HEADER OXIDOREDUCTASE 25-MAR-11 3R98 TITLE JOINT NEUTRON AND X-RAY STRUCTURE OF CYTOCHROME C PEROXIDASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME C PEROXIDASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CCP; COMPND 5 EC: 1.11.1.5; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: CCP1, CCP, CPO, YKR066C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS OXIDOREDUCTASE EXPDTA NEUTRON DIFFRACTION; X-RAY DIFFRACTION AUTHOR M.P.BLAKELEY,S.J.FISHER,A.GUMIERO,P.C.E.MOODY,E.L.RAVEN REVDAT 4 20-MAR-24 3R98 1 REMARK LINK REVDAT 3 16-MAY-18 3R98 1 REMARK REVDAT 2 07-MAR-18 3R98 1 REMARK REVDAT 1 04-APR-12 3R98 0 JRNL AUTH A.GUMIERO,M.P.BLAKELEY,C.L.METCALFE,E.J.MURPHY,E.L.RAVEN, JRNL AUTH 2 P.C.E.MOODY JRNL TITL HYDROGEN BONDS IN HEME PEROXIDASES: A COMBINED X-RAY AND JRNL TITL 2 NEUTRON STUDY OF CYTOCHROME C PEROXIDASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 NEUTRON DATA. REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 53.54 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 75.0 REMARK 3 NUMBER OF REFLECTIONS : 12900 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1290 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 53.5523 - 4.9911 0.93 1727 191 0.1932 0.2309 REMARK 3 2 4.9911 - 3.9619 0.93 1611 181 0.1684 0.2040 REMARK 3 3 3.9619 - 3.4612 0.91 1569 174 0.1730 0.2139 REMARK 3 4 3.4612 - 3.1448 0.80 1381 152 0.1869 0.2543 REMARK 3 5 3.1448 - 2.9194 0.72 1241 137 0.2170 0.2400 REMARK 3 6 2.9194 - 2.7473 0.67 1120 125 0.2310 0.3010 REMARK 3 7 2.7473 - 2.6097 0.62 1052 118 0.2543 0.3008 REMARK 3 8 2.6097 - 2.4961 0.59 990 110 0.2830 0.3263 REMARK 3 9 2.4961 - 2.4000 0.55 919 102 0.3160 0.3687 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.77 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 21.18 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.96 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -6.13430 REMARK 3 B22 (A**2) : -1.78940 REMARK 3 B33 (A**2) : -11.97740 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 5617 REMARK 3 ANGLE : 1.651 9671 REMARK 3 CHIRALITY : 0.175 332 REMARK 3 PLANARITY : 0.007 1077 REMARK 3 DIHEDRAL : 20.142 1496 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 3 X-RAY DATA. REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.9 REMARK 3 NUMBER OF REFLECTIONS : 22900 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.010 REMARK 3 FREE R VALUE TEST SET COUNT : 2292 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.9025 - 4.5229 0.98 2400 270 0.1531 0.1726 REMARK 3 2 4.5229 - 3.5904 0.98 2295 254 0.1308 0.1524 REMARK 3 3 3.5904 - 3.1367 0.97 2242 248 0.1681 0.2192 REMARK 3 4 3.1367 - 2.8500 0.95 2162 240 0.1778 0.2025 REMARK 3 5 2.8500 - 2.6458 0.87 1982 222 0.1785 0.2345 REMARK 3 6 2.6458 - 2.4898 0.85 1915 213 0.1878 0.2425 REMARK 3 7 2.4898 - 2.3651 0.84 1910 211 0.1831 0.2370 REMARK 3 8 2.3651 - 2.2622 0.85 1908 212 0.1845 0.2329 REMARK 3 9 2.2622 - 2.1751 0.84 1895 211 0.2143 0.2994 REMARK 3 10 2.1751 - 2.1000 0.84 1899 211 0.2505 0.3138 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.65 REMARK 3 K_SOL : 0.39 REMARK 3 B_SOL : 40.00 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.720 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.20070 REMARK 3 B22 (A**2) : 5.25360 REMARK 3 B33 (A**2) : -9.89850 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3R98 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-APR-11. REMARK 100 THE DEPOSITION ID IS D_1000064648. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : XENOCS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : LAUEGEN REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22900 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 43.893 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 230 REMARK 230 EXPERIMENTAL DETAILS REMARK 230 EXPERIMENT TYPE : NEUTRON DIFFRACTION REMARK 230 DATE OF DATA COLLECTION : 23-JUN-09 REMARK 230 TEMPERATURE (KELVIN) : 298.0 REMARK 230 PH : 6.00 REMARK 230 NUMBER OF CRYSTALS USED : 1 REMARK 230 REMARK 230 NEUTRON SOURCE : NUCLEAR REACTOR REMARK 230 BEAMLINE : LADI III REMARK 230 WAVELENGTH OR RANGE (A) : 3.2-4.2 REMARK 230 MONOCHROMATOR : MULTILAYER NI-TI REMARK 230 OPTICS : NULL REMARK 230 REMARK 230 DETECTOR TYPE : IMAGE PLATE REMARK 230 DETECTOR MANUFACTURER : NULL REMARK 230 INTENSITY-INTEGRATION SOFTWARE : LAUEGEN REMARK 230 DATA SCALING SOFTWARE : SCALA REMARK 230 REMARK 230 NUMBER OF UNIQUE REFLECTIONS : 12900 REMARK 230 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 230 RESOLUTION RANGE LOW (A) : 53.550 REMARK 230 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 230 REMARK 230 OVERALL. REMARK 230 COMPLETENESS FOR RANGE (%) : 76.3 REMARK 230 DATA REDUNDANCY : 4.600 REMARK 230 R MERGE (I) : 0.16800 REMARK 230 R SYM (I) : NULL REMARK 230 FOR THE DATA SET : 7.8000 REMARK 230 REMARK 230 IN THE HIGHEST RESOLUTION SHELL. REMARK 230 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 230 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.53 REMARK 230 COMPLETENESS FOR SHELL (%) : 56.6 REMARK 230 DATA REDUNDANCY IN SHELL : 2.50 REMARK 230 R MERGE FOR SHELL (I) : 0.19400 REMARK 230 R SYM FOR SHELL (I) : NULL REMARK 230 FOR SHELL : 5.000 REMARK 230 REMARK 230 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 230 SOFTWARE USED : PHENIX REMARK 230 STARTING MODEL: NULL REMARK 230 REMARK 230 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50MM POTASSIUM PHOSPHATE, 30% MPD, PH REMARK 280 6.0(IN D2O), MICRODIALYSIS, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.77350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.53900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.32750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.53900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.77350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.32750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 D1 DOD A 350 D1 DOD A 395 1.20 REMARK 500 O DOD A 445 D2 DOD A 452 1.34 REMARK 500 ND1 HIS A 96 D1 DOD A 372 1.34 REMARK 500 O ARG A 155 D2 DOD A 324 1.45 REMARK 500 O GLN A 117 D1 DOD A 415 1.47 REMARK 500 OXT LEU A 294 D1 DOD A 321 1.52 REMARK 500 OE2 GLU A 201 D2 DOD A 431 1.56 REMARK 500 OD2 ASP A 224 D1 DOD A 453 1.57 REMARK 500 D1 DOD A 296 O DOD A 330 1.57 REMARK 500 HD1 HIS A 181 O1A HEM A 1 1.57 REMARK 500 DD1 HIS A 181 O1A HEM A 1 1.57 REMARK 500 OH TYR A 153 O DOD A 390 2.04 REMARK 500 NH1 ARG A 48 O DOD A 378 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 277 155.96 -48.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 1 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 175 NE2 REMARK 620 2 HEM A 1 NA 97.4 REMARK 620 3 HEM A 1 NB 106.5 88.4 REMARK 620 4 HEM A 1 NC 95.1 163.7 98.1 REMARK 620 5 HEM A 1 ND 91.6 86.1 161.6 83.1 REMARK 620 6 DOD A 361 O 167.4 74.0 82.7 92.0 78.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2XJ8 RELATED DB: PDB REMARK 900 RELATED ID: 2YCG RELATED DB: PDB REMARK 900 RELATED ID: 3R99 RELATED DB: PDB DBREF 3R98 A 2 294 UNP P00431 CCPR_YEAST 69 361 SEQRES 1 A 293 THR PRO LEU VAL HIS VAL ALA SER VAL GLU LYS GLY ARG SEQRES 2 A 293 SER TYR GLU ASP PHE GLN LYS VAL TYR ASN ALA ILE ALA SEQRES 3 A 293 LEU LYS LEU ARG GLU ASP ASP GLU TYR ASP ASN TYR ILE SEQRES 4 A 293 GLY TYR GLY PRO VAL LEU VAL ARG LEU ALA TRP HIS THR SEQRES 5 A 293 SER GLY THR TRP ASP LYS HIS ASP ASN THR GLY GLY SER SEQRES 6 A 293 TYR GLY GLY THR TYR ARG PHE LYS LYS GLU PHE ASN ASP SEQRES 7 A 293 PRO SER ASN ALA GLY LEU GLN ASN GLY PHE LYS PHE LEU SEQRES 8 A 293 GLU PRO ILE HIS LYS GLU PHE PRO TRP ILE SER SER GLY SEQRES 9 A 293 ASP LEU PHE SER LEU GLY GLY VAL THR ALA VAL GLN GLU SEQRES 10 A 293 MET GLN GLY PRO LYS ILE PRO TRP ARG CYS GLY ARG VAL SEQRES 11 A 293 ASP THR PRO GLU ASP THR THR PRO ASP ASN GLY ARG LEU SEQRES 12 A 293 PRO ASP ALA ASP LYS ASP ALA ASP TYR VAL ARG THR PHE SEQRES 13 A 293 PHE GLN ARG LEU ASN MET ASN ASP ARG GLU VAL VAL ALA SEQRES 14 A 293 LEU MET GLY ALA HIS ALA LEU GLY LYS THR HIS LEU LYS SEQRES 15 A 293 ASN SER GLY TYR GLU GLY PRO TRP GLY ALA ALA ASN ASN SEQRES 16 A 293 VAL PHE THR ASN GLU PHE TYR LEU ASN LEU LEU ASN GLU SEQRES 17 A 293 ASP TRP LYS LEU GLU LYS ASN ASP ALA ASN ASN GLU GLN SEQRES 18 A 293 TRP ASP SER LYS SER GLY TYR MET MET LEU PRO THR ASP SEQRES 19 A 293 TYR SER LEU ILE GLN ASP PRO LYS TYR LEU SER ILE VAL SEQRES 20 A 293 LYS GLU TYR ALA ASN ASP GLN ASP LYS PHE PHE LYS ASP SEQRES 21 A 293 PHE SER LYS ALA PHE GLU LYS LEU LEU GLU ASN GLY ILE SEQRES 22 A 293 THR PHE PRO LYS ASP ALA PRO SER PRO PHE ILE PHE LYS SEQRES 23 A 293 THR LEU GLU GLU GLN GLY LEU HET HEM A 1 73 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETSYN HEM HEME FORMUL 2 HEM C34 H32 FE N4 O4 FORMUL 3 DOD *174(D2 O) HELIX 1 1 SER A 15 ASP A 33 1 19 HELIX 2 2 GLU A 35 ILE A 40 1 6 HELIX 3 3 TYR A 42 GLY A 55 1 14 HELIX 4 4 GLY A 69 ARG A 72 5 4 HELIX 5 5 PHE A 73 ASN A 78 1 6 HELIX 6 6 ASP A 79 GLY A 84 5 6 HELIX 7 7 LEU A 85 PHE A 99 1 15 HELIX 8 8 SER A 103 MET A 119 1 17 HELIX 9 9 PRO A 134 THR A 138 5 5 HELIX 10 10 ASP A 150 ARG A 160 1 11 HELIX 11 11 ASN A 164 GLY A 173 1 10 HELIX 12 12 ALA A 174 LEU A 177 5 4 HELIX 13 13 HIS A 181 GLY A 186 1 6 HELIX 14 14 ASN A 200 GLU A 209 1 10 HELIX 15 15 LEU A 232 SER A 237 1 6 HELIX 16 16 ASP A 241 ASN A 253 1 13 HELIX 17 17 ASP A 254 ASN A 272 1 19 HELIX 18 18 THR A 288 GLY A 293 1 6 SHEET 1 A 2 LYS A 179 THR A 180 0 SHEET 2 A 2 GLY A 189 PRO A 190 -1 O GLY A 189 N THR A 180 SHEET 1 B 3 TRP A 211 LYS A 215 0 SHEET 2 B 3 GLU A 221 SER A 225 -1 O GLN A 222 N GLU A 214 SHEET 3 B 3 MET A 230 MET A 231 -1 O MET A 231 N TRP A 223 LINK FE HEM A 1 NE2 HIS A 175 1555 1555 1.97 LINK FE HEM A 1 O DOD A 361 1555 1555 2.76 SITE 1 AC1 18 PRO A 44 ARG A 48 TRP A 51 PRO A 145 SITE 2 AC1 18 ALA A 174 HIS A 175 LEU A 177 GLY A 178 SITE 3 AC1 18 LYS A 179 THR A 180 HIS A 181 ASN A 184 SITE 4 AC1 18 SER A 185 TRP A 191 LEU A 232 THR A 234 SITE 5 AC1 18 DOD A 308 DOD A 361 CRYST1 51.547 76.655 107.078 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019400 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013045 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009339 0.00000