HEADER CELL CYCLE,HYDROLASE/CELL CYCLE 25-MAR-11 3R9I TITLE 2.6A RESOLUTION STRUCTURE OF MIND COMPLEXED WITH MINE (12-31) PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SEPTUM SITE-DETERMINING PROTEIN MIND; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: CELL DIVISION INHIBITOR MIND; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: CELL DIVISION TOPOLOGICAL SPECIFICITY FACTOR; COMPND 9 CHAIN: E, F, G, H; COMPND 10 FRAGMENT: UNP RESIDUES 12-31; COMPND 11 SYNONYM: MINE; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: B1175, JW1164, MIND; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 12 ORGANISM_TAXID: 83333 KEYWDS ATPASE, BACTERIAL CELL DIVISION INHIBITOR, MINE, CELL CYCLE, KEYWDS 2 HYDROLASE-CELL CYCLE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.LOVELL,K.P.BATTAILE,K.-T.PARK,W.WU,T.HOLYOAK,J.LUTKENHAUS REVDAT 2 13-SEP-23 3R9I 1 REMARK SEQADV REVDAT 1 17-AUG-11 3R9I 0 JRNL AUTH K.T.PARK,W.WU,K.P.BATTAILE,S.LOVELL,T.HOLYOAK,J.LUTKENHAUS JRNL TITL THE MIN OSCILLATOR USES MIND-DEPENDENT CONFORMATIONAL JRNL TITL 2 CHANGES IN MINE TO SPATIALLY REGULATE CYTOKINESIS. JRNL REF CELL(CAMBRIDGE,MASS.) V. 146 396 2011 JRNL REFN ISSN 0092-8674 JRNL PMID 21816275 JRNL DOI 10.1016/J.CELL.2011.06.042 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_661 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.42 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.980 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 36875 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1852 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.4230 - 6.1084 0.98 2653 174 0.1848 0.2127 REMARK 3 2 6.1084 - 4.8505 0.99 2708 148 0.1913 0.2327 REMARK 3 3 4.8505 - 4.2379 0.99 2693 138 0.1492 0.1607 REMARK 3 4 4.2379 - 3.8507 0.99 2731 121 0.1640 0.2014 REMARK 3 5 3.8507 - 3.5749 0.99 2666 171 0.1938 0.2280 REMARK 3 6 3.5749 - 3.3642 0.99 2730 127 0.2178 0.2818 REMARK 3 7 3.3642 - 3.1957 0.99 2653 142 0.2253 0.2820 REMARK 3 8 3.1957 - 3.0567 0.98 2688 138 0.2168 0.2988 REMARK 3 9 3.0567 - 2.9390 0.98 2713 136 0.2222 0.2691 REMARK 3 10 2.9390 - 2.8376 0.98 2690 139 0.2196 0.3073 REMARK 3 11 2.8376 - 2.7489 0.98 2676 148 0.2424 0.2569 REMARK 3 12 2.7489 - 2.6703 0.98 2691 139 0.2607 0.3044 REMARK 3 13 2.6703 - 2.6001 0.98 2731 131 0.2677 0.3011 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.77 REMARK 3 K_SOL : 0.43 REMARK 3 B_SOL : 20.39 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.970 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.35290 REMARK 3 B22 (A**2) : 2.26760 REMARK 3 B33 (A**2) : -7.62060 REMARK 3 B12 (A**2) : -6.56110 REMARK 3 B13 (A**2) : -0.82530 REMARK 3 B23 (A**2) : -0.83670 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 8372 REMARK 3 ANGLE : 1.356 11333 REMARK 3 CHIRALITY : 0.067 1368 REMARK 3 PLANARITY : 0.004 1455 REMARK 3 DIHEDRAL : 16.959 3161 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 2:258 ) AND (NOT REMARK 3 ELEMENT H) AND (NOT ELEMENT D) REMARK 3 SELECTION : CHAIN B AND (RESSEQ 2:258 ) AND (NOT REMARK 3 ELEMENT H) AND (NOT ELEMENT D) REMARK 3 ATOM PAIRS NUMBER : 1913 REMARK 3 RMSD : 0.072 REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 2:258 ) AND (NOT REMARK 3 ELEMENT H) AND (NOT ELEMENT D) REMARK 3 SELECTION : CHAIN C AND (RESSEQ 2:258 ) AND (NOT REMARK 3 ELEMENT H) AND (NOT ELEMENT D) REMARK 3 ATOM PAIRS NUMBER : 1914 REMARK 3 RMSD : 0.068 REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 2:258 ) AND (NOT REMARK 3 ELEMENT H) AND (NOT ELEMENT D) REMARK 3 SELECTION : CHAIN D AND (RESSEQ 2:258 ) AND (NOT REMARK 3 ELEMENT H) AND (NOT ELEMENT D) REMARK 3 ATOM PAIRS NUMBER : 1948 REMARK 3 RMSD : 0.049 REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN E AND (RESSEQ 13:26 ) AND (NOT REMARK 3 ELEMENT H) AND (NOT ELEMENT D) REMARK 3 SELECTION : CHAIN F AND (RESSEQ 13:26 ) AND (NOT REMARK 3 ELEMENT H) AND (NOT ELEMENT D) REMARK 3 ATOM PAIRS NUMBER : 110 REMARK 3 RMSD : 0.073 REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN E AND (RESSEQ 13:26 ) AND (NOT REMARK 3 ELEMENT H) AND (NOT ELEMENT D) REMARK 3 SELECTION : CHAIN G AND (RESSEQ 13:26 ) AND (NOT REMARK 3 ELEMENT H) AND (NOT ELEMENT D) REMARK 3 ATOM PAIRS NUMBER : 103 REMARK 3 RMSD : 0.071 REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: CHAIN E AND (RESSEQ 13:26 ) AND (NOT REMARK 3 ELEMENT H) AND (NOT ELEMENT D) REMARK 3 SELECTION : CHAIN H AND (RESSEQ 13:26 ) AND (NOT REMARK 3 ELEMENT H) AND (NOT ELEMENT D) REMARK 3 ATOM PAIRS NUMBER : 110 REMARK 3 RMSD : 0.049 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3R9I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-MAR-11. REMARK 100 THE DEPOSITION ID IS D_1000064658. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : SCALA CCP4_3.3.16, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36883 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 73.240 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.15300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.1490 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.47 REMARK 200 R MERGE FOR SHELL (I) : 0.57000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.370 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3Q9L REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% W/V PEG3350, 100 MM CITRATE, 200 REMARK 280 MM SODIUM CITRATE, PH 4.0, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 259 REMARK 465 LYS A 260 REMARK 465 MET B 1 REMARK 465 ASP B 93 REMARK 465 LYS B 94 REMARK 465 ASP B 95 REMARK 465 GLU B 259 REMARK 465 LYS B 260 REMARK 465 MET C 1 REMARK 465 ASP C 93 REMARK 465 LYS C 94 REMARK 465 ASP C 95 REMARK 465 GLU C 259 REMARK 465 LYS C 260 REMARK 465 MET D 1 REMARK 465 GLU D 259 REMARK 465 LYS D 260 REMARK 465 LYS E 12 REMARK 465 ALA E 27 REMARK 465 GLU E 28 REMARK 465 ARG E 29 REMARK 465 ARG E 30 REMARK 465 ARG E 31 REMARK 465 LYS F 12 REMARK 465 ALA F 27 REMARK 465 GLU F 28 REMARK 465 ARG F 29 REMARK 465 ARG F 30 REMARK 465 ARG F 31 REMARK 465 LYS G 12 REMARK 465 VAL G 26 REMARK 465 ALA G 27 REMARK 465 GLU G 28 REMARK 465 ARG G 29 REMARK 465 ARG G 30 REMARK 465 ARG G 31 REMARK 465 LYS H 12 REMARK 465 ALA H 27 REMARK 465 GLU H 28 REMARK 465 ARG H 29 REMARK 465 ARG H 30 REMARK 465 ARG H 31 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 79 CD NE CZ NH1 NH2 REMARK 470 LYS A 94 CG CD CE NZ REMARK 470 GLU A 126 CG CD OE1 OE2 REMARK 470 LYS A 206 CG CD CE NZ REMARK 470 ARG B 92 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 175 CG CD CE NZ REMARK 470 GLU B 201 CG CD OE1 OE2 REMARK 470 GLU B 250 CG CD OE1 OE2 REMARK 470 LYS C 78 CD CE NZ REMARK 470 ARG C 79 CD NE CZ NH1 NH2 REMARK 470 ARG C 92 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 126 CG CD OE1 OE2 REMARK 470 GLU C 201 CG CD OE1 OE2 REMARK 470 GLU C 250 CG CD OE1 OE2 REMARK 470 LYS D 94 CG CD CE NZ REMARK 470 GLU D 126 CG CD OE1 OE2 REMARK 470 GLU D 201 CG CD OE1 OE2 REMARK 470 LYS D 206 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 ND2 ASN B 232 O GLN C 29 1655 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 9 -35.07 -177.42 REMARK 500 ASN A 82 7.50 82.00 REMARK 500 ALA A 96 -52.65 -25.48 REMARK 500 GLU A 126 -117.57 -76.34 REMARK 500 SER B 9 -31.32 -173.42 REMARK 500 ASN B 82 3.31 83.34 REMARK 500 GLU B 126 -121.06 -81.25 REMARK 500 SER C 9 -32.74 -176.23 REMARK 500 ASN C 82 3.17 80.46 REMARK 500 ASP C 113 30.04 73.08 REMARK 500 GLU C 126 -121.30 -82.47 REMARK 500 SER D 9 -34.21 -176.01 REMARK 500 ALA D 96 -54.51 -23.84 REMARK 500 GLU D 126 -117.42 -77.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 261 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP B 261 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP C 261 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP D 261 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3Q9L RELATED DB: PDB REMARK 900 MIND-ATP COMPLEX REMARK 900 RELATED ID: 3R9J RELATED DB: PDB DBREF 3R9I A 1 260 UNP P0AEZ3 MIND_ECOLI 1 260 DBREF 3R9I B 1 260 UNP P0AEZ3 MIND_ECOLI 1 260 DBREF 3R9I C 1 260 UNP P0AEZ3 MIND_ECOLI 1 260 DBREF 3R9I D 1 260 UNP P0AEZ3 MIND_ECOLI 1 260 DBREF 3R9I E 12 31 UNP P0A734 MINE_ECOLI 12 31 DBREF 3R9I F 12 31 UNP P0A734 MINE_ECOLI 12 31 DBREF 3R9I G 12 31 UNP P0A734 MINE_ECOLI 12 31 DBREF 3R9I H 12 31 UNP P0A734 MINE_ECOLI 12 31 SEQADV 3R9I ALA A 40 UNP P0AEZ3 ASP 40 ENGINEERED MUTATION SEQADV 3R9I ALA B 40 UNP P0AEZ3 ASP 40 ENGINEERED MUTATION SEQADV 3R9I ALA C 40 UNP P0AEZ3 ASP 40 ENGINEERED MUTATION SEQADV 3R9I ALA D 40 UNP P0AEZ3 ASP 40 ENGINEERED MUTATION SEQRES 1 A 260 MET ALA ARG ILE ILE VAL VAL THR SER GLY LYS GLY GLY SEQRES 2 A 260 VAL GLY LYS THR THR SER SER ALA ALA ILE ALA THR GLY SEQRES 3 A 260 LEU ALA GLN LYS GLY LYS LYS THR VAL VAL ILE ASP PHE SEQRES 4 A 260 ALA ILE GLY LEU ARG ASN LEU ASP LEU ILE MET GLY CYS SEQRES 5 A 260 GLU ARG ARG VAL VAL TYR ASP PHE VAL ASN VAL ILE GLN SEQRES 6 A 260 GLY ASP ALA THR LEU ASN GLN ALA LEU ILE LYS ASP LYS SEQRES 7 A 260 ARG THR GLU ASN LEU TYR ILE LEU PRO ALA SER GLN THR SEQRES 8 A 260 ARG ASP LYS ASP ALA LEU THR ARG GLU GLY VAL ALA LYS SEQRES 9 A 260 VAL LEU ASP ASP LEU LYS ALA MET ASP PHE GLU PHE ILE SEQRES 10 A 260 VAL CYS ASP SER PRO ALA GLY ILE GLU THR GLY ALA LEU SEQRES 11 A 260 MET ALA LEU TYR PHE ALA ASP GLU ALA ILE ILE THR THR SEQRES 12 A 260 ASN PRO GLU VAL SER SER VAL ARG ASP SER ASP ARG ILE SEQRES 13 A 260 LEU GLY ILE LEU ALA SER LYS SER ARG ARG ALA GLU ASN SEQRES 14 A 260 GLY GLU GLU PRO ILE LYS GLU HIS LEU LEU LEU THR ARG SEQRES 15 A 260 TYR ASN PRO GLY ARG VAL SER ARG GLY ASP MET LEU SER SEQRES 16 A 260 MET GLU ASP VAL LEU GLU ILE LEU ARG ILE LYS LEU VAL SEQRES 17 A 260 GLY VAL ILE PRO GLU ASP GLN SER VAL LEU ARG ALA SER SEQRES 18 A 260 ASN GLN GLY GLU PRO VAL ILE LEU ASP ILE ASN ALA ASP SEQRES 19 A 260 ALA GLY LYS ALA TYR ALA ASP THR VAL GLU ARG LEU LEU SEQRES 20 A 260 GLY GLU GLU ARG PRO PHE ARG PHE ILE GLU GLU GLU LYS SEQRES 1 B 260 MET ALA ARG ILE ILE VAL VAL THR SER GLY LYS GLY GLY SEQRES 2 B 260 VAL GLY LYS THR THR SER SER ALA ALA ILE ALA THR GLY SEQRES 3 B 260 LEU ALA GLN LYS GLY LYS LYS THR VAL VAL ILE ASP PHE SEQRES 4 B 260 ALA ILE GLY LEU ARG ASN LEU ASP LEU ILE MET GLY CYS SEQRES 5 B 260 GLU ARG ARG VAL VAL TYR ASP PHE VAL ASN VAL ILE GLN SEQRES 6 B 260 GLY ASP ALA THR LEU ASN GLN ALA LEU ILE LYS ASP LYS SEQRES 7 B 260 ARG THR GLU ASN LEU TYR ILE LEU PRO ALA SER GLN THR SEQRES 8 B 260 ARG ASP LYS ASP ALA LEU THR ARG GLU GLY VAL ALA LYS SEQRES 9 B 260 VAL LEU ASP ASP LEU LYS ALA MET ASP PHE GLU PHE ILE SEQRES 10 B 260 VAL CYS ASP SER PRO ALA GLY ILE GLU THR GLY ALA LEU SEQRES 11 B 260 MET ALA LEU TYR PHE ALA ASP GLU ALA ILE ILE THR THR SEQRES 12 B 260 ASN PRO GLU VAL SER SER VAL ARG ASP SER ASP ARG ILE SEQRES 13 B 260 LEU GLY ILE LEU ALA SER LYS SER ARG ARG ALA GLU ASN SEQRES 14 B 260 GLY GLU GLU PRO ILE LYS GLU HIS LEU LEU LEU THR ARG SEQRES 15 B 260 TYR ASN PRO GLY ARG VAL SER ARG GLY ASP MET LEU SER SEQRES 16 B 260 MET GLU ASP VAL LEU GLU ILE LEU ARG ILE LYS LEU VAL SEQRES 17 B 260 GLY VAL ILE PRO GLU ASP GLN SER VAL LEU ARG ALA SER SEQRES 18 B 260 ASN GLN GLY GLU PRO VAL ILE LEU ASP ILE ASN ALA ASP SEQRES 19 B 260 ALA GLY LYS ALA TYR ALA ASP THR VAL GLU ARG LEU LEU SEQRES 20 B 260 GLY GLU GLU ARG PRO PHE ARG PHE ILE GLU GLU GLU LYS SEQRES 1 C 260 MET ALA ARG ILE ILE VAL VAL THR SER GLY LYS GLY GLY SEQRES 2 C 260 VAL GLY LYS THR THR SER SER ALA ALA ILE ALA THR GLY SEQRES 3 C 260 LEU ALA GLN LYS GLY LYS LYS THR VAL VAL ILE ASP PHE SEQRES 4 C 260 ALA ILE GLY LEU ARG ASN LEU ASP LEU ILE MET GLY CYS SEQRES 5 C 260 GLU ARG ARG VAL VAL TYR ASP PHE VAL ASN VAL ILE GLN SEQRES 6 C 260 GLY ASP ALA THR LEU ASN GLN ALA LEU ILE LYS ASP LYS SEQRES 7 C 260 ARG THR GLU ASN LEU TYR ILE LEU PRO ALA SER GLN THR SEQRES 8 C 260 ARG ASP LYS ASP ALA LEU THR ARG GLU GLY VAL ALA LYS SEQRES 9 C 260 VAL LEU ASP ASP LEU LYS ALA MET ASP PHE GLU PHE ILE SEQRES 10 C 260 VAL CYS ASP SER PRO ALA GLY ILE GLU THR GLY ALA LEU SEQRES 11 C 260 MET ALA LEU TYR PHE ALA ASP GLU ALA ILE ILE THR THR SEQRES 12 C 260 ASN PRO GLU VAL SER SER VAL ARG ASP SER ASP ARG ILE SEQRES 13 C 260 LEU GLY ILE LEU ALA SER LYS SER ARG ARG ALA GLU ASN SEQRES 14 C 260 GLY GLU GLU PRO ILE LYS GLU HIS LEU LEU LEU THR ARG SEQRES 15 C 260 TYR ASN PRO GLY ARG VAL SER ARG GLY ASP MET LEU SER SEQRES 16 C 260 MET GLU ASP VAL LEU GLU ILE LEU ARG ILE LYS LEU VAL SEQRES 17 C 260 GLY VAL ILE PRO GLU ASP GLN SER VAL LEU ARG ALA SER SEQRES 18 C 260 ASN GLN GLY GLU PRO VAL ILE LEU ASP ILE ASN ALA ASP SEQRES 19 C 260 ALA GLY LYS ALA TYR ALA ASP THR VAL GLU ARG LEU LEU SEQRES 20 C 260 GLY GLU GLU ARG PRO PHE ARG PHE ILE GLU GLU GLU LYS SEQRES 1 D 260 MET ALA ARG ILE ILE VAL VAL THR SER GLY LYS GLY GLY SEQRES 2 D 260 VAL GLY LYS THR THR SER SER ALA ALA ILE ALA THR GLY SEQRES 3 D 260 LEU ALA GLN LYS GLY LYS LYS THR VAL VAL ILE ASP PHE SEQRES 4 D 260 ALA ILE GLY LEU ARG ASN LEU ASP LEU ILE MET GLY CYS SEQRES 5 D 260 GLU ARG ARG VAL VAL TYR ASP PHE VAL ASN VAL ILE GLN SEQRES 6 D 260 GLY ASP ALA THR LEU ASN GLN ALA LEU ILE LYS ASP LYS SEQRES 7 D 260 ARG THR GLU ASN LEU TYR ILE LEU PRO ALA SER GLN THR SEQRES 8 D 260 ARG ASP LYS ASP ALA LEU THR ARG GLU GLY VAL ALA LYS SEQRES 9 D 260 VAL LEU ASP ASP LEU LYS ALA MET ASP PHE GLU PHE ILE SEQRES 10 D 260 VAL CYS ASP SER PRO ALA GLY ILE GLU THR GLY ALA LEU SEQRES 11 D 260 MET ALA LEU TYR PHE ALA ASP GLU ALA ILE ILE THR THR SEQRES 12 D 260 ASN PRO GLU VAL SER SER VAL ARG ASP SER ASP ARG ILE SEQRES 13 D 260 LEU GLY ILE LEU ALA SER LYS SER ARG ARG ALA GLU ASN SEQRES 14 D 260 GLY GLU GLU PRO ILE LYS GLU HIS LEU LEU LEU THR ARG SEQRES 15 D 260 TYR ASN PRO GLY ARG VAL SER ARG GLY ASP MET LEU SER SEQRES 16 D 260 MET GLU ASP VAL LEU GLU ILE LEU ARG ILE LYS LEU VAL SEQRES 17 D 260 GLY VAL ILE PRO GLU ASP GLN SER VAL LEU ARG ALA SER SEQRES 18 D 260 ASN GLN GLY GLU PRO VAL ILE LEU ASP ILE ASN ALA ASP SEQRES 19 D 260 ALA GLY LYS ALA TYR ALA ASP THR VAL GLU ARG LEU LEU SEQRES 20 D 260 GLY GLU GLU ARG PRO PHE ARG PHE ILE GLU GLU GLU LYS SEQRES 1 E 20 LYS ASN THR ALA ASN ILE ALA LYS GLU ARG LEU GLN ILE SEQRES 2 E 20 ILE VAL ALA GLU ARG ARG ARG SEQRES 1 F 20 LYS ASN THR ALA ASN ILE ALA LYS GLU ARG LEU GLN ILE SEQRES 2 F 20 ILE VAL ALA GLU ARG ARG ARG SEQRES 1 G 20 LYS ASN THR ALA ASN ILE ALA LYS GLU ARG LEU GLN ILE SEQRES 2 G 20 ILE VAL ALA GLU ARG ARG ARG SEQRES 1 H 20 LYS ASN THR ALA ASN ILE ALA LYS GLU ARG LEU GLN ILE SEQRES 2 H 20 ILE VAL ALA GLU ARG ARG ARG HET ADP A 261 27 HET ADP B 261 27 HET ADP C 261 27 HET ADP D 261 27 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE FORMUL 9 ADP 4(C10 H15 N5 O10 P2) FORMUL 13 HOH *177(H2 O) HELIX 1 1 GLY A 15 LYS A 30 1 16 HELIX 2 2 ASN A 45 MET A 50 1 6 HELIX 3 3 ASP A 59 GLN A 65 1 7 HELIX 4 4 THR A 69 LEU A 74 1 6 HELIX 5 5 THR A 98 MET A 112 1 15 HELIX 6 6 GLU A 126 TYR A 134 1 9 HELIX 7 7 GLU A 146 ALA A 161 1 16 HELIX 8 8 ARG A 166 GLY A 170 5 5 HELIX 9 9 ASN A 184 ARG A 190 1 7 HELIX 10 10 SER A 195 LEU A 203 1 9 HELIX 11 11 GLN A 215 GLY A 224 1 10 HELIX 12 12 PRO A 226 ASP A 230 5 5 HELIX 13 13 ALA A 233 LEU A 247 1 15 HELIX 14 14 GLY B 15 LYS B 30 1 16 HELIX 15 15 ASN B 45 MET B 50 1 6 HELIX 16 16 ASP B 59 GLN B 65 1 7 HELIX 17 17 THR B 69 LEU B 74 1 6 HELIX 18 18 THR B 98 MET B 112 1 15 HELIX 19 19 GLU B 126 PHE B 135 1 10 HELIX 20 20 GLU B 146 LYS B 163 1 18 HELIX 21 21 ARG B 166 GLY B 170 5 5 HELIX 22 22 ASN B 184 ARG B 190 1 7 HELIX 23 23 SER B 195 LEU B 203 1 9 HELIX 24 24 GLN B 215 GLY B 224 1 10 HELIX 25 25 PRO B 226 ASP B 230 5 5 HELIX 26 26 ALA B 233 LEU B 247 1 15 HELIX 27 27 GLY C 15 LYS C 30 1 16 HELIX 28 28 ASN C 45 MET C 50 1 6 HELIX 29 29 ASP C 59 GLN C 65 1 7 HELIX 30 30 THR C 69 LEU C 74 1 6 HELIX 31 31 THR C 98 MET C 112 1 15 HELIX 32 32 GLU C 126 PHE C 135 1 10 HELIX 33 33 GLU C 146 LYS C 163 1 18 HELIX 34 34 ARG C 166 GLY C 170 5 5 HELIX 35 35 ASN C 184 ARG C 190 1 7 HELIX 36 36 SER C 195 LEU C 203 1 9 HELIX 37 37 GLN C 215 GLY C 224 1 10 HELIX 38 38 PRO C 226 ASP C 230 5 5 HELIX 39 39 ALA C 233 LEU C 247 1 15 HELIX 40 40 GLY D 15 LYS D 30 1 16 HELIX 41 41 ASN D 45 GLY D 51 1 7 HELIX 42 42 ASP D 59 GLN D 65 1 7 HELIX 43 43 THR D 69 LEU D 74 1 6 HELIX 44 44 THR D 98 MET D 112 1 15 HELIX 45 45 GLU D 126 TYR D 134 1 9 HELIX 46 46 GLU D 146 ALA D 161 1 16 HELIX 47 47 ARG D 166 GLY D 170 5 5 HELIX 48 48 ASN D 184 ARG D 190 1 7 HELIX 49 49 SER D 195 LEU D 203 1 9 HELIX 50 50 GLN D 215 GLY D 224 1 10 HELIX 51 51 PRO D 226 ASP D 230 5 5 HELIX 52 52 ALA D 233 LEU D 247 1 15 HELIX 53 53 ASN E 13 VAL E 26 1 14 HELIX 54 54 ASN F 13 VAL F 26 1 14 HELIX 55 55 ASN G 13 ILE G 25 1 13 HELIX 56 56 ASN H 13 VAL H 26 1 14 SHEET 1 A 8 ILE A 75 LYS A 76 0 SHEET 2 A 8 LEU A 83 LEU A 86 -1 O ILE A 85 N ILE A 75 SHEET 3 A 8 THR A 34 ASP A 38 1 N ASP A 38 O LEU A 86 SHEET 4 A 8 PHE A 116 ASP A 120 1 O VAL A 118 N VAL A 35 SHEET 5 A 8 ARG A 3 THR A 8 1 N VAL A 7 O CYS A 119 SHEET 6 A 8 GLU A 138 THR A 143 1 O ILE A 140 N VAL A 6 SHEET 7 A 8 LYS A 175 TYR A 183 1 O THR A 181 N THR A 143 SHEET 8 A 8 LYS A 206 PRO A 212 1 O LYS A 206 N LEU A 178 SHEET 1 B 8 ILE B 75 LYS B 76 0 SHEET 2 B 8 LEU B 83 LEU B 86 -1 O ILE B 85 N ILE B 75 SHEET 3 B 8 THR B 34 ASP B 38 1 N ASP B 38 O LEU B 86 SHEET 4 B 8 PHE B 116 ASP B 120 1 O VAL B 118 N ILE B 37 SHEET 5 B 8 ARG B 3 THR B 8 1 N VAL B 7 O CYS B 119 SHEET 6 B 8 GLU B 138 THR B 143 1 O ILE B 140 N VAL B 6 SHEET 7 B 8 LYS B 175 TYR B 183 1 O THR B 181 N THR B 143 SHEET 8 B 8 LYS B 206 PRO B 212 1 O LYS B 206 N LEU B 178 SHEET 1 C 8 ILE C 75 LYS C 76 0 SHEET 2 C 8 LEU C 83 LEU C 86 -1 O ILE C 85 N ILE C 75 SHEET 3 C 8 THR C 34 ASP C 38 1 N ASP C 38 O LEU C 86 SHEET 4 C 8 PHE C 116 ASP C 120 1 O VAL C 118 N VAL C 35 SHEET 5 C 8 ARG C 3 THR C 8 1 N VAL C 7 O CYS C 119 SHEET 6 C 8 GLU C 138 THR C 143 1 O ILE C 140 N VAL C 6 SHEET 7 C 8 LYS C 175 TYR C 183 1 O THR C 181 N THR C 143 SHEET 8 C 8 LYS C 206 PRO C 212 1 O LYS C 206 N LEU C 178 SHEET 1 D 8 ILE D 75 LYS D 76 0 SHEET 2 D 8 LEU D 83 LEU D 86 -1 O ILE D 85 N ILE D 75 SHEET 3 D 8 THR D 34 ASP D 38 1 N ASP D 38 O LEU D 86 SHEET 4 D 8 PHE D 116 ASP D 120 1 O VAL D 118 N VAL D 35 SHEET 5 D 8 ARG D 3 THR D 8 1 N VAL D 7 O CYS D 119 SHEET 6 D 8 GLU D 138 THR D 143 1 O ILE D 140 N VAL D 6 SHEET 7 D 8 LYS D 175 TYR D 183 1 O THR D 181 N THR D 143 SHEET 8 D 8 LYS D 206 PRO D 212 1 O LYS D 206 N LEU D 178 SITE 1 AC1 17 GLY A 13 VAL A 14 GLY A 15 LYS A 16 SITE 2 AC1 17 THR A 17 THR A 18 ARG A 182 ILE A 211 SITE 3 AC1 17 PRO A 212 GLU A 213 ASP A 214 VAL A 217 SITE 4 AC1 17 HOH A 276 HOH A 301 HOH A 309 HOH A 311 SITE 5 AC1 17 LYS B 11 SITE 1 AC2 16 LYS A 11 GLU A 146 GLY B 13 VAL B 14 SITE 2 AC2 16 GLY B 15 LYS B 16 THR B 17 THR B 18 SITE 3 AC2 16 ARG B 182 PRO B 212 GLU B 213 ASP B 214 SITE 4 AC2 16 VAL B 217 HOH B 283 HOH B 305 HOH B 306 SITE 1 AC3 17 GLY C 13 VAL C 14 GLY C 15 LYS C 16 SITE 2 AC3 17 THR C 17 THR C 18 ARG C 182 ILE C 211 SITE 3 AC3 17 PRO C 212 GLU C 213 ASP C 214 VAL C 217 SITE 4 AC3 17 HOH C 268 HOH C 280 LYS D 11 GLU D 146 SITE 5 AC3 17 HOH D 272 SITE 1 AC4 17 LYS C 11 GLU C 146 GLY D 13 VAL D 14 SITE 2 AC4 17 GLY D 15 LYS D 16 THR D 17 THR D 18 SITE 3 AC4 17 ARG D 182 ILE D 211 PRO D 212 GLU D 213 SITE 4 AC4 17 ASP D 214 VAL D 217 HOH D 264 HOH D 273 SITE 5 AC4 17 HOH D 284 CRYST1 64.293 71.796 76.644 102.64 95.87 111.72 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015554 0.006197 0.003458 0.00000 SCALE2 0.000000 0.014993 0.004336 0.00000 SCALE3 0.000000 0.000000 0.013654 0.00000 MTRIX1 1 -0.816296 -0.576484 0.036422 -0.05569 1 MTRIX2 1 -0.577459 0.812876 -0.075984 0.10324 1 MTRIX3 1 0.014197 -0.083057 -0.996444 0.02754 1 MTRIX1 2 0.457269 0.060284 -0.887283 -16.22100 1 MTRIX2 2 0.697792 -0.642862 0.315935 63.75620 1 MTRIX3 2 -0.551354 -0.763606 -0.336026 -2.59737 1 MTRIX1 3 -0.783577 0.318854 0.533234 -23.93960 1 MTRIX2 3 0.339721 -0.498707 0.797422 61.16190 1 MTRIX3 3 0.520189 0.805992 0.282454 -2.25755 1 MTRIX1 4 -0.829505 -0.558349 0.012932 -0.43301 1 MTRIX2 4 -0.557704 0.826868 -0.072486 -0.15049 1 MTRIX3 4 0.029779 -0.067340 -0.997286 -0.13080 1 MTRIX1 5 0.464161 0.029462 -0.885260 -15.04340 1 MTRIX2 5 0.684016 -0.646897 0.337115 63.79740 1 MTRIX3 5 -0.562740 -0.762008 -0.320417 -2.65225 1 MTRIX1 6 -0.789982 0.310548 0.528667 -23.97150 1 MTRIX2 6 0.334230 -0.504751 0.795937 61.36340 1 MTRIX3 6 0.514022 0.805473 0.294950 -2.08804 1