU 24 OE1 6 1 Y 1 B GLU 262 ? OE2 ? B GLU 24 OE2 7 1 Y 0 B ARG 309 ? CA A B ARG 71 CA 8 1 Y 0 B ARG 309 ? CB A B ARG 71 CB 9 1 Y 0 B ARG 309 ? CG A B ARG 71 CG 10 1 Y 0 B ARG 309 ? CD A B ARG 71 CD 11 1 Y 0 B ARG 309 ? NE A B ARG 71 NE 12 1 Y 0 B ARG 309 ? CZ A B ARG 71 CZ 13 1 Y 0 B ARG 309 ? NH1 A B ARG 71 NH1 14 1 Y 0 B ARG 309 ? NH2 A B ARG 71 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 239 ? A GLY 1 2 1 Y 1 A GLU 262 ? A GLU 24 3 1 Y 1 A GLN 263 ? A GLN 25 4 1 Y 1 A LYS 264 ? A LYS 26 5 1 Y 1 B GLN 263 ? B GLN 25 6 1 Y 1 B LYS 264 ? B LYS 26 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CIT C1 C N N 74 CIT O1 O N N 75 CIT O2 O N N 76 CIT C2 C N N 77 CIT C3 C N N 78 CIT O7 O N N 79 CIT C4 C N N 80 CIT C5 C N N 81 CIT O3 O N N 82 CIT O4 O N N 83 CIT C6 C N N 84 CIT O5 O N N 85 CIT O6 O N N 86 CIT HO2 H N N 87 CIT H21 H N N 88 CIT H22 H N N 89 CIT HO7 H N N 90 CIT H41 H N N 91 CIT H42 H N N 92 CIT HO4 H N N 93 CIT HO6 H N N 94 GLN N N N N 95 GLN CA C N S 96 GLN C C N N 97 GLN O O N N 98 GLN CB C N N 99 GLN CG C N N 100 GLN CD C N N 101 GLN OE1 O N N 102 GLN NE2 N N N 103 GLN OXT O N N 104 GLN H H N N 105 GLN H2 H N N 106 GLN HA H N N 107 GLN HB2 H N N 108 GLN HB3 H N N 109 GLN HG2 H N N 110 GLN HG3 H N N 111 GLN HE21 H N N 112 GLN HE22 H N N 113 GLN HXT H N N 114 GLU N N N N 115 GLU CA C N S 116 GLU C C N N 117 GLU O O N N 118 GLU CB C N N 119 GLU CG C N N 120 GLU CD C N N 121 GLU OE1 O N N 122 GLU OE2 O N N 123 GLU OXT O N N 124 GLU H H N N 125 GLU H2 H N N 126 GLU HA H N N 127 GLU HB2 H N N 128 GLU HB3 H N N 129 GLU HG2 H N N 130 GLU HG3 H N N 131 GLU HE2 H N N 132 GLU HXT H N N 133 GLY N N N N 134 GLY CA C N N 135 GLY C C N N 136 GLY O O N N 137 GLY OXT O N N 138 GLY H H N N 139 GLY H2 H N N 140 GLY HA2 H N N 141 GLY HA3 H N N 142 GLY HXT H N N 143 HIS N N N N 144 HIS CA C N S 145 HIS C C N N 146 HIS O O N N 147 HIS CB C N N 148 HIS CG C Y N 149 HIS ND1 N Y N 150 HIS CD2 C Y N 151 HIS CE1 C Y N 152 HIS NE2 N Y N 153 HIS OXT O N N 154 HIS H H N N 155 HIS H2 H N N 156 HIS HA H N N 157 HIS HB2 H N N 158 HIS HB3 H N N 159 HIS HD1 H N N 160 HIS HD2 H N N 161 HIS HE1 H N N 162 HIS HE2 H N N 163 HIS HXT H N N 164 HOH O O N N 165 HOH H1 H N N 166 HOH H2 H N N 167 ILE N N N N 168 ILE CA C N S 169 ILE C C N N 170 ILE O O N N 171 ILE CB C N S 172 ILE CG1 C N N 173 ILE CG2 C N N 174 ILE CD1 C N N 175 ILE OXT O N N 176 ILE H H N N 177 ILE H2 H N N 178 ILE HA H N N 179 ILE HB H N N 180 ILE HG12 H N N 181 ILE HG13 H N N 182 ILE HG21 H N N 183 ILE HG22 H N N 184 ILE HG23 H N N 185 ILE HD11 H N N 186 ILE HD12 H N N 187 ILE HD13 H N N 188 ILE HXT H N N 189 LEU N N N N 190 LEU CA C N S 191 LEU C C N N 192 LEU O O N N 193 LEU CB C N N 194 LEU CG C N N 195 LEU CD1 C N N 196 LEU CD2 C N N 197 LEU OXT O N N 198 LEU H H N N 199 LEU H2 H N N 200 LEU HA H N N 201 LEU HB2 H N N 202 LEU HB3 H N N 203 LEU HG H N N 204 LEU HD11 H N N 205 LEU HD12 H N N 206 LEU HD13 H N N 207 LEU HD21 H N N 208 LEU HD22 H N N 209 LEU HD23 H N N 210 LEU HXT H N N 211 LYS N N N N 212 LYS CA C N S 213 LYS C C N N 214 LYS O O N N 215 LYS CB C N N 216 LYS CG C N N 217 LYS CD C N N 218 LYS CE C N N 219 LYS NZ N N N 220 LYS OXT O N N 221 LYS H H N N 222 LYS H2 H N N 223 LYS HA H N N 224 LYS HB2 H N N 225 LYS HB3 H N N 226 LYS HG2 H N N 227 LYS HG3 H N N 228 LYS HD2 H N N 229 LYS HD3 H N N 230 LYS HE2 H N N 231 LYS HE3 H N N 232 LYS HZ1 H N N 233 LYS HZ2 H N N 234 LYS HZ3 H N N 235 LYS HXT H N N 236 MET N N N N 237 MET CA C N S 238 MET C C N N 239 MET O O N N 240 MET CB C N N 241 MET CG C N N 242 MET SD S N N 243 MET CE C N N 244 MET OXT O N N 245 MET H H N N 246 MET H2 H N N 247 MET HA H N N 248 MET HB2 H N N 249 MET HB3 H N N 250 MET HG2 H N N 251 MET HG3 H N N 252 MET HE1 H N N 253 MET HE2 H N N 254 MET HE3 H N N 255 MET HXT H N N 256 PHE N N N N 257 PHE CA C N S 258 PHE C C N N 259 PHE O O N N 260 PHE CB C N N 261 PHE CG C Y N 262 PHE CD1 C Y N 263 PHE CD2 C Y N 264 PHE CE1 C Y N 265 PHE CE2 C Y N 266 PHE CZ C Y N 267 PHE OXT O N N 268 PHE H H N N 269 PHE H2 H N N 270 PHE HA H N N 271 PHE HB2 H N N 272 PHE HB3 H N N 273 PHE HD1 H N N 274 PHE HD2 H N N 275 PHE HE1 H N N 276 PHE HE2 H N N 277 PHE HZ H N N 278 PHE HXT H N N 279 PRO N N N N 280 PRO CA C N S 281 PRO C C N N 282 PRO O O N N 283 PRO CB C N N 284 PRO CG C N N 285 PRO CD C N N 286 PRO OXT O N N 287 PRO H H N N 288 PRO HA H N N 289 PRO HB2 H N N 290 PRO HB3 H N N 291 PRO HG2 H N N 292 PRO HG3 H N N 293 PRO HD2 H N N 294 PRO HD3 H N N 295 PRO HXT H N N 296 SER N N N N 297 SER CA C N S 298 SER C C N N 299 SER O O N N 300 SER CB C N N 301 SER OG O N N 302 SER OXT O N N 303 SER H H N N 304 SER H2 H N N 305 SER HA H N N 306 SER HB2 H N N 307 SER HB3 H N N 308 SER HG H N N 309 SER HXT H N N 310 THR N N N N 311 THR CA C N S 312 THR C C N N 313 THR O O N N 314 THR CB C N R 315 THR OG1 O N N 316 THR CG2 C N N 317 THR OXT O N N 318 THR H H N N 319 THR H2 H N N 320 THR HA H N N 321 THR HB H N N 322 THR HG1 H N N 323 THR HG21 H N N 324 THR HG22 H N N 325 THR HG23 H N N 326 THR HXT H N N 327 TYR N N N N 328 TYR CA C N S 329 TYR C C N N 330 TYR O O N N 331 TYR CB C N N 332 TYR CG C Y N 333 TYR CD1 C Y N 334 TYR CD2 C Y N 335 TYR CE1 C Y N 336 TYR CE2 C Y N 337 TYR CZ C Y N 338 TYR OH O N N 339 TYR OXT O N N 340 TYR H H N N 341 TYR H2 H N N 342 TYR HA H N N 343 TYR HB2 H N N 344 TYR HB3 H N N 345 TYR HD1 H N N 346 TYR HD2 H N N 347 TYR HE1 H N N 348 TYR HE2 H N N 349 TYR HH H N N 350 TYR HXT H N N 351 VAL N N N N 352 VAL CA C N S 353 VAL C C N N 354 VAL O O N N 355 VAL CB C N N 356 VAL CG1 C N N 357 VAL CG2 C N N 358 VAL OXT O N N 359 VAL H H N N 360 VAL H2 H N N 361 VAL HA H N N 362 VAL HB H N N 363 VAL HG11 H N N 364 VAL HG12 H N N 365 VAL HG13 H N N 366 VAL HG21 H N N 367 VAL HG22 H N N 368 VAL HG23 H N N 369 VAL HXT H N N 370 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CIT C1 O1 doub N N 70 CIT C1 O2 sing N N 71 CIT C1 C2 sing N N 72 CIT O2 HO2 sing N N 73 CIT C2 C3 sing N N 74 CIT C2 H21 sing N N 75 CIT C2 H22 sing N N 76 CIT C3 O7 sing N N 77 CIT C3 C4 sing N N 78 CIT C3 C6 sing N N 79 CIT O7 HO7 sing N N 80 CIT C4 C5 sing N N 81 CIT C4 H41 sing N N 82 CIT C4 H42 sing N N 83 CIT C5 O3 doub N N 84 CIT C5 O4 sing N N 85 CIT O4 HO4 sing N N 86 CIT C6 O5 doub N N 87 CIT C6 O6 sing N N 88 CIT O6 HO6 sing N N 89 GLN N CA sing N N 90 GLN N H sing N N 91 GLN N H2 sing N N 92 GLN CA C sing N N 93 GLN CA CB sing N N 94 GLN CA HA sing N N 95 GLN C O doub N N 96 GLN C OXT sing N N 97 GLN CB CG sing N N 98 GLN CB HB2 sing N N 99 GLN CB HB3 sing N N 100 GLN CG CD sing N N 101 GLN CG HG2 sing N N 102 GLN CG HG3 sing N N 103 GLN CD OE1 doub N N 104 GLN CD NE2 sing N N 105 GLN NE2 HE21 sing N N 106 GLN NE2 HE22 sing N N 107 GLN OXT HXT sing N N 108 GLU N CA sing N N 109 GLU N H sing N N 110 GLU N H2 sing N N 111 GLU CA C sing N N 112 GLU CA CB sing N N 113 GLU CA HA sing N N 114 GLU C O doub N N 115 GLU C OXT sing N N 116 GLU CB CG sing N N 117 GLU CB HB2 sing N N 118 GLU CB HB3 sing N N 119 GLU CG CD sing N N 120 GLU CG HG2 sing N N 121 GLU CG HG3 sing N N 122 GLU CD OE1 doub N N 123 GLU CD OE2 sing N N 124 GLU OE2 HE2 sing N N 125 GLU OXT HXT sing N N 126 GLY N CA sing N N 127 GLY N H sing N N 128 GLY N H2 sing N N 129 GLY CA C sing N N 130 GLY CA HA2 sing N N 131 GLY CA HA3 sing N N 132 GLY C O doub N N 133 GLY C OXT sing N N 134 GLY OXT HXT sing N N 135 HIS N CA sing N N 136 HIS N H sing N N 137 HIS N H2 sing N N 138 HIS CA C sing N N 139 HIS CA CB sing N N 140 HIS CA HA sing N N 141 HIS C O doub N N 142 HIS C OXT sing N N 143 HIS CB CG sing N N 144 HIS CB HB2 sing N N 145 HIS CB HB3 sing N N 146 HIS CG ND1 sing Y N 147 HIS CG CD2 doub Y N 148 HIS ND1 CE1 doub Y N 149 HIS ND1 HD1 sing N N 150 HIS CD2 NE2 sing Y N 151 HIS CD2 HD2 sing N N 152 HIS CE1 NE2 sing Y N 153 HIS CE1 HE1 sing N N 154 HIS NE2 HE2 sing N N 155 HIS OXT HXT sing N N 156 HOH O H1 sing N N 157 HOH O H2 sing N N 158 ILE N CA sing N N 159 ILE N H sing N N 160 ILE N H2 sing N N 161 ILE CA C sing N N 162 ILE CA CB sing N N 163 ILE CA HA sing N N 164 ILE C O doub N N 165 ILE C OXT sing N N 166 ILE CB CG1 sing N N 167 ILE CB CG2 sing N N 168 ILE CB HB sing N N 169 ILE CG1 CD1 sing N N 170 ILE CG1 HG12 sing N N 171 ILE CG1 HG13 sing N N 172 ILE CG2 HG21 sing N N 173 ILE CG2 HG22 sing N N 174 ILE CG2 HG23 sing N N 175 ILE CD1 HD11 sing N N 176 ILE CD1 HD12 sing N N 177 ILE CD1 HD13 sing N N 178 ILE OXT HXT sing N N 179 LEU N CA sing N N 180 LEU N H sing N N 181 LEU N H2 sing N N 182 LEU CA C sing N N 183 LEU CA CB sing N N 184 LEU CA HA sing N N 185 LEU C O doub N N 186 LEU C OXT sing N N 187 LEU CB CG sing N N 188 LEU CB HB2 sing N N 189 LEU CB HB3 sing N N 190 LEU CG CD1 sing N N 191 LEU CG CD2 sing N N 192 LEU CG HG sing N N 193 LEU CD1 HD11 sing N N 194 LEU CD1 HD12 sing N N 195 LEU CD1 HD13 sing N N 196 LEU CD2 HD21 sing N N 197 LEU CD2 HD22 sing N N 198 LEU CD2 HD23 sing N N 199 LEU OXT HXT sing N N 200 LYS N CA sing N N 201 LYS N H sing N N 202 LYS N H2 sing N N 203 LYS CA C sing N N 204 LYS CA CB sing N N 205 LYS CA HA sing N N 206 LYS C O doub N N 207 LYS C OXT sing N N 208 LYS CB CG sing N N 209 LYS CB HB2 sing N N 210 LYS CB HB3 sing N N 211 LYS CG CD sing N N 212 LYS CG HG2 sing N N 213 LYS CG HG3 sing N N 214 LYS CD CE sing N N 215 LYS CD HD2 sing N N 216 LYS CD HD3 sing N N 217 LYS CE NZ sing N N 218 LYS CE HE2 sing N N 219 LYS CE HE3 sing N N 220 LYS NZ HZ1 sing N N 221 LYS NZ HZ2 sing N N 222 LYS NZ HZ3 sing N N 223 LYS OXT HXT sing N N 224 MET N CA sing N N 225 MET N H sing N N 226 MET N H2 sing N N 227 MET CA C sing N N 228 MET CA CB sing N N 229 MET CA HA sing N N 230 MET C O doub N N 231 MET C OXT sing N N 232 MET CB CG sing N N 233 MET CB HB2 sing N N 234 MET CB HB3 sing N N 235 MET CG SD sing N N 236 MET CG HG2 sing N N 237 MET CG HG3 sing N N 238 MET SD CE sing N N 239 MET CE HE1 sing N N 240 MET CE HE2 sing N N 241 MET CE HE3 sing N N 242 MET OXT HXT sing N N 243 PHE N CA sing N N 244 PHE N H sing N N 245 PHE N H2 sing N N 246 PHE CA C sing N N 247 PHE CA CB sing N N 248 PHE CA HA sing N N 249 PHE C O doub N N 250 PHE C OXT sing N N 251 PHE CB CG sing N N 252 PHE CB HB2 sing N N 253 PHE CB HB3 sing N N 254 PHE CG CD1 doub Y N 255 PHE CG CD2 sing Y N 256 PHE CD1 CE1 sing Y N 257 PHE CD1 HD1 sing N N 258 PHE CD2 CE2 doub Y N 259 PHE CD2 HD2 sing N N 260 PHE CE1 CZ doub Y N 261 PHE CE1 HE1 sing N N 262 PHE CE2 CZ sing Y N 263 PHE CE2 HE2 sing N N 264 PHE CZ HZ sing N N 265 PHE OXT HXT sing N N 266 PRO N CA sing N N 267 PRO N CD sing N N 268 PRO N H sing N N 269 PRO CA C sing N N 270 PRO CA CB sing N N 271 PRO CA HA sing N N 272 PRO C O doub N N 273 PRO C OXT sing N N 274 PRO CB CG sing N N 275 PRO CB HB2 sing N N 276 PRO CB HB3 sing N N 277 PRO CG CD sing N N 278 PRO CG HG2 sing N N 279 PRO CG HG3 sing N N 280 PRO CD HD2 sing N N 281 PRO CD HD3 sing N N 282 PRO OXT HXT sing N N 283 SER N CA sing N N 284 SER N H sing N N 285 SER N H2 sing N N 286 SER CA C sing N N 287 SER CA CB sing N N 288 SER CA HA sing N N 289 SER C O doub N N 290 SER C OXT sing N N 291 SER CB OG sing N N 292 SER CB HB2 sing N N 293 SER CB HB3 sing N N 294 SER OG HG sing N N 295 SER OXT HXT sing N N 296 THR N CA sing N N 297 THR N H sing N N 298 THR N H2 sing N N 299 THR CA C sing N N 300 THR CA CB sing N N 301 THR CA HA sing N N 302 THR C O doub N N 303 THR C OXT sing N N 304 THR CB OG1 sing N N 305 THR CB CG2 sing N N 306 THR CB HB sing N N 307 THR OG1 HG1 sing N N 308 THR CG2 HG21 sing N N 309 THR CG2 HG22 sing N N 310 THR CG2 HG23 sing N N 311 THR OXT HXT sing N N 312 TYR N CA sing N N 313 TYR N H sing N N 314 TYR N H2 sing N N 315 TYR CA C sing N N 316 TYR CA CB sing N N 317 TYR CA HA sing N N 318 TYR C O doub N N 319 TYR C OXT sing N N 320 TYR CB CG sing N N 321 TYR CB HB2 sing N N 322 TYR CB HB3 sing N N 323 TYR CG CD1 doub Y N 324 TYR CG CD2 sing Y N 325 TYR CD1 CE1 sing Y N 326 TYR CD1 HD1 sing N N 327 TYR CD2 CE2 doub Y N 328 TYR CD2 HD2 sing N N 329 TYR CE1 CZ doub Y N 330 TYR CE1 HE1 sing N N 331 TYR CE2 CZ sing Y N 332 TYR CE2 HE2 sing N N 333 TYR CZ OH sing N N 334 TYR OH HH sing N N 335 TYR OXT HXT sing N N 336 VAL N CA sing N N 337 VAL N H sing N N 338 VAL N H2 sing N N 339 VAL CA C sing N N 340 VAL CA CB sing N N 341 VAL CA HA sing N N 342 VAL C O doub N N 343 VAL C OXT sing N N 344 VAL CB CG1 sing N N 345 VAL CB CG2 sing N N 346 VAL CB HB sing N N 347 VAL CG1 HG11 sing N N 348 VAL CG1 HG12 sing N N 349 VAL CG1 HG13 sing N N 350 VAL CG2 HG21 sing N N 351 VAL CG2 HG22 sing N N 352 VAL CG2 HG23 sing N N 353 VAL OXT HXT sing N N 354 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CITRIC ACID' CIT 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3R68 _pdbx_initial_refinement_model.details 'PDB ENTRY 3R68' #