data_3RA9 # _entry.id 3RA9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3RA9 pdb_00003ra9 10.2210/pdb3ra9/pdb NDB NA1038 ? ? RCSB RCSB064685 ? ? WWPDB D_1000064685 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-09-21 2 'Structure model' 1 1 2013-06-26 3 'Structure model' 1 2 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_oper_list.name' 4 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 5 3 'Structure model' '_pdbx_struct_oper_list.type' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3RA9 _pdbx_database_status.recvd_initial_deposition_date 2011-03-27 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3RA2 . unspecified PDB 3RA4 . unspecified PDB 3RA8 . unspecified PDB 3RAA . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nam, H.-J.' 1 'Gurda, B.' 2 'McKenna, R.' 3 'Porter, M.' 4 'Byrne, B.' 5 'Salganik, M.' 6 'Muzyczka, N.' 7 'Agbandje-McKenna, M.' 8 # _citation.id primary _citation.title 'Structural studies of adeno-associated virus serotype 8 capsid transitions associated with endosomal trafficking.' _citation.journal_abbrev J.Virol. _citation.journal_volume 85 _citation.page_first 11791 _citation.page_last 11799 _citation.year 2011 _citation.journal_id_ASTM JOVIAM _citation.country US _citation.journal_id_ISSN 0022-538X _citation.journal_id_CSD 0825 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21900159 _citation.pdbx_database_id_DOI 10.1128/JVI.05305-11 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nam, H.J.' 1 ? primary 'Gurda, B.L.' 2 ? primary 'McKenna, R.' 3 ? primary 'Potter, M.' 4 ? primary 'Byrne, B.' 5 ? primary 'Salganik, M.' 6 ? primary 'Muzyczka, N.' 7 ? primary 'Agbandje-McKenna, M.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Capsid protein' 58528.367 1 ? ? 'UNP residues 220-738' ? 2 polymer man ;DNA (5'-D(P*CP*A)-3') ; 557.431 1 ? ? ? ? 3 water nat water 18.015 54 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;DGVGSSSGNWHCDSTWLGDRVITTSTRTWALPTYNNHLYKQISNGTSGGATNDNTYFGYSTPWGYFDFNRFHCHFSPRDW QRLINNNWGFRPKRLSFKLFNIQVKEVTQNEGTKTIANNLTSTIQVFTDSEYQLPYVLGSAHQGCLPPFPADVFMIPQYG YLTLNNGSQAVGRSSFYCLEYFPSQMLRTGNNFQFTYTFEDVPFHSSYAHSQSLDRLMNPLIDQYLYYLSRTQTTGGTAN TQTLGFSQGGPNTMANQAKNWLPGPCYRQQRVSTTTGQNNNSNFAWTAGTKYHLNGRNSLANPGIAMATHKDDEERFFPS NGILIFGKQNAARDNADYSDVMLTSEEEIKTTNPVATEEYGIVADNLQQQNTAPQIGTVNSQGALPGMVWQNRDVYLQGP IWAKIPHTDGNFHPSPLMGGFGLKHPPPQILIKNTPVPADPPTTFNQSKLNSFITQYSTGQVSVEIEWELQKENSKRWNP EIQYTSNYYKSTSVDFAVNTEGVYSEPRPIGTRYLTRNL ; ;DGVGSSSGNWHCDSTWLGDRVITTSTRTWALPTYNNHLYKQISNGTSGGATNDNTYFGYSTPWGYFDFNRFHCHFSPRDW QRLINNNWGFRPKRLSFKLFNIQVKEVTQNEGTKTIANNLTSTIQVFTDSEYQLPYVLGSAHQGCLPPFPADVFMIPQYG YLTLNNGSQAVGRSSFYCLEYFPSQMLRTGNNFQFTYTFEDVPFHSSYAHSQSLDRLMNPLIDQYLYYLSRTQTTGGTAN TQTLGFSQGGPNTMANQAKNWLPGPCYRQQRVSTTTGQNNNSNFAWTAGTKYHLNGRNSLANPGIAMATHKDDEERFFPS NGILIFGKQNAARDNADYSDVMLTSEEEIKTTNPVATEEYGIVADNLQQQNTAPQIGTVNSQGALPGMVWQNRDVYLQGP IWAKIPHTDGNFHPSPLMGGFGLKHPPPQILIKNTPVPADPPTTFNQSKLNSFITQYSTGQVSVEIEWELQKENSKRWNP EIQYTSNYYKSTSVDFAVNTEGVYSEPRPIGTRYLTRNL ; A ? 2 polydeoxyribonucleotide no no '(DC)(DA)' CA D ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 GLY n 1 3 VAL n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 SER n 1 8 GLY n 1 9 ASN n 1 10 TRP n 1 11 HIS n 1 12 CYS n 1 13 ASP n 1 14 SER n 1 15 THR n 1 16 TRP n 1 17 LEU n 1 18 GLY n 1 19 ASP n 1 20 ARG n 1 21 VAL n 1 22 ILE n 1 23 THR n 1 24 THR n 1 25 SER n 1 26 THR n 1 27 ARG n 1 28 THR n 1 29 TRP n 1 30 ALA n 1 31 LEU n 1 32 PRO n 1 33 THR n 1 34 TYR n 1 35 ASN n 1 36 ASN n 1 37 HIS n 1 38 LEU n 1 39 TYR n 1 40 LYS n 1 41 GLN n 1 42 ILE n 1 43 SER n 1 44 ASN n 1 45 GLY n 1 46 THR n 1 47 SER n 1 48 GLY n 1 49 GLY n 1 50 ALA n 1 51 THR n 1 52 ASN n 1 53 ASP n 1 54 ASN n 1 55 THR n 1 56 TYR n 1 57 PHE n 1 58 GLY n 1 59 TYR n 1 60 SER n 1 61 THR n 1 62 PRO n 1 63 TRP n 1 64 GLY n 1 65 TYR n 1 66 PHE n 1 67 ASP n 1 68 PHE n 1 69 ASN n 1 70 ARG n 1 71 PHE n 1 72 HIS n 1 73 CYS n 1 74 HIS n 1 75 PHE n 1 76 SER n 1 77 PRO n 1 78 ARG n 1 79 ASP n 1 80 TRP n 1 81 GLN n 1 82 ARG n 1 83 LEU n 1 84 ILE n 1 85 ASN n 1 86 ASN n 1 87 ASN n 1 88 TRP n 1 89 GLY n 1 90 PHE n 1 91 ARG n 1 92 PRO n 1 93 LYS n 1 94 ARG n 1 95 LEU n 1 96 SER n 1 97 PHE n 1 98 LYS n 1 99 LEU n 1 100 PHE n 1 101 ASN n 1 102 ILE n 1 103 GLN n 1 104 VAL n 1 105 LYS n 1 106 GLU n 1 107 VAL n 1 108 THR n 1 109 GLN n 1 110 ASN n 1 111 GLU n 1 112 GLY n 1 113 THR n 1 114 LYS n 1 115 THR n 1 116 ILE n 1 117 ALA n 1 118 ASN n 1 119 ASN n 1 120 LEU n 1 121 THR n 1 122 SER n 1 123 THR n 1 124 ILE n 1 125 GLN n 1 126 VAL n 1 127 PHE n 1 128 THR n 1 129 ASP n 1 130 SER n 1 131 GLU n 1 132 TYR n 1 133 GLN n 1 134 LEU n 1 135 PRO n 1 136 TYR n 1 137 VAL n 1 138 LEU n 1 139 GLY n 1 140 SER n 1 141 ALA n 1 142 HIS n 1 143 GLN n 1 144 GLY n 1 145 CYS n 1 146 LEU n 1 147 PRO n 1 148 PRO n 1 149 PHE n 1 150 PRO n 1 151 ALA n 1 152 ASP n 1 153 VAL n 1 154 PHE n 1 155 MET n 1 156 ILE n 1 157 PRO n 1 158 GLN n 1 159 TYR n 1 160 GLY n 1 161 TYR n 1 162 LEU n 1 163 THR n 1 164 LEU n 1 165 ASN n 1 166 ASN n 1 167 GLY n 1 168 SER n 1 169 GLN n 1 170 ALA n 1 171 VAL n 1 172 GLY n 1 173 ARG n 1 174 SER n 1 175 SER n 1 176 PHE n 1 177 TYR n 1 178 CYS n 1 179 LEU n 1 180 GLU n 1 181 TYR n 1 182 PHE n 1 183 PRO n 1 184 SER n 1 185 GLN n 1 186 MET n 1 187 LEU n 1 188 ARG n 1 189 THR n 1 190 GLY n 1 191 ASN n 1 192 ASN n 1 193 PHE n 1 194 GLN n 1 195 PHE n 1 196 THR n 1 197 TYR n 1 198 THR n 1 199 PHE n 1 200 GLU n 1 201 ASP n 1 202 VAL n 1 203 PRO n 1 204 PHE n 1 205 HIS n 1 206 SER n 1 207 SER n 1 208 TYR n 1 209 ALA n 1 210 HIS n 1 211 SER n 1 212 GLN n 1 213 SER n 1 214 LEU n 1 215 ASP n 1 216 ARG n 1 217 LEU n 1 218 MET n 1 219 ASN n 1 220 PRO n 1 221 LEU n 1 222 ILE n 1 223 ASP n 1 224 GLN n 1 225 TYR n 1 226 LEU n 1 227 TYR n 1 228 TYR n 1 229 LEU n 1 230 SER n 1 231 ARG n 1 232 THR n 1 233 GLN n 1 234 THR n 1 235 THR n 1 236 GLY n 1 237 GLY n 1 238 THR n 1 239 ALA n 1 240 ASN n 1 241 THR n 1 242 GLN n 1 243 THR n 1 244 LEU n 1 245 GLY n 1 246 PHE n 1 247 SER n 1 248 GLN n 1 249 GLY n 1 250 GLY n 1 251 PRO n 1 252 ASN n 1 253 THR n 1 254 MET n 1 255 ALA n 1 256 ASN n 1 257 GLN n 1 258 ALA n 1 259 LYS n 1 260 ASN n 1 261 TRP n 1 262 LEU n 1 263 PRO n 1 264 GLY n 1 265 PRO n 1 266 CYS n 1 267 TYR n 1 268 ARG n 1 269 GLN n 1 270 GLN n 1 271 ARG n 1 272 VAL n 1 273 SER n 1 274 THR n 1 275 THR n 1 276 THR n 1 277 GLY n 1 278 GLN n 1 279 ASN n 1 280 ASN n 1 281 ASN n 1 282 SER n 1 283 ASN n 1 284 PHE n 1 285 ALA n 1 286 TRP n 1 287 THR n 1 288 ALA n 1 289 GLY n 1 290 THR n 1 291 LYS n 1 292 TYR n 1 293 HIS n 1 294 LEU n 1 295 ASN n 1 296 GLY n 1 297 ARG n 1 298 ASN n 1 299 SER n 1 300 LEU n 1 301 ALA n 1 302 ASN n 1 303 PRO n 1 304 GLY n 1 305 ILE n 1 306 ALA n 1 307 MET n 1 308 ALA n 1 309 THR n 1 310 HIS n 1 311 LYS n 1 312 ASP n 1 313 ASP n 1 314 GLU n 1 315 GLU n 1 316 ARG n 1 317 PHE n 1 318 PHE n 1 319 PRO n 1 320 SER n 1 321 ASN n 1 322 GLY n 1 323 ILE n 1 324 LEU n 1 325 ILE n 1 326 PHE n 1 327 GLY n 1 328 LYS n 1 329 GLN n 1 330 ASN n 1 331 ALA n 1 332 ALA n 1 333 ARG n 1 334 ASP n 1 335 ASN n 1 336 ALA n 1 337 ASP n 1 338 TYR n 1 339 SER n 1 340 ASP n 1 341 VAL n 1 342 MET n 1 343 LEU n 1 344 THR n 1 345 SER n 1 346 GLU n 1 347 GLU n 1 348 GLU n 1 349 ILE n 1 350 LYS n 1 351 THR n 1 352 THR n 1 353 ASN n 1 354 PRO n 1 355 VAL n 1 356 ALA n 1 357 THR n 1 358 GLU n 1 359 GLU n 1 360 TYR n 1 361 GLY n 1 362 ILE n 1 363 VAL n 1 364 ALA n 1 365 ASP n 1 366 ASN n 1 367 LEU n 1 368 GLN n 1 369 GLN n 1 370 GLN n 1 371 ASN n 1 372 THR n 1 373 ALA n 1 374 PRO n 1 375 GLN n 1 376 ILE n 1 377 GLY n 1 378 THR n 1 379 VAL n 1 380 ASN n 1 381 SER n 1 382 GLN n 1 383 GLY n 1 384 ALA n 1 385 LEU n 1 386 PRO n 1 387 GLY n 1 388 MET n 1 389 VAL n 1 390 TRP n 1 391 GLN n 1 392 ASN n 1 393 ARG n 1 394 ASP n 1 395 VAL n 1 396 TYR n 1 397 LEU n 1 398 GLN n 1 399 GLY n 1 400 PRO n 1 401 ILE n 1 402 TRP n 1 403 ALA n 1 404 LYS n 1 405 ILE n 1 406 PRO n 1 407 HIS n 1 408 THR n 1 409 ASP n 1 410 GLY n 1 411 ASN n 1 412 PHE n 1 413 HIS n 1 414 PRO n 1 415 SER n 1 416 PRO n 1 417 LEU n 1 418 MET n 1 419 GLY n 1 420 GLY n 1 421 PHE n 1 422 GLY n 1 423 LEU n 1 424 LYS n 1 425 HIS n 1 426 PRO n 1 427 PRO n 1 428 PRO n 1 429 GLN n 1 430 ILE n 1 431 LEU n 1 432 ILE n 1 433 LYS n 1 434 ASN n 1 435 THR n 1 436 PRO n 1 437 VAL n 1 438 PRO n 1 439 ALA n 1 440 ASP n 1 441 PRO n 1 442 PRO n 1 443 THR n 1 444 THR n 1 445 PHE n 1 446 ASN n 1 447 GLN n 1 448 SER n 1 449 LYS n 1 450 LEU n 1 451 ASN n 1 452 SER n 1 453 PHE n 1 454 ILE n 1 455 THR n 1 456 GLN n 1 457 TYR n 1 458 SER n 1 459 THR n 1 460 GLY n 1 461 GLN n 1 462 VAL n 1 463 SER n 1 464 VAL n 1 465 GLU n 1 466 ILE n 1 467 GLU n 1 468 TRP n 1 469 GLU n 1 470 LEU n 1 471 GLN n 1 472 LYS n 1 473 GLU n 1 474 ASN n 1 475 SER n 1 476 LYS n 1 477 ARG n 1 478 TRP n 1 479 ASN n 1 480 PRO n 1 481 GLU n 1 482 ILE n 1 483 GLN n 1 484 TYR n 1 485 THR n 1 486 SER n 1 487 ASN n 1 488 TYR n 1 489 TYR n 1 490 LYS n 1 491 SER n 1 492 THR n 1 493 SER n 1 494 VAL n 1 495 ASP n 1 496 PHE n 1 497 ALA n 1 498 VAL n 1 499 ASN n 1 500 THR n 1 501 GLU n 1 502 GLY n 1 503 VAL n 1 504 TYR n 1 505 SER n 1 506 GLU n 1 507 PRO n 1 508 ARG n 1 509 PRO n 1 510 ILE n 1 511 GLY n 1 512 THR n 1 513 ARG n 1 514 TYR n 1 515 LEU n 1 516 THR n 1 517 ARG n 1 518 ASN n 1 519 LEU n 2 1 DC n 2 2 DA n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? ? ? ? ? 'Serotype 8' ? ? ? ? 'Adeno-associated virus - 8' 202813 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'MAMMALIAN KIDNEY CELLS HEK293' ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? ? ? ? ? ? ? ? ? ? 'Aequorea victoria' 6100 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'MAMMALIAN KIDNEY CELLS HEK293' ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 220 220 ASP ASP A . n A 1 2 GLY 2 221 221 GLY GLY A . n A 1 3 VAL 3 222 222 VAL VAL A . n A 1 4 GLY 4 223 223 GLY GLY A . n A 1 5 SER 5 224 224 SER SER A . n A 1 6 SER 6 225 225 SER SER A . n A 1 7 SER 7 226 226 SER SER A . n A 1 8 GLY 8 227 227 GLY GLY A . n A 1 9 ASN 9 228 228 ASN ASN A . n A 1 10 TRP 10 229 229 TRP TRP A . n A 1 11 HIS 11 230 230 HIS HIS A . n A 1 12 CYS 12 231 231 CYS CYS A . n A 1 13 ASP 13 232 232 ASP ASP A . n A 1 14 SER 14 233 233 SER SER A . n A 1 15 THR 15 234 234 THR THR A . n A 1 16 TRP 16 235 235 TRP TRP A . n A 1 17 LEU 17 236 236 LEU LEU A . n A 1 18 GLY 18 237 237 GLY GLY A . n A 1 19 ASP 19 238 238 ASP ASP A . n A 1 20 ARG 20 239 239 ARG ARG A . n A 1 21 VAL 21 240 240 VAL VAL A . n A 1 22 ILE 22 241 241 ILE ILE A . n A 1 23 THR 23 242 242 THR THR A . n A 1 24 THR 24 243 243 THR THR A . n A 1 25 SER 25 244 244 SER SER A . n A 1 26 THR 26 245 245 THR THR A . n A 1 27 ARG 27 246 246 ARG ARG A . n A 1 28 THR 28 247 247 THR THR A . n A 1 29 TRP 29 248 248 TRP TRP A . n A 1 30 ALA 30 249 249 ALA ALA A . n A 1 31 LEU 31 250 250 LEU LEU A . n A 1 32 PRO 32 251 251 PRO PRO A . n A 1 33 THR 33 252 252 THR THR A . n A 1 34 TYR 34 253 253 TYR TYR A . n A 1 35 ASN 35 254 254 ASN ASN A . n A 1 36 ASN 36 255 255 ASN ASN A . n A 1 37 HIS 37 256 256 HIS HIS A . n A 1 38 LEU 38 257 257 LEU LEU A . n A 1 39 TYR 39 258 258 TYR TYR A . n A 1 40 LYS 40 259 259 LYS LYS A . n A 1 41 GLN 41 260 260 GLN GLN A . n A 1 42 ILE 42 261 261 ILE ILE A . n A 1 43 SER 43 262 262 SER SER A . n A 1 44 ASN 44 263 263 ASN ASN A . n A 1 45 GLY 45 264 264 GLY GLY A . n A 1 46 THR 46 265 265 THR THR A . n A 1 47 SER 47 266 266 SER SER A . n A 1 48 GLY 48 267 267 GLY GLY A . n A 1 49 GLY 49 268 268 GLY GLY A . n A 1 50 ALA 50 269 269 ALA ALA A . n A 1 51 THR 51 270 270 THR THR A . n A 1 52 ASN 52 271 271 ASN ASN A . n A 1 53 ASP 53 272 272 ASP ASP A . n A 1 54 ASN 54 273 273 ASN ASN A . n A 1 55 THR 55 274 274 THR THR A . n A 1 56 TYR 56 275 275 TYR TYR A . n A 1 57 PHE 57 276 276 PHE PHE A . n A 1 58 GLY 58 277 277 GLY GLY A . n A 1 59 TYR 59 278 278 TYR TYR A . n A 1 60 SER 60 279 279 SER SER A . n A 1 61 THR 61 280 280 THR THR A . n A 1 62 PRO 62 281 281 PRO PRO A . n A 1 63 TRP 63 282 282 TRP TRP A . n A 1 64 GLY 64 283 283 GLY GLY A . n A 1 65 TYR 65 284 284 TYR TYR A . n A 1 66 PHE 66 285 285 PHE PHE A . n A 1 67 ASP 67 286 286 ASP ASP A . n A 1 68 PHE 68 287 287 PHE PHE A . n A 1 69 ASN 69 288 288 ASN ASN A . n A 1 70 ARG 70 289 289 ARG ARG A . n A 1 71 PHE 71 290 290 PHE PHE A . n A 1 72 HIS 72 291 291 HIS HIS A . n A 1 73 CYS 73 292 292 CYS CYS A . n A 1 74 HIS 74 293 293 HIS HIS A . n A 1 75 PHE 75 294 294 PHE PHE A . n A 1 76 SER 76 295 295 SER SER A . n A 1 77 PRO 77 296 296 PRO PRO A . n A 1 78 ARG 78 297 297 ARG ARG A . n A 1 79 ASP 79 298 298 ASP ASP A . n A 1 80 TRP 80 299 299 TRP TRP A . n A 1 81 GLN 81 300 300 GLN GLN A . n A 1 82 ARG 82 301 301 ARG ARG A . n A 1 83 LEU 83 302 302 LEU LEU A . n A 1 84 ILE 84 303 303 ILE ILE A . n A 1 85 ASN 85 304 304 ASN ASN A . n A 1 86 ASN 86 305 305 ASN ASN A . n A 1 87 ASN 87 306 306 ASN ASN A . n A 1 88 TRP 88 307 307 TRP TRP A . n A 1 89 GLY 89 308 308 GLY GLY A . n A 1 90 PHE 90 309 309 PHE PHE A . n A 1 91 ARG 91 310 310 ARG ARG A . n A 1 92 PRO 92 311 311 PRO PRO A . n A 1 93 LYS 93 312 312 LYS LYS A . n A 1 94 ARG 94 313 313 ARG ARG A . n A 1 95 LEU 95 314 314 LEU LEU A . n A 1 96 SER 96 315 315 SER SER A . n A 1 97 PHE 97 316 316 PHE PHE A . n A 1 98 LYS 98 317 317 LYS LYS A . n A 1 99 LEU 99 318 318 LEU LEU A . n A 1 100 PHE 100 319 319 PHE PHE A . n A 1 101 ASN 101 320 320 ASN ASN A . n A 1 102 ILE 102 321 321 ILE ILE A . n A 1 103 GLN 103 322 322 GLN GLN A . n A 1 104 VAL 104 323 323 VAL VAL A . n A 1 105 LYS 105 324 324 LYS LYS A . n A 1 106 GLU 106 325 325 GLU GLU A . n A 1 107 VAL 107 326 326 VAL VAL A . n A 1 108 THR 108 327 327 THR THR A . n A 1 109 GLN 109 328 328 GLN GLN A . n A 1 110 ASN 110 329 329 ASN ASN A . n A 1 111 GLU 111 330 330 GLU GLU A . n A 1 112 GLY 112 331 331 GLY GLY A . n A 1 113 THR 113 332 332 THR THR A . n A 1 114 LYS 114 333 333 LYS LYS A . n A 1 115 THR 115 334 334 THR THR A . n A 1 116 ILE 116 335 335 ILE ILE A . n A 1 117 ALA 117 336 336 ALA ALA A . n A 1 118 ASN 118 337 337 ASN ASN A . n A 1 119 ASN 119 338 338 ASN ASN A . n A 1 120 LEU 120 339 339 LEU LEU A . n A 1 121 THR 121 340 340 THR THR A . n A 1 122 SER 122 341 341 SER SER A . n A 1 123 THR 123 342 342 THR THR A . n A 1 124 ILE 124 343 343 ILE ILE A . n A 1 125 GLN 125 344 344 GLN GLN A . n A 1 126 VAL 126 345 345 VAL VAL A . n A 1 127 PHE 127 346 346 PHE PHE A . n A 1 128 THR 128 347 347 THR THR A . n A 1 129 ASP 129 348 348 ASP ASP A . n A 1 130 SER 130 349 349 SER SER A . n A 1 131 GLU 131 350 350 GLU GLU A . n A 1 132 TYR 132 351 351 TYR TYR A . n A 1 133 GLN 133 352 352 GLN GLN A . n A 1 134 LEU 134 353 353 LEU LEU A . n A 1 135 PRO 135 354 354 PRO PRO A . n A 1 136 TYR 136 355 355 TYR TYR A . n A 1 137 VAL 137 356 356 VAL VAL A . n A 1 138 LEU 138 357 357 LEU LEU A . n A 1 139 GLY 139 358 358 GLY GLY A . n A 1 140 SER 140 359 359 SER SER A . n A 1 141 ALA 141 360 360 ALA ALA A . n A 1 142 HIS 142 361 361 HIS HIS A . n A 1 143 GLN 143 362 362 GLN GLN A . n A 1 144 GLY 144 363 363 GLY GLY A . n A 1 145 CYS 145 364 364 CYS CYS A . n A 1 146 LEU 146 365 365 LEU LEU A . n A 1 147 PRO 147 366 366 PRO PRO A . n A 1 148 PRO 148 367 367 PRO PRO A . n A 1 149 PHE 149 368 368 PHE PHE A . n A 1 150 PRO 150 369 369 PRO PRO A . n A 1 151 ALA 151 370 370 ALA ALA A . n A 1 152 ASP 152 371 371 ASP ASP A . n A 1 153 VAL 153 372 372 VAL VAL A . n A 1 154 PHE 154 373 373 PHE PHE A . n A 1 155 MET 155 374 374 MET MET A . n A 1 156 ILE 156 375 375 ILE ILE A . n A 1 157 PRO 157 376 376 PRO PRO A . n A 1 158 GLN 158 377 377 GLN GLN A . n A 1 159 TYR 159 378 378 TYR TYR A . n A 1 160 GLY 160 379 379 GLY GLY A . n A 1 161 TYR 161 380 380 TYR TYR A . n A 1 162 LEU 162 381 381 LEU LEU A . n A 1 163 THR 163 382 382 THR THR A . n A 1 164 LEU 164 383 383 LEU LEU A . n A 1 165 ASN 165 384 384 ASN ASN A . n A 1 166 ASN 166 385 385 ASN ASN A . n A 1 167 GLY 167 386 386 GLY GLY A . n A 1 168 SER 168 387 387 SER SER A . n A 1 169 GLN 169 388 388 GLN GLN A . n A 1 170 ALA 170 389 389 ALA ALA A . n A 1 171 VAL 171 390 390 VAL VAL A . n A 1 172 GLY 172 391 391 GLY GLY A . n A 1 173 ARG 173 392 392 ARG ARG A . n A 1 174 SER 174 393 393 SER SER A . n A 1 175 SER 175 394 394 SER SER A . n A 1 176 PHE 176 395 395 PHE PHE A . n A 1 177 TYR 177 396 396 TYR TYR A . n A 1 178 CYS 178 397 397 CYS CYS A . n A 1 179 LEU 179 398 398 LEU LEU A . n A 1 180 GLU 180 399 399 GLU GLU A . n A 1 181 TYR 181 400 400 TYR TYR A . n A 1 182 PHE 182 401 401 PHE PHE A . n A 1 183 PRO 183 402 402 PRO PRO A . n A 1 184 SER 184 403 403 SER SER A . n A 1 185 GLN 185 404 404 GLN GLN A . n A 1 186 MET 186 405 405 MET MET A . n A 1 187 LEU 187 406 406 LEU LEU A . n A 1 188 ARG 188 407 407 ARG ARG A . n A 1 189 THR 189 408 408 THR THR A . n A 1 190 GLY 190 409 409 GLY GLY A . n A 1 191 ASN 191 410 410 ASN ASN A . n A 1 192 ASN 192 411 411 ASN ASN A . n A 1 193 PHE 193 412 412 PHE PHE A . n A 1 194 GLN 194 413 413 GLN GLN A . n A 1 195 PHE 195 414 414 PHE PHE A . n A 1 196 THR 196 415 415 THR THR A . n A 1 197 TYR 197 416 416 TYR TYR A . n A 1 198 THR 198 417 417 THR THR A . n A 1 199 PHE 199 418 418 PHE PHE A . n A 1 200 GLU 200 419 419 GLU GLU A . n A 1 201 ASP 201 420 420 ASP ASP A . n A 1 202 VAL 202 421 421 VAL VAL A . n A 1 203 PRO 203 422 422 PRO PRO A . n A 1 204 PHE 204 423 423 PHE PHE A . n A 1 205 HIS 205 424 424 HIS HIS A . n A 1 206 SER 206 425 425 SER SER A . n A 1 207 SER 207 426 426 SER SER A . n A 1 208 TYR 208 427 427 TYR TYR A . n A 1 209 ALA 209 428 428 ALA ALA A . n A 1 210 HIS 210 429 429 HIS HIS A . n A 1 211 SER 211 430 430 SER SER A . n A 1 212 GLN 212 431 431 GLN GLN A . n A 1 213 SER 213 432 432 SER SER A . n A 1 214 LEU 214 433 433 LEU LEU A . n A 1 215 ASP 215 434 434 ASP ASP A . n A 1 216 ARG 216 435 435 ARG ARG A . n A 1 217 LEU 217 436 436 LEU LEU A . n A 1 218 MET 218 437 437 MET MET A . n A 1 219 ASN 219 438 438 ASN ASN A . n A 1 220 PRO 220 439 439 PRO PRO A . n A 1 221 LEU 221 440 440 LEU LEU A . n A 1 222 ILE 222 441 441 ILE ILE A . n A 1 223 ASP 223 442 442 ASP ASP A . n A 1 224 GLN 224 443 443 GLN GLN A . n A 1 225 TYR 225 444 444 TYR TYR A . n A 1 226 LEU 226 445 445 LEU LEU A . n A 1 227 TYR 227 446 446 TYR TYR A . n A 1 228 TYR 228 447 447 TYR TYR A . n A 1 229 LEU 229 448 448 LEU LEU A . n A 1 230 SER 230 449 449 SER SER A . n A 1 231 ARG 231 450 450 ARG ARG A . n A 1 232 THR 232 451 451 THR THR A . n A 1 233 GLN 233 452 452 GLN GLN A . n A 1 234 THR 234 453 453 THR THR A . n A 1 235 THR 235 454 454 THR THR A . n A 1 236 GLY 236 455 455 GLY GLY A . n A 1 237 GLY 237 456 456 GLY GLY A . n A 1 238 THR 238 457 457 THR THR A . n A 1 239 ALA 239 458 458 ALA ALA A . n A 1 240 ASN 240 459 459 ASN ASN A . n A 1 241 THR 241 460 460 THR THR A . n A 1 242 GLN 242 461 461 GLN GLN A . n A 1 243 THR 243 462 462 THR THR A . n A 1 244 LEU 244 463 463 LEU LEU A . n A 1 245 GLY 245 464 464 GLY GLY A . n A 1 246 PHE 246 465 465 PHE PHE A . n A 1 247 SER 247 466 466 SER SER A . n A 1 248 GLN 248 467 467 GLN GLN A . n A 1 249 GLY 249 468 468 GLY GLY A . n A 1 250 GLY 250 469 469 GLY GLY A . n A 1 251 PRO 251 470 470 PRO PRO A . n A 1 252 ASN 252 471 471 ASN ASN A . n A 1 253 THR 253 472 472 THR THR A . n A 1 254 MET 254 473 473 MET MET A . n A 1 255 ALA 255 474 474 ALA ALA A . n A 1 256 ASN 256 475 475 ASN ASN A . n A 1 257 GLN 257 476 476 GLN GLN A . n A 1 258 ALA 258 477 477 ALA ALA A . n A 1 259 LYS 259 478 478 LYS LYS A . n A 1 260 ASN 260 479 479 ASN ASN A . n A 1 261 TRP 261 480 480 TRP TRP A . n A 1 262 LEU 262 481 481 LEU LEU A . n A 1 263 PRO 263 482 482 PRO PRO A . n A 1 264 GLY 264 483 483 GLY GLY A . n A 1 265 PRO 265 484 484 PRO PRO A . n A 1 266 CYS 266 485 485 CYS CYS A . n A 1 267 TYR 267 486 486 TYR TYR A . n A 1 268 ARG 268 487 487 ARG ARG A . n A 1 269 GLN 269 488 488 GLN GLN A . n A 1 270 GLN 270 489 489 GLN GLN A . n A 1 271 ARG 271 490 490 ARG ARG A . n A 1 272 VAL 272 491 491 VAL VAL A . n A 1 273 SER 273 492 492 SER SER A . n A 1 274 THR 274 493 493 THR THR A . n A 1 275 THR 275 494 494 THR THR A . n A 1 276 THR 276 495 495 THR THR A . n A 1 277 GLY 277 496 496 GLY GLY A . n A 1 278 GLN 278 497 497 GLN GLN A . n A 1 279 ASN 279 498 498 ASN ASN A . n A 1 280 ASN 280 499 499 ASN ASN A . n A 1 281 ASN 281 500 500 ASN ASN A . n A 1 282 SER 282 501 501 SER SER A . n A 1 283 ASN 283 502 502 ASN ASN A . n A 1 284 PHE 284 503 503 PHE PHE A . n A 1 285 ALA 285 504 504 ALA ALA A . n A 1 286 TRP 286 505 505 TRP TRP A . n A 1 287 THR 287 506 506 THR THR A . n A 1 288 ALA 288 507 507 ALA ALA A . n A 1 289 GLY 289 508 508 GLY GLY A . n A 1 290 THR 290 509 509 THR THR A . n A 1 291 LYS 291 510 510 LYS LYS A . n A 1 292 TYR 292 511 511 TYR TYR A . n A 1 293 HIS 293 512 512 HIS HIS A . n A 1 294 LEU 294 513 513 LEU LEU A . n A 1 295 ASN 295 514 514 ASN ASN A . n A 1 296 GLY 296 515 515 GLY GLY A . n A 1 297 ARG 297 516 516 ARG ARG A . n A 1 298 ASN 298 517 517 ASN ASN A . n A 1 299 SER 299 518 518 SER SER A . n A 1 300 LEU 300 519 519 LEU LEU A . n A 1 301 ALA 301 520 520 ALA ALA A . n A 1 302 ASN 302 521 521 ASN ASN A . n A 1 303 PRO 303 522 522 PRO PRO A . n A 1 304 GLY 304 523 523 GLY GLY A . n A 1 305 ILE 305 524 524 ILE ILE A . n A 1 306 ALA 306 525 525 ALA ALA A . n A 1 307 MET 307 526 526 MET MET A . n A 1 308 ALA 308 527 527 ALA ALA A . n A 1 309 THR 309 528 528 THR THR A . n A 1 310 HIS 310 529 529 HIS HIS A . n A 1 311 LYS 311 530 530 LYS LYS A . n A 1 312 ASP 312 531 531 ASP ASP A . n A 1 313 ASP 313 532 532 ASP ASP A . n A 1 314 GLU 314 533 533 GLU GLU A . n A 1 315 GLU 315 534 534 GLU GLU A . n A 1 316 ARG 316 535 535 ARG ARG A . n A 1 317 PHE 317 536 536 PHE PHE A . n A 1 318 PHE 318 537 537 PHE PHE A . n A 1 319 PRO 319 538 538 PRO PRO A . n A 1 320 SER 320 539 539 SER SER A . n A 1 321 ASN 321 540 540 ASN ASN A . n A 1 322 GLY 322 541 541 GLY GLY A . n A 1 323 ILE 323 542 542 ILE ILE A . n A 1 324 LEU 324 543 543 LEU LEU A . n A 1 325 ILE 325 544 544 ILE ILE A . n A 1 326 PHE 326 545 545 PHE PHE A . n A 1 327 GLY 327 546 546 GLY GLY A . n A 1 328 LYS 328 547 547 LYS LYS A . n A 1 329 GLN 329 548 548 GLN GLN A . n A 1 330 ASN 330 549 549 ASN ASN A . n A 1 331 ALA 331 550 550 ALA ALA A . n A 1 332 ALA 332 551 551 ALA ALA A . n A 1 333 ARG 333 552 552 ARG ARG A . n A 1 334 ASP 334 553 553 ASP ASP A . n A 1 335 ASN 335 554 554 ASN ASN A . n A 1 336 ALA 336 555 555 ALA ALA A . n A 1 337 ASP 337 556 556 ASP ASP A . n A 1 338 TYR 338 557 557 TYR TYR A . n A 1 339 SER 339 558 558 SER SER A . n A 1 340 ASP 340 559 559 ASP ASP A . n A 1 341 VAL 341 560 560 VAL VAL A . n A 1 342 MET 342 561 561 MET MET A . n A 1 343 LEU 343 562 562 LEU LEU A . n A 1 344 THR 344 563 563 THR THR A . n A 1 345 SER 345 564 564 SER SER A . n A 1 346 GLU 346 565 565 GLU GLU A . n A 1 347 GLU 347 566 566 GLU GLU A . n A 1 348 GLU 348 567 567 GLU GLU A . n A 1 349 ILE 349 568 568 ILE ILE A . n A 1 350 LYS 350 569 569 LYS LYS A . n A 1 351 THR 351 570 570 THR THR A . n A 1 352 THR 352 571 571 THR THR A . n A 1 353 ASN 353 572 572 ASN ASN A . n A 1 354 PRO 354 573 573 PRO PRO A . n A 1 355 VAL 355 574 574 VAL VAL A . n A 1 356 ALA 356 575 575 ALA ALA A . n A 1 357 THR 357 576 576 THR THR A . n A 1 358 GLU 358 577 577 GLU GLU A . n A 1 359 GLU 359 578 578 GLU GLU A . n A 1 360 TYR 360 579 579 TYR TYR A . n A 1 361 GLY 361 580 580 GLY GLY A . n A 1 362 ILE 362 581 581 ILE ILE A . n A 1 363 VAL 363 582 582 VAL VAL A . n A 1 364 ALA 364 583 583 ALA ALA A . n A 1 365 ASP 365 584 584 ASP ASP A . n A 1 366 ASN 366 585 585 ASN ASN A . n A 1 367 LEU 367 586 586 LEU LEU A . n A 1 368 GLN 368 587 587 GLN GLN A . n A 1 369 GLN 369 588 588 GLN GLN A . n A 1 370 GLN 370 589 589 GLN GLN A . n A 1 371 ASN 371 590 590 ASN ASN A . n A 1 372 THR 372 591 591 THR THR A . n A 1 373 ALA 373 592 592 ALA ALA A . n A 1 374 PRO 374 593 593 PRO PRO A . n A 1 375 GLN 375 594 594 GLN GLN A . n A 1 376 ILE 376 595 595 ILE ILE A . n A 1 377 GLY 377 596 596 GLY GLY A . n A 1 378 THR 378 597 597 THR THR A . n A 1 379 VAL 379 598 598 VAL VAL A . n A 1 380 ASN 380 599 599 ASN ASN A . n A 1 381 SER 381 600 600 SER SER A . n A 1 382 GLN 382 601 601 GLN GLN A . n A 1 383 GLY 383 602 602 GLY GLY A . n A 1 384 ALA 384 603 603 ALA ALA A . n A 1 385 LEU 385 604 604 LEU LEU A . n A 1 386 PRO 386 605 605 PRO PRO A . n A 1 387 GLY 387 606 606 GLY GLY A . n A 1 388 MET 388 607 607 MET MET A . n A 1 389 VAL 389 608 608 VAL VAL A . n A 1 390 TRP 390 609 609 TRP TRP A . n A 1 391 GLN 391 610 610 GLN GLN A . n A 1 392 ASN 392 611 611 ASN ASN A . n A 1 393 ARG 393 612 612 ARG ARG A . n A 1 394 ASP 394 613 613 ASP ASP A . n A 1 395 VAL 395 614 614 VAL VAL A . n A 1 396 TYR 396 615 615 TYR TYR A . n A 1 397 LEU 397 616 616 LEU LEU A . n A 1 398 GLN 398 617 617 GLN GLN A . n A 1 399 GLY 399 618 618 GLY GLY A . n A 1 400 PRO 400 619 619 PRO PRO A . n A 1 401 ILE 401 620 620 ILE ILE A . n A 1 402 TRP 402 621 621 TRP TRP A . n A 1 403 ALA 403 622 622 ALA ALA A . n A 1 404 LYS 404 623 623 LYS LYS A . n A 1 405 ILE 405 624 624 ILE ILE A . n A 1 406 PRO 406 625 625 PRO PRO A . n A 1 407 HIS 407 626 626 HIS HIS A . n A 1 408 THR 408 627 627 THR THR A . n A 1 409 ASP 409 628 628 ASP ASP A . n A 1 410 GLY 410 629 629 GLY GLY A . n A 1 411 ASN 411 630 630 ASN ASN A . n A 1 412 PHE 412 631 631 PHE PHE A . n A 1 413 HIS 413 632 632 HIS HIS A . n A 1 414 PRO 414 633 633 PRO PRO A . n A 1 415 SER 415 634 634 SER SER A . n A 1 416 PRO 416 635 635 PRO PRO A . n A 1 417 LEU 417 636 636 LEU LEU A . n A 1 418 MET 418 637 637 MET MET A . n A 1 419 GLY 419 638 638 GLY GLY A . n A 1 420 GLY 420 639 639 GLY GLY A . n A 1 421 PHE 421 640 640 PHE PHE A . n A 1 422 GLY 422 641 641 GLY GLY A . n A 1 423 LEU 423 642 642 LEU LEU A . n A 1 424 LYS 424 643 643 LYS LYS A . n A 1 425 HIS 425 644 644 HIS HIS A . n A 1 426 PRO 426 645 645 PRO PRO A . n A 1 427 PRO 427 646 646 PRO PRO A . n A 1 428 PRO 428 647 647 PRO PRO A . n A 1 429 GLN 429 648 648 GLN GLN A . n A 1 430 ILE 430 649 649 ILE ILE A . n A 1 431 LEU 431 650 650 LEU LEU A . n A 1 432 ILE 432 651 651 ILE ILE A . n A 1 433 LYS 433 652 652 LYS LYS A . n A 1 434 ASN 434 653 653 ASN ASN A . n A 1 435 THR 435 654 654 THR THR A . n A 1 436 PRO 436 655 655 PRO PRO A . n A 1 437 VAL 437 656 656 VAL VAL A . n A 1 438 PRO 438 657 657 PRO PRO A . n A 1 439 ALA 439 658 658 ALA ALA A . n A 1 440 ASP 440 659 659 ASP ASP A . n A 1 441 PRO 441 660 660 PRO PRO A . n A 1 442 PRO 442 661 661 PRO PRO A . n A 1 443 THR 443 662 662 THR THR A . n A 1 444 THR 444 663 663 THR THR A . n A 1 445 PHE 445 664 664 PHE PHE A . n A 1 446 ASN 446 665 665 ASN ASN A . n A 1 447 GLN 447 666 666 GLN GLN A . n A 1 448 SER 448 667 667 SER SER A . n A 1 449 LYS 449 668 668 LYS LYS A . n A 1 450 LEU 450 669 669 LEU LEU A . n A 1 451 ASN 451 670 670 ASN ASN A . n A 1 452 SER 452 671 671 SER SER A . n A 1 453 PHE 453 672 672 PHE PHE A . n A 1 454 ILE 454 673 673 ILE ILE A . n A 1 455 THR 455 674 674 THR THR A . n A 1 456 GLN 456 675 675 GLN GLN A . n A 1 457 TYR 457 676 676 TYR TYR A . n A 1 458 SER 458 677 677 SER SER A . n A 1 459 THR 459 678 678 THR THR A . n A 1 460 GLY 460 679 679 GLY GLY A . n A 1 461 GLN 461 680 680 GLN GLN A . n A 1 462 VAL 462 681 681 VAL VAL A . n A 1 463 SER 463 682 682 SER SER A . n A 1 464 VAL 464 683 683 VAL VAL A . n A 1 465 GLU 465 684 684 GLU GLU A . n A 1 466 ILE 466 685 685 ILE ILE A . n A 1 467 GLU 467 686 686 GLU GLU A . n A 1 468 TRP 468 687 687 TRP TRP A . n A 1 469 GLU 469 688 688 GLU GLU A . n A 1 470 LEU 470 689 689 LEU LEU A . n A 1 471 GLN 471 690 690 GLN GLN A . n A 1 472 LYS 472 691 691 LYS LYS A . n A 1 473 GLU 473 692 692 GLU GLU A . n A 1 474 ASN 474 693 693 ASN ASN A . n A 1 475 SER 475 694 694 SER SER A . n A 1 476 LYS 476 695 695 LYS LYS A . n A 1 477 ARG 477 696 696 ARG ARG A . n A 1 478 TRP 478 697 697 TRP TRP A . n A 1 479 ASN 479 698 698 ASN ASN A . n A 1 480 PRO 480 699 699 PRO PRO A . n A 1 481 GLU 481 700 700 GLU GLU A . n A 1 482 ILE 482 701 701 ILE ILE A . n A 1 483 GLN 483 702 702 GLN GLN A . n A 1 484 TYR 484 703 703 TYR TYR A . n A 1 485 THR 485 704 704 THR THR A . n A 1 486 SER 486 705 705 SER SER A . n A 1 487 ASN 487 706 706 ASN ASN A . n A 1 488 TYR 488 707 707 TYR TYR A . n A 1 489 TYR 489 708 708 TYR TYR A . n A 1 490 LYS 490 709 709 LYS LYS A . n A 1 491 SER 491 710 710 SER SER A . n A 1 492 THR 492 711 711 THR THR A . n A 1 493 SER 493 712 712 SER SER A . n A 1 494 VAL 494 713 713 VAL VAL A . n A 1 495 ASP 495 714 714 ASP ASP A . n A 1 496 PHE 496 715 715 PHE PHE A . n A 1 497 ALA 497 716 716 ALA ALA A . n A 1 498 VAL 498 717 717 VAL VAL A . n A 1 499 ASN 499 718 718 ASN ASN A . n A 1 500 THR 500 719 719 THR THR A . n A 1 501 GLU 501 720 720 GLU GLU A . n A 1 502 GLY 502 721 721 GLY GLY A . n A 1 503 VAL 503 722 722 VAL VAL A . n A 1 504 TYR 504 723 723 TYR TYR A . n A 1 505 SER 505 724 724 SER SER A . n A 1 506 GLU 506 725 725 GLU GLU A . n A 1 507 PRO 507 726 726 PRO PRO A . n A 1 508 ARG 508 727 727 ARG ARG A . n A 1 509 PRO 509 728 728 PRO PRO A . n A 1 510 ILE 510 729 729 ILE ILE A . n A 1 511 GLY 511 730 730 GLY GLY A . n A 1 512 THR 512 731 731 THR THR A . n A 1 513 ARG 513 732 732 ARG ARG A . n A 1 514 TYR 514 733 733 TYR TYR A . n A 1 515 LEU 515 734 734 LEU LEU A . n A 1 516 THR 516 735 735 THR THR A . n A 1 517 ARG 517 736 736 ARG ARG A . n A 1 518 ASN 518 737 737 ASN ASN A . n A 1 519 LEU 519 738 738 LEU LEU A . n B 2 1 DC 1 1 1 DC CYT D . n B 2 2 DA 2 2 2 DA ADE D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 1 1 HOH TIP A . C 3 HOH 2 2 2 HOH TIP A . C 3 HOH 3 3 3 HOH TIP A . C 3 HOH 4 4 4 HOH TIP A . C 3 HOH 5 5 5 HOH TIP A . C 3 HOH 6 6 6 HOH TIP A . C 3 HOH 7 7 7 HOH TIP A . C 3 HOH 8 8 8 HOH TIP A . C 3 HOH 9 9 9 HOH TIP A . C 3 HOH 10 10 10 HOH TIP A . C 3 HOH 11 11 11 HOH TIP A . C 3 HOH 12 12 12 HOH TIP A . C 3 HOH 13 13 13 HOH TIP A . C 3 HOH 14 14 14 HOH TIP A . C 3 HOH 15 15 15 HOH TIP A . C 3 HOH 16 16 16 HOH TIP A . C 3 HOH 17 17 17 HOH TIP A . C 3 HOH 18 18 18 HOH TIP A . C 3 HOH 19 19 19 HOH TIP A . C 3 HOH 20 20 20 HOH TIP A . C 3 HOH 21 21 21 HOH TIP A . C 3 HOH 22 22 22 HOH TIP A . C 3 HOH 23 23 23 HOH TIP A . C 3 HOH 24 24 24 HOH TIP A . C 3 HOH 25 25 25 HOH TIP A . C 3 HOH 26 26 26 HOH TIP A . C 3 HOH 27 27 27 HOH TIP A . C 3 HOH 28 28 28 HOH TIP A . C 3 HOH 29 29 29 HOH TIP A . C 3 HOH 30 30 30 HOH TIP A . C 3 HOH 31 31 31 HOH TIP A . C 3 HOH 32 32 32 HOH TIP A . C 3 HOH 33 33 33 HOH TIP A . C 3 HOH 34 34 34 HOH TIP A . C 3 HOH 35 35 35 HOH TIP A . C 3 HOH 36 36 36 HOH TIP A . C 3 HOH 37 37 37 HOH TIP A . C 3 HOH 38 38 38 HOH TIP A . C 3 HOH 39 39 39 HOH TIP A . C 3 HOH 40 40 40 HOH TIP A . C 3 HOH 41 41 41 HOH TIP A . C 3 HOH 42 42 42 HOH TIP A . C 3 HOH 43 43 43 HOH TIP A . C 3 HOH 44 44 44 HOH TIP A . C 3 HOH 45 45 45 HOH TIP A . C 3 HOH 46 46 46 HOH TIP A . C 3 HOH 47 47 47 HOH TIP A . C 3 HOH 48 48 48 HOH TIP A . C 3 HOH 49 49 49 HOH TIP A . C 3 HOH 50 50 50 HOH TIP A . C 3 HOH 51 51 51 HOH TIP A . C 3 HOH 52 52 52 HOH TIP A . C 3 HOH 53 53 53 HOH TIP A . C 3 HOH 54 54 54 HOH TIP A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 AMoRE phasing . ? 2 CNS refinement . ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 3RA9 _cell.length_a 257.940 _cell.length_b 257.940 _cell.length_c 448.690 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 120 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3RA9 _symmetry.space_group_name_H-M 'P 63 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3RA9 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details ;20 mM Tris pH 7.5, 4% PEG 8000, 1 M NaCl, Crystals were pre-soaked in pH6 cryosolvent for 24 hours, VAPOR DIFFUSION, HANGING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 113 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 300 mm plate' _diffrn_detector.pdbx_collection_date 2007-07-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.00 # _reflns.entry_id 3RA9 _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F 1 _reflns.d_resolution_low 40.0 _reflns.d_resolution_high 2.7 _reflns.number_obs 175411 _reflns.number_all 238727 _reflns.percent_possible_obs 73.5 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? # _reflns_shell.d_res_high 2.7 _reflns_shell.d_res_low 2.8 _reflns_shell.percent_possible_all 29.4 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.201 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3RA9 _refine.ls_number_reflns_obs 175411 _refine.ls_number_reflns_all 238727 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40 _refine.ls_d_res_high 2.7 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.244 _refine.ls_R_factor_all 0.244 _refine.ls_R_factor_R_work 0.243 _refine.ls_R_factor_R_free 0.248 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 8592 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4136 _refine_hist.pdbx_number_atoms_nucleic_acid 41 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 54 _refine_hist.number_atoms_total 4231 _refine_hist.d_res_high 2.7 _refine_hist.d_res_low 40 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id c_bond_d 0.010 ? ? ? ? 'X-RAY DIFFRACTION' c_angle_deg 1.6 ? ? ? ? 'X-RAY DIFFRACTION' # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.details _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.vector[2] _struct_ncs_oper.vector[3] 1 given ? 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 2 generate ? 0.563000 0.755110 0.335910 -0.756300 0.306850 0.577800 0.333230 -0.579350 0.743850 74.95680 -18.81060 -57.50880 3 generate ? -0.142580 0.462700 0.874980 -0.467840 -0.810530 0.352380 0.872240 -0.359100 0.332030 83.58780 -114.20290 -64.48110 4 generate ? -0.145900 -0.469860 0.870600 0.467680 -0.808230 -0.357820 0.871770 0.354960 0.337670 15.24300 -154.64000 -11.57300 5 generate ? 0.561530 -0.758480 0.330740 0.757020 0.309540 -0.575410 0.334060 0.573490 0.748010 -36.92500 -84.18500 27.84400 6 generate ? 0.642430 0.755440 0.128790 0.179670 -0.311850 0.932990 0.744980 -0.576240 -0.336070 88.07400 -225.62000 10.98100 7 generate ? -0.167740 0.641660 0.748420 0.644170 -0.503350 0.575920 0.746260 0.578720 -0.328900 114.36040 -259.43359 96.11140 8 generate ? -0.333850 -0.362400 0.870180 0.933960 -0.002260 0.357380 -0.127550 0.932020 0.339220 47.04000 -234.81619 160.03540 9 generate ? 0.371840 -0.867700 0.329890 0.645190 0.497080 0.580210 -0.667430 -0.002900 0.744670 -20.67300 -185.70000 114.20000 10 generate ? 0.976000 -0.177090 -0.126750 0.176780 0.304320 0.936020 -0.127190 -0.935960 0.328320 4.35730 -179.69000 21.93700 # _database_PDB_matrix.entry_id 3RA9 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3RA9 _struct.title 'Structural studies of AAV8 capsid transitions associated with endosomal trafficking' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3RA9 _struct_keywords.pdbx_keywords VIRUS _struct_keywords.text 'Beta Barrel, Viral Capsid, VIRUS' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q8JQF8_9VIRU Q8JQF8 1 ;DGVGSSSGNWHCDSTWLGDRVITTSTRTWALPTYNNHLYKQISNGTSGGATNDNTYFGYSTPWGYFDFNRFHCHFSPRDW QRLINNNWGFRPKRLSFKLFNIQVKEVTQNEGTKTIANNLTSTIQVFTDSEYQLPYVLGSAHQGCLPPFPADVFMIPQYG YLTLNNGSQAVGRSSFYCLEYFPSQMLRTGNNFQFTYTFEDVPFHSSYAHSQSLDRLMNPLIDQYLYYLSRTQTTGGTAN TQTLGFSQGGPNTMANQAKNWLPGPCYRQQRVSTTTGQNNNSNFAWTAGTKYHLNGRNSLANPGIAMATHKDDEERFFPS NGILIFGKQNAARDNADYSDVMLTSEEEIKTTNPVATEEYGIVADNLQQQNTAPQIGTVNSQGALPGMVWQNRDVYLQGP IWAKIPHTDGNFHPSPLMGGFGLKHPPPQILIKNTPVPADPPTTFNQSKLNSFITQYSTGQVSVEIEWELQKENSKRWNP EIQYTSNYYKSTSVDFAVNTEGVYSEPRPIGTRYLTRNL ; 220 ? 2 PDB 3RA9 3RA9 2 CA ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3RA9 A 1 ? 519 ? Q8JQF8 220 ? 738 ? 220 738 2 2 3RA9 D 1 ? 2 ? 3RA9 1 ? 2 ? 1 2 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 'complete icosahedral assembly' ? 120-meric 120 2 'icosahedral asymmetric unit' ? dimeric 2 3 'icosahedral pentamer' ? decameric 10 4 'icosahedral 23 hexamer' ? dodecameric 12 5 'icosahedral asymmetric unit, std point frame' ? dimeric 2 6 'crystal asymmetric unit, crystal frame' ? eicosameric 20 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 '(1-60)' A,B,C 2 1 A,B,C 3 '(1-5)' A,B,C 4 '(1,2,6,10,23,24)' A,B,C 5 P A,B,C 6 '(X0)(1-5,21-25)' A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] P 'transform to point frame' ? ? -0.46722433 -0.80882166 0.35708396 -39.99909 -0.86589890 0.50021904 0.00005308 148.94222 -0.17866313 -0.30917381 -0.93407229 104.77534 X0 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 1 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 2 'point symmetry operation' ? ? 0.56378512 0.75566148 0.33334979 75.15697 -0.75564616 0.30901699 0.57750097 -18.73640 0.33338448 -0.57748095 0.74523187 -57.43655 3 'point symmetry operation' ? ? -0.14202538 0.46703978 0.87275577 84.22451 -0.46699970 -0.80901700 0.35693525 -114.48801 0.87277721 -0.35688283 0.33300838 -64.36401 4 'point symmetry operation' ? ? -0.14202538 -0.46699971 0.87277722 14.67159 0.46703977 -0.80901699 -0.35688282 -154.92935 0.87275577 0.35693526 0.33300838 -11.20887 5 'point symmetry operation' ? ? 0.56378512 -0.75564617 0.33338448 -37.38202 0.75566146 0.30901700 -0.57748094 -84.17187 0.33334979 0.57750098 0.74523187 28.57028 6 'point symmetry operation' ? ? -0.93615897 0.11047592 0.33376855 220.56071 0.11047592 -0.80882311 0.57758137 -213.71173 0.33376856 0.57758138 0.74498208 28.55025 7 'point symmetry operation' ? ? -0.49999995 -0.86602532 0.00046652 128.96141 0.86602542 -0.49999993 0.00016304 -223.42854 0.00009207 0.00048554 0.99999988 0.02429 8 'point symmetry operation' ? ? 0.37267170 -0.64571664 -0.66645767 107.58233 0.86612963 0.49981942 0.00006045 -148.98185 0.33306945 -0.57726127 0.74554287 -57.41443 9 'point symmetry operation' ? ? 0.47585341 0.46694284 -0.74533745 185.96864 0.11064453 0.80891858 0.57741538 -93.25446 0.87253728 -0.35723259 0.33326200 -64.38754 10 'point symmetry operation' ? ? -0.33304843 0.93429555 -0.12716365 255.79312 -0.35637515 0.00013301 0.93434294 -133.25973 0.87296936 0.35649941 0.33291541 -11.25845 11 'point symmetry operation' ? ? 0.49956182 -0.86627824 -0.00009192 0.06188 -0.86627823 -0.49956183 0.00005310 0.08332 -0.00009193 0.00005311 -0.99999999 224.30155 12 'point symmetry operation' ? ? 0.93621470 0.10985801 -0.33381620 53.84366 -0.11088510 -0.80901684 -0.57723153 -55.66658 -0.33347644 0.57742789 -0.74523184 281.73019 13 'point symmetry operation' ? ? 0.33352100 0.93418187 0.12675961 141.32162 0.35637506 -0.00045134 -0.93434287 -15.68812 -0.87278895 0.35679693 -0.33306966 288.65174 14 'point symmetry operation' ? ? -0.47561708 0.46750578 0.74513539 141.60421 -0.11023540 0.80872464 -0.57776518 64.76984 -0.87271791 -0.35693529 -0.33310757 235.50084 15 'point symmetry operation' ? ? -0.37299820 -0.64523976 0.66673683 54.30089 -0.86587669 0.50025740 -0.00027671 74.51712 -0.33336149 -0.57741510 -0.74529318 195.73024 16 'point symmetry operation' ? ? -0.56340285 0.75580232 -0.33367663 295.37679 0.75580231 0.30838494 -0.57763448 -84.21989 -0.33367663 -0.57763448 -0.74498209 195.71967 17 'point symmetry operation' ? ? -0.99999987 0.00050583 -0.00000011 258.03736 0.00050583 0.99999978 -0.00043248 -0.01677 -0.00000011 -0.00043248 -0.99999991 224.25354 18 'point symmetry operation' ? ? -0.56416731 -0.75550501 -0.33305771 182.87092 -0.75550499 0.30964891 0.57734716 -18.69031 -0.33305771 0.57734717 -0.74548160 281.69817 19 'point symmetry operation' ? ? 0.14178904 -0.46744891 -0.87257515 173.75495 -0.46744890 -0.80862623 0.35723262 -114.43431 -0.87257515 0.35723263 -0.33316282 288.66705 20 'point symmetry operation' ? ? 0.14226151 0.46659039 -0.87295766 243.28740 0.46659038 -0.80940740 -0.35658528 -154.93382 -0.87295766 -0.35658529 -0.33285410 235.52941 21 'point symmetry operation' ? ? 0.64274900 0.75544062 0.12721321 88.07094 0.17850536 -0.30917615 0.93410167 -225.26398 0.74498963 -0.57768469 -0.33357286 10.43154 22 'point symmetry operation' ? ? -0.16606256 0.64568144 0.74533127 114.91708 0.64568144 -0.50007698 0.57707754 -259.70678 0.74533127 0.57707755 -0.33386046 96.40571 23 'point symmetry operation' ? ? -0.33304843 -0.35637516 0.87296936 47.52932 0.93429553 0.00013302 0.35649941 -234.95502 -0.12716364 0.93434295 0.33291541 160.78598 24 'point symmetry operation' ? ? 0.37256020 -0.86592102 0.33373597 -20.96475 0.64549278 0.50018063 0.57719876 -185.21478 -0.66673680 0.00038287 0.74529316 114.60101 25 'point symmetry operation' ? ? 0.97563618 -0.17878108 -0.12716668 4.09136 0.17838877 0.30901705 0.93417659 -179.22539 -0.12771643 -0.93410160 0.33338075 21.67685 26 'point symmetry operation' ? ? -0.47579748 -0.46653357 0.74562940 72.02157 0.11050785 0.80930909 0.57689411 -93.14930 -0.87258510 0.35688267 -0.33351161 288.68139 27 'point symmetry operation' ? ? 0.33286802 -0.93429540 0.12763622 2.17686 -0.35692108 0.00045143 0.93413443 -133.14221 -0.87281511 -0.35649954 -0.33331945 235.56959 28 'point symmetry operation' ? ? 0.93621470 -0.11088509 -0.33347643 37.36856 0.10985801 -0.80901684 0.57742789 -213.62923 -0.33381620 -0.57723154 -0.74523184 195.79569 29 'point symmetry operation' ? ? 0.50043795 0.86577229 -0.00046654 128.96295 0.86577227 -0.50043809 -0.00026920 -223.38003 -0.00046655 -0.00026920 -0.99999985 224.32586 30 'point symmetry operation' ? ? -0.37223357 0.64596945 0.66645754 150.37969 0.86617390 0.49974234 -0.00059910 -148.91934 -0.33344404 0.57704512 -0.74554276 281.73238 31 'point symmetry operation' ? ? -0.33334059 -0.93418202 -0.12723217 116.70778 0.35692116 -0.00013310 -0.93413450 -15.75824 0.87263471 -0.35679680 0.33347370 -64.39140 32 'point symmetry operation' ? ? 0.47556135 -0.46709660 -0.74542751 116.46590 -0.11009853 0.80911531 -0.57724408 64.72283 0.87276555 0.35658545 0.33335733 -11.27531 33 'point symmetry operation' ? ? 0.37256020 0.64549279 -0.66673680 203.77415 -0.86592100 0.50018062 0.00038287 74.44315 0.33373597 0.57719876 0.74529316 28.49108 34 'point symmetry operation' ? ? -0.49999995 0.86602544 0.00009206 257.97549 -0.86602530 -0.49999993 0.00048554 -0.03042 0.00046652 0.00016304 0.99999988 -0.04803 35 'point symmetry operation' ? ? -0.93627063 -0.11026728 0.33352426 204.16552 -0.11026728 -0.80921082 -0.57707796 -55.77795 0.33352426 -0.57707796 0.74548145 -57.45256 36 'point symmetry operation' ? ? 0.16638907 0.64527496 -0.74561043 239.19909 -0.64593437 -0.49999984 -0.57686129 36.32322 -0.74503923 0.57759882 0.33361077 213.84995 37 'point symmetry operation' ? ? -0.64236681 0.75571056 -0.12753998 282.43954 -0.17866183 -0.30948976 -0.93396789 30.27787 -0.74528171 -0.57716346 0.33382258 127.87149 38 'point symmetry operation' ? ? -0.97572648 -0.17823254 0.12724388 227.32736 -0.17823254 0.30870321 -0.93431017 76.29280 0.12724388 -0.93431017 -0.33297673 63.49872 39 'point symmetry operation' ? ? -0.37299820 -0.86587671 -0.33336149 150.02570 -0.64523975 0.50025740 -0.57741509 110.77694 0.66673682 -0.00027671 -0.74529318 109.69263 40 'point symmetry operation' ? ? 0.33286802 -0.35692108 -0.87281511 157.36283 -0.93429538 0.00045143 -0.35649954 86.07438 0.12763621 0.93413444 -0.33331945 202.61480 41 'point symmetry operation' ? ? 0.64274900 0.17850536 0.74498964 -24.16807 0.75544060 -0.30917614 -0.57768468 -130.15247 0.12721321 0.93410168 -0.33357286 202.69535 42 'point symmetry operation' ? ? 0.47585342 0.11064453 0.87253729 -21.99518 0.46694283 0.80891858 -0.35723259 -34.40278 -0.74533745 0.57741539 0.33326199 213.91388 43 'point symmetry operation' ? ? 0.47556136 -0.11009853 0.87276556 -38.42009 -0.46709659 0.80911531 0.35658544 6.05321 -0.74542750 -0.57724408 0.33335732 127.93647 44 'point symmetry operation' ? ? 0.64227644 -0.17866440 0.74535898 -50.74413 -0.75586693 -0.30885782 0.57729716 -64.69331 0.12706749 -0.93417658 -0.33341862 63.58098 45 'point symmetry operation' ? ? 0.74560409 -0.00029739 0.66638912 -41.93590 -0.00029739 -0.99999995 -0.00011353 -148.87305 0.66638911 -0.00011353 -0.74560414 109.78451 46 'point symmetry operation' ? ? -0.33334059 0.35692116 0.87263471 100.71806 -0.93418200 -0.00013311 -0.35679680 86.04957 -0.12723217 -0.93413451 0.33347369 21.60151 47 'point symmetry operation' ? ? -0.16671570 -0.64552786 0.74531850 18.85665 -0.64552785 -0.49992313 -0.57738259 36.33495 0.74531850 -0.57738259 -0.33336118 10.38787 48 'point symmetry operation' ? ? 0.64227644 -0.75586695 0.12706750 -24.38685 -0.17866440 -0.30885782 -0.93417657 30.34866 0.74535898 0.57729717 -0.33341862 96.36894 49 'point symmetry operation' ? ? 0.97563618 0.17838877 -0.12771643 30.74861 -0.17878108 0.30901705 -0.93410159 76.36354 -0.12716668 0.93417660 0.33338075 160.72180 50 'point symmetry operation' ? ? 0.37267170 0.86612964 0.33306945 108.06770 -0.64571663 0.49981942 -0.57726127 110.78860 -0.66645767 0.00006045 0.74554287 114.51299 51 'point symmetry operation' ? ? 0.16638907 -0.64593438 -0.74503924 142.98891 0.64527495 -0.49999984 0.57759882 -259.70706 -0.74561042 -0.57686129 0.33361077 127.96014 52 'point symmetry operation' ? ? 0.33352099 0.35637508 -0.87278896 210.38917 0.93418185 -0.00045134 0.35679693 -235.01723 0.12675961 -0.93434288 -0.33306965 63.56918 53 'point symmetry operation' ? ? -0.37223358 0.86617391 -0.33344405 278.90840 0.64596944 0.49974234 0.57704512 -185.29168 0.66645753 -0.00059910 -0.74554275 109.73264 54 'point symmetry operation' ? ? -0.97554581 0.17893747 0.12763916 253.85534 0.17893747 0.30933053 0.93396788 -179.24942 0.12763916 0.93396789 -0.33378472 202.65420 55 'point symmetry operation' ? ? -0.64265871 -0.75559685 -0.12674066 169.85248 0.17850825 -0.30854411 0.93431008 -225.24066 -0.74506683 0.57781826 0.33316883 213.91941 56 'point symmetry operation' ? ? -0.47579748 0.11050785 -0.87258511 296.46049 -0.46653355 0.80930909 0.35688267 5.96167 0.74562939 0.57689412 -0.33351160 96.31447 57 'point symmetry operation' ? ? -0.64265871 0.17850825 -0.74506684 308.74875 -0.75559684 -0.30854411 0.57781826 -64.76323 -0.12674065 0.93431009 0.33316884 160.70055 58 'point symmetry operation' ? ? -0.74560422 -0.00020844 -0.66638901 299.89793 -0.00020844 -0.99999983 0.00054601 -148.95848 -0.66638900 0.00054601 0.74560405 114.53343 59 'point symmetry operation' ? ? -0.64236681 -0.17866183 -0.74528171 282.13957 0.75571054 -0.30948976 -0.57716345 -130.26910 -0.12753998 -0.93396790 0.33382259 21.61450 60 'point symmetry operation' ? ? -0.47561708 -0.11023540 -0.87271791 280.01511 0.46750577 0.80872464 -0.35693528 -34.52319 0.74513538 -0.57776518 -0.33310756 10.35456 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TYR A 34 ? LEU A 38 ? TYR A 253 LEU A 257 5 ? 5 HELX_P HELX_P2 2 THR A 51 ? THR A 55 ? THR A 270 THR A 274 5 ? 5 HELX_P HELX_P3 3 ARG A 70 ? HIS A 74 ? ARG A 289 HIS A 293 5 ? 5 HELX_P HELX_P4 4 SER A 76 ? ASN A 86 ? SER A 295 ASN A 305 1 ? 11 HELX_P HELX_P5 5 CYS A 178 ? PHE A 182 ? CYS A 397 PHE A 401 5 ? 5 HELX_P HELX_P6 6 GLY A 250 ? MET A 254 ? GLY A 469 MET A 473 5 ? 5 HELX_P HELX_P7 7 THR A 275 ? ASN A 279 ? THR A 494 ASN A 498 5 ? 5 HELX_P HELX_P8 8 ASP A 337 ? SER A 339 ? ASP A 556 SER A 558 5 ? 3 HELX_P HELX_P9 9 GLU A 346 ? LYS A 350 ? GLU A 565 LYS A 569 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASN _struct_mon_prot_cis.label_seq_id 302 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASN _struct_mon_prot_cis.auth_seq_id 521 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 303 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 522 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.19 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? C ? 5 ? D ? 3 ? E ? 5 ? F ? 2 ? G ? 2 ? H ? 2 ? I ? 2 ? J ? 2 ? K ? 2 ? L ? 2 ? M ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel E 4 5 ? anti-parallel F 1 2 ? parallel G 1 2 ? anti-parallel H 1 2 ? anti-parallel I 1 2 ? anti-parallel J 1 2 ? anti-parallel K 1 2 ? anti-parallel L 1 2 ? anti-parallel M 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 193 ? THR A 198 ? PHE A 412 THR A 417 A 2 ASN A 87 ? ASN A 110 ? ASN A 306 ASN A 329 A 3 GLN A 456 ? LYS A 472 ? GLN A 675 LYS A 691 A 4 ARG A 20 ? LEU A 31 ? ARG A 239 LEU A 250 A 5 ASP A 13 ? TRP A 16 ? ASP A 232 TRP A 235 B 1 HIS A 205 ? SER A 206 ? HIS A 424 SER A 425 B 2 ASN A 87 ? ASN A 110 ? ASN A 306 ASN A 329 B 3 GLN A 456 ? LYS A 472 ? GLN A 675 LYS A 691 B 4 ARG A 20 ? LEU A 31 ? ARG A 239 LEU A 250 B 5 PHE A 154 ? MET A 155 ? PHE A 373 MET A 374 C 1 THR A 113 ? ASN A 118 ? THR A 332 ASN A 337 C 2 ASN A 87 ? ASN A 110 ? ASN A 306 ASN A 329 C 3 GLN A 456 ? LYS A 472 ? GLN A 675 LYS A 691 C 4 ARG A 20 ? LEU A 31 ? ARG A 239 LEU A 250 C 5 PHE A 154 ? MET A 155 ? PHE A 373 MET A 374 D 1 LYS A 40 ? ASN A 44 ? LYS A 259 ASN A 263 D 2 TYR A 56 ? PHE A 66 ? TYR A 275 PHE A 285 D 3 GLN A 158 ? THR A 163 ? GLN A 377 THR A 382 E 1 LYS A 40 ? ASN A 44 ? LYS A 259 ASN A 263 E 2 TYR A 56 ? PHE A 66 ? TYR A 275 PHE A 285 E 3 ILE A 430 ? ASN A 434 ? ILE A 649 ASN A 653 E 4 ILE A 124 ? THR A 128 ? ILE A 343 THR A 347 E 5 GLN A 185 ? LEU A 187 ? GLN A 404 LEU A 406 F 1 TYR A 208 ? HIS A 210 ? TYR A 427 HIS A 429 F 2 LEU A 515 ? ARG A 517 ? LEU A 734 ARG A 736 G 1 TYR A 227 ? GLN A 233 ? TYR A 446 GLN A 452 G 2 GLN A 242 ? GLN A 248 ? GLN A 461 GLN A 467 H 1 CYS A 266 ? TYR A 267 ? CYS A 485 TYR A 486 H 2 SER A 381 ? GLN A 382 ? SER A 600 GLN A 601 I 1 ARG A 271 ? SER A 273 ? ARG A 490 SER A 492 I 2 PHE A 317 ? PRO A 319 ? PHE A 536 PRO A 538 J 1 LYS A 291 ? LEU A 294 ? LYS A 510 LEU A 513 J 2 ARG A 297 ? LEU A 300 ? ARG A 516 LEU A 519 K 1 ILE A 325 ? GLY A 327 ? ILE A 544 GLY A 546 K 2 VAL A 341 ? LEU A 343 ? VAL A 560 LEU A 562 L 1 GLY A 361 ? ALA A 364 ? GLY A 580 ALA A 583 L 2 ILE A 376 ? VAL A 379 ? ILE A 595 VAL A 598 M 1 TRP A 402 ? LYS A 404 ? TRP A 621 LYS A 623 M 2 PHE A 421 ? LEU A 423 ? PHE A 640 LEU A 642 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 193 ? O PHE A 412 N LEU A 99 ? N LEU A 318 A 2 3 N ARG A 91 ? N ARG A 310 O GLU A 469 ? O GLU A 688 A 3 4 O SER A 458 ? O SER A 677 N LEU A 31 ? N LEU A 250 A 4 5 O THR A 24 ? O THR A 243 N ASP A 13 ? N ASP A 232 B 1 2 O HIS A 205 ? O HIS A 424 N PHE A 90 ? N PHE A 309 B 2 3 N ARG A 91 ? N ARG A 310 O GLU A 469 ? O GLU A 688 B 3 4 O SER A 458 ? O SER A 677 N LEU A 31 ? N LEU A 250 B 4 5 N THR A 28 ? N THR A 247 O PHE A 154 ? O PHE A 373 C 1 2 O ALA A 117 ? O ALA A 336 N GLU A 106 ? N GLU A 325 C 2 3 N ARG A 91 ? N ARG A 310 O GLU A 469 ? O GLU A 688 C 3 4 O SER A 458 ? O SER A 677 N LEU A 31 ? N LEU A 250 C 4 5 N THR A 28 ? N THR A 247 O PHE A 154 ? O PHE A 373 D 1 2 N ILE A 42 ? N ILE A 261 O GLY A 58 ? O GLY A 277 D 2 3 N TRP A 63 ? N TRP A 282 O TYR A 159 ? O TYR A 378 E 1 2 N ILE A 42 ? N ILE A 261 O GLY A 58 ? O GLY A 277 E 2 3 N GLY A 64 ? N GLY A 283 O ILE A 432 ? O ILE A 651 E 3 4 O LYS A 433 ? O LYS A 652 N GLN A 125 ? N GLN A 344 E 4 5 N VAL A 126 ? N VAL A 345 O GLN A 185 ? O GLN A 404 F 1 2 N ALA A 209 ? N ALA A 428 O LEU A 515 ? O LEU A 734 G 1 2 N SER A 230 ? N SER A 449 O GLY A 245 ? O GLY A 464 H 1 2 N CYS A 266 ? N CYS A 485 O GLN A 382 ? O GLN A 601 I 1 2 N VAL A 272 ? N VAL A 491 O PHE A 318 ? O PHE A 537 J 1 2 N LEU A 294 ? N LEU A 513 O ARG A 297 ? O ARG A 516 K 1 2 N PHE A 326 ? N PHE A 545 O MET A 342 ? O MET A 561 L 1 2 N VAL A 363 ? N VAL A 582 O GLY A 377 ? O GLY A 596 M 1 2 N ALA A 403 ? N ALA A 622 O LEU A 423 ? O LEU A 642 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 DC _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 DC _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.520 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.087 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 HIS _pdbx_validate_rmsd_angle.auth_seq_id_1 632 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 633 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CD _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 633 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 112.03 _pdbx_validate_rmsd_angle.angle_target_value 128.40 _pdbx_validate_rmsd_angle.angle_deviation -16.37 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.10 _pdbx_validate_rmsd_angle.linker_flag Y # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id PRO _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 633 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -50.52 _pdbx_validate_torsion.psi 6.24 # _pdbx_point_symmetry.entry_id 3RA9 _pdbx_point_symmetry.Schoenflies_symbol I _pdbx_point_symmetry.circular_symmetry ? _pdbx_point_symmetry.H-M_notation ? # _pdbx_entry_details.entry_id 3RA9 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ;THE VIRUS CAPSID IS FROM AAV8 VIRUS BUT THE GENE ENCAPSULATED BY THE VIRUS WAS GFP. ONLY TWO RESIDUE WAS OBSERVED IN THE ELECTRON DENSITY MAP FROM THE GENE CODING GFP IN THIS STRUCTURE ; _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 GLN N N N N 158 GLN CA C N S 159 GLN C C N N 160 GLN O O N N 161 GLN CB C N N 162 GLN CG C N N 163 GLN CD C N N 164 GLN OE1 O N N 165 GLN NE2 N N N 166 GLN OXT O N N 167 GLN H H N N 168 GLN H2 H N N 169 GLN HA H N N 170 GLN HB2 H N N 171 GLN HB3 H N N 172 GLN HG2 H N N 173 GLN HG3 H N N 174 GLN HE21 H N N 175 GLN HE22 H N N 176 GLN HXT H N N 177 GLU N N N N 178 GLU CA C N S 179 GLU C C N N 180 GLU O O N N 181 GLU CB C N N 182 GLU CG C N N 183 GLU CD C N N 184 GLU OE1 O N N 185 GLU OE2 O N N 186 GLU OXT O N N 187 GLU H H N N 188 GLU H2 H N N 189 GLU HA H N N 190 GLU HB2 H N N 191 GLU HB3 H N N 192 GLU HG2 H N N 193 GLU HG3 H N N 194 GLU HE2 H N N 195 GLU HXT H N N 196 GLY N N N N 197 GLY CA C N N 198 GLY C C N N 199 GLY O O N N 200 GLY OXT O N N 201 GLY H H N N 202 GLY H2 H N N 203 GLY HA2 H N N 204 GLY HA3 H N N 205 GLY HXT H N N 206 HIS N N N N 207 HIS CA C N S 208 HIS C C N N 209 HIS O O N N 210 HIS CB C N N 211 HIS CG C Y N 212 HIS ND1 N Y N 213 HIS CD2 C Y N 214 HIS CE1 C Y N 215 HIS NE2 N Y N 216 HIS OXT O N N 217 HIS H H N N 218 HIS H2 H N N 219 HIS HA H N N 220 HIS HB2 H N N 221 HIS HB3 H N N 222 HIS HD1 H N N 223 HIS HD2 H N N 224 HIS HE1 H N N 225 HIS HE2 H N N 226 HIS HXT H N N 227 HOH O O N N 228 HOH H1 H N N 229 HOH H2 H N N 230 ILE N N N N 231 ILE CA C N S 232 ILE C C N N 233 ILE O O N N 234 ILE CB C N S 235 ILE CG1 C N N 236 ILE CG2 C N N 237 ILE CD1 C N N 238 ILE OXT O N N 239 ILE H H N N 240 ILE H2 H N N 241 ILE HA H N N 242 ILE HB H N N 243 ILE HG12 H N N 244 ILE HG13 H N N 245 ILE HG21 H N N 246 ILE HG22 H N N 247 ILE HG23 H N N 248 ILE HD11 H N N 249 ILE HD12 H N N 250 ILE HD13 H N N 251 ILE HXT H N N 252 LEU N N N N 253 LEU CA C N S 254 LEU C C N N 255 LEU O O N N 256 LEU CB C N N 257 LEU CG C N N 258 LEU CD1 C N N 259 LEU CD2 C N N 260 LEU OXT O N N 261 LEU H H N N 262 LEU H2 H N N 263 LEU HA H N N 264 LEU HB2 H N N 265 LEU HB3 H N N 266 LEU HG H N N 267 LEU HD11 H N N 268 LEU HD12 H N N 269 LEU HD13 H N N 270 LEU HD21 H N N 271 LEU HD22 H N N 272 LEU HD23 H N N 273 LEU HXT H N N 274 LYS N N N N 275 LYS CA C N S 276 LYS C C N N 277 LYS O O N N 278 LYS CB C N N 279 LYS CG C N N 280 LYS CD C N N 281 LYS CE C N N 282 LYS NZ N N N 283 LYS OXT O N N 284 LYS H H N N 285 LYS H2 H N N 286 LYS HA H N N 287 LYS HB2 H N N 288 LYS HB3 H N N 289 LYS HG2 H N N 290 LYS HG3 H N N 291 LYS HD2 H N N 292 LYS HD3 H N N 293 LYS HE2 H N N 294 LYS HE3 H N N 295 LYS HZ1 H N N 296 LYS HZ2 H N N 297 LYS HZ3 H N N 298 LYS HXT H N N 299 MET N N N N 300 MET CA C N S 301 MET C C N N 302 MET O O N N 303 MET CB C N N 304 MET CG C N N 305 MET SD S N N 306 MET CE C N N 307 MET OXT O N N 308 MET H H N N 309 MET H2 H N N 310 MET HA H N N 311 MET HB2 H N N 312 MET HB3 H N N 313 MET HG2 H N N 314 MET HG3 H N N 315 MET HE1 H N N 316 MET HE2 H N N 317 MET HE3 H N N 318 MET HXT H N N 319 PHE N N N N 320 PHE CA C N S 321 PHE C C N N 322 PHE O O N N 323 PHE CB C N N 324 PHE CG C Y N 325 PHE CD1 C Y N 326 PHE CD2 C Y N 327 PHE CE1 C Y N 328 PHE CE2 C Y N 329 PHE CZ C Y N 330 PHE OXT O N N 331 PHE H H N N 332 PHE H2 H N N 333 PHE HA H N N 334 PHE HB2 H N N 335 PHE HB3 H N N 336 PHE HD1 H N N 337 PHE HD2 H N N 338 PHE HE1 H N N 339 PHE HE2 H N N 340 PHE HZ H N N 341 PHE HXT H N N 342 PRO N N N N 343 PRO CA C N S 344 PRO C C N N 345 PRO O O N N 346 PRO CB C N N 347 PRO CG C N N 348 PRO CD C N N 349 PRO OXT O N N 350 PRO H H N N 351 PRO HA H N N 352 PRO HB2 H N N 353 PRO HB3 H N N 354 PRO HG2 H N N 355 PRO HG3 H N N 356 PRO HD2 H N N 357 PRO HD3 H N N 358 PRO HXT H N N 359 SER N N N N 360 SER CA C N S 361 SER C C N N 362 SER O O N N 363 SER CB C N N 364 SER OG O N N 365 SER OXT O N N 366 SER H H N N 367 SER H2 H N N 368 SER HA H N N 369 SER HB2 H N N 370 SER HB3 H N N 371 SER HG H N N 372 SER HXT H N N 373 THR N N N N 374 THR CA C N S 375 THR C C N N 376 THR O O N N 377 THR CB C N R 378 THR OG1 O N N 379 THR CG2 C N N 380 THR OXT O N N 381 THR H H N N 382 THR H2 H N N 383 THR HA H N N 384 THR HB H N N 385 THR HG1 H N N 386 THR HG21 H N N 387 THR HG22 H N N 388 THR HG23 H N N 389 THR HXT H N N 390 TRP N N N N 391 TRP CA C N S 392 TRP C C N N 393 TRP O O N N 394 TRP CB C N N 395 TRP CG C Y N 396 TRP CD1 C Y N 397 TRP CD2 C Y N 398 TRP NE1 N Y N 399 TRP CE2 C Y N 400 TRP CE3 C Y N 401 TRP CZ2 C Y N 402 TRP CZ3 C Y N 403 TRP CH2 C Y N 404 TRP OXT O N N 405 TRP H H N N 406 TRP H2 H N N 407 TRP HA H N N 408 TRP HB2 H N N 409 TRP HB3 H N N 410 TRP HD1 H N N 411 TRP HE1 H N N 412 TRP HE3 H N N 413 TRP HZ2 H N N 414 TRP HZ3 H N N 415 TRP HH2 H N N 416 TRP HXT H N N 417 TYR N N N N 418 TYR CA C N S 419 TYR C C N N 420 TYR O O N N 421 TYR CB C N N 422 TYR CG C Y N 423 TYR CD1 C Y N 424 TYR CD2 C Y N 425 TYR CE1 C Y N 426 TYR CE2 C Y N 427 TYR CZ C Y N 428 TYR OH O N N 429 TYR OXT O N N 430 TYR H H N N 431 TYR H2 H N N 432 TYR HA H N N 433 TYR HB2 H N N 434 TYR HB3 H N N 435 TYR HD1 H N N 436 TYR HD2 H N N 437 TYR HE1 H N N 438 TYR HE2 H N N 439 TYR HH H N N 440 TYR HXT H N N 441 VAL N N N N 442 VAL CA C N S 443 VAL C C N N 444 VAL O O N N 445 VAL CB C N N 446 VAL CG1 C N N 447 VAL CG2 C N N 448 VAL OXT O N N 449 VAL H H N N 450 VAL H2 H N N 451 VAL HA H N N 452 VAL HB H N N 453 VAL HG11 H N N 454 VAL HG12 H N N 455 VAL HG13 H N N 456 VAL HG21 H N N 457 VAL HG22 H N N 458 VAL HG23 H N N 459 VAL HXT H N N 460 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 GLN N CA sing N N 156 GLN N H sing N N 157 GLN N H2 sing N N 158 GLN CA C sing N N 159 GLN CA CB sing N N 160 GLN CA HA sing N N 161 GLN C O doub N N 162 GLN C OXT sing N N 163 GLN CB CG sing N N 164 GLN CB HB2 sing N N 165 GLN CB HB3 sing N N 166 GLN CG CD sing N N 167 GLN CG HG2 sing N N 168 GLN CG HG3 sing N N 169 GLN CD OE1 doub N N 170 GLN CD NE2 sing N N 171 GLN NE2 HE21 sing N N 172 GLN NE2 HE22 sing N N 173 GLN OXT HXT sing N N 174 GLU N CA sing N N 175 GLU N H sing N N 176 GLU N H2 sing N N 177 GLU CA C sing N N 178 GLU CA CB sing N N 179 GLU CA HA sing N N 180 GLU C O doub N N 181 GLU C OXT sing N N 182 GLU CB CG sing N N 183 GLU CB HB2 sing N N 184 GLU CB HB3 sing N N 185 GLU CG CD sing N N 186 GLU CG HG2 sing N N 187 GLU CG HG3 sing N N 188 GLU CD OE1 doub N N 189 GLU CD OE2 sing N N 190 GLU OE2 HE2 sing N N 191 GLU OXT HXT sing N N 192 GLY N CA sing N N 193 GLY N H sing N N 194 GLY N H2 sing N N 195 GLY CA C sing N N 196 GLY CA HA2 sing N N 197 GLY CA HA3 sing N N 198 GLY C O doub N N 199 GLY C OXT sing N N 200 GLY OXT HXT sing N N 201 HIS N CA sing N N 202 HIS N H sing N N 203 HIS N H2 sing N N 204 HIS CA C sing N N 205 HIS CA CB sing N N 206 HIS CA HA sing N N 207 HIS C O doub N N 208 HIS C OXT sing N N 209 HIS CB CG sing N N 210 HIS CB HB2 sing N N 211 HIS CB HB3 sing N N 212 HIS CG ND1 sing Y N 213 HIS CG CD2 doub Y N 214 HIS ND1 CE1 doub Y N 215 HIS ND1 HD1 sing N N 216 HIS CD2 NE2 sing Y N 217 HIS CD2 HD2 sing N N 218 HIS CE1 NE2 sing Y N 219 HIS CE1 HE1 sing N N 220 HIS NE2 HE2 sing N N 221 HIS OXT HXT sing N N 222 HOH O H1 sing N N 223 HOH O H2 sing N N 224 ILE N CA sing N N 225 ILE N H sing N N 226 ILE N H2 sing N N 227 ILE CA C sing N N 228 ILE CA CB sing N N 229 ILE CA HA sing N N 230 ILE C O doub N N 231 ILE C OXT sing N N 232 ILE CB CG1 sing N N 233 ILE CB CG2 sing N N 234 ILE CB HB sing N N 235 ILE CG1 CD1 sing N N 236 ILE CG1 HG12 sing N N 237 ILE CG1 HG13 sing N N 238 ILE CG2 HG21 sing N N 239 ILE CG2 HG22 sing N N 240 ILE CG2 HG23 sing N N 241 ILE CD1 HD11 sing N N 242 ILE CD1 HD12 sing N N 243 ILE CD1 HD13 sing N N 244 ILE OXT HXT sing N N 245 LEU N CA sing N N 246 LEU N H sing N N 247 LEU N H2 sing N N 248 LEU CA C sing N N 249 LEU CA CB sing N N 250 LEU CA HA sing N N 251 LEU C O doub N N 252 LEU C OXT sing N N 253 LEU CB CG sing N N 254 LEU CB HB2 sing N N 255 LEU CB HB3 sing N N 256 LEU CG CD1 sing N N 257 LEU CG CD2 sing N N 258 LEU CG HG sing N N 259 LEU CD1 HD11 sing N N 260 LEU CD1 HD12 sing N N 261 LEU CD1 HD13 sing N N 262 LEU CD2 HD21 sing N N 263 LEU CD2 HD22 sing N N 264 LEU CD2 HD23 sing N N 265 LEU OXT HXT sing N N 266 LYS N CA sing N N 267 LYS N H sing N N 268 LYS N H2 sing N N 269 LYS CA C sing N N 270 LYS CA CB sing N N 271 LYS CA HA sing N N 272 LYS C O doub N N 273 LYS C OXT sing N N 274 LYS CB CG sing N N 275 LYS CB HB2 sing N N 276 LYS CB HB3 sing N N 277 LYS CG CD sing N N 278 LYS CG HG2 sing N N 279 LYS CG HG3 sing N N 280 LYS CD CE sing N N 281 LYS CD HD2 sing N N 282 LYS CD HD3 sing N N 283 LYS CE NZ sing N N 284 LYS CE HE2 sing N N 285 LYS CE HE3 sing N N 286 LYS NZ HZ1 sing N N 287 LYS NZ HZ2 sing N N 288 LYS NZ HZ3 sing N N 289 LYS OXT HXT sing N N 290 MET N CA sing N N 291 MET N H sing N N 292 MET N H2 sing N N 293 MET CA C sing N N 294 MET CA CB sing N N 295 MET CA HA sing N N 296 MET C O doub N N 297 MET C OXT sing N N 298 MET CB CG sing N N 299 MET CB HB2 sing N N 300 MET CB HB3 sing N N 301 MET CG SD sing N N 302 MET CG HG2 sing N N 303 MET CG HG3 sing N N 304 MET SD CE sing N N 305 MET CE HE1 sing N N 306 MET CE HE2 sing N N 307 MET CE HE3 sing N N 308 MET OXT HXT sing N N 309 PHE N CA sing N N 310 PHE N H sing N N 311 PHE N H2 sing N N 312 PHE CA C sing N N 313 PHE CA CB sing N N 314 PHE CA HA sing N N 315 PHE C O doub N N 316 PHE C OXT sing N N 317 PHE CB CG sing N N 318 PHE CB HB2 sing N N 319 PHE CB HB3 sing N N 320 PHE CG CD1 doub Y N 321 PHE CG CD2 sing Y N 322 PHE CD1 CE1 sing Y N 323 PHE CD1 HD1 sing N N 324 PHE CD2 CE2 doub Y N 325 PHE CD2 HD2 sing N N 326 PHE CE1 CZ doub Y N 327 PHE CE1 HE1 sing N N 328 PHE CE2 CZ sing Y N 329 PHE CE2 HE2 sing N N 330 PHE CZ HZ sing N N 331 PHE OXT HXT sing N N 332 PRO N CA sing N N 333 PRO N CD sing N N 334 PRO N H sing N N 335 PRO CA C sing N N 336 PRO CA CB sing N N 337 PRO CA HA sing N N 338 PRO C O doub N N 339 PRO C OXT sing N N 340 PRO CB CG sing N N 341 PRO CB HB2 sing N N 342 PRO CB HB3 sing N N 343 PRO CG CD sing N N 344 PRO CG HG2 sing N N 345 PRO CG HG3 sing N N 346 PRO CD HD2 sing N N 347 PRO CD HD3 sing N N 348 PRO OXT HXT sing N N 349 SER N CA sing N N 350 SER N H sing N N 351 SER N H2 sing N N 352 SER CA C sing N N 353 SER CA CB sing N N 354 SER CA HA sing N N 355 SER C O doub N N 356 SER C OXT sing N N 357 SER CB OG sing N N 358 SER CB HB2 sing N N 359 SER CB HB3 sing N N 360 SER OG HG sing N N 361 SER OXT HXT sing N N 362 THR N CA sing N N 363 THR N H sing N N 364 THR N H2 sing N N 365 THR CA C sing N N 366 THR CA CB sing N N 367 THR CA HA sing N N 368 THR C O doub N N 369 THR C OXT sing N N 370 THR CB OG1 sing N N 371 THR CB CG2 sing N N 372 THR CB HB sing N N 373 THR OG1 HG1 sing N N 374 THR CG2 HG21 sing N N 375 THR CG2 HG22 sing N N 376 THR CG2 HG23 sing N N 377 THR OXT HXT sing N N 378 TRP N CA sing N N 379 TRP N H sing N N 380 TRP N H2 sing N N 381 TRP CA C sing N N 382 TRP CA CB sing N N 383 TRP CA HA sing N N 384 TRP C O doub N N 385 TRP C OXT sing N N 386 TRP CB CG sing N N 387 TRP CB HB2 sing N N 388 TRP CB HB3 sing N N 389 TRP CG CD1 doub Y N 390 TRP CG CD2 sing Y N 391 TRP CD1 NE1 sing Y N 392 TRP CD1 HD1 sing N N 393 TRP CD2 CE2 doub Y N 394 TRP CD2 CE3 sing Y N 395 TRP NE1 CE2 sing Y N 396 TRP NE1 HE1 sing N N 397 TRP CE2 CZ2 sing Y N 398 TRP CE3 CZ3 doub Y N 399 TRP CE3 HE3 sing N N 400 TRP CZ2 CH2 doub Y N 401 TRP CZ2 HZ2 sing N N 402 TRP CZ3 CH2 sing Y N 403 TRP CZ3 HZ3 sing N N 404 TRP CH2 HH2 sing N N 405 TRP OXT HXT sing N N 406 TYR N CA sing N N 407 TYR N H sing N N 408 TYR N H2 sing N N 409 TYR CA C sing N N 410 TYR CA CB sing N N 411 TYR CA HA sing N N 412 TYR C O doub N N 413 TYR C OXT sing N N 414 TYR CB CG sing N N 415 TYR CB HB2 sing N N 416 TYR CB HB3 sing N N 417 TYR CG CD1 doub Y N 418 TYR CG CD2 sing Y N 419 TYR CD1 CE1 sing Y N 420 TYR CD1 HD1 sing N N 421 TYR CD2 CE2 doub Y N 422 TYR CD2 HD2 sing N N 423 TYR CE1 CZ doub Y N 424 TYR CE1 HE1 sing N N 425 TYR CE2 CZ sing Y N 426 TYR CE2 HE2 sing N N 427 TYR CZ OH sing N N 428 TYR OH HH sing N N 429 TYR OXT HXT sing N N 430 VAL N CA sing N N 431 VAL N H sing N N 432 VAL N H2 sing N N 433 VAL CA C sing N N 434 VAL CA CB sing N N 435 VAL CA HA sing N N 436 VAL C O doub N N 437 VAL C OXT sing N N 438 VAL CB CG1 sing N N 439 VAL CB CG2 sing N N 440 VAL CB HB sing N N 441 VAL CG1 HG11 sing N N 442 VAL CG1 HG12 sing N N 443 VAL CG1 HG13 sing N N 444 VAL CG2 HG21 sing N N 445 VAL CG2 HG22 sing N N 446 VAL CG2 HG23 sing N N 447 VAL OXT HXT sing N N 448 # _atom_sites.entry_id 3RA9 _atom_sites.fract_transf_matrix[1][1] 0.003877 _atom_sites.fract_transf_matrix[1][2] 0.002238 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.004477 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.002229 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_