data_3RA8 # _entry.id 3RA8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3RA8 pdb_00003ra8 10.2210/pdb3ra8/pdb RCSB RCSB064684 ? ? WWPDB D_1000064684 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-09-21 2 'Structure model' 1 1 2011-11-16 3 'Structure model' 1 2 2013-06-26 4 'Structure model' 1 3 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Other 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_oper_list.name' 4 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 5 4 'Structure model' '_pdbx_struct_oper_list.type' 6 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 7 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 8 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 3RA8 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-03-27 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3RA2 'AAV8 capsid pH 4' unspecified PDB 3RA4 'AAV8 capsid pH 7.5' unspecified PDB 3RA9 . unspecified PDB 3RAA . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nam, H.-J.' 1 'Gurda, B.' 2 'McKenna, R.' 3 'Porter, M.' 4 'Byrne, B.' 5 'Salganik, M.' 6 'Muzyczka, N.' 7 'Agbandje-McKenna, M.' 8 # _citation.id primary _citation.title 'Structural studies of adeno-associated virus serotype 8 capsid transitions associated with endosomal trafficking.' _citation.journal_abbrev J.Virol. _citation.journal_volume 85 _citation.page_first 11791 _citation.page_last 11799 _citation.year 2011 _citation.journal_id_ASTM JOVIAM _citation.country US _citation.journal_id_ISSN 0022-538X _citation.journal_id_CSD 0825 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21900159 _citation.pdbx_database_id_DOI 10.1128/JVI.05305-11 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nam, H.J.' 1 ? primary 'Gurda, B.L.' 2 ? primary 'McKenna, R.' 3 ? primary 'Potter, M.' 4 ? primary 'Byrne, B.' 5 ? primary 'Salganik, M.' 6 ? primary 'Muzyczka, N.' 7 ? primary 'Agbandje-McKenna, M.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Capsid protein' 58528.367 1 ? ? ? ? 2 non-polymer syn "ADENOSINE-5'-MONOPHOSPHATE" 347.221 1 ? ? ? ? 3 water nat water 18.015 85 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DGVGSSSGNWHCDSTWLGDRVITTSTRTWALPTYNNHLYKQISNGTSGGATNDNTYFGYSTPWGYFDFNRFHCHFSPRDW QRLINNNWGFRPKRLSFKLFNIQVKEVTQNEGTKTIANNLTSTIQVFTDSEYQLPYVLGSAHQGCLPPFPADVFMIPQYG YLTLNNGSQAVGRSSFYCLEYFPSQMLRTGNNFQFTYTFEDVPFHSSYAHSQSLDRLMNPLIDQYLYYLSRTQTTGGTAN TQTLGFSQGGPNTMANQAKNWLPGPCYRQQRVSTTTGQNNNSNFAWTAGTKYHLNGRNSLANPGIAMATHKDDEERFFPS NGILIFGKQNAARDNADYSDVMLTSEEEIKTTNPVATEEYGIVADNLQQQNTAPQIGTVNSQGALPGMVWQNRDVYLQGP IWAKIPHTDGNFHPSPLMGGFGLKHPPPQILIKNTPVPADPPTTFNQSKLNSFITQYSTGQVSVEIEWELQKENSKRWNP EIQYTSNYYKSTSVDFAVNTEGVYSEPRPIGTRYLTRNL ; _entity_poly.pdbx_seq_one_letter_code_can ;DGVGSSSGNWHCDSTWLGDRVITTSTRTWALPTYNNHLYKQISNGTSGGATNDNTYFGYSTPWGYFDFNRFHCHFSPRDW QRLINNNWGFRPKRLSFKLFNIQVKEVTQNEGTKTIANNLTSTIQVFTDSEYQLPYVLGSAHQGCLPPFPADVFMIPQYG YLTLNNGSQAVGRSSFYCLEYFPSQMLRTGNNFQFTYTFEDVPFHSSYAHSQSLDRLMNPLIDQYLYYLSRTQTTGGTAN TQTLGFSQGGPNTMANQAKNWLPGPCYRQQRVSTTTGQNNNSNFAWTAGTKYHLNGRNSLANPGIAMATHKDDEERFFPS NGILIFGKQNAARDNADYSDVMLTSEEEIKTTNPVATEEYGIVADNLQQQNTAPQIGTVNSQGALPGMVWQNRDVYLQGP IWAKIPHTDGNFHPSPLMGGFGLKHPPPQILIKNTPVPADPPTTFNQSKLNSFITQYSTGQVSVEIEWELQKENSKRWNP EIQYTSNYYKSTSVDFAVNTEGVYSEPRPIGTRYLTRNL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "ADENOSINE-5'-MONOPHOSPHATE" A 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 GLY n 1 3 VAL n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 SER n 1 8 GLY n 1 9 ASN n 1 10 TRP n 1 11 HIS n 1 12 CYS n 1 13 ASP n 1 14 SER n 1 15 THR n 1 16 TRP n 1 17 LEU n 1 18 GLY n 1 19 ASP n 1 20 ARG n 1 21 VAL n 1 22 ILE n 1 23 THR n 1 24 THR n 1 25 SER n 1 26 THR n 1 27 ARG n 1 28 THR n 1 29 TRP n 1 30 ALA n 1 31 LEU n 1 32 PRO n 1 33 THR n 1 34 TYR n 1 35 ASN n 1 36 ASN n 1 37 HIS n 1 38 LEU n 1 39 TYR n 1 40 LYS n 1 41 GLN n 1 42 ILE n 1 43 SER n 1 44 ASN n 1 45 GLY n 1 46 THR n 1 47 SER n 1 48 GLY n 1 49 GLY n 1 50 ALA n 1 51 THR n 1 52 ASN n 1 53 ASP n 1 54 ASN n 1 55 THR n 1 56 TYR n 1 57 PHE n 1 58 GLY n 1 59 TYR n 1 60 SER n 1 61 THR n 1 62 PRO n 1 63 TRP n 1 64 GLY n 1 65 TYR n 1 66 PHE n 1 67 ASP n 1 68 PHE n 1 69 ASN n 1 70 ARG n 1 71 PHE n 1 72 HIS n 1 73 CYS n 1 74 HIS n 1 75 PHE n 1 76 SER n 1 77 PRO n 1 78 ARG n 1 79 ASP n 1 80 TRP n 1 81 GLN n 1 82 ARG n 1 83 LEU n 1 84 ILE n 1 85 ASN n 1 86 ASN n 1 87 ASN n 1 88 TRP n 1 89 GLY n 1 90 PHE n 1 91 ARG n 1 92 PRO n 1 93 LYS n 1 94 ARG n 1 95 LEU n 1 96 SER n 1 97 PHE n 1 98 LYS n 1 99 LEU n 1 100 PHE n 1 101 ASN n 1 102 ILE n 1 103 GLN n 1 104 VAL n 1 105 LYS n 1 106 GLU n 1 107 VAL n 1 108 THR n 1 109 GLN n 1 110 ASN n 1 111 GLU n 1 112 GLY n 1 113 THR n 1 114 LYS n 1 115 THR n 1 116 ILE n 1 117 ALA n 1 118 ASN n 1 119 ASN n 1 120 LEU n 1 121 THR n 1 122 SER n 1 123 THR n 1 124 ILE n 1 125 GLN n 1 126 VAL n 1 127 PHE n 1 128 THR n 1 129 ASP n 1 130 SER n 1 131 GLU n 1 132 TYR n 1 133 GLN n 1 134 LEU n 1 135 PRO n 1 136 TYR n 1 137 VAL n 1 138 LEU n 1 139 GLY n 1 140 SER n 1 141 ALA n 1 142 HIS n 1 143 GLN n 1 144 GLY n 1 145 CYS n 1 146 LEU n 1 147 PRO n 1 148 PRO n 1 149 PHE n 1 150 PRO n 1 151 ALA n 1 152 ASP n 1 153 VAL n 1 154 PHE n 1 155 MET n 1 156 ILE n 1 157 PRO n 1 158 GLN n 1 159 TYR n 1 160 GLY n 1 161 TYR n 1 162 LEU n 1 163 THR n 1 164 LEU n 1 165 ASN n 1 166 ASN n 1 167 GLY n 1 168 SER n 1 169 GLN n 1 170 ALA n 1 171 VAL n 1 172 GLY n 1 173 ARG n 1 174 SER n 1 175 SER n 1 176 PHE n 1 177 TYR n 1 178 CYS n 1 179 LEU n 1 180 GLU n 1 181 TYR n 1 182 PHE n 1 183 PRO n 1 184 SER n 1 185 GLN n 1 186 MET n 1 187 LEU n 1 188 ARG n 1 189 THR n 1 190 GLY n 1 191 ASN n 1 192 ASN n 1 193 PHE n 1 194 GLN n 1 195 PHE n 1 196 THR n 1 197 TYR n 1 198 THR n 1 199 PHE n 1 200 GLU n 1 201 ASP n 1 202 VAL n 1 203 PRO n 1 204 PHE n 1 205 HIS n 1 206 SER n 1 207 SER n 1 208 TYR n 1 209 ALA n 1 210 HIS n 1 211 SER n 1 212 GLN n 1 213 SER n 1 214 LEU n 1 215 ASP n 1 216 ARG n 1 217 LEU n 1 218 MET n 1 219 ASN n 1 220 PRO n 1 221 LEU n 1 222 ILE n 1 223 ASP n 1 224 GLN n 1 225 TYR n 1 226 LEU n 1 227 TYR n 1 228 TYR n 1 229 LEU n 1 230 SER n 1 231 ARG n 1 232 THR n 1 233 GLN n 1 234 THR n 1 235 THR n 1 236 GLY n 1 237 GLY n 1 238 THR n 1 239 ALA n 1 240 ASN n 1 241 THR n 1 242 GLN n 1 243 THR n 1 244 LEU n 1 245 GLY n 1 246 PHE n 1 247 SER n 1 248 GLN n 1 249 GLY n 1 250 GLY n 1 251 PRO n 1 252 ASN n 1 253 THR n 1 254 MET n 1 255 ALA n 1 256 ASN n 1 257 GLN n 1 258 ALA n 1 259 LYS n 1 260 ASN n 1 261 TRP n 1 262 LEU n 1 263 PRO n 1 264 GLY n 1 265 PRO n 1 266 CYS n 1 267 TYR n 1 268 ARG n 1 269 GLN n 1 270 GLN n 1 271 ARG n 1 272 VAL n 1 273 SER n 1 274 THR n 1 275 THR n 1 276 THR n 1 277 GLY n 1 278 GLN n 1 279 ASN n 1 280 ASN n 1 281 ASN n 1 282 SER n 1 283 ASN n 1 284 PHE n 1 285 ALA n 1 286 TRP n 1 287 THR n 1 288 ALA n 1 289 GLY n 1 290 THR n 1 291 LYS n 1 292 TYR n 1 293 HIS n 1 294 LEU n 1 295 ASN n 1 296 GLY n 1 297 ARG n 1 298 ASN n 1 299 SER n 1 300 LEU n 1 301 ALA n 1 302 ASN n 1 303 PRO n 1 304 GLY n 1 305 ILE n 1 306 ALA n 1 307 MET n 1 308 ALA n 1 309 THR n 1 310 HIS n 1 311 LYS n 1 312 ASP n 1 313 ASP n 1 314 GLU n 1 315 GLU n 1 316 ARG n 1 317 PHE n 1 318 PHE n 1 319 PRO n 1 320 SER n 1 321 ASN n 1 322 GLY n 1 323 ILE n 1 324 LEU n 1 325 ILE n 1 326 PHE n 1 327 GLY n 1 328 LYS n 1 329 GLN n 1 330 ASN n 1 331 ALA n 1 332 ALA n 1 333 ARG n 1 334 ASP n 1 335 ASN n 1 336 ALA n 1 337 ASP n 1 338 TYR n 1 339 SER n 1 340 ASP n 1 341 VAL n 1 342 MET n 1 343 LEU n 1 344 THR n 1 345 SER n 1 346 GLU n 1 347 GLU n 1 348 GLU n 1 349 ILE n 1 350 LYS n 1 351 THR n 1 352 THR n 1 353 ASN n 1 354 PRO n 1 355 VAL n 1 356 ALA n 1 357 THR n 1 358 GLU n 1 359 GLU n 1 360 TYR n 1 361 GLY n 1 362 ILE n 1 363 VAL n 1 364 ALA n 1 365 ASP n 1 366 ASN n 1 367 LEU n 1 368 GLN n 1 369 GLN n 1 370 GLN n 1 371 ASN n 1 372 THR n 1 373 ALA n 1 374 PRO n 1 375 GLN n 1 376 ILE n 1 377 GLY n 1 378 THR n 1 379 VAL n 1 380 ASN n 1 381 SER n 1 382 GLN n 1 383 GLY n 1 384 ALA n 1 385 LEU n 1 386 PRO n 1 387 GLY n 1 388 MET n 1 389 VAL n 1 390 TRP n 1 391 GLN n 1 392 ASN n 1 393 ARG n 1 394 ASP n 1 395 VAL n 1 396 TYR n 1 397 LEU n 1 398 GLN n 1 399 GLY n 1 400 PRO n 1 401 ILE n 1 402 TRP n 1 403 ALA n 1 404 LYS n 1 405 ILE n 1 406 PRO n 1 407 HIS n 1 408 THR n 1 409 ASP n 1 410 GLY n 1 411 ASN n 1 412 PHE n 1 413 HIS n 1 414 PRO n 1 415 SER n 1 416 PRO n 1 417 LEU n 1 418 MET n 1 419 GLY n 1 420 GLY n 1 421 PHE n 1 422 GLY n 1 423 LEU n 1 424 LYS n 1 425 HIS n 1 426 PRO n 1 427 PRO n 1 428 PRO n 1 429 GLN n 1 430 ILE n 1 431 LEU n 1 432 ILE n 1 433 LYS n 1 434 ASN n 1 435 THR n 1 436 PRO n 1 437 VAL n 1 438 PRO n 1 439 ALA n 1 440 ASP n 1 441 PRO n 1 442 PRO n 1 443 THR n 1 444 THR n 1 445 PHE n 1 446 ASN n 1 447 GLN n 1 448 SER n 1 449 LYS n 1 450 LEU n 1 451 ASN n 1 452 SER n 1 453 PHE n 1 454 ILE n 1 455 THR n 1 456 GLN n 1 457 TYR n 1 458 SER n 1 459 THR n 1 460 GLY n 1 461 GLN n 1 462 VAL n 1 463 SER n 1 464 VAL n 1 465 GLU n 1 466 ILE n 1 467 GLU n 1 468 TRP n 1 469 GLU n 1 470 LEU n 1 471 GLN n 1 472 LYS n 1 473 GLU n 1 474 ASN n 1 475 SER n 1 476 LYS n 1 477 ARG n 1 478 TRP n 1 479 ASN n 1 480 PRO n 1 481 GLU n 1 482 ILE n 1 483 GLN n 1 484 TYR n 1 485 THR n 1 486 SER n 1 487 ASN n 1 488 TYR n 1 489 TYR n 1 490 LYS n 1 491 SER n 1 492 THR n 1 493 SER n 1 494 VAL n 1 495 ASP n 1 496 PHE n 1 497 ALA n 1 498 VAL n 1 499 ASN n 1 500 THR n 1 501 GLU n 1 502 GLY n 1 503 VAL n 1 504 TYR n 1 505 SER n 1 506 GLU n 1 507 PRO n 1 508 ARG n 1 509 PRO n 1 510 ILE n 1 511 GLY n 1 512 THR n 1 513 ARG n 1 514 TYR n 1 515 LEU n 1 516 THR n 1 517 ARG n 1 518 ASN n 1 519 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Adeno Associated Virus' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'Serotype 8' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Adeno-associated virus - 8' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 202813 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name human _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line 'MAMMALIAN KIDNEY CELLS HEK293' _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 220 220 ASP ASP A . n A 1 2 GLY 2 221 221 GLY GLY A . n A 1 3 VAL 3 222 222 VAL VAL A . n A 1 4 GLY 4 223 223 GLY GLY A . n A 1 5 SER 5 224 224 SER SER A . n A 1 6 SER 6 225 225 SER SER A . n A 1 7 SER 7 226 226 SER SER A . n A 1 8 GLY 8 227 227 GLY GLY A . n A 1 9 ASN 9 228 228 ASN ASN A . n A 1 10 TRP 10 229 229 TRP TRP A . n A 1 11 HIS 11 230 230 HIS HIS A . n A 1 12 CYS 12 231 231 CYS CYS A . n A 1 13 ASP 13 232 232 ASP ASP A . n A 1 14 SER 14 233 233 SER SER A . n A 1 15 THR 15 234 234 THR THR A . n A 1 16 TRP 16 235 235 TRP TRP A . n A 1 17 LEU 17 236 236 LEU LEU A . n A 1 18 GLY 18 237 237 GLY GLY A . n A 1 19 ASP 19 238 238 ASP ASP A . n A 1 20 ARG 20 239 239 ARG ARG A . n A 1 21 VAL 21 240 240 VAL VAL A . n A 1 22 ILE 22 241 241 ILE ILE A . n A 1 23 THR 23 242 242 THR THR A . n A 1 24 THR 24 243 243 THR THR A . n A 1 25 SER 25 244 244 SER SER A . n A 1 26 THR 26 245 245 THR THR A . n A 1 27 ARG 27 246 246 ARG ARG A . n A 1 28 THR 28 247 247 THR THR A . n A 1 29 TRP 29 248 248 TRP TRP A . n A 1 30 ALA 30 249 249 ALA ALA A . n A 1 31 LEU 31 250 250 LEU LEU A . n A 1 32 PRO 32 251 251 PRO PRO A . n A 1 33 THR 33 252 252 THR THR A . n A 1 34 TYR 34 253 253 TYR TYR A . n A 1 35 ASN 35 254 254 ASN ASN A . n A 1 36 ASN 36 255 255 ASN ASN A . n A 1 37 HIS 37 256 256 HIS HIS A . n A 1 38 LEU 38 257 257 LEU LEU A . n A 1 39 TYR 39 258 258 TYR TYR A . n A 1 40 LYS 40 259 259 LYS LYS A . n A 1 41 GLN 41 260 260 GLN GLN A . n A 1 42 ILE 42 261 261 ILE ILE A . n A 1 43 SER 43 262 262 SER SER A . n A 1 44 ASN 44 263 263 ASN ASN A . n A 1 45 GLY 45 264 264 GLY GLY A . n A 1 46 THR 46 265 265 THR THR A . n A 1 47 SER 47 266 266 SER SER A . n A 1 48 GLY 48 267 267 GLY GLY A . n A 1 49 GLY 49 268 268 GLY GLY A . n A 1 50 ALA 50 269 269 ALA ALA A . n A 1 51 THR 51 270 270 THR THR A . n A 1 52 ASN 52 271 271 ASN ASN A . n A 1 53 ASP 53 272 272 ASP ASP A . n A 1 54 ASN 54 273 273 ASN ASN A . n A 1 55 THR 55 274 274 THR THR A . n A 1 56 TYR 56 275 275 TYR TYR A . n A 1 57 PHE 57 276 276 PHE PHE A . n A 1 58 GLY 58 277 277 GLY GLY A . n A 1 59 TYR 59 278 278 TYR TYR A . n A 1 60 SER 60 279 279 SER SER A . n A 1 61 THR 61 280 280 THR THR A . n A 1 62 PRO 62 281 281 PRO PRO A . n A 1 63 TRP 63 282 282 TRP TRP A . n A 1 64 GLY 64 283 283 GLY GLY A . n A 1 65 TYR 65 284 284 TYR TYR A . n A 1 66 PHE 66 285 285 PHE PHE A . n A 1 67 ASP 67 286 286 ASP ASP A . n A 1 68 PHE 68 287 287 PHE PHE A . n A 1 69 ASN 69 288 288 ASN ASN A . n A 1 70 ARG 70 289 289 ARG ARG A . n A 1 71 PHE 71 290 290 PHE PHE A . n A 1 72 HIS 72 291 291 HIS HIS A . n A 1 73 CYS 73 292 292 CYS CYS A . n A 1 74 HIS 74 293 293 HIS HIS A . n A 1 75 PHE 75 294 294 PHE PHE A . n A 1 76 SER 76 295 295 SER SER A . n A 1 77 PRO 77 296 296 PRO PRO A . n A 1 78 ARG 78 297 297 ARG ARG A . n A 1 79 ASP 79 298 298 ASP ASP A . n A 1 80 TRP 80 299 299 TRP TRP A . n A 1 81 GLN 81 300 300 GLN GLN A . n A 1 82 ARG 82 301 301 ARG ARG A . n A 1 83 LEU 83 302 302 LEU LEU A . n A 1 84 ILE 84 303 303 ILE ILE A . n A 1 85 ASN 85 304 304 ASN ASN A . n A 1 86 ASN 86 305 305 ASN ASN A . n A 1 87 ASN 87 306 306 ASN ASN A . n A 1 88 TRP 88 307 307 TRP TRP A . n A 1 89 GLY 89 308 308 GLY GLY A . n A 1 90 PHE 90 309 309 PHE PHE A . n A 1 91 ARG 91 310 310 ARG ARG A . n A 1 92 PRO 92 311 311 PRO PRO A . n A 1 93 LYS 93 312 312 LYS LYS A . n A 1 94 ARG 94 313 313 ARG ARG A . n A 1 95 LEU 95 314 314 LEU LEU A . n A 1 96 SER 96 315 315 SER SER A . n A 1 97 PHE 97 316 316 PHE PHE A . n A 1 98 LYS 98 317 317 LYS LYS A . n A 1 99 LEU 99 318 318 LEU LEU A . n A 1 100 PHE 100 319 319 PHE PHE A . n A 1 101 ASN 101 320 320 ASN ASN A . n A 1 102 ILE 102 321 321 ILE ILE A . n A 1 103 GLN 103 322 322 GLN GLN A . n A 1 104 VAL 104 323 323 VAL VAL A . n A 1 105 LYS 105 324 324 LYS LYS A . n A 1 106 GLU 106 325 325 GLU GLU A . n A 1 107 VAL 107 326 326 VAL VAL A . n A 1 108 THR 108 327 327 THR THR A . n A 1 109 GLN 109 328 328 GLN GLN A . n A 1 110 ASN 110 329 329 ASN ASN A . n A 1 111 GLU 111 330 330 GLU GLU A . n A 1 112 GLY 112 331 331 GLY GLY A . n A 1 113 THR 113 332 332 THR THR A . n A 1 114 LYS 114 333 333 LYS LYS A . n A 1 115 THR 115 334 334 THR THR A . n A 1 116 ILE 116 335 335 ILE ILE A . n A 1 117 ALA 117 336 336 ALA ALA A . n A 1 118 ASN 118 337 337 ASN ASN A . n A 1 119 ASN 119 338 338 ASN ASN A . n A 1 120 LEU 120 339 339 LEU LEU A . n A 1 121 THR 121 340 340 THR THR A . n A 1 122 SER 122 341 341 SER SER A . n A 1 123 THR 123 342 342 THR THR A . n A 1 124 ILE 124 343 343 ILE ILE A . n A 1 125 GLN 125 344 344 GLN GLN A . n A 1 126 VAL 126 345 345 VAL VAL A . n A 1 127 PHE 127 346 346 PHE PHE A . n A 1 128 THR 128 347 347 THR THR A . n A 1 129 ASP 129 348 348 ASP ASP A . n A 1 130 SER 130 349 349 SER SER A . n A 1 131 GLU 131 350 350 GLU GLU A . n A 1 132 TYR 132 351 351 TYR TYR A . n A 1 133 GLN 133 352 352 GLN GLN A . n A 1 134 LEU 134 353 353 LEU LEU A . n A 1 135 PRO 135 354 354 PRO PRO A . n A 1 136 TYR 136 355 355 TYR TYR A . n A 1 137 VAL 137 356 356 VAL VAL A . n A 1 138 LEU 138 357 357 LEU LEU A . n A 1 139 GLY 139 358 358 GLY GLY A . n A 1 140 SER 140 359 359 SER SER A . n A 1 141 ALA 141 360 360 ALA ALA A . n A 1 142 HIS 142 361 361 HIS HIS A . n A 1 143 GLN 143 362 362 GLN GLN A . n A 1 144 GLY 144 363 363 GLY GLY A . n A 1 145 CYS 145 364 364 CYS CYS A . n A 1 146 LEU 146 365 365 LEU LEU A . n A 1 147 PRO 147 366 366 PRO PRO A . n A 1 148 PRO 148 367 367 PRO PRO A . n A 1 149 PHE 149 368 368 PHE PHE A . n A 1 150 PRO 150 369 369 PRO PRO A . n A 1 151 ALA 151 370 370 ALA ALA A . n A 1 152 ASP 152 371 371 ASP ASP A . n A 1 153 VAL 153 372 372 VAL VAL A . n A 1 154 PHE 154 373 373 PHE PHE A . n A 1 155 MET 155 374 374 MET MET A . n A 1 156 ILE 156 375 375 ILE ILE A . n A 1 157 PRO 157 376 376 PRO PRO A . n A 1 158 GLN 158 377 377 GLN GLN A . n A 1 159 TYR 159 378 378 TYR TYR A . n A 1 160 GLY 160 379 379 GLY GLY A . n A 1 161 TYR 161 380 380 TYR TYR A . n A 1 162 LEU 162 381 381 LEU LEU A . n A 1 163 THR 163 382 382 THR THR A . n A 1 164 LEU 164 383 383 LEU LEU A . n A 1 165 ASN 165 384 384 ASN ASN A . n A 1 166 ASN 166 385 385 ASN ASN A . n A 1 167 GLY 167 386 386 GLY GLY A . n A 1 168 SER 168 387 387 SER SER A . n A 1 169 GLN 169 388 388 GLN GLN A . n A 1 170 ALA 170 389 389 ALA ALA A . n A 1 171 VAL 171 390 390 VAL VAL A . n A 1 172 GLY 172 391 391 GLY GLY A . n A 1 173 ARG 173 392 392 ARG ARG A . n A 1 174 SER 174 393 393 SER SER A . n A 1 175 SER 175 394 394 SER SER A . n A 1 176 PHE 176 395 395 PHE PHE A . n A 1 177 TYR 177 396 396 TYR TYR A . n A 1 178 CYS 178 397 397 CYS CYS A . n A 1 179 LEU 179 398 398 LEU LEU A . n A 1 180 GLU 180 399 399 GLU GLU A . n A 1 181 TYR 181 400 400 TYR TYR A . n A 1 182 PHE 182 401 401 PHE PHE A . n A 1 183 PRO 183 402 402 PRO PRO A . n A 1 184 SER 184 403 403 SER SER A . n A 1 185 GLN 185 404 404 GLN GLN A . n A 1 186 MET 186 405 405 MET MET A . n A 1 187 LEU 187 406 406 LEU LEU A . n A 1 188 ARG 188 407 407 ARG ARG A . n A 1 189 THR 189 408 408 THR THR A . n A 1 190 GLY 190 409 409 GLY GLY A . n A 1 191 ASN 191 410 410 ASN ASN A . n A 1 192 ASN 192 411 411 ASN ASN A . n A 1 193 PHE 193 412 412 PHE PHE A . n A 1 194 GLN 194 413 413 GLN GLN A . n A 1 195 PHE 195 414 414 PHE PHE A . n A 1 196 THR 196 415 415 THR THR A . n A 1 197 TYR 197 416 416 TYR TYR A . n A 1 198 THR 198 417 417 THR THR A . n A 1 199 PHE 199 418 418 PHE PHE A . n A 1 200 GLU 200 419 419 GLU GLU A . n A 1 201 ASP 201 420 420 ASP ASP A . n A 1 202 VAL 202 421 421 VAL VAL A . n A 1 203 PRO 203 422 422 PRO PRO A . n A 1 204 PHE 204 423 423 PHE PHE A . n A 1 205 HIS 205 424 424 HIS HIS A . n A 1 206 SER 206 425 425 SER SER A . n A 1 207 SER 207 426 426 SER SER A . n A 1 208 TYR 208 427 427 TYR TYR A . n A 1 209 ALA 209 428 428 ALA ALA A . n A 1 210 HIS 210 429 429 HIS HIS A . n A 1 211 SER 211 430 430 SER SER A . n A 1 212 GLN 212 431 431 GLN GLN A . n A 1 213 SER 213 432 432 SER SER A . n A 1 214 LEU 214 433 433 LEU LEU A . n A 1 215 ASP 215 434 434 ASP ASP A . n A 1 216 ARG 216 435 435 ARG ARG A . n A 1 217 LEU 217 436 436 LEU LEU A . n A 1 218 MET 218 437 437 MET MET A . n A 1 219 ASN 219 438 438 ASN ASN A . n A 1 220 PRO 220 439 439 PRO PRO A . n A 1 221 LEU 221 440 440 LEU LEU A . n A 1 222 ILE 222 441 441 ILE ILE A . n A 1 223 ASP 223 442 442 ASP ASP A . n A 1 224 GLN 224 443 443 GLN GLN A . n A 1 225 TYR 225 444 444 TYR TYR A . n A 1 226 LEU 226 445 445 LEU LEU A . n A 1 227 TYR 227 446 446 TYR TYR A . n A 1 228 TYR 228 447 447 TYR TYR A . n A 1 229 LEU 229 448 448 LEU LEU A . n A 1 230 SER 230 449 449 SER SER A . n A 1 231 ARG 231 450 450 ARG ARG A . n A 1 232 THR 232 451 451 THR THR A . n A 1 233 GLN 233 452 452 GLN GLN A . n A 1 234 THR 234 453 453 THR THR A . n A 1 235 THR 235 454 454 THR THR A . n A 1 236 GLY 236 455 455 GLY GLY A . n A 1 237 GLY 237 456 456 GLY GLY A . n A 1 238 THR 238 457 457 THR THR A . n A 1 239 ALA 239 458 458 ALA ALA A . n A 1 240 ASN 240 459 459 ASN ASN A . n A 1 241 THR 241 460 460 THR THR A . n A 1 242 GLN 242 461 461 GLN GLN A . n A 1 243 THR 243 462 462 THR THR A . n A 1 244 LEU 244 463 463 LEU LEU A . n A 1 245 GLY 245 464 464 GLY GLY A . n A 1 246 PHE 246 465 465 PHE PHE A . n A 1 247 SER 247 466 466 SER SER A . n A 1 248 GLN 248 467 467 GLN GLN A . n A 1 249 GLY 249 468 468 GLY GLY A . n A 1 250 GLY 250 469 469 GLY GLY A . n A 1 251 PRO 251 470 470 PRO PRO A . n A 1 252 ASN 252 471 471 ASN ASN A . n A 1 253 THR 253 472 472 THR THR A . n A 1 254 MET 254 473 473 MET MET A . n A 1 255 ALA 255 474 474 ALA ALA A . n A 1 256 ASN 256 475 475 ASN ASN A . n A 1 257 GLN 257 476 476 GLN GLN A . n A 1 258 ALA 258 477 477 ALA ALA A . n A 1 259 LYS 259 478 478 LYS LYS A . n A 1 260 ASN 260 479 479 ASN ASN A . n A 1 261 TRP 261 480 480 TRP TRP A . n A 1 262 LEU 262 481 481 LEU LEU A . n A 1 263 PRO 263 482 482 PRO PRO A . n A 1 264 GLY 264 483 483 GLY GLY A . n A 1 265 PRO 265 484 484 PRO PRO A . n A 1 266 CYS 266 485 485 CYS CYS A . n A 1 267 TYR 267 486 486 TYR TYR A . n A 1 268 ARG 268 487 487 ARG ARG A . n A 1 269 GLN 269 488 488 GLN GLN A . n A 1 270 GLN 270 489 489 GLN GLN A . n A 1 271 ARG 271 490 490 ARG ARG A . n A 1 272 VAL 272 491 491 VAL VAL A . n A 1 273 SER 273 492 492 SER SER A . n A 1 274 THR 274 493 493 THR THR A . n A 1 275 THR 275 494 494 THR THR A . n A 1 276 THR 276 495 495 THR THR A . n A 1 277 GLY 277 496 496 GLY GLY A . n A 1 278 GLN 278 497 497 GLN GLN A . n A 1 279 ASN 279 498 498 ASN ASN A . n A 1 280 ASN 280 499 499 ASN ASN A . n A 1 281 ASN 281 500 500 ASN ASN A . n A 1 282 SER 282 501 501 SER SER A . n A 1 283 ASN 283 502 502 ASN ASN A . n A 1 284 PHE 284 503 503 PHE PHE A . n A 1 285 ALA 285 504 504 ALA ALA A . n A 1 286 TRP 286 505 505 TRP TRP A . n A 1 287 THR 287 506 506 THR THR A . n A 1 288 ALA 288 507 507 ALA ALA A . n A 1 289 GLY 289 508 508 GLY GLY A . n A 1 290 THR 290 509 509 THR THR A . n A 1 291 LYS 291 510 510 LYS LYS A . n A 1 292 TYR 292 511 511 TYR TYR A . n A 1 293 HIS 293 512 512 HIS HIS A . n A 1 294 LEU 294 513 513 LEU LEU A . n A 1 295 ASN 295 514 514 ASN ASN A . n A 1 296 GLY 296 515 515 GLY GLY A . n A 1 297 ARG 297 516 516 ARG ARG A . n A 1 298 ASN 298 517 517 ASN ASN A . n A 1 299 SER 299 518 518 SER SER A . n A 1 300 LEU 300 519 519 LEU LEU A . n A 1 301 ALA 301 520 520 ALA ALA A . n A 1 302 ASN 302 521 521 ASN ASN A . n A 1 303 PRO 303 522 522 PRO PRO A . n A 1 304 GLY 304 523 523 GLY GLY A . n A 1 305 ILE 305 524 524 ILE ILE A . n A 1 306 ALA 306 525 525 ALA ALA A . n A 1 307 MET 307 526 526 MET MET A . n A 1 308 ALA 308 527 527 ALA ALA A . n A 1 309 THR 309 528 528 THR THR A . n A 1 310 HIS 310 529 529 HIS HIS A . n A 1 311 LYS 311 530 530 LYS LYS A . n A 1 312 ASP 312 531 531 ASP ASP A . n A 1 313 ASP 313 532 532 ASP ASP A . n A 1 314 GLU 314 533 533 GLU GLU A . n A 1 315 GLU 315 534 534 GLU GLU A . n A 1 316 ARG 316 535 535 ARG ARG A . n A 1 317 PHE 317 536 536 PHE PHE A . n A 1 318 PHE 318 537 537 PHE PHE A . n A 1 319 PRO 319 538 538 PRO PRO A . n A 1 320 SER 320 539 539 SER SER A . n A 1 321 ASN 321 540 540 ASN ASN A . n A 1 322 GLY 322 541 541 GLY GLY A . n A 1 323 ILE 323 542 542 ILE ILE A . n A 1 324 LEU 324 543 543 LEU LEU A . n A 1 325 ILE 325 544 544 ILE ILE A . n A 1 326 PHE 326 545 545 PHE PHE A . n A 1 327 GLY 327 546 546 GLY GLY A . n A 1 328 LYS 328 547 547 LYS LYS A . n A 1 329 GLN 329 548 548 GLN GLN A . n A 1 330 ASN 330 549 549 ASN ASN A . n A 1 331 ALA 331 550 550 ALA ALA A . n A 1 332 ALA 332 551 551 ALA ALA A . n A 1 333 ARG 333 552 552 ARG ARG A . n A 1 334 ASP 334 553 553 ASP ASP A . n A 1 335 ASN 335 554 554 ASN ASN A . n A 1 336 ALA 336 555 555 ALA ALA A . n A 1 337 ASP 337 556 556 ASP ASP A . n A 1 338 TYR 338 557 557 TYR TYR A . n A 1 339 SER 339 558 558 SER SER A . n A 1 340 ASP 340 559 559 ASP ASP A . n A 1 341 VAL 341 560 560 VAL VAL A . n A 1 342 MET 342 561 561 MET MET A . n A 1 343 LEU 343 562 562 LEU LEU A . n A 1 344 THR 344 563 563 THR THR A . n A 1 345 SER 345 564 564 SER SER A . n A 1 346 GLU 346 565 565 GLU GLU A . n A 1 347 GLU 347 566 566 GLU GLU A . n A 1 348 GLU 348 567 567 GLU GLU A . n A 1 349 ILE 349 568 568 ILE ILE A . n A 1 350 LYS 350 569 569 LYS LYS A . n A 1 351 THR 351 570 570 THR THR A . n A 1 352 THR 352 571 571 THR THR A . n A 1 353 ASN 353 572 572 ASN ASN A . n A 1 354 PRO 354 573 573 PRO PRO A . n A 1 355 VAL 355 574 574 VAL VAL A . n A 1 356 ALA 356 575 575 ALA ALA A . n A 1 357 THR 357 576 576 THR THR A . n A 1 358 GLU 358 577 577 GLU GLU A . n A 1 359 GLU 359 578 578 GLU GLU A . n A 1 360 TYR 360 579 579 TYR TYR A . n A 1 361 GLY 361 580 580 GLY GLY A . n A 1 362 ILE 362 581 581 ILE ILE A . n A 1 363 VAL 363 582 582 VAL VAL A . n A 1 364 ALA 364 583 583 ALA ALA A . n A 1 365 ASP 365 584 584 ASP ASP A . n A 1 366 ASN 366 585 585 ASN ASN A . n A 1 367 LEU 367 586 586 LEU LEU A . n A 1 368 GLN 368 587 587 GLN GLN A . n A 1 369 GLN 369 588 588 GLN GLN A . n A 1 370 GLN 370 589 589 GLN GLN A . n A 1 371 ASN 371 590 590 ASN ASN A . n A 1 372 THR 372 591 591 THR THR A . n A 1 373 ALA 373 592 592 ALA ALA A . n A 1 374 PRO 374 593 593 PRO PRO A . n A 1 375 GLN 375 594 594 GLN GLN A . n A 1 376 ILE 376 595 595 ILE ILE A . n A 1 377 GLY 377 596 596 GLY GLY A . n A 1 378 THR 378 597 597 THR THR A . n A 1 379 VAL 379 598 598 VAL VAL A . n A 1 380 ASN 380 599 599 ASN ASN A . n A 1 381 SER 381 600 600 SER SER A . n A 1 382 GLN 382 601 601 GLN GLN A . n A 1 383 GLY 383 602 602 GLY GLY A . n A 1 384 ALA 384 603 603 ALA ALA A . n A 1 385 LEU 385 604 604 LEU LEU A . n A 1 386 PRO 386 605 605 PRO PRO A . n A 1 387 GLY 387 606 606 GLY GLY A . n A 1 388 MET 388 607 607 MET MET A . n A 1 389 VAL 389 608 608 VAL VAL A . n A 1 390 TRP 390 609 609 TRP TRP A . n A 1 391 GLN 391 610 610 GLN GLN A . n A 1 392 ASN 392 611 611 ASN ASN A . n A 1 393 ARG 393 612 612 ARG ARG A . n A 1 394 ASP 394 613 613 ASP ASP A . n A 1 395 VAL 395 614 614 VAL VAL A . n A 1 396 TYR 396 615 615 TYR TYR A . n A 1 397 LEU 397 616 616 LEU LEU A . n A 1 398 GLN 398 617 617 GLN GLN A . n A 1 399 GLY 399 618 618 GLY GLY A . n A 1 400 PRO 400 619 619 PRO PRO A . n A 1 401 ILE 401 620 620 ILE ILE A . n A 1 402 TRP 402 621 621 TRP TRP A . n A 1 403 ALA 403 622 622 ALA ALA A . n A 1 404 LYS 404 623 623 LYS LYS A . n A 1 405 ILE 405 624 624 ILE ILE A . n A 1 406 PRO 406 625 625 PRO PRO A . n A 1 407 HIS 407 626 626 HIS HIS A . n A 1 408 THR 408 627 627 THR THR A . n A 1 409 ASP 409 628 628 ASP ASP A . n A 1 410 GLY 410 629 629 GLY GLY A . n A 1 411 ASN 411 630 630 ASN ASN A . n A 1 412 PHE 412 631 631 PHE PHE A . n A 1 413 HIS 413 632 632 HIS HIS A . n A 1 414 PRO 414 633 633 PRO PRO A . n A 1 415 SER 415 634 634 SER SER A . n A 1 416 PRO 416 635 635 PRO PRO A . n A 1 417 LEU 417 636 636 LEU LEU A . n A 1 418 MET 418 637 637 MET MET A . n A 1 419 GLY 419 638 638 GLY GLY A . n A 1 420 GLY 420 639 639 GLY GLY A . n A 1 421 PHE 421 640 640 PHE PHE A . n A 1 422 GLY 422 641 641 GLY GLY A . n A 1 423 LEU 423 642 642 LEU LEU A . n A 1 424 LYS 424 643 643 LYS LYS A . n A 1 425 HIS 425 644 644 HIS HIS A . n A 1 426 PRO 426 645 645 PRO PRO A . n A 1 427 PRO 427 646 646 PRO PRO A . n A 1 428 PRO 428 647 647 PRO PRO A . n A 1 429 GLN 429 648 648 GLN GLN A . n A 1 430 ILE 430 649 649 ILE ILE A . n A 1 431 LEU 431 650 650 LEU LEU A . n A 1 432 ILE 432 651 651 ILE ILE A . n A 1 433 LYS 433 652 652 LYS LYS A . n A 1 434 ASN 434 653 653 ASN ASN A . n A 1 435 THR 435 654 654 THR THR A . n A 1 436 PRO 436 655 655 PRO PRO A . n A 1 437 VAL 437 656 656 VAL VAL A . n A 1 438 PRO 438 657 657 PRO PRO A . n A 1 439 ALA 439 658 658 ALA ALA A . n A 1 440 ASP 440 659 659 ASP ASP A . n A 1 441 PRO 441 660 660 PRO PRO A . n A 1 442 PRO 442 661 661 PRO PRO A . n A 1 443 THR 443 662 662 THR THR A . n A 1 444 THR 444 663 663 THR THR A . n A 1 445 PHE 445 664 664 PHE PHE A . n A 1 446 ASN 446 665 665 ASN ASN A . n A 1 447 GLN 447 666 666 GLN GLN A . n A 1 448 SER 448 667 667 SER SER A . n A 1 449 LYS 449 668 668 LYS LYS A . n A 1 450 LEU 450 669 669 LEU LEU A . n A 1 451 ASN 451 670 670 ASN ASN A . n A 1 452 SER 452 671 671 SER SER A . n A 1 453 PHE 453 672 672 PHE PHE A . n A 1 454 ILE 454 673 673 ILE ILE A . n A 1 455 THR 455 674 674 THR THR A . n A 1 456 GLN 456 675 675 GLN GLN A . n A 1 457 TYR 457 676 676 TYR TYR A . n A 1 458 SER 458 677 677 SER SER A . n A 1 459 THR 459 678 678 THR THR A . n A 1 460 GLY 460 679 679 GLY GLY A . n A 1 461 GLN 461 680 680 GLN GLN A . n A 1 462 VAL 462 681 681 VAL VAL A . n A 1 463 SER 463 682 682 SER SER A . n A 1 464 VAL 464 683 683 VAL VAL A . n A 1 465 GLU 465 684 684 GLU GLU A . n A 1 466 ILE 466 685 685 ILE ILE A . n A 1 467 GLU 467 686 686 GLU GLU A . n A 1 468 TRP 468 687 687 TRP TRP A . n A 1 469 GLU 469 688 688 GLU GLU A . n A 1 470 LEU 470 689 689 LEU LEU A . n A 1 471 GLN 471 690 690 GLN GLN A . n A 1 472 LYS 472 691 691 LYS LYS A . n A 1 473 GLU 473 692 692 GLU GLU A . n A 1 474 ASN 474 693 693 ASN ASN A . n A 1 475 SER 475 694 694 SER SER A . n A 1 476 LYS 476 695 695 LYS LYS A . n A 1 477 ARG 477 696 696 ARG ARG A . n A 1 478 TRP 478 697 697 TRP TRP A . n A 1 479 ASN 479 698 698 ASN ASN A . n A 1 480 PRO 480 699 699 PRO PRO A . n A 1 481 GLU 481 700 700 GLU GLU A . n A 1 482 ILE 482 701 701 ILE ILE A . n A 1 483 GLN 483 702 702 GLN GLN A . n A 1 484 TYR 484 703 703 TYR TYR A . n A 1 485 THR 485 704 704 THR THR A . n A 1 486 SER 486 705 705 SER SER A . n A 1 487 ASN 487 706 706 ASN ASN A . n A 1 488 TYR 488 707 707 TYR TYR A . n A 1 489 TYR 489 708 708 TYR TYR A . n A 1 490 LYS 490 709 709 LYS LYS A . n A 1 491 SER 491 710 710 SER SER A . n A 1 492 THR 492 711 711 THR THR A . n A 1 493 SER 493 712 712 SER SER A . n A 1 494 VAL 494 713 713 VAL VAL A . n A 1 495 ASP 495 714 714 ASP ASP A . n A 1 496 PHE 496 715 715 PHE PHE A . n A 1 497 ALA 497 716 716 ALA ALA A . n A 1 498 VAL 498 717 717 VAL VAL A . n A 1 499 ASN 499 718 718 ASN ASN A . n A 1 500 THR 500 719 719 THR THR A . n A 1 501 GLU 501 720 720 GLU GLU A . n A 1 502 GLY 502 721 721 GLY GLY A . n A 1 503 VAL 503 722 722 VAL VAL A . n A 1 504 TYR 504 723 723 TYR TYR A . n A 1 505 SER 505 724 724 SER SER A . n A 1 506 GLU 506 725 725 GLU GLU A . n A 1 507 PRO 507 726 726 PRO PRO A . n A 1 508 ARG 508 727 727 ARG ARG A . n A 1 509 PRO 509 728 728 PRO PRO A . n A 1 510 ILE 510 729 729 ILE ILE A . n A 1 511 GLY 511 730 730 GLY GLY A . n A 1 512 THR 512 731 731 THR THR A . n A 1 513 ARG 513 732 732 ARG ARG A . n A 1 514 TYR 514 733 733 TYR TYR A . n A 1 515 LEU 515 734 734 LEU LEU A . n A 1 516 THR 516 735 735 THR THR A . n A 1 517 ARG 517 736 736 ARG ARG A . n A 1 518 ASN 518 737 737 ASN ASN A . n A 1 519 LEU 519 738 738 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A 1 1 1 A ADE A . C 3 HOH 1 2 2 HOH TIP A . C 3 HOH 2 3 3 HOH TIP A . C 3 HOH 3 4 4 HOH TIP A . C 3 HOH 4 5 5 HOH TIP A . C 3 HOH 5 6 6 HOH TIP A . C 3 HOH 6 7 7 HOH TIP A . C 3 HOH 7 8 8 HOH TIP A . C 3 HOH 8 9 9 HOH TIP A . C 3 HOH 9 10 10 HOH TIP A . C 3 HOH 10 11 11 HOH TIP A . C 3 HOH 11 12 12 HOH TIP A . C 3 HOH 12 13 13 HOH TIP A . C 3 HOH 13 14 14 HOH TIP A . C 3 HOH 14 15 15 HOH TIP A . C 3 HOH 15 16 16 HOH TIP A . C 3 HOH 16 17 17 HOH TIP A . C 3 HOH 17 18 18 HOH TIP A . C 3 HOH 18 19 19 HOH TIP A . C 3 HOH 19 20 20 HOH TIP A . C 3 HOH 20 21 21 HOH TIP A . C 3 HOH 21 22 22 HOH TIP A . C 3 HOH 22 23 23 HOH TIP A . C 3 HOH 23 24 24 HOH TIP A . C 3 HOH 24 25 25 HOH TIP A . C 3 HOH 25 26 26 HOH TIP A . C 3 HOH 26 27 27 HOH TIP A . C 3 HOH 27 28 28 HOH TIP A . C 3 HOH 28 29 29 HOH TIP A . C 3 HOH 29 30 30 HOH TIP A . C 3 HOH 30 31 31 HOH TIP A . C 3 HOH 31 32 32 HOH TIP A . C 3 HOH 32 33 33 HOH TIP A . C 3 HOH 33 34 34 HOH TIP A . C 3 HOH 34 35 35 HOH TIP A . C 3 HOH 35 36 36 HOH TIP A . C 3 HOH 36 37 37 HOH TIP A . C 3 HOH 37 38 38 HOH TIP A . C 3 HOH 38 39 39 HOH TIP A . C 3 HOH 39 40 40 HOH TIP A . C 3 HOH 40 41 41 HOH TIP A . C 3 HOH 41 42 42 HOH TIP A . C 3 HOH 42 43 43 HOH TIP A . C 3 HOH 43 44 44 HOH TIP A . C 3 HOH 44 45 45 HOH TIP A . C 3 HOH 45 46 46 HOH TIP A . C 3 HOH 46 47 47 HOH TIP A . C 3 HOH 47 48 48 HOH TIP A . C 3 HOH 48 49 49 HOH TIP A . C 3 HOH 49 50 50 HOH TIP A . C 3 HOH 50 51 51 HOH TIP A . C 3 HOH 51 52 52 HOH TIP A . C 3 HOH 52 53 53 HOH TIP A . C 3 HOH 53 54 54 HOH TIP A . C 3 HOH 54 55 55 HOH TIP A . C 3 HOH 55 56 56 HOH TIP A . C 3 HOH 56 57 57 HOH TIP A . C 3 HOH 57 58 58 HOH TIP A . C 3 HOH 58 59 59 HOH TIP A . C 3 HOH 59 60 60 HOH TIP A . C 3 HOH 60 61 61 HOH TIP A . C 3 HOH 61 62 62 HOH TIP A . C 3 HOH 62 63 63 HOH TIP A . C 3 HOH 63 64 64 HOH TIP A . C 3 HOH 64 65 65 HOH TIP A . C 3 HOH 65 66 66 HOH TIP A . C 3 HOH 66 67 67 HOH TIP A . C 3 HOH 67 68 68 HOH TIP A . C 3 HOH 68 69 69 HOH TIP A . C 3 HOH 69 70 70 HOH TIP A . C 3 HOH 70 71 71 HOH TIP A . C 3 HOH 71 72 72 HOH TIP A . C 3 HOH 72 73 73 HOH TIP A . C 3 HOH 73 74 74 HOH TIP A . C 3 HOH 74 75 75 HOH TIP A . C 3 HOH 75 76 76 HOH TIP A . C 3 HOH 76 77 77 HOH TIP A . C 3 HOH 77 78 78 HOH TIP A . C 3 HOH 78 79 79 HOH TIP A . C 3 HOH 79 80 80 HOH TIP A . C 3 HOH 80 81 81 HOH TIP A . C 3 HOH 81 82 82 HOH TIP A . C 3 HOH 82 83 83 HOH TIP A . C 3 HOH 83 84 84 HOH TIP A . C 3 HOH 84 85 85 HOH TIP A . C 3 HOH 85 739 1 HOH TIP A . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns-online.org/ Fortran_77 ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 4 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 5 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 6 AMoRE . ? ? ? ? phasing ? ? ? # _cell.length_a 257.940 _cell.length_b 257.940 _cell.length_c 448.690 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 3RA8 _cell.pdbx_unique_axis ? _cell.Z_PDB 120 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 63 2 2' _symmetry.entry_id 3RA8 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 182 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 4 _exptl.entry_id 3RA8 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews ? _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;20 mM Tris pH 7.5, 4% PEG 8000, 1M NaCl. Crystals presoaked in pH 5.5 cryosolvent for 24 hours before data collection, VAPOR DIFFUSION, HANGING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 113 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 300 mm plate' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Si 111' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.00 _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID # _reflns.entry_id 3RA8 _reflns.observed_criterion_sigma_F 1 _reflns.observed_criterion_sigma_I 1 _reflns.d_resolution_high 2.7 _reflns.d_resolution_low 40 _reflns.number_all 238727 _reflns.number_obs 185894 _reflns.percent_possible_obs 77.9 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.7 _reflns_shell.d_res_low 2.8 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 57.4 _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3RA8 _refine.ls_d_res_high 2.7000 _refine.ls_d_res_low 40.0000 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 77.9000 _refine.ls_number_reflns_obs 185894 _refine.ls_number_reflns_all 238727 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.246 _refine.ls_R_factor_R_work 0.2454 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2504 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 3.8000 _refine.ls_number_reflns_R_free 9148 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 38.1277 _refine.solvent_model_param_bsol 30.3674 _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 7.8670 _refine.aniso_B[2][2] 7.8670 _refine.aniso_B[3][3] -15.7350 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 103.140 _refine.B_iso_min 9.780 _refine.occupancy_max 1.000 _refine.occupancy_min 0.700 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4136 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 23 _refine_hist.number_atoms_solvent 85 _refine_hist.number_atoms_total 4244 _refine_hist.d_res_high 2.7000 _refine_hist.d_res_low 40.0000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id c_mcbond_it ? 1.035 1.500 ? ? 'X-RAY DIFFRACTION' c_scbond_it ? 1.694 2.000 ? ? 'X-RAY DIFFRACTION' c_mcangle_it ? 1.825 2.000 ? ? 'X-RAY DIFFRACTION' c_scangle_it ? 2.676 2.500 ? ? 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 CNS_TOPPAR:protein_rep.param ? 'X-RAY DIFFRACTION' 2 CNS_TOPPAR:dna-rna_rep.param ? 'X-RAY DIFFRACTION' 3 CNS_TOPPAR:water_rep.param ? 'X-RAY DIFFRACTION' 4 CNS_TOPPAR:ion.param ? 'X-RAY DIFFRACTION' 5 CNS_TOPPAR:carbohydrate.param ? 'X-RAY DIFFRACTION' # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.details _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.vector[2] _struct_ncs_oper.vector[3] 1 given ? 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 2 generate ? 0.563440 0.754700 0.336100 -0.756060 0.307040 0.578020 0.333040 -0.579790 0.743590 74.86510 -18.83430 -57.54900 3 generate ? -0.141370 0.463170 0.874920 -0.468430 -0.809890 0.353060 0.872120 -0.359930 0.331460 83.52370 -114.09670 -64.55450 4 generate ? -0.147000 -0.470880 0.869860 0.467040 -0.808250 -0.358610 0.871930 0.353550 0.338740 15.19600 -154.61000 -11.77000 5 generate ? 0.561010 -0.758900 0.330650 0.757350 0.309280 -0.575130 0.334200 0.573070 0.748260 -36.95900 -84.26700 27.76400 6 generate ? 0.642820 0.755080 0.128970 0.179540 -0.312190 0.932900 0.744680 -0.576530 -0.336250 87.97800 -225.66000 10.95100 7 generate ? -0.167710 0.641890 0.748230 0.643670 -0.503580 0.576280 0.746700 0.578260 -0.328710 114.40440 -259.40659 95.93890 8 generate ? -0.333520 -0.361950 0.870490 0.934240 -0.003180 0.356630 -0.126310 0.932190 0.339210 47.02510 -234.97540 159.98840 9 generate ? 0.370210 -0.868410 0.329860 0.645920 0.495840 0.580450 -0.667630 -0.001828 0.744490 -20.64100 -185.92999 114.34000 10 generate ? 0.975760 -0.178030 -0.127250 0.177510 0.303850 0.936040 -0.127980 -0.935940 0.328090 4.27440 -179.83000 21.97600 # _struct.entry_id 3RA8 _struct.title 'Structural studies of AAV8 capsid transitions associated with endosomal trafficking' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3RA8 _struct_keywords.pdbx_keywords VIRUS _struct_keywords.text 'Beta Barrel, Viral Capsid, Virus' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8JQF8_9VIRU _struct_ref.pdbx_db_accession Q8JQF8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DGVGSSSGNWHCDSTWLGDRVITTSTRTWALPTYNNHLYKQISNGTSGGATNDNTYFGYSTPWGYFDFNRFHCHFSPRDW QRLINNNWGFRPKRLSFKLFNIQVKEVTQNEGTKTIANNLTSTIQVFTDSEYQLPYVLGSAHQGCLPPFPADVFMIPQYG YLTLNNGSQAVGRSSFYCLEYFPSQMLRTGNNFQFTYTFEDVPFHSSYAHSQSLDRLMNPLIDQYLYYLSRTQTTGGTAN TQTLGFSQGGPNTMANQAKNWLPGPCYRQQRVSTTTGQNNNSNFAWTAGTKYHLNGRNSLANPGIAMATHKDDEERFFPS NGILIFGKQNAARDNADYSDVMLTSEEEIKTTNPVATEEYGIVADNLQQQNTAPQIGTVNSQGALPGMVWQNRDVYLQGP IWAKIPHTDGNFHPSPLMGGFGLKHPPPQILIKNTPVPADPPTTFNQSKLNSFITQYSTGQVSVEIEWELQKENSKRWNP EIQYTSNYYKSTSVDFAVNTEGVYSEPRPIGTRYLTRNL ; _struct_ref.pdbx_align_begin 220 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3RA8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 519 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8JQF8 _struct_ref_seq.db_align_beg 220 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 738 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 220 _struct_ref_seq.pdbx_auth_seq_align_end 738 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 'complete icosahedral assembly' ? 60-MERIC 60 2 'icosahedral asymmetric unit' ? monomeric 1 3 'icosahedral pentamer' ? pentameric 5 4 'icosahedral 23 hexamer' ? hexameric 6 5 'icosahedral asymmetric unit, std point frame' ? monomeric 1 6 'crystal asymmetric unit, crystal frame' ? decameric 10 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 '(1-60)' A,B,C 2 1 A,B,C 3 '(1-5)' A,B,C 4 '(1,2,6,10,23,24)' A,B,C 5 P A,B,C 6 '(X0)(1-5,21-25)' A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] P 'transform to point frame' ? ? -0.46709053 -0.80901546 0.35681987 -40.02477 -0.86602343 0.50000341 -0.00000241 148.92227 -0.17840920 -0.30901549 -0.93417321 104.78814 X0 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 1 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 2 'point symmetry operation' ? ? 0.56365882 0.75576192 0.33333566 75.15887 -0.75576449 0.30901699 0.57734611 -18.74254 0.33332981 -0.57734948 0.74535818 -57.41595 3 'point symmetry operation' ? ? -0.14235605 0.46708398 0.87267825 84.21915 -0.46709072 -0.80901699 0.35681615 -114.48558 0.87267462 -0.35682497 0.33333905 -64.33771 4 'point symmetry operation' ? ? -0.14235604 -0.46709072 0.87267464 14.65984 0.46708398 -0.80901699 -0.35682497 -154.91550 0.87267824 0.35681614 0.33333905 -11.19964 5 'point symmetry operation' ? ? 0.56365882 -0.75576450 0.33332982 -37.39046 0.75576191 0.30901700 -0.57734948 -84.15952 0.33333566 0.57734610 0.74535817 28.56325 6 'point symmetry operation' ? ? -0.93634031 0.11026241 0.33333020 220.54997 0.11026241 -0.80901885 0.57734799 -213.68460 0.33333019 0.57734798 0.74535916 28.56398 7 'point symmetry operation' ? ? -0.50000000 -0.86602541 -0.00000565 128.97062 0.86602540 -0.50000000 0.00000156 -223.38332 -0.00000417 -0.00000412 1.00000000 0.00023 8 'point symmetry operation' ? ? 0.37267996 -0.64549426 -0.66666844 107.62303 0.86602562 0.49999962 0.00000525 -148.92264 0.33333058 -0.57735390 0.74535441 -57.41595 9 'point symmetry operation' ? ? 0.47568552 0.46708930 -0.74535286 186.00884 0.11026276 0.80901453 0.57735397 -93.20470 0.87267714 -0.35682359 0.33333394 -64.33736 10 'point symmetry operation' ? ? -0.33333350 0.93417262 -0.12731971 255.80153 -0.35682458 -0.00000338 0.93417141 -133.22979 0.87267690 0.35682143 0.33333688 -11.19883 11 'point symmetry operation' ? ? 0.49999318 -0.86602935 0.00000417 -0.00005 -0.86602934 -0.49999318 -0.00000241 0.00100 0.00000417 -0.00000241 -1.00000000 224.34381 12 'point symmetry operation' ? ? 0.93634118 0.11025561 -0.33333001 53.81023 -0.11026878 -0.80901699 -0.57734938 -55.71750 -0.33332564 0.57735189 -0.74535818 281.76012 13 'point symmetry operation' ? ? 0.33334086 0.93416977 0.12732131 141.25656 0.35682458 -0.00000459 -0.93417141 -15.69308 -0.87267409 0.35682887 -0.33333627 288.68215 14 'point symmetry operation' ? ? -0.47568184 0.46709177 0.74535366 141.49109 -0.11025640 0.80901639 -0.57735259 64.76187 -0.87267995 -0.35681614 -0.33333455 235.54389 15 'point symmetry operation' ? ? -0.37268504 -0.64549247 0.66666734 54.18971 -0.86602168 0.50000644 -0.00000440 74.46135 -0.33333513 -0.57735000 -0.74535539 195.78061 16 'point symmetry operation' ? ? -0.56365287 0.75576693 -0.33333437 295.33069 0.75576692 0.30901203 -0.57734558 -84.16097 -0.33333436 -0.57734557 -0.74535916 195.78126 17 'point symmetry operation' ? ? -1.00000000 0.00000788 0.00000000 257.94089 0.00000787 1.00000000 0.00000171 -0.00121 0.00000000 0.00000172 -1.00000000 224.34466 18 'point symmetry operation' ? ? -0.56366477 -0.75575949 -0.33333111 182.78188 -0.75575948 0.30902196 0.57735001 -18.74326 -0.33333111 0.57735001 -0.74535719 281.76057 19 'point symmetry operation' ? ? 0.14235237 -0.46709035 -0.87267544 173.72085 -0.46709035 -0.80901393 0.35682359 -114.48624 -0.87267543 0.35682359 -0.33333844 288.68217 20 'point symmetry operation' ? ? 0.14235972 0.46708435 -0.87267745 243.27984 0.46708435 -0.80902006 -0.35681753 -154.91661 -0.87267743 -0.35681753 -0.33333966 235.54403 21 'point symmetry operation' ? ? 0.64235115 0.75575935 0.12732953 88.11789 0.17840360 -0.30902098 0.93417247 -225.26818 0.74535706 -0.57735071 -0.33333017 10.44366 22 'point symmetry operation' ? ? -0.16666647 0.64549338 0.74535937 114.92068 0.64549338 -0.50000607 0.57734931 -259.70412 0.74535936 0.57734930 -0.33332746 96.42334 23 'point symmetry operation' ? ? -0.33333350 -0.35682459 0.87267692 47.50051 0.93417261 -0.00000338 0.35682143 -234.96725 -0.12731971 0.93417140 0.33333688 160.76102 24 'point symmetry operation' ? ? 0.37267822 -0.86602519 0.33333365 -20.97023 0.64549640 0.50000037 0.57735086 -185.24307 -0.66666733 -0.00000042 0.74535540 114.54422 25 'point symmetry operation' ? ? 0.97568450 -0.17841050 -0.12731637 4.13269 0.17840547 0.30901699 0.93417343 -179.24871 -0.12732342 -0.93417246 0.33333250 21.64298 26 'point symmetry operation' ? ? -0.47568465 -0.46708293 0.74535741 71.93132 0.11026800 0.80901760 0.57734867 -93.20456 -0.87267696 0.35682497 -0.33333295 288.68185 27 'point symmetry operation' ? ? 0.33333069 -0.93417262 0.12732707 2.13832 -0.35682572 0.00000459 0.93417098 -133.22901 -0.87267751 -0.35682143 -0.33333528 235.54326 28 'point symmetry operation' ? ? 0.93634118 -0.11026879 -0.33332565 37.38924 0.11025561 -0.80901700 0.57735189 -213.68402 -0.33333000 -0.57734937 -0.74535817 195.78031 29 'point symmetry operation' ? ? 0.50000682 0.86602147 0.00000565 128.96851 0.86602146 -0.50000682 0.00000326 -223.38351 0.00000566 0.00000327 -1.00000000 224.34404 30 'point symmetry operation' ? ? -0.37267314 0.64549820 0.66666844 150.31669 0.86602912 0.49999356 0.00000128 -148.92310 -0.33332909 0.57735476 -0.74535441 281.76036 31 'point symmetry operation' ? ? -0.33333805 -0.93416977 -0.12732867 116.68421 0.35682572 0.00000338 -0.93417098 -15.69268 0.87267471 -0.35682887 0.33333467 -64.33752 32 'point symmetry operation' ? ? 0.47568097 -0.46708540 -0.74535821 116.45031 -0.11026163 0.80901946 -0.57734729 64.76218 0.87267976 0.35681753 0.33333356 -11.19912 33 'point symmetry operation' ? ? 0.37267822 0.64549641 -0.66666734 203.75177 -0.86602518 0.50000038 -0.00000042 74.46091 0.33333364 0.57735086 0.74535539 28.56418 34 'point symmetry operation' ? ? -0.50000000 0.86602541 -0.00000417 257.94094 -0.86602540 -0.50000000 -0.00000412 0.00018 -0.00000566 0.00000155 1.00000000 0.00084 35 'point symmetry operation' ? ? -0.93634205 -0.11026198 0.33332546 204.13023 -0.11026198 -0.80901514 -0.57735327 -55.71780 0.33332545 -0.57735327 0.74535719 -57.41556 36 'point symmetry operation' ? ? 0.16667155 0.64549335 -0.74535827 239.14719 -0.64549732 -0.50000000 -0.57735016 36.32085 -0.74535481 0.57735460 0.33332845 213.90107 37 'point symmetry operation' ? ? -0.64234520 0.75576463 -0.12732823 282.37131 -0.17840604 -0.30901797 -0.93417299 30.32638 -0.74536161 -0.57734541 0.33332918 127.92158 38 'point symmetry operation' ? ? -0.97568590 -0.17840304 0.12731607 227.23909 -0.17840304 0.30902000 -0.93417290 76.34580 0.12731607 -0.93417289 -0.33333410 63.58355 39 'point symmetry operation' ? ? -0.37268504 -0.86602169 -0.33333513 149.94139 -0.64549246 0.50000645 -0.57735001 110.78183 0.66666733 -0.00000439 -0.74535540 109.79995 40 'point symmetry operation' ? ? 0.33333069 -0.35682572 -0.87267753 157.30101 -0.93417261 0.00000459 -0.35682143 86.04505 0.12732706 0.93417097 -0.33333528 202.70128 41 'point symmetry operation' ? ? 0.64235115 0.17840360 0.74535707 -24.19823 0.75575935 -0.30902098 -0.57735071 -130.17886 0.12732952 0.93417246 -0.33333017 202.70050 42 'point symmetry operation' ? ? 0.47568552 0.11026276 0.87267716 -22.05896 0.46708929 0.80901453 -0.35682359 -34.43586 -0.74535285 0.57735397 0.33333394 213.90015 43 'point symmetry operation' ? ? 0.47568097 -0.11026163 0.87267978 -38.47917 -0.46708540 0.80901945 0.35681753 5.99442 -0.74535819 -0.57734728 0.33333356 127.92051 44 'point symmetry operation' ? ? 0.64234379 -0.17841237 0.74536132 -50.76668 -0.75576706 -0.30901301 0.57734488 -64.76129 0.12732087 -0.93417342 -0.33333078 63.58252 45 'point symmetry operation' ? ? 0.74535162 -0.00000745 0.66667156 -41.94057 -0.00000744 -1.00000000 -0.00000284 -148.92100 0.66667154 -0.00000284 -0.74535162 109.79910 46 'point symmetry operation' ? ? -0.33333805 0.35682572 0.87267472 100.64056 -0.93416976 0.00000338 -0.35682887 86.04543 -0.12732867 -0.93417097 0.33333467 21.64352 47 'point symmetry operation' ? ? -0.16667663 -0.64549729 0.74535372 18.79399 -0.64549728 -0.49999393 -0.57735546 36.32189 0.74535371 -0.57735546 -0.33332944 10.44365 48 'point symmetry operation' ? ? 0.64234379 -0.75576707 0.12732088 -24.43017 -0.17841237 -0.30901301 -0.93417343 30.32762 0.74536130 0.57734488 -0.33333078 96.42313 49 'point symmetry operation' ? ? 0.97568449 0.17840547 -0.12732343 30.70241 -0.17841050 0.30901700 -0.93417247 76.34649 -0.12731637 0.93417342 0.33333250 160.76124 50 'point symmetry operation' ? ? 0.37267996 0.86602562 0.33333058 108.00037 -0.64549426 0.49999963 -0.57735391 110.78199 -0.66666843 0.00000525 0.74535441 114.54489 51 'point symmetry operation' ? ? 0.16667155 -0.64549732 -0.74535482 143.01817 0.64549334 -0.50000000 0.57735461 -259.70426 -0.74535825 -0.57735016 0.33332845 127.92087 52 'point symmetry operation' ? ? 0.33334086 0.35682459 -0.87267411 210.43853 0.93416976 -0.00000459 0.35682887 -234.96780 0.12732131 -0.93417140 -0.33333627 63.58323 53 'point symmetry operation' ? ? -0.37267314 0.86602913 -0.33332910 278.90966 0.64549820 0.49999355 0.57735476 -185.24424 0.66666843 0.00000128 -0.74535441 109.80012 54 'point symmetry operation' ? ? -0.97568309 0.17841294 0.12732373 253.80679 0.17841293 0.30901399 0.93417299 -179.24985 0.12732373 0.93417299 -0.33333090 202.70137 55 'point symmetry operation' ? ? -0.64234974 -0.75576179 -0.12732217 169.82123 0.17840993 -0.30901602 0.93417290 -225.26867 -0.74535676 0.57735018 0.33333177 213.90061 56 'point symmetry operation' ? ? -0.47568465 0.11026801 -0.87267697 296.42011 -0.46708293 0.80901760 0.35682497 5.99312 0.74535739 0.57734867 -0.33333295 96.42416 57 'point symmetry operation' ? ? -0.64234974 0.17840994 -0.74535677 308.70706 -0.75576178 -0.30901601 0.57735018 -64.76279 -0.12732217 0.93417289 0.33333177 160.76202 58 'point symmetry operation' ? ? -0.74535162 -0.00000043 -0.66667156 299.88029 -0.00000043 -1.00000000 0.00000113 -148.92235 -0.66667154 0.00000113 0.74535162 114.54530 59 'point symmetry operation' ? ? -0.64234519 -0.17840603 -0.74536162 282.13810 0.75576462 -0.30901798 -0.57734541 -130.17991 -0.12732823 -0.93417299 0.33332918 21.64393 60 'point symmetry operation' ? ? -0.47568184 -0.11025639 -0.87267997 279.99959 0.46709177 0.80901639 -0.35681615 -34.43688 0.74535365 -0.57735258 -0.33333455 10.44445 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TYR A 34 ? LEU A 38 ? TYR A 253 LEU A 257 5 ? 5 HELX_P HELX_P2 2 THR A 51 ? THR A 55 ? THR A 270 THR A 274 5 ? 5 HELX_P HELX_P3 3 ARG A 70 ? HIS A 74 ? ARG A 289 HIS A 293 5 ? 5 HELX_P HELX_P4 4 SER A 76 ? ASN A 86 ? SER A 295 ASN A 305 1 ? 11 HELX_P HELX_P5 5 CYS A 178 ? PHE A 182 ? CYS A 397 PHE A 401 5 ? 5 HELX_P HELX_P6 6 SER A 213 ? LEU A 217 ? SER A 432 LEU A 436 5 ? 5 HELX_P HELX_P7 7 GLY A 250 ? GLN A 257 ? GLY A 469 GLN A 476 5 ? 8 HELX_P HELX_P8 8 THR A 275 ? ASN A 279 ? THR A 494 ASN A 498 5 ? 5 HELX_P HELX_P9 9 ASP A 337 ? SER A 339 ? ASP A 556 SER A 558 5 ? 3 HELX_P HELX_P10 10 GLU A 346 ? LYS A 350 ? GLU A 565 LYS A 569 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASN _struct_mon_prot_cis.label_seq_id 302 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASN _struct_mon_prot_cis.auth_seq_id 521 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 303 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 522 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.08 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? C ? 5 ? D ? 3 ? E ? 5 ? F ? 2 ? G ? 2 ? H ? 2 ? I ? 2 ? J ? 2 ? K ? 2 ? L ? 2 ? M ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel E 4 5 ? anti-parallel F 1 2 ? parallel G 1 2 ? anti-parallel H 1 2 ? anti-parallel I 1 2 ? anti-parallel J 1 2 ? anti-parallel K 1 2 ? anti-parallel L 1 2 ? anti-parallel M 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 205 ? SER A 206 ? HIS A 424 SER A 425 A 2 ASN A 87 ? ASN A 110 ? ASN A 306 ASN A 329 A 3 GLN A 456 ? LYS A 472 ? GLN A 675 LYS A 691 A 4 ARG A 20 ? LEU A 31 ? ARG A 239 LEU A 250 A 5 ASP A 13 ? TRP A 16 ? ASP A 232 TRP A 235 B 1 THR A 113 ? ASN A 118 ? THR A 332 ASN A 337 B 2 ASN A 87 ? ASN A 110 ? ASN A 306 ASN A 329 B 3 GLN A 456 ? LYS A 472 ? GLN A 675 LYS A 691 B 4 ARG A 20 ? LEU A 31 ? ARG A 239 LEU A 250 B 5 VAL A 153 ? MET A 155 ? VAL A 372 MET A 374 C 1 ASP A 13 ? TRP A 16 ? ASP A 232 TRP A 235 C 2 ARG A 20 ? LEU A 31 ? ARG A 239 LEU A 250 C 3 GLN A 456 ? LYS A 472 ? GLN A 675 LYS A 691 C 4 ASN A 87 ? ASN A 110 ? ASN A 306 ASN A 329 C 5 PHE A 193 ? THR A 198 ? PHE A 412 THR A 417 D 1 LYS A 40 ? ASN A 44 ? LYS A 259 ASN A 263 D 2 TYR A 56 ? PHE A 66 ? TYR A 275 PHE A 285 D 3 GLN A 158 ? THR A 163 ? GLN A 377 THR A 382 E 1 LYS A 40 ? ASN A 44 ? LYS A 259 ASN A 263 E 2 TYR A 56 ? PHE A 66 ? TYR A 275 PHE A 285 E 3 ILE A 430 ? ASN A 434 ? ILE A 649 ASN A 653 E 4 ILE A 124 ? THR A 128 ? ILE A 343 THR A 347 E 5 GLN A 185 ? LEU A 187 ? GLN A 404 LEU A 406 F 1 TYR A 208 ? HIS A 210 ? TYR A 427 HIS A 429 F 2 LEU A 515 ? ARG A 517 ? LEU A 734 ARG A 736 G 1 TYR A 227 ? GLN A 233 ? TYR A 446 GLN A 452 G 2 GLN A 242 ? GLN A 248 ? GLN A 461 GLN A 467 H 1 CYS A 266 ? TYR A 267 ? CYS A 485 TYR A 486 H 2 SER A 381 ? GLN A 382 ? SER A 600 GLN A 601 I 1 ARG A 271 ? SER A 273 ? ARG A 490 SER A 492 I 2 PHE A 317 ? PRO A 319 ? PHE A 536 PRO A 538 J 1 LYS A 291 ? LEU A 294 ? LYS A 510 LEU A 513 J 2 ARG A 297 ? LEU A 300 ? ARG A 516 LEU A 519 K 1 ILE A 325 ? GLY A 327 ? ILE A 544 GLY A 546 K 2 VAL A 341 ? LEU A 343 ? VAL A 560 LEU A 562 L 1 GLY A 361 ? ALA A 364 ? GLY A 580 ALA A 583 L 2 ILE A 376 ? VAL A 379 ? ILE A 595 VAL A 598 M 1 TRP A 402 ? LYS A 404 ? TRP A 621 LYS A 623 M 2 PHE A 421 ? LEU A 423 ? PHE A 640 LEU A 642 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O HIS A 205 ? O HIS A 424 N PHE A 90 ? N PHE A 309 A 2 3 N LYS A 93 ? N LYS A 312 O GLU A 467 ? O GLU A 686 A 3 4 O SER A 458 ? O SER A 677 N LEU A 31 ? N LEU A 250 A 4 5 O ILE A 22 ? O ILE A 241 N THR A 15 ? N THR A 234 B 1 2 O ALA A 117 ? O ALA A 336 N GLU A 106 ? N GLU A 325 B 2 3 N LYS A 93 ? N LYS A 312 O GLU A 467 ? O GLU A 686 B 3 4 O SER A 458 ? O SER A 677 N LEU A 31 ? N LEU A 250 B 4 5 N THR A 28 ? N THR A 247 O PHE A 154 ? O PHE A 373 C 1 2 N THR A 15 ? N THR A 234 O ILE A 22 ? O ILE A 241 C 2 3 N LEU A 31 ? N LEU A 250 O SER A 458 ? O SER A 677 C 3 4 O GLU A 467 ? O GLU A 686 N LYS A 93 ? N LYS A 312 C 4 5 N LEU A 95 ? N LEU A 314 O TYR A 197 ? O TYR A 416 D 1 2 N ILE A 42 ? N ILE A 261 O GLY A 58 ? O GLY A 277 D 2 3 N TRP A 63 ? N TRP A 282 O TYR A 159 ? O TYR A 378 E 1 2 N ILE A 42 ? N ILE A 261 O GLY A 58 ? O GLY A 277 E 2 3 N GLY A 64 ? N GLY A 283 O ILE A 432 ? O ILE A 651 E 3 4 O LYS A 433 ? O LYS A 652 N GLN A 125 ? N GLN A 344 E 4 5 N ILE A 124 ? N ILE A 343 O LEU A 187 ? O LEU A 406 F 1 2 N ALA A 209 ? N ALA A 428 O LEU A 515 ? O LEU A 734 G 1 2 N TYR A 228 ? N TYR A 447 O SER A 247 ? O SER A 466 H 1 2 N CYS A 266 ? N CYS A 485 O GLN A 382 ? O GLN A 601 I 1 2 N VAL A 272 ? N VAL A 491 O PHE A 318 ? O PHE A 537 J 1 2 N TYR A 292 ? N TYR A 511 O SER A 299 ? O SER A 518 K 1 2 N PHE A 326 ? N PHE A 545 O MET A 342 ? O MET A 561 L 1 2 N VAL A 363 ? N VAL A 582 O GLY A 377 ? O GLY A 596 M 1 2 N ALA A 403 ? N ALA A 622 O LEU A 423 ? O LEU A 642 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id A _struct_site.pdbx_auth_seq_id 1 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 3 _struct_site.details 'BINDING SITE FOR RESIDUE A A 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 HIS A 413 ? HIS A 632 . ? 1_555 ? 2 AC1 3 SER A 415 ? SER A 634 . ? 1_555 ? 3 AC1 3 GLY A 422 ? GLY A 641 . ? 1_555 ? # _pdbx_point_symmetry.entry_id 3RA8 _pdbx_point_symmetry.Schoenflies_symbol I _pdbx_point_symmetry.circular_symmetry ? _pdbx_point_symmetry.H-M_notation ? # _pdbx_entry_details.entry_id 3RA8 _pdbx_entry_details.nonpolymer_details ;THE VIRUS CAPSID IS FROM AAV8 VIRUS BUT THE GENE ENCAPSULATED BY THE VIRUS WAS GFP. ONLY ONE RESIDUE WAS OBSERVED IN THE ELECTRON DENSITY MAP FROM THE GENE CODING GFP IN THIS STRUCTURE ; _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 CYS N N N N 111 CYS CA C N R 112 CYS C C N N 113 CYS O O N N 114 CYS CB C N N 115 CYS SG S N N 116 CYS OXT O N N 117 CYS H H N N 118 CYS H2 H N N 119 CYS HA H N N 120 CYS HB2 H N N 121 CYS HB3 H N N 122 CYS HG H N N 123 CYS HXT H N N 124 GLN N N N N 125 GLN CA C N S 126 GLN C C N N 127 GLN O O N N 128 GLN CB C N N 129 GLN CG C N N 130 GLN CD C N N 131 GLN OE1 O N N 132 GLN NE2 N N N 133 GLN OXT O N N 134 GLN H H N N 135 GLN H2 H N N 136 GLN HA H N N 137 GLN HB2 H N N 138 GLN HB3 H N N 139 GLN HG2 H N N 140 GLN HG3 H N N 141 GLN HE21 H N N 142 GLN HE22 H N N 143 GLN HXT H N N 144 GLU N N N N 145 GLU CA C N S 146 GLU C C N N 147 GLU O O N N 148 GLU CB C N N 149 GLU CG C N N 150 GLU CD C N N 151 GLU OE1 O N N 152 GLU OE2 O N N 153 GLU OXT O N N 154 GLU H H N N 155 GLU H2 H N N 156 GLU HA H N N 157 GLU HB2 H N N 158 GLU HB3 H N N 159 GLU HG2 H N N 160 GLU HG3 H N N 161 GLU HE2 H N N 162 GLU HXT H N N 163 GLY N N N N 164 GLY CA C N N 165 GLY C C N N 166 GLY O O N N 167 GLY OXT O N N 168 GLY H H N N 169 GLY H2 H N N 170 GLY HA2 H N N 171 GLY HA3 H N N 172 GLY HXT H N N 173 HIS N N N N 174 HIS CA C N S 175 HIS C C N N 176 HIS O O N N 177 HIS CB C N N 178 HIS CG C Y N 179 HIS ND1 N Y N 180 HIS CD2 C Y N 181 HIS CE1 C Y N 182 HIS NE2 N Y N 183 HIS OXT O N N 184 HIS H H N N 185 HIS H2 H N N 186 HIS HA H N N 187 HIS HB2 H N N 188 HIS HB3 H N N 189 HIS HD1 H N N 190 HIS HD2 H N N 191 HIS HE1 H N N 192 HIS HE2 H N N 193 HIS HXT H N N 194 HOH O O N N 195 HOH H1 H N N 196 HOH H2 H N N 197 ILE N N N N 198 ILE CA C N S 199 ILE C C N N 200 ILE O O N N 201 ILE CB C N S 202 ILE CG1 C N N 203 ILE CG2 C N N 204 ILE CD1 C N N 205 ILE OXT O N N 206 ILE H H N N 207 ILE H2 H N N 208 ILE HA H N N 209 ILE HB H N N 210 ILE HG12 H N N 211 ILE HG13 H N N 212 ILE HG21 H N N 213 ILE HG22 H N N 214 ILE HG23 H N N 215 ILE HD11 H N N 216 ILE HD12 H N N 217 ILE HD13 H N N 218 ILE HXT H N N 219 LEU N N N N 220 LEU CA C N S 221 LEU C C N N 222 LEU O O N N 223 LEU CB C N N 224 LEU CG C N N 225 LEU CD1 C N N 226 LEU CD2 C N N 227 LEU OXT O N N 228 LEU H H N N 229 LEU H2 H N N 230 LEU HA H N N 231 LEU HB2 H N N 232 LEU HB3 H N N 233 LEU HG H N N 234 LEU HD11 H N N 235 LEU HD12 H N N 236 LEU HD13 H N N 237 LEU HD21 H N N 238 LEU HD22 H N N 239 LEU HD23 H N N 240 LEU HXT H N N 241 LYS N N N N 242 LYS CA C N S 243 LYS C C N N 244 LYS O O N N 245 LYS CB C N N 246 LYS CG C N N 247 LYS CD C N N 248 LYS CE C N N 249 LYS NZ N N N 250 LYS OXT O N N 251 LYS H H N N 252 LYS H2 H N N 253 LYS HA H N N 254 LYS HB2 H N N 255 LYS HB3 H N N 256 LYS HG2 H N N 257 LYS HG3 H N N 258 LYS HD2 H N N 259 LYS HD3 H N N 260 LYS HE2 H N N 261 LYS HE3 H N N 262 LYS HZ1 H N N 263 LYS HZ2 H N N 264 LYS HZ3 H N N 265 LYS HXT H N N 266 MET N N N N 267 MET CA C N S 268 MET C C N N 269 MET O O N N 270 MET CB C N N 271 MET CG C N N 272 MET SD S N N 273 MET CE C N N 274 MET OXT O N N 275 MET H H N N 276 MET H2 H N N 277 MET HA H N N 278 MET HB2 H N N 279 MET HB3 H N N 280 MET HG2 H N N 281 MET HG3 H N N 282 MET HE1 H N N 283 MET HE2 H N N 284 MET HE3 H N N 285 MET HXT H N N 286 PHE N N N N 287 PHE CA C N S 288 PHE C C N N 289 PHE O O N N 290 PHE CB C N N 291 PHE CG C Y N 292 PHE CD1 C Y N 293 PHE CD2 C Y N 294 PHE CE1 C Y N 295 PHE CE2 C Y N 296 PHE CZ C Y N 297 PHE OXT O N N 298 PHE H H N N 299 PHE H2 H N N 300 PHE HA H N N 301 PHE HB2 H N N 302 PHE HB3 H N N 303 PHE HD1 H N N 304 PHE HD2 H N N 305 PHE HE1 H N N 306 PHE HE2 H N N 307 PHE HZ H N N 308 PHE HXT H N N 309 PRO N N N N 310 PRO CA C N S 311 PRO C C N N 312 PRO O O N N 313 PRO CB C N N 314 PRO CG C N N 315 PRO CD C N N 316 PRO OXT O N N 317 PRO H H N N 318 PRO HA H N N 319 PRO HB2 H N N 320 PRO HB3 H N N 321 PRO HG2 H N N 322 PRO HG3 H N N 323 PRO HD2 H N N 324 PRO HD3 H N N 325 PRO HXT H N N 326 SER N N N N 327 SER CA C N S 328 SER C C N N 329 SER O O N N 330 SER CB C N N 331 SER OG O N N 332 SER OXT O N N 333 SER H H N N 334 SER H2 H N N 335 SER HA H N N 336 SER HB2 H N N 337 SER HB3 H N N 338 SER HG H N N 339 SER HXT H N N 340 THR N N N N 341 THR CA C N S 342 THR C C N N 343 THR O O N N 344 THR CB C N R 345 THR OG1 O N N 346 THR CG2 C N N 347 THR OXT O N N 348 THR H H N N 349 THR H2 H N N 350 THR HA H N N 351 THR HB H N N 352 THR HG1 H N N 353 THR HG21 H N N 354 THR HG22 H N N 355 THR HG23 H N N 356 THR HXT H N N 357 TRP N N N N 358 TRP CA C N S 359 TRP C C N N 360 TRP O O N N 361 TRP CB C N N 362 TRP CG C Y N 363 TRP CD1 C Y N 364 TRP CD2 C Y N 365 TRP NE1 N Y N 366 TRP CE2 C Y N 367 TRP CE3 C Y N 368 TRP CZ2 C Y N 369 TRP CZ3 C Y N 370 TRP CH2 C Y N 371 TRP OXT O N N 372 TRP H H N N 373 TRP H2 H N N 374 TRP HA H N N 375 TRP HB2 H N N 376 TRP HB3 H N N 377 TRP HD1 H N N 378 TRP HE1 H N N 379 TRP HE3 H N N 380 TRP HZ2 H N N 381 TRP HZ3 H N N 382 TRP HH2 H N N 383 TRP HXT H N N 384 TYR N N N N 385 TYR CA C N S 386 TYR C C N N 387 TYR O O N N 388 TYR CB C N N 389 TYR CG C Y N 390 TYR CD1 C Y N 391 TYR CD2 C Y N 392 TYR CE1 C Y N 393 TYR CE2 C Y N 394 TYR CZ C Y N 395 TYR OH O N N 396 TYR OXT O N N 397 TYR H H N N 398 TYR H2 H N N 399 TYR HA H N N 400 TYR HB2 H N N 401 TYR HB3 H N N 402 TYR HD1 H N N 403 TYR HD2 H N N 404 TYR HE1 H N N 405 TYR HE2 H N N 406 TYR HH H N N 407 TYR HXT H N N 408 VAL N N N N 409 VAL CA C N S 410 VAL C C N N 411 VAL O O N N 412 VAL CB C N N 413 VAL CG1 C N N 414 VAL CG2 C N N 415 VAL OXT O N N 416 VAL H H N N 417 VAL H2 H N N 418 VAL HA H N N 419 VAL HB H N N 420 VAL HG11 H N N 421 VAL HG12 H N N 422 VAL HG13 H N N 423 VAL HG21 H N N 424 VAL HG22 H N N 425 VAL HG23 H N N 426 VAL HXT H N N 427 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 CYS N CA sing N N 109 CYS N H sing N N 110 CYS N H2 sing N N 111 CYS CA C sing N N 112 CYS CA CB sing N N 113 CYS CA HA sing N N 114 CYS C O doub N N 115 CYS C OXT sing N N 116 CYS CB SG sing N N 117 CYS CB HB2 sing N N 118 CYS CB HB3 sing N N 119 CYS SG HG sing N N 120 CYS OXT HXT sing N N 121 GLN N CA sing N N 122 GLN N H sing N N 123 GLN N H2 sing N N 124 GLN CA C sing N N 125 GLN CA CB sing N N 126 GLN CA HA sing N N 127 GLN C O doub N N 128 GLN C OXT sing N N 129 GLN CB CG sing N N 130 GLN CB HB2 sing N N 131 GLN CB HB3 sing N N 132 GLN CG CD sing N N 133 GLN CG HG2 sing N N 134 GLN CG HG3 sing N N 135 GLN CD OE1 doub N N 136 GLN CD NE2 sing N N 137 GLN NE2 HE21 sing N N 138 GLN NE2 HE22 sing N N 139 GLN OXT HXT sing N N 140 GLU N CA sing N N 141 GLU N H sing N N 142 GLU N H2 sing N N 143 GLU CA C sing N N 144 GLU CA CB sing N N 145 GLU CA HA sing N N 146 GLU C O doub N N 147 GLU C OXT sing N N 148 GLU CB CG sing N N 149 GLU CB HB2 sing N N 150 GLU CB HB3 sing N N 151 GLU CG CD sing N N 152 GLU CG HG2 sing N N 153 GLU CG HG3 sing N N 154 GLU CD OE1 doub N N 155 GLU CD OE2 sing N N 156 GLU OE2 HE2 sing N N 157 GLU OXT HXT sing N N 158 GLY N CA sing N N 159 GLY N H sing N N 160 GLY N H2 sing N N 161 GLY CA C sing N N 162 GLY CA HA2 sing N N 163 GLY CA HA3 sing N N 164 GLY C O doub N N 165 GLY C OXT sing N N 166 GLY OXT HXT sing N N 167 HIS N CA sing N N 168 HIS N H sing N N 169 HIS N H2 sing N N 170 HIS CA C sing N N 171 HIS CA CB sing N N 172 HIS CA HA sing N N 173 HIS C O doub N N 174 HIS C OXT sing N N 175 HIS CB CG sing N N 176 HIS CB HB2 sing N N 177 HIS CB HB3 sing N N 178 HIS CG ND1 sing Y N 179 HIS CG CD2 doub Y N 180 HIS ND1 CE1 doub Y N 181 HIS ND1 HD1 sing N N 182 HIS CD2 NE2 sing Y N 183 HIS CD2 HD2 sing N N 184 HIS CE1 NE2 sing Y N 185 HIS CE1 HE1 sing N N 186 HIS NE2 HE2 sing N N 187 HIS OXT HXT sing N N 188 HOH O H1 sing N N 189 HOH O H2 sing N N 190 ILE N CA sing N N 191 ILE N H sing N N 192 ILE N H2 sing N N 193 ILE CA C sing N N 194 ILE CA CB sing N N 195 ILE CA HA sing N N 196 ILE C O doub N N 197 ILE C OXT sing N N 198 ILE CB CG1 sing N N 199 ILE CB CG2 sing N N 200 ILE CB HB sing N N 201 ILE CG1 CD1 sing N N 202 ILE CG1 HG12 sing N N 203 ILE CG1 HG13 sing N N 204 ILE CG2 HG21 sing N N 205 ILE CG2 HG22 sing N N 206 ILE CG2 HG23 sing N N 207 ILE CD1 HD11 sing N N 208 ILE CD1 HD12 sing N N 209 ILE CD1 HD13 sing N N 210 ILE OXT HXT sing N N 211 LEU N CA sing N N 212 LEU N H sing N N 213 LEU N H2 sing N N 214 LEU CA C sing N N 215 LEU CA CB sing N N 216 LEU CA HA sing N N 217 LEU C O doub N N 218 LEU C OXT sing N N 219 LEU CB CG sing N N 220 LEU CB HB2 sing N N 221 LEU CB HB3 sing N N 222 LEU CG CD1 sing N N 223 LEU CG CD2 sing N N 224 LEU CG HG sing N N 225 LEU CD1 HD11 sing N N 226 LEU CD1 HD12 sing N N 227 LEU CD1 HD13 sing N N 228 LEU CD2 HD21 sing N N 229 LEU CD2 HD22 sing N N 230 LEU CD2 HD23 sing N N 231 LEU OXT HXT sing N N 232 LYS N CA sing N N 233 LYS N H sing N N 234 LYS N H2 sing N N 235 LYS CA C sing N N 236 LYS CA CB sing N N 237 LYS CA HA sing N N 238 LYS C O doub N N 239 LYS C OXT sing N N 240 LYS CB CG sing N N 241 LYS CB HB2 sing N N 242 LYS CB HB3 sing N N 243 LYS CG CD sing N N 244 LYS CG HG2 sing N N 245 LYS CG HG3 sing N N 246 LYS CD CE sing N N 247 LYS CD HD2 sing N N 248 LYS CD HD3 sing N N 249 LYS CE NZ sing N N 250 LYS CE HE2 sing N N 251 LYS CE HE3 sing N N 252 LYS NZ HZ1 sing N N 253 LYS NZ HZ2 sing N N 254 LYS NZ HZ3 sing N N 255 LYS OXT HXT sing N N 256 MET N CA sing N N 257 MET N H sing N N 258 MET N H2 sing N N 259 MET CA C sing N N 260 MET CA CB sing N N 261 MET CA HA sing N N 262 MET C O doub N N 263 MET C OXT sing N N 264 MET CB CG sing N N 265 MET CB HB2 sing N N 266 MET CB HB3 sing N N 267 MET CG SD sing N N 268 MET CG HG2 sing N N 269 MET CG HG3 sing N N 270 MET SD CE sing N N 271 MET CE HE1 sing N N 272 MET CE HE2 sing N N 273 MET CE HE3 sing N N 274 MET OXT HXT sing N N 275 PHE N CA sing N N 276 PHE N H sing N N 277 PHE N H2 sing N N 278 PHE CA C sing N N 279 PHE CA CB sing N N 280 PHE CA HA sing N N 281 PHE C O doub N N 282 PHE C OXT sing N N 283 PHE CB CG sing N N 284 PHE CB HB2 sing N N 285 PHE CB HB3 sing N N 286 PHE CG CD1 doub Y N 287 PHE CG CD2 sing Y N 288 PHE CD1 CE1 sing Y N 289 PHE CD1 HD1 sing N N 290 PHE CD2 CE2 doub Y N 291 PHE CD2 HD2 sing N N 292 PHE CE1 CZ doub Y N 293 PHE CE1 HE1 sing N N 294 PHE CE2 CZ sing Y N 295 PHE CE2 HE2 sing N N 296 PHE CZ HZ sing N N 297 PHE OXT HXT sing N N 298 PRO N CA sing N N 299 PRO N CD sing N N 300 PRO N H sing N N 301 PRO CA C sing N N 302 PRO CA CB sing N N 303 PRO CA HA sing N N 304 PRO C O doub N N 305 PRO C OXT sing N N 306 PRO CB CG sing N N 307 PRO CB HB2 sing N N 308 PRO CB HB3 sing N N 309 PRO CG CD sing N N 310 PRO CG HG2 sing N N 311 PRO CG HG3 sing N N 312 PRO CD HD2 sing N N 313 PRO CD HD3 sing N N 314 PRO OXT HXT sing N N 315 SER N CA sing N N 316 SER N H sing N N 317 SER N H2 sing N N 318 SER CA C sing N N 319 SER CA CB sing N N 320 SER CA HA sing N N 321 SER C O doub N N 322 SER C OXT sing N N 323 SER CB OG sing N N 324 SER CB HB2 sing N N 325 SER CB HB3 sing N N 326 SER OG HG sing N N 327 SER OXT HXT sing N N 328 THR N CA sing N N 329 THR N H sing N N 330 THR N H2 sing N N 331 THR CA C sing N N 332 THR CA CB sing N N 333 THR CA HA sing N N 334 THR C O doub N N 335 THR C OXT sing N N 336 THR CB OG1 sing N N 337 THR CB CG2 sing N N 338 THR CB HB sing N N 339 THR OG1 HG1 sing N N 340 THR CG2 HG21 sing N N 341 THR CG2 HG22 sing N N 342 THR CG2 HG23 sing N N 343 THR OXT HXT sing N N 344 TRP N CA sing N N 345 TRP N H sing N N 346 TRP N H2 sing N N 347 TRP CA C sing N N 348 TRP CA CB sing N N 349 TRP CA HA sing N N 350 TRP C O doub N N 351 TRP C OXT sing N N 352 TRP CB CG sing N N 353 TRP CB HB2 sing N N 354 TRP CB HB3 sing N N 355 TRP CG CD1 doub Y N 356 TRP CG CD2 sing Y N 357 TRP CD1 NE1 sing Y N 358 TRP CD1 HD1 sing N N 359 TRP CD2 CE2 doub Y N 360 TRP CD2 CE3 sing Y N 361 TRP NE1 CE2 sing Y N 362 TRP NE1 HE1 sing N N 363 TRP CE2 CZ2 sing Y N 364 TRP CE3 CZ3 doub Y N 365 TRP CE3 HE3 sing N N 366 TRP CZ2 CH2 doub Y N 367 TRP CZ2 HZ2 sing N N 368 TRP CZ3 CH2 sing Y N 369 TRP CZ3 HZ3 sing N N 370 TRP CH2 HH2 sing N N 371 TRP OXT HXT sing N N 372 TYR N CA sing N N 373 TYR N H sing N N 374 TYR N H2 sing N N 375 TYR CA C sing N N 376 TYR CA CB sing N N 377 TYR CA HA sing N N 378 TYR C O doub N N 379 TYR C OXT sing N N 380 TYR CB CG sing N N 381 TYR CB HB2 sing N N 382 TYR CB HB3 sing N N 383 TYR CG CD1 doub Y N 384 TYR CG CD2 sing Y N 385 TYR CD1 CE1 sing Y N 386 TYR CD1 HD1 sing N N 387 TYR CD2 CE2 doub Y N 388 TYR CD2 HD2 sing N N 389 TYR CE1 CZ doub Y N 390 TYR CE1 HE1 sing N N 391 TYR CE2 CZ sing Y N 392 TYR CE2 HE2 sing N N 393 TYR CZ OH sing N N 394 TYR OH HH sing N N 395 TYR OXT HXT sing N N 396 VAL N CA sing N N 397 VAL N H sing N N 398 VAL N H2 sing N N 399 VAL CA C sing N N 400 VAL CA CB sing N N 401 VAL CA HA sing N N 402 VAL C O doub N N 403 VAL C OXT sing N N 404 VAL CB CG1 sing N N 405 VAL CB CG2 sing N N 406 VAL CB HB sing N N 407 VAL CG1 HG11 sing N N 408 VAL CG1 HG12 sing N N 409 VAL CG1 HG13 sing N N 410 VAL CG2 HG21 sing N N 411 VAL CG2 HG22 sing N N 412 VAL CG2 HG23 sing N N 413 VAL OXT HXT sing N N 414 # _atom_sites.entry_id 3RA8 _atom_sites.fract_transf_matrix[1][1] 0.003877 _atom_sites.fract_transf_matrix[1][2] 0.002238 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.004477 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.002229 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_