HEADER CELL CYCLE,HYDROLASE/CELL CYCLE 25-MAR-11 3R9J TITLE 4.3A RESOLUTION STRUCTURE OF A MIND-MINE(I24N) PROTEIN COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: SEPTUM SITE-DETERMINING PROTEIN MIND; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CELL DIVISION INHIBITOR MIND; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: CELL DIVISION TOPOLOGICAL SPECIFICITY FACTOR; COMPND 9 CHAIN: C, D; COMPND 10 FRAGMENT: UNP RESIDUES 12-88; COMPND 11 SYNONYM: MINE; COMPND 12 ENGINEERED: YES; COMPND 13 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: B1175, JW1164, MIND; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 11 ORGANISM_TAXID: 83333; SOURCE 12 STRAIN: K12; SOURCE 13 GENE: B1174, JW1163, MINE; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 17 EXPRESSION_SYSTEM_PLASMID: PJB216 KEYWDS ATPASE, PROTEIN COMPLEX, BACTERIAL CELL DIVISION INHIBITOR, MINE, KEYWDS 2 CELL CYCLE, HYDROLASE-CELL CYCLE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.LOVELL,K.P.BATTAILE,K.-T.PARK,W.WU,T.HOLYOAK,J.LUTKENHAUS REVDAT 2 13-SEP-23 3R9J 1 REMARK SEQADV REVDAT 1 17-AUG-11 3R9J 0 JRNL AUTH K.T.PARK,W.WU,K.P.BATTAILE,S.LOVELL,T.HOLYOAK,J.LUTKENHAUS JRNL TITL THE MIN OSCILLATOR USES MIND-DEPENDENT CONFORMATIONAL JRNL TITL 2 CHANGES IN MINE TO SPATIALLY REGULATE CYTOKINESIS. JRNL REF CELL(CAMBRIDGE,MASS.) V. 146 396 2011 JRNL REFN ISSN 0092-8674 JRNL PMID 21816275 JRNL DOI 10.1016/J.CELL.2011.06.042 REMARK 2 REMARK 2 RESOLUTION. 4.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.71 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 9380 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.295 REMARK 3 R VALUE (WORKING SET) : 0.294 REMARK 3 FREE R VALUE : 0.311 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.850 REMARK 3 FREE R VALUE TEST SET COUNT : 455 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 5 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 4.30 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 4.81 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2575 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.3136 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2450 REMARK 3 BIN R VALUE (WORKING SET) : 0.3141 REMARK 3 BIN FREE R VALUE : 0.3031 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.85 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 125 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4919 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 54 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 134.7 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -26.97170 REMARK 3 B22 (A**2) : -26.97170 REMARK 3 B33 (A**2) : 53.94340 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 1.630 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.862 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.849 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5027 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 6812 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2431 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 152 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 712 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5027 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : 8 ; 0.000 ; HARMONIC REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 691 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5633 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.07 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.64 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 3.37 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3R9J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-MAR-11. REMARK 100 THE DEPOSITION ID IS D_1000064659. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : SCALA CCP4_3.3.16, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9437 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 12.84 REMARK 200 R MERGE (I) : 0.10800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.3547 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.40 REMARK 200 R MERGE FOR SHELL (I) : 0.52000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.490 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3R9I REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% W/V PEG3000, 100 MM CHES, 10 MM REMARK 280 EDTA, PH 9.5, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 142.48950 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 47.19650 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 47.19650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 213.73425 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 47.19650 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 47.19650 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 71.24475 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 47.19650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 47.19650 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 213.73425 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 47.19650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 47.19650 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 71.24475 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 142.48950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 0.000000 -1.000000 0.000000 47.19650 REMARK 350 BIOMT2 1 1.000000 0.000000 0.000000 -47.19650 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 -71.24475 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 0.000000 1.000000 0.000000 47.19650 REMARK 350 BIOMT2 1 -1.000000 0.000000 0.000000 47.19650 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 71.24475 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 163 REMARK 465 SER A 164 REMARK 465 ARG A 165 REMARK 465 ARG A 166 REMARK 465 ALA A 167 REMARK 465 GLU A 168 REMARK 465 ASN A 169 REMARK 465 GLU A 259 REMARK 465 LYS A 260 REMARK 465 MET B 1 REMARK 465 ARG B 165 REMARK 465 ARG B 166 REMARK 465 ALA B 167 REMARK 465 GLU B 168 REMARK 465 ASN B 169 REMARK 465 GLY B 170 REMARK 465 GLU B 171 REMARK 465 GLU B 259 REMARK 465 LYS B 260 REMARK 465 LYS C 12 REMARK 465 GLU C 83 REMARK 465 ALA C 84 REMARK 465 GLU C 85 REMARK 465 GLU C 86 REMARK 465 LEU C 87 REMARK 465 LYS C 88 REMARK 465 LYS D 12 REMARK 465 GLU D 83 REMARK 465 ALA D 84 REMARK 465 GLU D 85 REMARK 465 GLU D 86 REMARK 465 LEU D 87 REMARK 465 LYS D 88 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 79 CD NE CZ NH1 NH2 REMARK 470 LYS A 94 CG CD CE NZ REMARK 470 GLU A 126 CG CD OE1 OE2 REMARK 470 LYS A 206 CG CD CE NZ REMARK 470 ARG B 92 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 175 CG CD CE NZ REMARK 470 GLU B 201 CG CD OE1 OE2 REMARK 470 GLU B 250 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 9 -35.05 -174.56 REMARK 500 VAL A 57 -60.33 -104.15 REMARK 500 ALA A 96 -55.65 -16.14 REMARK 500 ASP A 113 31.28 72.13 REMARK 500 GLU A 126 -131.76 -73.44 REMARK 500 SER B 9 -34.31 -173.98 REMARK 500 ASP B 95 -108.32 -60.33 REMARK 500 ALA B 96 -75.18 51.97 REMARK 500 LEU B 97 85.59 -66.31 REMARK 500 ASP B 113 31.17 72.00 REMARK 500 GLU B 126 -129.71 -77.49 REMARK 500 SER B 162 46.03 -94.19 REMARK 500 ILE C 50 17.82 -53.38 REMARK 500 VAL C 54 -73.65 -117.50 REMARK 500 GLN C 55 89.64 95.20 REMARK 500 MET C 60 96.23 -23.27 REMARK 500 THR C 62 161.55 -49.64 REMARK 500 PRO D 36 -168.54 -77.37 REMARK 500 ILE D 50 17.56 -52.97 REMARK 500 VAL D 54 -72.51 -118.28 REMARK 500 GLN D 55 88.35 94.75 REMARK 500 MET D 60 107.14 13.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 261 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP B 261 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3Q9L RELATED DB: PDB REMARK 900 MIND-ATP COMPLEX REMARK 900 RELATED ID: 3R9I RELATED DB: PDB DBREF 3R9J A 1 260 UNP P0AEZ3 MIND_ECOLI 1 260 DBREF 3R9J B 1 260 UNP P0AEZ3 MIND_ECOLI 1 260 DBREF 3R9J C 12 88 UNP P0A734 MINE_ECOLI 12 88 DBREF 3R9J D 12 88 UNP P0A734 MINE_ECOLI 12 88 SEQADV 3R9J ALA A 40 UNP P0AEZ3 ASP 40 ENGINEERED MUTATION SEQADV 3R9J ALA B 40 UNP P0AEZ3 ASP 40 ENGINEERED MUTATION SEQADV 3R9J ASN C 24 UNP P0A734 ILE 24 ENGINEERED MUTATION SEQADV 3R9J ASN D 24 UNP P0A734 ILE 24 ENGINEERED MUTATION SEQRES 1 A 260 MET ALA ARG ILE ILE VAL VAL THR SER GLY LYS GLY GLY SEQRES 2 A 260 VAL GLY LYS THR THR SER SER ALA ALA ILE ALA THR GLY SEQRES 3 A 260 LEU ALA GLN LYS GLY LYS LYS THR VAL VAL ILE ASP PHE SEQRES 4 A 260 ALA ILE GLY LEU ARG ASN LEU ASP LEU ILE MET GLY CYS SEQRES 5 A 260 GLU ARG ARG VAL VAL TYR ASP PHE VAL ASN VAL ILE GLN SEQRES 6 A 260 GLY ASP ALA THR LEU ASN GLN ALA LEU ILE LYS ASP LYS SEQRES 7 A 260 ARG THR GLU ASN LEU TYR ILE LEU PRO ALA SER GLN THR SEQRES 8 A 260 ARG ASP LYS ASP ALA LEU THR ARG GLU GLY VAL ALA LYS SEQRES 9 A 260 VAL LEU ASP ASP LEU LYS ALA MET ASP PHE GLU PHE ILE SEQRES 10 A 260 VAL CYS ASP SER PRO ALA GLY ILE GLU THR GLY ALA LEU SEQRES 11 A 260 MET ALA LEU TYR PHE ALA ASP GLU ALA ILE ILE THR THR SEQRES 12 A 260 ASN PRO GLU VAL SER SER VAL ARG ASP SER ASP ARG ILE SEQRES 13 A 260 LEU GLY ILE LEU ALA SER LYS SER ARG ARG ALA GLU ASN SEQRES 14 A 260 GLY GLU GLU PRO ILE LYS GLU HIS LEU LEU LEU THR ARG SEQRES 15 A 260 TYR ASN PRO GLY ARG VAL SER ARG GLY ASP MET LEU SER SEQRES 16 A 260 MET GLU ASP VAL LEU GLU ILE LEU ARG ILE LYS LEU VAL SEQRES 17 A 260 GLY VAL ILE PRO GLU ASP GLN SER VAL LEU ARG ALA SER SEQRES 18 A 260 ASN GLN GLY GLU PRO VAL ILE LEU ASP ILE ASN ALA ASP SEQRES 19 A 260 ALA GLY LYS ALA TYR ALA ASP THR VAL GLU ARG LEU LEU SEQRES 20 A 260 GLY GLU GLU ARG PRO PHE ARG PHE ILE GLU GLU GLU LYS SEQRES 1 B 260 MET ALA ARG ILE ILE VAL VAL THR SER GLY LYS GLY GLY SEQRES 2 B 260 VAL GLY LYS THR THR SER SER ALA ALA ILE ALA THR GLY SEQRES 3 B 260 LEU ALA GLN LYS GLY LYS LYS THR VAL VAL ILE ASP PHE SEQRES 4 B 260 ALA ILE GLY LEU ARG ASN LEU ASP LEU ILE MET GLY CYS SEQRES 5 B 260 GLU ARG ARG VAL VAL TYR ASP PHE VAL ASN VAL ILE GLN SEQRES 6 B 260 GLY ASP ALA THR LEU ASN GLN ALA LEU ILE LYS ASP LYS SEQRES 7 B 260 ARG THR GLU ASN LEU TYR ILE LEU PRO ALA SER GLN THR SEQRES 8 B 260 ARG ASP LYS ASP ALA LEU THR ARG GLU GLY VAL ALA LYS SEQRES 9 B 260 VAL LEU ASP ASP LEU LYS ALA MET ASP PHE GLU PHE ILE SEQRES 10 B 260 VAL CYS ASP SER PRO ALA GLY ILE GLU THR GLY ALA LEU SEQRES 11 B 260 MET ALA LEU TYR PHE ALA ASP GLU ALA ILE ILE THR THR SEQRES 12 B 260 ASN PRO GLU VAL SER SER VAL ARG ASP SER ASP ARG ILE SEQRES 13 B 260 LEU GLY ILE LEU ALA SER LYS SER ARG ARG ALA GLU ASN SEQRES 14 B 260 GLY GLU GLU PRO ILE LYS GLU HIS LEU LEU LEU THR ARG SEQRES 15 B 260 TYR ASN PRO GLY ARG VAL SER ARG GLY ASP MET LEU SER SEQRES 16 B 260 MET GLU ASP VAL LEU GLU ILE LEU ARG ILE LYS LEU VAL SEQRES 17 B 260 GLY VAL ILE PRO GLU ASP GLN SER VAL LEU ARG ALA SER SEQRES 18 B 260 ASN GLN GLY GLU PRO VAL ILE LEU ASP ILE ASN ALA ASP SEQRES 19 B 260 ALA GLY LYS ALA TYR ALA ASP THR VAL GLU ARG LEU LEU SEQRES 20 B 260 GLY GLU GLU ARG PRO PHE ARG PHE ILE GLU GLU GLU LYS SEQRES 1 C 77 LYS ASN THR ALA ASN ILE ALA LYS GLU ARG LEU GLN ASN SEQRES 2 C 77 ILE VAL ALA GLU ARG ARG ARG SER ASP ALA GLU PRO HIS SEQRES 3 C 77 TYR LEU PRO GLN LEU ARG LYS ASP ILE LEU GLU VAL ILE SEQRES 4 C 77 CYS LYS TYR VAL GLN ILE ASP PRO GLU MET VAL THR VAL SEQRES 5 C 77 GLN LEU GLU GLN LYS ASP GLY ASP ILE SER ILE LEU GLU SEQRES 6 C 77 LEU ASN VAL THR LEU PRO GLU ALA GLU GLU LEU LYS SEQRES 1 D 77 LYS ASN THR ALA ASN ILE ALA LYS GLU ARG LEU GLN ASN SEQRES 2 D 77 ILE VAL ALA GLU ARG ARG ARG SER ASP ALA GLU PRO HIS SEQRES 3 D 77 TYR LEU PRO GLN LEU ARG LYS ASP ILE LEU GLU VAL ILE SEQRES 4 D 77 CYS LYS TYR VAL GLN ILE ASP PRO GLU MET VAL THR VAL SEQRES 5 D 77 GLN LEU GLU GLN LYS ASP GLY ASP ILE SER ILE LEU GLU SEQRES 6 D 77 LEU ASN VAL THR LEU PRO GLU ALA GLU GLU LEU LYS HET ADP A 261 27 HET ADP B 261 27 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE FORMUL 5 ADP 2(C10 H15 N5 O10 P2) HELIX 1 1 GLY A 15 LYS A 30 1 16 HELIX 2 2 ASN A 45 MET A 50 1 6 HELIX 3 3 ASP A 59 GLN A 65 1 7 HELIX 4 4 THR A 69 LEU A 74 1 6 HELIX 5 5 THR A 98 MET A 112 1 15 HELIX 6 6 GLU A 126 PHE A 135 1 10 HELIX 7 7 GLU A 146 ALA A 161 1 16 HELIX 8 8 ASN A 184 ARG A 190 1 7 HELIX 9 9 SER A 195 LEU A 203 1 9 HELIX 10 10 GLN A 215 GLY A 224 1 10 HELIX 11 11 PRO A 226 ASP A 230 5 5 HELIX 12 12 ALA A 233 LEU A 247 1 15 HELIX 13 13 GLY B 15 LYS B 30 1 16 HELIX 14 14 ASN B 45 MET B 50 1 6 HELIX 15 15 ASP B 59 GLN B 65 1 7 HELIX 16 16 THR B 69 LEU B 74 1 6 HELIX 17 17 THR B 98 MET B 112 1 15 HELIX 18 18 GLU B 126 PHE B 135 1 10 HELIX 19 19 GLU B 146 ALA B 161 1 16 HELIX 20 20 ASN B 184 ARG B 190 1 7 HELIX 21 21 SER B 195 LEU B 203 1 9 HELIX 22 22 GLN B 215 GLY B 224 1 10 HELIX 23 23 PRO B 226 ASP B 230 5 5 HELIX 24 24 ALA B 233 LEU B 247 1 15 HELIX 25 25 ASN C 13 ASP C 33 1 21 HELIX 26 26 TYR C 38 LEU C 47 1 10 HELIX 27 27 GLU C 48 LYS C 52 5 5 HELIX 28 28 ASN D 13 ASP D 33 1 21 HELIX 29 29 TYR D 38 LEU D 47 1 10 HELIX 30 30 GLU D 48 LYS D 52 5 5 SHEET 1 A 8 ILE A 75 LYS A 76 0 SHEET 2 A 8 LEU A 83 LEU A 86 -1 O ILE A 85 N ILE A 75 SHEET 3 A 8 THR A 34 ASP A 38 1 N ASP A 38 O LEU A 86 SHEET 4 A 8 PHE A 116 ASP A 120 1 O VAL A 118 N VAL A 35 SHEET 5 A 8 ARG A 3 THR A 8 1 N VAL A 7 O CYS A 119 SHEET 6 A 8 GLU A 138 THR A 143 1 O ILE A 140 N VAL A 6 SHEET 7 A 8 LYS A 175 TYR A 183 1 O THR A 181 N THR A 143 SHEET 8 A 8 LYS A 206 PRO A 212 1 O LYS A 206 N LEU A 178 SHEET 1 B 8 ILE B 75 LYS B 76 0 SHEET 2 B 8 LEU B 83 LEU B 86 -1 O ILE B 85 N ILE B 75 SHEET 3 B 8 THR B 34 ASP B 38 1 N ASP B 38 O LEU B 86 SHEET 4 B 8 PHE B 116 ASP B 120 1 O VAL B 118 N VAL B 35 SHEET 5 B 8 ARG B 3 THR B 8 1 N VAL B 7 O CYS B 119 SHEET 6 B 8 GLU B 138 THR B 143 1 O ILE B 140 N VAL B 6 SHEET 7 B 8 LYS B 175 TYR B 183 1 O THR B 181 N THR B 143 SHEET 8 B 8 LYS B 206 PRO B 212 1 O LYS B 206 N LEU B 178 SHEET 1 C 3 GLN C 64 LYS C 68 0 SHEET 2 C 3 ILE C 72 GLU C 76 -1 O GLU C 76 N GLN C 64 SHEET 3 C 3 THR D 80 LEU D 81 -1 O LEU D 81 N SER C 73 SHEET 1 D 3 THR C 80 LEU C 81 0 SHEET 2 D 3 ILE D 72 LEU D 77 -1 O SER D 73 N LEU C 81 SHEET 3 D 3 VAL D 63 LYS D 68 -1 N GLN D 64 O GLU D 76 CISPEP 1 PRO C 58 GLU C 59 0 6.17 CISPEP 2 PRO D 58 GLU D 59 0 1.53 SITE 1 AC1 14 GLY A 13 VAL A 14 GLY A 15 LYS A 16 SITE 2 AC1 14 THR A 17 THR A 18 ARG A 182 ILE A 211 SITE 3 AC1 14 PRO A 212 GLU A 213 ASP A 214 VAL A 217 SITE 4 AC1 14 LYS B 11 GLU B 146 SITE 1 AC2 13 LYS A 11 GLU A 146 GLY B 13 VAL B 14 SITE 2 AC2 13 GLY B 15 LYS B 16 THR B 17 THR B 18 SITE 3 AC2 13 ARG B 182 PRO B 212 GLU B 213 ASP B 214 SITE 4 AC2 13 VAL B 217 CRYST1 94.393 94.393 284.979 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010594 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010594 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003509 0.00000