HEADER TRANSFERASE 25-MAR-11 3R9L TITLE CRYSTAL STRUCTURE OF NUCLEOSIDE DIPHOSPHATE KINASE FROM GIARDIA TITLE 2 LAMBLIA FEATURING A DISORDERED DINUCLEOTIDE BINDING SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOSIDE DIPHOSPHATE KINASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.4.6; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GIARDIA LAMBLIA; SOURCE 3 ORGANISM_TAXID: 184922; SOURCE 4 STRAIN: ATCC 50803 / WB CLONE C6; SOURCE 5 GENE: GL50803_11301; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PAVA0421 KEYWDS STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 2 INFECTIOUS DISEASE, SSGCID, GIARDIASIS, INTESTINAL DISEASE, KEYWDS 3 PROTOZOAN PARASITE, WATER CONTAMINANT, KINASE, PHOSPHORYLTRANSFER, KEYWDS 4 ADP, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 13-SEP-23 3R9L 1 REMARK SEQADV REVDAT 1 20-APR-11 3R9L 0 JRNL AUTH T.E.EDWARDS,A.S.GARDBERG,B.SANKARAN, JRNL AUTH 2 SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE JRNL AUTH 3 (SSGCID) JRNL TITL CRYSTAL STRUCTURE OF NUCLEOSIDE DIPHOSPHATE KINASE FROM JRNL TITL 2 GIARDIA LAMBLIA FEATURING A DISORDERED DINUCLEOTIDE BINDING JRNL TITL 3 SITE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 7619 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.236 REMARK 3 R VALUE (WORKING SET) : 0.234 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 348 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.72 REMARK 3 REFLECTION IN BIN (WORKING SET) : 540 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.47 REMARK 3 BIN R VALUE (WORKING SET) : 0.3240 REMARK 3 BIN FREE R VALUE SET COUNT : 22 REMARK 3 BIN FREE R VALUE : 0.3620 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 813 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 13 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 60.86 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 78.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.33000 REMARK 3 B22 (A**2) : 1.33000 REMARK 3 B33 (A**2) : -2.00000 REMARK 3 B12 (A**2) : 0.67000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.243 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.172 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.006 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.925 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.907 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 827 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1120 ; 1.278 ; 1.948 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 110 ; 6.811 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 32 ;29.361 ;22.188 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 123 ;14.313 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;28.396 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 128 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 628 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 551 ; 0.854 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 871 ; 1.571 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 276 ; 1.539 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 249 ; 2.695 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 9 REMARK 3 ORIGIN FOR THE GROUP (A): 42.5508 -49.7868 -2.2016 REMARK 3 T TENSOR REMARK 3 T11: 0.5665 T22: 0.5012 REMARK 3 T33: 0.2762 T12: -0.4438 REMARK 3 T13: -0.0605 T23: 0.1955 REMARK 3 L TENSOR REMARK 3 L11: -0.1892 L22: -1.4193 REMARK 3 L33: 9.5645 L12: -0.4509 REMARK 3 L13: 1.4067 L23: -2.7118 REMARK 3 S TENSOR REMARK 3 S11: -0.6114 S12: -0.1349 S13: 0.2306 REMARK 3 S21: 0.0468 S22: -0.1360 S23: -0.6238 REMARK 3 S31: 0.7019 S32: -1.2075 S33: 0.7474 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 10 A 106 REMARK 3 ORIGIN FOR THE GROUP (A): 45.5237 -39.3486 -5.7882 REMARK 3 T TENSOR REMARK 3 T11: 0.0732 T22: 0.1726 REMARK 3 T33: 0.1190 T12: -0.0754 REMARK 3 T13: 0.0094 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 1.0021 L22: 0.3253 REMARK 3 L33: 2.2016 L12: 0.5558 REMARK 3 L13: 0.2785 L23: -0.1792 REMARK 3 S TENSOR REMARK 3 S11: -0.0100 S12: -0.1077 S13: 0.0531 REMARK 3 S21: 0.0330 S22: -0.0741 S23: -0.0443 REMARK 3 S31: 0.0587 S32: -0.3640 S33: 0.0841 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 107 A 123 REMARK 3 ORIGIN FOR THE GROUP (A): 41.3597 -35.2567 -0.3983 REMARK 3 T TENSOR REMARK 3 T11: 0.1763 T22: 0.3647 REMARK 3 T33: 0.3097 T12: -0.0342 REMARK 3 T13: 0.0610 T23: -0.0835 REMARK 3 L TENSOR REMARK 3 L11: 1.4323 L22: -1.3243 REMARK 3 L33: 3.0736 L12: -0.4106 REMARK 3 L13: -0.4175 L23: 2.4604 REMARK 3 S TENSOR REMARK 3 S11: -0.0248 S12: -0.3465 S13: 0.5661 REMARK 3 S21: -0.0106 S22: -0.0239 S23: 0.1407 REMARK 3 S31: -0.4427 S32: -0.3767 S33: 0.0488 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 124 A 139 REMARK 3 ORIGIN FOR THE GROUP (A): 33.6002 -50.3939 -4.5500 REMARK 3 T TENSOR REMARK 3 T11: 0.3326 T22: 0.5238 REMARK 3 T33: 0.0425 T12: -0.4470 REMARK 3 T13: 0.1664 T23: 0.0013 REMARK 3 L TENSOR REMARK 3 L11: 12.8190 L22: 3.8305 REMARK 3 L33: -5.6608 L12: 11.8183 REMARK 3 L13: 4.8362 L23: 0.2214 REMARK 3 S TENSOR REMARK 3 S11: 1.0619 S12: -0.8141 S13: 0.5512 REMARK 3 S21: 0.5450 S22: -1.0113 S23: 0.6065 REMARK 3 S31: 0.7726 S32: -0.3410 S33: -0.0507 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 3R9L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-MAR-11. REMARK 100 THE DEPOSITION ID IS D_1000064661. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-MAR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7665 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.0200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : 0.52600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.260 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: PDB ENTRY 1NPK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: GILAA.00438.A.A1 PW27083 AT 24.97 REMARK 280 MG/ML IN 25 MM HEPES PH 7.0, 0.5 M NACL, 5% GLYCEROL, 2 MM DTT, REMARK 280 0.025% AZIDE AGAINST CSHT C11 FOCUS SCREEN 0.1 M HEPES PH 7.0, REMARK 280 0.9 M NA PHOSPHATE, 0.9 M K PHOSPHATE WITH 25% ETHYLENE GLYCOL REMARK 280 AS CRYO-PROTECTANT, CRYSTAL TRACKING ID 216300H9, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 289K, PH 7.9 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 31.34500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 31.34500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 31.34500 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 31.34500 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 31.34500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 31.34500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -83.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 58.48000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -101.29033 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 116.96000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -31.34500 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 116.96000 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 -31.34500 REMARK 350 BIOMT1 6 0.500000 0.866025 0.000000 58.48000 REMARK 350 BIOMT2 6 0.866025 -0.500000 0.000000 -101.29033 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 -31.34500 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 VAL A 41 REMARK 465 PRO A 42 REMARK 465 SER A 43 REMARK 465 LYS A 44 REMARK 465 ASN A 45 REMARK 465 LEU A 46 REMARK 465 VAL A 47 REMARK 465 GLU A 48 REMARK 465 GLU A 49 REMARK 465 HIS A 50 REMARK 465 TYR A 51 REMARK 465 LYS A 52 REMARK 465 GLU A 53 REMARK 465 HIS A 54 REMARK 465 ALA A 55 REMARK 465 ALA A 56 REMARK 465 ARG A 57 REMARK 465 PRO A 58 REMARK 465 PHE A 59 REMARK 465 PHE A 60 REMARK 465 ALA A 61 REMARK 465 GLY A 62 REMARK 465 LEU A 63 REMARK 465 CYS A 64 REMARK 465 LYS A 65 REMARK 465 PHE A 66 REMARK 465 LEU A 67 REMARK 465 SER A 140 REMARK 465 TRP A 141 REMARK 465 SER A 142 REMARK 465 CYS A 143 REMARK 465 SER A 144 REMARK 465 LEU A 145 REMARK 465 GLU A 146 REMARK 465 SER A 147 REMARK 465 HIS A 148 REMARK 465 ILE A 149 REMARK 465 TYR A 150 REMARK 465 GLU A 151 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 ARG A 3 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 16 CG CD OE1 NE2 REMARK 470 LYS A 33 CG CD CE NZ REMARK 470 LYS A 38 CG CD CE NZ REMARK 470 PHE A 40 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 94 CG CD CE NZ REMARK 470 ARG A 127 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 134 CG CD CE NZ REMARK 470 GLU A 136 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 95 -14.26 -45.69 REMARK 500 ILE A 109 -98.00 -98.32 REMARK 500 ILE A 115 -44.60 76.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 152 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: GILAA.00438.A RELATED DB: TARGETDB DBREF 3R9L A 1 151 UNP A8BMG9 A8BMG9_GIAIC 1 151 SEQADV 3R9L GLY A -3 UNP A8BMG9 EXPRESSION TAG SEQADV 3R9L PRO A -2 UNP A8BMG9 EXPRESSION TAG SEQADV 3R9L GLY A -1 UNP A8BMG9 EXPRESSION TAG SEQADV 3R9L SER A 0 UNP A8BMG9 EXPRESSION TAG SEQRES 1 A 155 GLY PRO GLY SER MET ALA ARG GLU ARG THR PHE LEU MET SEQRES 2 A 155 VAL LYS PRO ASP GLY VAL GLN ARG GLY LEU VAL GLY GLU SEQRES 3 A 155 ILE ILE SER ARG PHE GLU ARG ARG GLY PHE LYS LEU VAL SEQRES 4 A 155 ALA MET LYS PHE PHE VAL PRO SER LYS ASN LEU VAL GLU SEQRES 5 A 155 GLU HIS TYR LYS GLU HIS ALA ALA ARG PRO PHE PHE ALA SEQRES 6 A 155 GLY LEU CYS LYS PHE LEU SER SER GLY PRO VAL CYS ALA SEQRES 7 A 155 MET VAL TRP GLU GLY ALA ASN VAL VAL SER ILE SER ARG SEQRES 8 A 155 THR MET MET GLY VAL THR LYS PRO ALA GLU SER ALA PRO SEQRES 9 A 155 GLY THR ILE ARG GLY ASP PHE GLY ILE ASP VAL GLY ARG SEQRES 10 A 155 ASN ILE ILE HIS GLY SER ALA ASN LEU ASP ASP ALA ALA SEQRES 11 A 155 ARG GLU ILE ALA LEU TRP PHE LYS PRO GLU GLU VAL ALA SEQRES 12 A 155 SER TRP SER CYS SER LEU GLU SER HIS ILE TYR GLU HET CL A 152 1 HETNAM CL CHLORIDE ION FORMUL 2 CL CL 1- FORMUL 3 HOH *13(H2 O) HELIX 1 1 LYS A 11 ARG A 17 1 7 HELIX 2 2 LEU A 19 GLY A 31 1 13 HELIX 3 3 ASN A 81 GLY A 91 1 11 HELIX 4 4 THR A 102 GLY A 108 1 7 HELIX 5 5 ASN A 121 PHE A 133 1 13 SHEET 1 A 4 LYS A 33 LYS A 38 0 SHEET 2 A 4 CYS A 73 GLU A 78 -1 O VAL A 76 N VAL A 35 SHEET 3 A 4 ARG A 5 VAL A 10 -1 N LEU A 8 O MET A 75 SHEET 4 A 4 ILE A 116 GLY A 118 -1 O HIS A 117 N MET A 9 SITE 1 AC1 2 LYS A 11 HIS A 117 CRYST1 116.960 116.960 62.690 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008550 0.004936 0.000000 0.00000 SCALE2 0.000000 0.009873 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015952 0.00000