HEADER LIGASE 27-MAR-11 3RAC TITLE CRYSTAL STRUCTURE OF HISTIDINE--TRNA LIGASE SUBUNIT FROM TITLE 2 ALICYCLOBACILLUS ACIDOCALDARIUS SUBSP. ACIDOCALDARIUS DSM 446. COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTIDINE-TRNA LIGASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ATP PHOSPHORIBOSYLTRANSFERASE REGULATORY SUBUNIT; COMPND 5 EC: 6.1.1.21; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ALICYCLOBACILLUS ACIDOCALDARIUS SUBSP. SOURCE 3 ACIDOCALDARIUS; SOURCE 4 ORGANISM_TAXID: 521098; SOURCE 5 STRAIN: DSM 446; SOURCE 6 GENE: AACI_0923; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21 MAGIC; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, MCSG, PSI-BIO, PROTEIN STRUCTURE INITIATIVE, CENTER FOR KEYWDS 3 STRUCTURAL GENOMICS, LPHA-BETA-ALPHA FOLD AND LPHA FOLD, KEYWDS 4 TRANSFERASE, CYTOSOL, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR R.WU,J.BEDEAN,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL GENOMICS AUTHOR 2 (MCSG) REVDAT 4 21-FEB-24 3RAC 1 REMARK REVDAT 3 09-SEP-20 3RAC 1 TITLE REMARK SEQADV LINK REVDAT 2 12-SEP-12 3RAC 1 AUTHOR JRNL REVDAT 1 14-SEP-11 3RAC 0 JRNL AUTH R.WU,J.BEDEAN,A.JOACHIMIAK, JRNL AUTH 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) JRNL TITL CRYSTAL STRUCUTRE OF HISTIDINE--TRNA LIGASE SUBUNIT FROM JRNL TITL 2 ALICYCLOBACILLUS ACIDOCALDARIUS SUBSP. ACIDOCALDARIUS DSM JRNL TITL 3 446. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.3 REMARK 3 NUMBER OF REFLECTIONS : 33816 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 1720 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.7493 - 4.9541 0.98 3429 169 0.1875 0.2027 REMARK 3 2 4.9541 - 3.9335 1.00 3522 143 0.1440 0.1903 REMARK 3 3 3.9335 - 3.4367 0.99 3435 192 0.1762 0.2352 REMARK 3 4 3.4367 - 3.1226 0.98 3419 177 0.1956 0.2490 REMARK 3 5 3.1226 - 2.8989 0.96 3348 167 0.1999 0.2584 REMARK 3 6 2.8989 - 2.7281 0.93 3242 179 0.2245 0.3046 REMARK 3 7 2.7281 - 2.5915 0.90 3105 187 0.2350 0.2941 REMARK 3 8 2.5915 - 2.4787 0.86 2957 183 0.2312 0.2604 REMARK 3 9 2.4787 - 2.3833 0.83 2862 155 0.2530 0.3026 REMARK 3 10 2.3833 - 2.3010 0.79 2777 168 0.2907 0.3440 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 43.93 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 51.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 8.55020 REMARK 3 B22 (A**2) : 8.55020 REMARK 3 B33 (A**2) : -17.10040 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2709 REMARK 3 ANGLE : 1.094 3670 REMARK 3 CHIRALITY : 0.073 400 REMARK 3 PLANARITY : 0.004 487 REMARK 3 DIHEDRAL : 14.962 993 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A RESID 15:365 REMARK 3 ORIGIN FOR THE GROUP (A): 35.0197 4.6679 -3.7711 REMARK 3 T TENSOR REMARK 3 T11: 0.3659 T22: 0.2130 REMARK 3 T33: 0.2797 T12: -0.0418 REMARK 3 T13: 0.0218 T23: -0.0063 REMARK 3 L TENSOR REMARK 3 L11: 1.0911 L22: 0.4953 REMARK 3 L33: 1.5596 L12: -0.7061 REMARK 3 L13: -0.4535 L23: 0.3615 REMARK 3 S TENSOR REMARK 3 S11: -0.1122 S12: 0.0132 S13: -0.0675 REMARK 3 S21: 0.0443 S22: 0.0356 S23: 0.0352 REMARK 3 S31: 0.3208 S32: 0.1150 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3RAC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-APR-11. REMARK 100 THE DEPOSITION ID IS D_1000064687. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-OCT-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97920 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC-3 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33816 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 7.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10500 REMARK 200 FOR THE DATA SET : 24.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.86800 REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.045M DL-MALIC ACID, 0.075M SODIUM REMARK 280 FORMATE 0.1M NA-HEPES 7.0, 10% PEG3350, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 298K, PH 7.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 88.82150 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 34.63800 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 34.63800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 44.41075 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 34.63800 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 34.63800 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 133.23225 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 34.63800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.63800 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 44.41075 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 34.63800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.63800 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 133.23225 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 88.82150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -65.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 C ACY A 406 LIES ON A SPECIAL POSITION. REMARK 375 CH3 ACY A 406 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 GLY A 3 REMARK 465 THR A 4 REMARK 465 ARG A 5 REMARK 465 SER A 6 REMARK 465 ALA A 7 REMARK 465 TRP A 8 REMARK 465 GLY A 9 REMARK 465 ALA A 10 REMARK 465 ARG A 11 REMARK 465 ALA A 12 REMARK 465 TRP A 13 REMARK 465 GLU A 14 REMARK 465 ASP A 128 REMARK 465 ASP A 129 REMARK 465 PRO A 130 REMARK 465 ALA A 131 REMARK 465 SER A 132 REMARK 465 LEU A 133 REMARK 465 SER A 134 REMARK 465 TRP A 135 REMARK 465 ALA A 136 REMARK 465 SER A 137 REMARK 465 GLY A 138 REMARK 465 LYS A 139 REMARK 465 GLY A 366 REMARK 465 GLU A 367 REMARK 465 GLY A 368 REMARK 465 GLU A 369 REMARK 465 CYS A 370 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 127 OG1 CG2 REMARK 470 VAL A 297 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 125 O HOH A 456 1.45 REMARK 500 CG GLN A 329 O HOH A 454 1.99 REMARK 500 NE2 GLN A 329 O HOH A 454 2.05 REMARK 500 O HOH A 445 O HOH A 452 2.09 REMARK 500 C LEU A 337 O ALA A 342 2.10 REMARK 500 O LEU A 337 O ALA A 342 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 451 O HOH A 452 7555 1.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 337 CA - CB - CG ANGL. DEV. = -14.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 32 -21.60 97.21 REMARK 500 ALA A 227 33.58 -77.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 403 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 56 O REMARK 620 2 GLU A 121 OE2 104.2 REMARK 620 3 HOH A 380 O 127.9 111.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 402 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 184 OG REMARK 620 2 LEU A 302 O 109.7 REMARK 620 3 LEU A 304 O 112.6 106.5 REMARK 620 4 HOH A 379 O 109.8 120.8 96.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LMR A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 371 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC100293 RELATED DB: TARGETDB DBREF 3RAC A 1 370 UNP C8WUX4 C8WUX4_ALIAD 1 370 SEQADV 3RAC SER A -2 UNP C8WUX4 EXPRESSION TAG SEQADV 3RAC ASN A -1 UNP C8WUX4 EXPRESSION TAG SEQADV 3RAC ALA A 0 UNP C8WUX4 EXPRESSION TAG SEQRES 1 A 373 SER ASN ALA MET ASN GLY THR ARG SER ALA TRP GLY ALA SEQRES 2 A 373 ARG ALA TRP GLU ALA VAL ARG GLY PHE ALA ASP ARG PRO SEQRES 3 A 373 PRO GLY MET GLN ASP GLY TYR PRO ASP PHE ALA LYS ARG SEQRES 4 A 373 ARG ARG ALA VAL GLU THR ARG LEU LEU SER PHE VAL GLU SEQRES 5 A 373 ASP ALA GLY TYR GLU PRO VAL THR SER GLY LEU PHE GLU SEQRES 6 A 373 TYR VAL ASP THR LEU LEU ARG ALA ARG SER PRO GLU SER SEQRES 7 A 373 SER ARG ASP TRP ILE ARG LEU PHE ASP GLY GLY GLY ASP SEQRES 8 A 373 ALA VAL ALA LEU ARG PRO GLU MET THR PRO SER ILE ALA SEQRES 9 A 373 ARG MET ALA ALA PRO ARG VAL ALA ALA GLY ARG THR PRO SEQRES 10 A 373 ILE ARG TRP CYS TYR CYS GLU ARG VAL TYR ARG ARG THR SEQRES 11 A 373 ASP ASP PRO ALA SER LEU SER TRP ALA SER GLY LYS ALA SEQRES 12 A 373 ALA GLU SER THR GLN VAL GLY ILE GLU ARG ILE GLY GLU SEQRES 13 A 373 GLU ALA SER VAL ASP VAL ASP MET ASP VAL LEU ARG LEU SEQRES 14 A 373 LEU HIS GLU ALA SER ALA ALA ALA GLY VAL ARG HIS HIS SEQRES 15 A 373 ARG ILE VAL VAL SER HIS ALA ARG LEU VAL PRO ARG LEU SEQRES 16 A 373 LEU ASP ALA LEU GLY ILE SER ALA SER LEU SER ARG ALA SEQRES 17 A 373 PHE LEU ALA CYS LEU THR SER GLY ASN TYR VAL GLN PHE SEQRES 18 A 373 ARG GLU LEU TRP GLN LEU HIS ALA ALA LYS ASP VAL ASP SEQRES 19 A 373 LEU LEU ALA ASN LEU LEU THR TRP SER PRO ALA GLU ARG SEQRES 20 A 373 ASP ALA ALA LYS ARG SER ARG GLU ALA SER ASP ARG GLU SEQRES 21 A 373 LEU GLU ALA LEU LEU ARG ASP ALA VAL ASP PRO ARG ALA SEQRES 22 A 373 ALA ALA ASP VAL ARG ASP ALA TRP ARG TYR LEU CYS ARG SEQRES 23 A 373 LEU ALA GLU ALA LEU HIS ASP SER GLY LEU ALA SER ASP SEQRES 24 A 373 VAL VAL THR PHE ASP LEU ALA LEU HIS ARG GLU LEU ASP SEQRES 25 A 373 TYR TYR THR GLY LEU VAL PHE GLU MET PHE ALA PRO GLY SEQRES 26 A 373 VAL GLY ALA PRO ILE ALA GLN GLY GLY ARG TYR ASP GLU SEQRES 27 A 373 LEU LEU ALA GLN PHE GLY ALA GLY ALA PRO ALA VAL GLY SEQRES 28 A 373 PHE ALA PHE GLU VAL GLU ARG VAL MET ALA VAL LEU GLU SEQRES 29 A 373 ALA GLN GLU GLU GLY GLU GLY GLU CYS HET LMR A 401 9 HET NA A 402 1 HET NA A 403 1 HET ACY A 406 4 HET ACY A 407 4 HET GOL A 371 6 HETNAM LMR (2S)-2-HYDROXYBUTANEDIOIC ACID HETNAM NA SODIUM ION HETNAM ACY ACETIC ACID HETNAM GOL GLYCEROL HETSYN LMR L-MALATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 LMR C4 H6 O5 FORMUL 3 NA 2(NA 1+) FORMUL 5 ACY 2(C2 H4 O2) FORMUL 7 GOL C3 H8 O3 FORMUL 8 HOH *90(H2 O) HELIX 1 1 ASP A 32 ALA A 51 1 20 HELIX 2 2 VAL A 64 ARG A 69 1 6 HELIX 3 3 MET A 96 ALA A 110 1 15 HELIX 4 4 SER A 156 GLY A 175 1 20 HELIX 5 5 ARG A 187 LEU A 196 1 10 HELIX 6 6 SER A 199 GLY A 213 1 15 HELIX 7 7 ASN A 214 ALA A 226 1 13 HELIX 8 8 ASP A 231 TRP A 239 1 9 HELIX 9 9 SER A 250 ARG A 263 1 14 HELIX 10 10 ASP A 267 GLY A 292 1 26 HELIX 11 11 LEU A 337 GLY A 341 5 5 HELIX 12 12 VAL A 353 GLU A 365 1 13 SHEET 1 A 8 GLU A 54 PRO A 55 0 SHEET 2 A 8 ARG A 116 ARG A 125 1 O ARG A 116 N GLU A 54 SHEET 3 A 8 ALA A 141 ARG A 150 -1 O SER A 143 N VAL A 123 SHEET 4 A 8 VAL A 347 GLU A 352 -1 O VAL A 347 N ARG A 150 SHEET 5 A 8 ALA A 328 ARG A 332 -1 N GLN A 329 O ALA A 350 SHEET 6 A 8 LEU A 314 PHE A 319 -1 N MET A 318 O ALA A 328 SHEET 7 A 8 ARG A 180 HIS A 185 -1 N VAL A 182 O GLU A 317 SHEET 8 A 8 VAL A 298 PHE A 300 1 O THR A 299 N ILE A 181 SHEET 1 B 2 PHE A 61 TYR A 63 0 SHEET 2 B 2 VAL A 90 LEU A 92 -1 O ALA A 91 N GLU A 62 LINK O VAL A 56 NA NA A 403 1555 1555 3.00 LINK OE2 GLU A 121 NA NA A 403 1555 1555 2.83 LINK OG SER A 184 NA NA A 402 1555 1555 2.80 LINK O LEU A 302 NA NA A 402 1555 1555 3.02 LINK O LEU A 304 NA NA A 402 1555 1555 2.72 LINK O HOH A 379 NA NA A 402 1555 1555 2.90 LINK O HOH A 380 NA NA A 403 1555 1555 2.81 CISPEP 1 THR A 113 PRO A 114 0 3.42 SITE 1 AC1 14 GLU A 95 THR A 97 TYR A 119 GLN A 145 SITE 2 AC1 14 GLU A 149 TYR A 310 TYR A 311 GLN A 329 SITE 3 AC1 14 GLY A 330 TYR A 333 GLY A 348 PHE A 349 SITE 4 AC1 14 HOH A 450 HOH A 454 SITE 1 AC2 5 SER A 184 VAL A 189 LEU A 302 LEU A 304 SITE 2 AC2 5 HOH A 379 SITE 1 AC3 5 VAL A 56 TYR A 119 CYS A 120 GLU A 121 SITE 2 AC3 5 HOH A 380 SITE 1 AC4 1 HOH A 445 SITE 1 AC5 4 ARG A 69 ALA A 70 ARG A 71 ASP A 309 SITE 1 AC6 4 GLN A 27 ARG A 37 GLU A 142 HOH A 459 CRYST1 69.276 69.276 177.643 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014435 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014435 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005629 0.00000