data_3RAV # _entry.id 3RAV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3RAV pdb_00003rav 10.2210/pdb3rav/pdb RCSB RCSB064703 ? ? WWPDB D_1000064703 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-05-11 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2019-12-11 4 'Structure model' 1 3 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_PDB_caveat 2 3 'Structure model' pdbx_struct_assembly 3 3 'Structure model' pdbx_struct_assembly_gen 4 3 'Structure model' pdbx_struct_assembly_prop 5 3 'Structure model' pdbx_struct_oper_list 6 3 'Structure model' pdbx_struct_special_symmetry 7 4 'Structure model' chem_comp_atom 8 4 'Structure model' chem_comp_bond 9 4 'Structure model' database_2 10 4 'Structure model' pdbx_struct_conn_angle 11 4 'Structure model' struct_conn 12 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_struct_oper_list.matrix[1][1]' 2 3 'Structure model' '_pdbx_struct_oper_list.matrix[1][2]' 3 3 'Structure model' '_pdbx_struct_oper_list.matrix[1][3]' 4 3 'Structure model' '_pdbx_struct_oper_list.matrix[2][1]' 5 3 'Structure model' '_pdbx_struct_oper_list.matrix[2][2]' 6 3 'Structure model' '_pdbx_struct_oper_list.matrix[2][3]' 7 3 'Structure model' '_pdbx_struct_oper_list.matrix[3][1]' 8 3 'Structure model' '_pdbx_struct_oper_list.matrix[3][2]' 9 3 'Structure model' '_pdbx_struct_oper_list.matrix[3][3]' 10 3 'Structure model' '_pdbx_struct_oper_list.name' 11 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 12 4 'Structure model' '_database_2.pdbx_DOI' 13 4 'Structure model' '_database_2.pdbx_database_accession' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 24 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 25 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 26 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 27 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 28 4 'Structure model' '_pdbx_struct_conn_angle.value' 29 4 'Structure model' '_struct_conn.pdbx_dist_value' 30 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 31 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 32 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 33 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 34 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 35 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 36 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 37 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 38 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 39 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 40 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 41 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 42 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 43 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _database_PDB_caveat.id 1 _database_PDB_caveat.text 'RAV A 183 HAS WRONG CHIRALITY AT ATOM C13' # _pdbx_database_status.entry_id 3RAV _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-03-28 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3F32 . unspecified PDB 3F33 . unspecified PDB 3F34 . unspecified PDB 3F35 . unspecified PDB 3F36 . unspecified PDB 3F37 . unspecified PDB 3F38 . unspecified PDB 3F39 . unspecified PDB 3RD0 . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Oakley, S.H.' 1 'Vedula, L.S.' 2 'Xi, J.' 3 'Liu, R.' 4 'Eckenhoff, R.G.' 5 'Loll, P.J.' 6 # _citation.id primary _citation.title 'High resolution view of barbiturate recognition by a protein binding site' _citation.journal_abbrev 'to be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Oakley, S.H.' 1 ? primary 'Vedula, L.S.' 2 ? primary 'Xi, J.' 3 ? primary 'Liu, R.' 4 ? primary 'Eckenhoff, R.G.' 5 ? primary 'Loll, P.J.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Ferritin light chain' 19872.428 1 ? ? ? ? 2 non-polymer syn 'CADMIUM ION' 112.411 6 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 4 non-polymer syn '5-ethyl-5-[(2S)-pentan-2-yl]pyrimidine-2,4,6(1H,3H,5H)-trione' 226.272 1 ? ? ? ? 5 water nat water 18.015 196 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Ferritin L subunit' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SSQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGAERLLKMQNQRGGRALFQD LQKPSQDEWGTTLDAMKAAIVLEKSLNQALLDLHALGSAQADPHLCDFLESHFLDEEVKLIKKMGDHLTNIQRLVGSQAG LGEYLFERLTLKHD ; _entity_poly.pdbx_seq_one_letter_code_can ;SSQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGAERLLKMQNQRGGRALFQD LQKPSQDEWGTTLDAMKAAIVLEKSLNQALLDLHALGSAQADPHLCDFLESHFLDEEVKLIKKMGDHLTNIQRLVGSQAG LGEYLFERLTLKHD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CADMIUM ION' CD 3 'SULFATE ION' SO4 4 '5-ethyl-5-[(2S)-pentan-2-yl]pyrimidine-2,4,6(1H,3H,5H)-trione' RAV 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 SER n 1 3 GLN n 1 4 ILE n 1 5 ARG n 1 6 GLN n 1 7 ASN n 1 8 TYR n 1 9 SER n 1 10 THR n 1 11 GLU n 1 12 VAL n 1 13 GLU n 1 14 ALA n 1 15 ALA n 1 16 VAL n 1 17 ASN n 1 18 ARG n 1 19 LEU n 1 20 VAL n 1 21 ASN n 1 22 LEU n 1 23 TYR n 1 24 LEU n 1 25 ARG n 1 26 ALA n 1 27 SER n 1 28 TYR n 1 29 THR n 1 30 TYR n 1 31 LEU n 1 32 SER n 1 33 LEU n 1 34 GLY n 1 35 PHE n 1 36 TYR n 1 37 PHE n 1 38 ASP n 1 39 ARG n 1 40 ASP n 1 41 ASP n 1 42 VAL n 1 43 ALA n 1 44 LEU n 1 45 GLU n 1 46 GLY n 1 47 VAL n 1 48 CYS n 1 49 HIS n 1 50 PHE n 1 51 PHE n 1 52 ARG n 1 53 GLU n 1 54 LEU n 1 55 ALA n 1 56 GLU n 1 57 GLU n 1 58 LYS n 1 59 ARG n 1 60 GLU n 1 61 GLY n 1 62 ALA n 1 63 GLU n 1 64 ARG n 1 65 LEU n 1 66 LEU n 1 67 LYS n 1 68 MET n 1 69 GLN n 1 70 ASN n 1 71 GLN n 1 72 ARG n 1 73 GLY n 1 74 GLY n 1 75 ARG n 1 76 ALA n 1 77 LEU n 1 78 PHE n 1 79 GLN n 1 80 ASP n 1 81 LEU n 1 82 GLN n 1 83 LYS n 1 84 PRO n 1 85 SER n 1 86 GLN n 1 87 ASP n 1 88 GLU n 1 89 TRP n 1 90 GLY n 1 91 THR n 1 92 THR n 1 93 LEU n 1 94 ASP n 1 95 ALA n 1 96 MET n 1 97 LYS n 1 98 ALA n 1 99 ALA n 1 100 ILE n 1 101 VAL n 1 102 LEU n 1 103 GLU n 1 104 LYS n 1 105 SER n 1 106 LEU n 1 107 ASN n 1 108 GLN n 1 109 ALA n 1 110 LEU n 1 111 LEU n 1 112 ASP n 1 113 LEU n 1 114 HIS n 1 115 ALA n 1 116 LEU n 1 117 GLY n 1 118 SER n 1 119 ALA n 1 120 GLN n 1 121 ALA n 1 122 ASP n 1 123 PRO n 1 124 HIS n 1 125 LEU n 1 126 CYS n 1 127 ASP n 1 128 PHE n 1 129 LEU n 1 130 GLU n 1 131 SER n 1 132 HIS n 1 133 PHE n 1 134 LEU n 1 135 ASP n 1 136 GLU n 1 137 GLU n 1 138 VAL n 1 139 LYS n 1 140 LEU n 1 141 ILE n 1 142 LYS n 1 143 LYS n 1 144 MET n 1 145 GLY n 1 146 ASP n 1 147 HIS n 1 148 LEU n 1 149 THR n 1 150 ASN n 1 151 ILE n 1 152 GLN n 1 153 ARG n 1 154 LEU n 1 155 VAL n 1 156 GLY n 1 157 SER n 1 158 GLN n 1 159 ALA n 1 160 GLY n 1 161 LEU n 1 162 GLY n 1 163 GLU n 1 164 TYR n 1 165 LEU n 1 166 PHE n 1 167 GLU n 1 168 ARG n 1 169 LEU n 1 170 THR n 1 171 LEU n 1 172 LYS n 1 173 HIS n 1 174 ASP n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name 'Domestic horse' _entity_src_nat.pdbx_organism_scientific 'Equus caballus' _entity_src_nat.pdbx_ncbi_taxonomy_id 9796 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ Spleen _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CD non-polymer . 'CADMIUM ION' ? 'Cd 2' 112.411 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 RAV non-polymer . '5-ethyl-5-[(2S)-pentan-2-yl]pyrimidine-2,4,6(1H,3H,5H)-trione' Pentobarbital 'C11 H18 N2 O3' 226.272 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 ? ? ? A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 ILE 4 4 4 ILE ILE A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 GLN 6 6 6 GLN GLN A . n A 1 7 ASN 7 7 7 ASN ASN A . n A 1 8 TYR 8 8 8 TYR TYR A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 ASN 17 17 17 ASN ASN A . n A 1 18 ARG 18 18 18 ARG ARG A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 ASN 21 21 21 ASN ASN A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 TYR 23 23 23 TYR TYR A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 TYR 28 28 28 TYR TYR A . n A 1 29 THR 29 29 29 THR THR A . n A 1 30 TYR 30 30 30 TYR TYR A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 PHE 35 35 35 PHE PHE A . n A 1 36 TYR 36 36 36 TYR TYR A . n A 1 37 PHE 37 37 37 PHE PHE A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 ASP 41 41 41 ASP ASP A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 CYS 48 48 48 CYS CYS A . n A 1 49 HIS 49 49 49 HIS HIS A . n A 1 50 PHE 50 50 50 PHE PHE A . n A 1 51 PHE 51 51 51 PHE PHE A . n A 1 52 ARG 52 52 52 ARG ARG A . n A 1 53 GLU 53 53 53 GLU GLU A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 GLU 56 56 56 GLU GLU A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 ARG 59 59 59 ARG ARG A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 ARG 64 64 64 ARG ARG A . n A 1 65 LEU 65 65 65 LEU LEU A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 LYS 67 67 67 LYS LYS A . n A 1 68 MET 68 68 68 MET MET A . n A 1 69 GLN 69 69 69 GLN GLN A . n A 1 70 ASN 70 70 70 ASN ASN A . n A 1 71 GLN 71 71 71 GLN GLN A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 PHE 78 78 78 PHE PHE A . n A 1 79 GLN 79 79 79 GLN GLN A . n A 1 80 ASP 80 80 80 ASP ASP A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 GLN 82 82 82 GLN GLN A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 PRO 84 84 84 PRO PRO A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 GLN 86 86 86 GLN GLN A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 GLU 88 88 88 GLU GLU A . n A 1 89 TRP 89 89 89 TRP TRP A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 THR 92 92 92 THR THR A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 ASP 94 94 94 ASP ASP A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 MET 96 96 96 MET MET A . n A 1 97 LYS 97 97 97 LYS LYS A . n A 1 98 ALA 98 98 98 ALA ALA A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 ILE 100 100 100 ILE ILE A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 GLU 103 103 103 GLU GLU A . n A 1 104 LYS 104 104 104 LYS LYS A . n A 1 105 SER 105 105 105 SER SER A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 ASN 107 107 107 ASN ASN A . n A 1 108 GLN 108 108 108 GLN GLN A . n A 1 109 ALA 109 109 109 ALA ALA A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 ASP 112 112 112 ASP ASP A . n A 1 113 LEU 113 113 113 LEU LEU A . n A 1 114 HIS 114 114 114 HIS HIS A . n A 1 115 ALA 115 115 115 ALA ALA A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 ALA 119 119 119 ALA ALA A . n A 1 120 GLN 120 120 120 GLN GLN A . n A 1 121 ALA 121 121 121 ALA ALA A . n A 1 122 ASP 122 122 122 ASP ASP A . n A 1 123 PRO 123 123 123 PRO PRO A . n A 1 124 HIS 124 124 124 HIS HIS A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 CYS 126 126 126 CYS CYS A . n A 1 127 ASP 127 127 127 ASP ASP A . n A 1 128 PHE 128 128 128 PHE PHE A . n A 1 129 LEU 129 129 129 LEU LEU A . n A 1 130 GLU 130 130 130 GLU GLU A . n A 1 131 SER 131 131 131 SER SER A . n A 1 132 HIS 132 132 132 HIS HIS A . n A 1 133 PHE 133 133 133 PHE PHE A . n A 1 134 LEU 134 134 134 LEU LEU A . n A 1 135 ASP 135 135 135 ASP ASP A . n A 1 136 GLU 136 136 136 GLU GLU A . n A 1 137 GLU 137 137 137 GLU GLU A . n A 1 138 VAL 138 138 138 VAL VAL A . n A 1 139 LYS 139 139 139 LYS LYS A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 ILE 141 141 141 ILE ILE A . n A 1 142 LYS 142 142 142 LYS LYS A . n A 1 143 LYS 143 143 143 LYS LYS A . n A 1 144 MET 144 144 144 MET MET A . n A 1 145 GLY 145 145 145 GLY GLY A . n A 1 146 ASP 146 146 146 ASP ASP A . n A 1 147 HIS 147 147 147 HIS HIS A . n A 1 148 LEU 148 148 148 LEU LEU A . n A 1 149 THR 149 149 149 THR THR A . n A 1 150 ASN 150 150 150 ASN ASN A . n A 1 151 ILE 151 151 151 ILE ILE A . n A 1 152 GLN 152 152 152 GLN GLN A . n A 1 153 ARG 153 153 153 ARG ARG A . n A 1 154 LEU 154 154 154 LEU LEU A . n A 1 155 VAL 155 155 155 VAL VAL A . n A 1 156 GLY 156 156 ? ? ? A . n A 1 157 SER 157 157 ? ? ? A . n A 1 158 GLN 158 158 158 GLN GLN A . n A 1 159 ALA 159 159 159 ALA ALA A . n A 1 160 GLY 160 160 160 GLY GLY A . n A 1 161 LEU 161 161 161 LEU LEU A . n A 1 162 GLY 162 162 162 GLY GLY A . n A 1 163 GLU 163 163 163 GLU GLU A . n A 1 164 TYR 164 164 164 TYR TYR A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 PHE 166 166 166 PHE PHE A . n A 1 167 GLU 167 167 167 GLU GLU A . n A 1 168 ARG 168 168 168 ARG ARG A . n A 1 169 LEU 169 169 169 LEU LEU A . n A 1 170 THR 170 170 170 THR THR A . n A 1 171 LEU 171 171 171 LEU LEU A . n A 1 172 LYS 172 172 ? ? ? A . n A 1 173 HIS 173 173 ? ? ? A . n A 1 174 ASP 174 174 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CD 1 175 1 CD CD A . C 2 CD 1 176 2 CD CD A . D 2 CD 1 177 3 CD CD A . E 2 CD 1 178 4 CD CD A . F 2 CD 1 179 5 CD CD A . G 3 SO4 1 180 1 SO4 SO4 A . H 3 SO4 1 181 1 SO4 SO4 A . I 2 CD 1 182 1 CD CD A . J 4 RAV 1 183 1 RAV RAV A . K 5 HOH 1 184 184 HOH HOH A . K 5 HOH 2 185 185 HOH HOH A . K 5 HOH 3 186 186 HOH HOH A . K 5 HOH 4 187 187 HOH HOH A . K 5 HOH 5 188 188 HOH HOH A . K 5 HOH 6 189 189 HOH HOH A . K 5 HOH 7 190 190 HOH HOH A . K 5 HOH 8 191 1 HOH HOH A . K 5 HOH 9 192 192 HOH HOH A . K 5 HOH 10 193 2 HOH HOH A . K 5 HOH 11 194 194 HOH HOH A . K 5 HOH 12 195 195 HOH HOH A . K 5 HOH 13 196 196 HOH HOH A . K 5 HOH 14 197 197 HOH HOH A . K 5 HOH 15 198 198 HOH HOH A . K 5 HOH 16 199 199 HOH HOH A . K 5 HOH 17 200 200 HOH HOH A . K 5 HOH 18 201 3 HOH HOH A . K 5 HOH 19 202 4 HOH HOH A . K 5 HOH 20 203 5 HOH HOH A . K 5 HOH 21 204 6 HOH HOH A . K 5 HOH 22 205 7 HOH HOH A . K 5 HOH 23 206 8 HOH HOH A . K 5 HOH 24 207 9 HOH HOH A . K 5 HOH 25 208 10 HOH HOH A . K 5 HOH 26 209 11 HOH HOH A . K 5 HOH 27 210 12 HOH HOH A . K 5 HOH 28 211 13 HOH HOH A . K 5 HOH 29 212 14 HOH HOH A . K 5 HOH 30 213 15 HOH HOH A . K 5 HOH 31 214 16 HOH HOH A . K 5 HOH 32 215 17 HOH HOH A . K 5 HOH 33 216 18 HOH HOH A . K 5 HOH 34 217 19 HOH HOH A . K 5 HOH 35 218 20 HOH HOH A . K 5 HOH 36 219 21 HOH HOH A . K 5 HOH 37 220 22 HOH HOH A . K 5 HOH 38 221 23 HOH HOH A . K 5 HOH 39 222 24 HOH HOH A . K 5 HOH 40 223 25 HOH HOH A . K 5 HOH 41 224 26 HOH HOH A . K 5 HOH 42 225 27 HOH HOH A . K 5 HOH 43 226 28 HOH HOH A . K 5 HOH 44 227 29 HOH HOH A . K 5 HOH 45 228 30 HOH HOH A . K 5 HOH 46 229 31 HOH HOH A . K 5 HOH 47 230 32 HOH HOH A . K 5 HOH 48 231 33 HOH HOH A . K 5 HOH 49 232 34 HOH HOH A . K 5 HOH 50 233 35 HOH HOH A . K 5 HOH 51 234 36 HOH HOH A . K 5 HOH 52 235 37 HOH HOH A . K 5 HOH 53 236 38 HOH HOH A . K 5 HOH 54 237 39 HOH HOH A . K 5 HOH 55 238 40 HOH HOH A . K 5 HOH 56 239 41 HOH HOH A . K 5 HOH 57 240 42 HOH HOH A . K 5 HOH 58 241 43 HOH HOH A . K 5 HOH 59 242 44 HOH HOH A . K 5 HOH 60 243 45 HOH HOH A . K 5 HOH 61 244 47 HOH HOH A . K 5 HOH 62 245 48 HOH HOH A . K 5 HOH 63 246 49 HOH HOH A . K 5 HOH 64 247 50 HOH HOH A . K 5 HOH 65 248 51 HOH HOH A . K 5 HOH 66 249 52 HOH HOH A . K 5 HOH 67 250 53 HOH HOH A . K 5 HOH 68 251 54 HOH HOH A . K 5 HOH 69 252 55 HOH HOH A . K 5 HOH 70 253 56 HOH HOH A . K 5 HOH 71 254 57 HOH HOH A . K 5 HOH 72 255 58 HOH HOH A . K 5 HOH 73 256 59 HOH HOH A . K 5 HOH 74 257 60 HOH HOH A . K 5 HOH 75 258 61 HOH HOH A . K 5 HOH 76 259 62 HOH HOH A . K 5 HOH 77 260 63 HOH HOH A . K 5 HOH 78 261 64 HOH HOH A . K 5 HOH 79 262 65 HOH HOH A . K 5 HOH 80 263 66 HOH HOH A . K 5 HOH 81 264 67 HOH HOH A . K 5 HOH 82 265 68 HOH HOH A . K 5 HOH 83 266 69 HOH HOH A . K 5 HOH 84 267 70 HOH HOH A . K 5 HOH 85 268 71 HOH HOH A . K 5 HOH 86 269 72 HOH HOH A . K 5 HOH 87 270 73 HOH HOH A . K 5 HOH 88 271 74 HOH HOH A . K 5 HOH 89 272 75 HOH HOH A . K 5 HOH 90 273 76 HOH HOH A . K 5 HOH 91 274 77 HOH HOH A . K 5 HOH 92 275 78 HOH HOH A . K 5 HOH 93 276 79 HOH HOH A . K 5 HOH 94 277 80 HOH HOH A . K 5 HOH 95 278 81 HOH HOH A . K 5 HOH 96 279 82 HOH HOH A . K 5 HOH 97 280 83 HOH HOH A . K 5 HOH 98 281 84 HOH HOH A . K 5 HOH 99 282 85 HOH HOH A . K 5 HOH 100 283 86 HOH HOH A . K 5 HOH 101 284 87 HOH HOH A . K 5 HOH 102 285 88 HOH HOH A . K 5 HOH 103 286 89 HOH HOH A . K 5 HOH 104 287 90 HOH HOH A . K 5 HOH 105 288 91 HOH HOH A . K 5 HOH 106 289 92 HOH HOH A . K 5 HOH 107 290 93 HOH HOH A . K 5 HOH 108 291 94 HOH HOH A . K 5 HOH 109 292 95 HOH HOH A . K 5 HOH 110 293 96 HOH HOH A . K 5 HOH 111 294 97 HOH HOH A . K 5 HOH 112 295 98 HOH HOH A . K 5 HOH 113 296 99 HOH HOH A . K 5 HOH 114 297 100 HOH HOH A . K 5 HOH 115 298 101 HOH HOH A . K 5 HOH 116 299 102 HOH HOH A . K 5 HOH 117 300 103 HOH HOH A . K 5 HOH 118 301 104 HOH HOH A . K 5 HOH 119 302 105 HOH HOH A . K 5 HOH 120 303 106 HOH HOH A . K 5 HOH 121 304 107 HOH HOH A . K 5 HOH 122 305 108 HOH HOH A . K 5 HOH 123 306 109 HOH HOH A . K 5 HOH 124 307 110 HOH HOH A . K 5 HOH 125 308 111 HOH HOH A . K 5 HOH 126 309 112 HOH HOH A . K 5 HOH 127 310 113 HOH HOH A . K 5 HOH 128 311 114 HOH HOH A . K 5 HOH 129 312 115 HOH HOH A . K 5 HOH 130 313 116 HOH HOH A . K 5 HOH 131 314 117 HOH HOH A . K 5 HOH 132 315 118 HOH HOH A . K 5 HOH 133 316 119 HOH HOH A . K 5 HOH 134 317 120 HOH HOH A . K 5 HOH 135 318 121 HOH HOH A . K 5 HOH 136 319 122 HOH HOH A . K 5 HOH 137 320 123 HOH HOH A . K 5 HOH 138 321 124 HOH HOH A . K 5 HOH 139 322 125 HOH HOH A . K 5 HOH 140 323 126 HOH HOH A . K 5 HOH 141 324 127 HOH HOH A . K 5 HOH 142 325 129 HOH HOH A . K 5 HOH 143 326 130 HOH HOH A . K 5 HOH 144 327 131 HOH HOH A . K 5 HOH 145 328 132 HOH HOH A . K 5 HOH 146 329 133 HOH HOH A . K 5 HOH 147 330 134 HOH HOH A . K 5 HOH 148 331 135 HOH HOH A . K 5 HOH 149 332 136 HOH HOH A . K 5 HOH 150 333 137 HOH HOH A . K 5 HOH 151 334 138 HOH HOH A . K 5 HOH 152 335 139 HOH HOH A . K 5 HOH 153 336 140 HOH HOH A . K 5 HOH 154 337 141 HOH HOH A . K 5 HOH 155 338 142 HOH HOH A . K 5 HOH 156 339 143 HOH HOH A . K 5 HOH 157 340 144 HOH HOH A . K 5 HOH 158 341 145 HOH HOH A . K 5 HOH 159 342 146 HOH HOH A . K 5 HOH 160 343 147 HOH HOH A . K 5 HOH 161 344 148 HOH HOH A . K 5 HOH 162 345 149 HOH HOH A . K 5 HOH 163 346 150 HOH HOH A . K 5 HOH 164 347 151 HOH HOH A . K 5 HOH 165 348 152 HOH HOH A . K 5 HOH 166 349 153 HOH HOH A . K 5 HOH 167 350 154 HOH HOH A . K 5 HOH 168 351 155 HOH HOH A . K 5 HOH 169 352 156 HOH HOH A . K 5 HOH 170 353 157 HOH HOH A . K 5 HOH 171 354 158 HOH HOH A . K 5 HOH 172 355 159 HOH HOH A . K 5 HOH 173 356 160 HOH HOH A . K 5 HOH 174 357 161 HOH HOH A . K 5 HOH 175 358 162 HOH HOH A . K 5 HOH 176 359 163 HOH HOH A . K 5 HOH 177 360 164 HOH HOH A . K 5 HOH 178 361 165 HOH HOH A . K 5 HOH 179 362 166 HOH HOH A . K 5 HOH 180 363 167 HOH HOH A . K 5 HOH 181 364 168 HOH HOH A . K 5 HOH 182 365 169 HOH HOH A . K 5 HOH 183 366 170 HOH HOH A . K 5 HOH 184 367 171 HOH HOH A . K 5 HOH 185 368 172 HOH HOH A . K 5 HOH 186 369 173 HOH HOH A . K 5 HOH 187 370 174 HOH HOH A . K 5 HOH 188 371 175 HOH HOH A . K 5 HOH 189 372 176 HOH HOH A . K 5 HOH 190 373 177 HOH HOH A . K 5 HOH 191 374 178 HOH HOH A . K 5 HOH 192 375 179 HOH HOH A . K 5 HOH 193 376 180 HOH HOH A . K 5 HOH 194 377 181 HOH HOH A . K 5 HOH 195 378 182 HOH HOH A . K 5 HOH 196 379 183 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 136 ? CG ? A GLU 136 CG 2 1 Y 1 A GLU 136 ? CD ? A GLU 136 CD 3 1 Y 1 A GLU 136 ? OE1 ? A GLU 136 OE1 4 1 Y 1 A GLU 136 ? OE2 ? A GLU 136 OE2 5 1 Y 1 A GLN 158 ? CG ? A GLN 158 CG 6 1 Y 1 A GLN 158 ? CD ? A GLN 158 CD 7 1 Y 1 A GLN 158 ? OE1 ? A GLN 158 OE1 8 1 Y 1 A GLN 158 ? NE2 ? A GLN 158 NE2 # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 d*TREK . ? package 'Jim W. Pflugrath' Jim.Pflugrath@Rigaku.com 'data scaling' http://www.rigaku.com/software/dtrek.html ? ? 2 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 PHENIX . ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 CrystalClear . ? ? ? ? 'data collection' ? ? ? 6 CrystalClear . ? ? ? ? 'data reduction' ? ? ? 7 CrystalClear . ? ? ? ? 'data scaling' ? ? ? # _cell.length_a 182.480 _cell.length_b 182.480 _cell.length_c 182.480 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3RAV _cell.pdbx_unique_axis ? _cell.Z_PDB 96 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'F 4 3 2' _symmetry.entry_id 3RAV _symmetry.Int_Tables_number 209 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3RAV _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 62.3 _exptl_crystal.density_Matthews 3.3 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7 _exptl_crystal_grow.temp 291 _exptl_crystal_grow.pdbx_details ;0.2-1.6 M (NH4)2SO4 and 0.1-0.275 M CdSO4, 0.5 mM thiopental were mixed with equal volumes of apoferritin solution and equilibrated over 0.7-1 mL, VAPOR DIFFUSION, HANGING DROP, temperature 291K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9774 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X6A' _diffrn_source.pdbx_wavelength_list 0.9774 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X6A # _reflns.entry_id 3RAV _reflns.B_iso_Wilson_estimate 21.630 _reflns.observed_criterion_sigma_F 38.9 _reflns.observed_criterion_sigma_I 7.8 _reflns.d_resolution_high 1.9 _reflns.d_resolution_low 45.62 _reflns.number_all 21095 _reflns.number_obs 21095 _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs 0.109 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 20.0 _reflns.pdbx_redundancy 34.09 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.97 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.527 _reflns_shell.meanI_over_sigI_obs 7.8 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 34.09 _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3RAV _refine.ls_d_res_high 1.900 _refine.ls_d_res_low 45.620 _refine.pdbx_ls_sigma_F 0.84 _refine.ls_percent_reflns_obs 99.900 _refine.ls_number_reflns_obs 21072 _refine.ls_R_factor_obs 0.176 _refine.ls_R_factor_R_work 0.174 _refine.ls_R_factor_R_free 0.208 _refine.ls_percent_reflns_R_free 5.150 _refine.ls_number_reflns_R_free 1994 _refine.B_iso_mean 22.472 _refine.solvent_model_param_bsol 42.874 _refine.solvent_model_param_ksol 0.400 _refine.aniso_B[1][1] 0.000 _refine.aniso_B[2][2] 0.000 _refine.aniso_B[3][3] -0.000 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] -0.000 _refine.overall_SU_ML 0.200 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.300 _refine.pdbx_solvent_shrinkage_radii 1.060 _refine.pdbx_method_to_determine_struct 'MR, MR' _refine.pdbx_stereochemistry_target_values ML _refine.B_iso_max 75.75 _refine.B_iso_min 11.86 _refine.occupancy_max 1.00 _refine.occupancy_min 0.22 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 21101 _refine.ls_R_factor_all 0.176 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_isotropic_thermal_model ? _refine.details ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_ion_probe_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1346 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.number_atoms_solvent 196 _refine_hist.number_atoms_total 1574 _refine_hist.d_res_high 1.900 _refine_hist.d_res_low 45.620 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 1461 0.007 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 1981 0.959 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 218 0.065 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 253 0.003 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 555 15.726 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 1.900 1.947 14 99.000 2605 . 0.233 0.262 . 116 . 2721 . . 'X-RAY DIFFRACTION' 1.947 2.000 14 100.000 2602 . 0.206 0.245 . 169 . 2771 . . 'X-RAY DIFFRACTION' 2.000 2.059 14 100.000 2608 . 0.186 0.226 . 158 . 2766 . . 'X-RAY DIFFRACTION' 2.059 2.125 14 100.000 2657 . 0.176 0.182 . 127 . 2784 . . 'X-RAY DIFFRACTION' 2.125 2.201 14 100.000 2588 . 0.162 0.227 . 154 . 2742 . . 'X-RAY DIFFRACTION' 2.201 2.290 14 100.000 2597 . 0.166 0.201 . 168 . 2765 . . 'X-RAY DIFFRACTION' 2.290 2.394 14 100.000 2608 . 0.170 0.207 . 153 . 2761 . . 'X-RAY DIFFRACTION' 2.394 2.520 14 100.000 2615 . 0.166 0.248 . 125 . 2740 . . 'X-RAY DIFFRACTION' 2.520 2.678 14 100.000 2633 . 0.162 0.174 . 157 . 2790 . . 'X-RAY DIFFRACTION' 2.678 2.885 14 100.000 2625 . 0.159 0.201 . 144 . 2769 . . 'X-RAY DIFFRACTION' 2.885 3.175 14 100.000 2601 . 0.161 0.236 . 147 . 2748 . . 'X-RAY DIFFRACTION' 3.175 3.634 14 100.000 2654 . 0.159 0.209 . 120 . 2774 . . 'X-RAY DIFFRACTION' 3.634 4.578 14 100.000 2669 . 0.161 0.179 . 109 . 2778 . . 'X-RAY DIFFRACTION' 4.578 45.633 14 100.000 2640 . 0.209 0.200 . 147 . 2787 . . 'X-RAY DIFFRACTION' # _struct.entry_id 3RAV _struct.title 'Horse spleen apo-ferritin with bound Pentobarbital' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3RAV _struct_keywords.text '4-HELIX BUNDLE, IRON, IRON STORAGE, METAL-BINDING, METAL BINDING PROTEIN' _struct_keywords.pdbx_keywords 'METAL BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 2 ? J N N 4 ? K N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FRIL_HORSE _struct_ref.pdbx_db_accession P02791 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SSQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGAERLLKMQNQRGGRALFQD LQKPSQDEWGTTLDAMKAAIVLEKSLNQALLDLHALGSAQADPHLCDFLESHFLDEEVKLIKKMGDHLTNIQRLVGSQAG LGEYLFERLTLKHD ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3RAV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 174 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P02791 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 175 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 174 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details 24-meric _pdbx_struct_assembly.oligomeric_count 24 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 99270 ? 1 MORE -879 ? 1 'SSA (A^2)' 134620 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 4 'crystal symmetry operation' 4_555 x,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 5 'crystal symmetry operation' 5_555 z,x,y 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 6 'crystal symmetry operation' 6_555 z,-x,-y 0.0000000000 0.0000000000 1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 7 'crystal symmetry operation' 7_555 -z,-x,y 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 8 'crystal symmetry operation' 8_555 -z,x,-y 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 9 'crystal symmetry operation' 9_555 y,z,x 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 10 'crystal symmetry operation' 10_555 -y,z,-x 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 11 'crystal symmetry operation' 11_555 y,-z,-x 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 12 'crystal symmetry operation' 12_555 -y,-z,x 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 13 'crystal symmetry operation' 13_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 14 'crystal symmetry operation' 14_555 -y,-x,-z 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 15 'crystal symmetry operation' 15_555 y,-x,z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 16 'crystal symmetry operation' 16_555 -y,x,z 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 17 'crystal symmetry operation' 17_555 x,z,-y 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 18 'crystal symmetry operation' 18_555 -x,z,y -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 19 'crystal symmetry operation' 19_555 -x,-z,-y -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 20 'crystal symmetry operation' 20_555 x,-z,y 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 21 'crystal symmetry operation' 21_555 z,y,-x 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 22 'crystal symmetry operation' 22_555 z,-y,x 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 23 'crystal symmetry operation' 23_555 -z,y,x 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 24 'crystal symmetry operation' 24_555 -z,-y,-x 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 9 ? ASP A 38 ? SER A 9 ASP A 38 1 ? 30 HELX_P HELX_P2 2 LEU A 44 ? GLY A 73 ? LEU A 44 GLY A 73 1 ? 30 HELX_P HELX_P3 3 THR A 91 ? GLN A 120 ? THR A 91 GLN A 120 1 ? 30 HELX_P HELX_P4 4 ASP A 122 ? PHE A 133 ? ASP A 122 PHE A 133 1 ? 12 HELX_P HELX_P5 5 PHE A 133 ? VAL A 155 ? PHE A 133 VAL A 155 1 ? 23 HELX_P HELX_P6 6 GLN A 158 ? THR A 170 ? GLN A 158 THR A 170 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A GLU 11 OE2 ? ? ? 1_555 I CD . CD ? ? A GLU 11 A CD 182 1_555 ? ? ? ? ? ? ? 2.659 ? ? metalc2 metalc ? ? A GLU 11 OE1 ? ? ? 1_555 I CD . CD ? ? A GLU 11 A CD 182 1_555 ? ? ? ? ? ? ? 2.679 ? ? metalc3 metalc ? ? A GLU 53 OE1 ? ? ? 1_555 D CD . CD ? ? A GLU 53 A CD 177 1_555 ? ? ? ? ? ? ? 2.572 ? ? metalc4 metalc ? ? A GLU 56 OE1 ? ? ? 1_555 C CD . CD ? ? A GLU 56 A CD 176 1_555 ? ? ? ? ? ? ? 2.544 ? ? metalc5 metalc ? ? A GLU 56 OE2 ? ? ? 1_555 D CD . CD ? ? A GLU 56 A CD 177 1_555 ? ? ? ? ? ? ? 2.670 ? ? metalc6 metalc ? ? A GLU 57 OE2 ? ? ? 1_555 C CD . CD ? ? A GLU 57 A CD 176 1_555 ? ? ? ? ? ? ? 2.684 ? ? metalc7 metalc ? ? A GLU 60 OE2 ? ? ? 1_555 C CD . CD ? ? A GLU 60 A CD 176 1_555 ? ? ? ? ? ? ? 2.625 ? ? metalc8 metalc ? ? A GLU 60 OE1 ? ? ? 1_555 C CD . CD ? ? A GLU 60 A CD 176 1_555 ? ? ? ? ? ? ? 2.647 ? ? metalc9 metalc ? ? A ASP 80 OD2 ? ? ? 1_555 B CD . CD ? ? A ASP 80 A CD 175 1_555 ? ? ? ? ? ? ? 2.259 ? ? metalc10 metalc ? ? A GLU 130 OE1 ? ? ? 1_555 F CD . CD ? ? A GLU 130 A CD 179 1_555 ? ? ? ? ? ? ? 2.499 ? ? metalc11 metalc ? ? C CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 176 A HOH 276 1_555 ? ? ? ? ? ? ? 2.239 ? ? metalc12 metalc ? ? C CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 176 A HOH 285 1_555 ? ? ? ? ? ? ? 2.184 ? ? metalc13 metalc ? ? D CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 177 A HOH 283 1_555 ? ? ? ? ? ? ? 2.417 ? ? metalc14 metalc ? ? F CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 179 A HOH 277 1_555 ? ? ? ? ? ? ? 2.298 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE2 ? A GLU 11 ? A GLU 11 ? 1_555 CD ? I CD . ? A CD 182 ? 1_555 OE1 ? A GLU 11 ? A GLU 11 ? 1_555 48.7 ? 2 OE1 ? A GLU 53 ? A GLU 53 ? 1_555 CD ? D CD . ? A CD 177 ? 1_555 OE2 ? A GLU 56 ? A GLU 56 ? 1_555 99.4 ? 3 OE1 ? A GLU 53 ? A GLU 53 ? 1_555 CD ? D CD . ? A CD 177 ? 1_555 O ? K HOH . ? A HOH 283 ? 1_555 152.6 ? 4 OE2 ? A GLU 56 ? A GLU 56 ? 1_555 CD ? D CD . ? A CD 177 ? 1_555 O ? K HOH . ? A HOH 283 ? 1_555 66.6 ? 5 OE1 ? A GLU 56 ? A GLU 56 ? 1_555 CD ? C CD . ? A CD 176 ? 1_555 OE2 ? A GLU 57 ? A GLU 57 ? 1_555 94.9 ? 6 OE1 ? A GLU 56 ? A GLU 56 ? 1_555 CD ? C CD . ? A CD 176 ? 1_555 OE2 ? A GLU 60 ? A GLU 60 ? 1_555 82.1 ? 7 OE2 ? A GLU 57 ? A GLU 57 ? 1_555 CD ? C CD . ? A CD 176 ? 1_555 OE2 ? A GLU 60 ? A GLU 60 ? 1_555 110.3 ? 8 OE1 ? A GLU 56 ? A GLU 56 ? 1_555 CD ? C CD . ? A CD 176 ? 1_555 OE1 ? A GLU 60 ? A GLU 60 ? 1_555 117.9 ? 9 OE2 ? A GLU 57 ? A GLU 57 ? 1_555 CD ? C CD . ? A CD 176 ? 1_555 OE1 ? A GLU 60 ? A GLU 60 ? 1_555 74.0 ? 10 OE2 ? A GLU 60 ? A GLU 60 ? 1_555 CD ? C CD . ? A CD 176 ? 1_555 OE1 ? A GLU 60 ? A GLU 60 ? 1_555 49.5 ? 11 OE1 ? A GLU 56 ? A GLU 56 ? 1_555 CD ? C CD . ? A CD 176 ? 1_555 O ? K HOH . ? A HOH 276 ? 1_555 158.3 ? 12 OE2 ? A GLU 57 ? A GLU 57 ? 1_555 CD ? C CD . ? A CD 176 ? 1_555 O ? K HOH . ? A HOH 276 ? 1_555 65.0 ? 13 OE2 ? A GLU 60 ? A GLU 60 ? 1_555 CD ? C CD . ? A CD 176 ? 1_555 O ? K HOH . ? A HOH 276 ? 1_555 111.6 ? 14 OE1 ? A GLU 60 ? A GLU 60 ? 1_555 CD ? C CD . ? A CD 176 ? 1_555 O ? K HOH . ? A HOH 276 ? 1_555 66.3 ? 15 OE1 ? A GLU 56 ? A GLU 56 ? 1_555 CD ? C CD . ? A CD 176 ? 1_555 O ? K HOH . ? A HOH 285 ? 1_555 64.9 ? 16 OE2 ? A GLU 57 ? A GLU 57 ? 1_555 CD ? C CD . ? A CD 176 ? 1_555 O ? K HOH . ? A HOH 285 ? 1_555 157.7 ? 17 OE2 ? A GLU 60 ? A GLU 60 ? 1_555 CD ? C CD . ? A CD 176 ? 1_555 O ? K HOH . ? A HOH 285 ? 1_555 59.8 ? 18 OE1 ? A GLU 60 ? A GLU 60 ? 1_555 CD ? C CD . ? A CD 176 ? 1_555 O ? K HOH . ? A HOH 285 ? 1_555 106.1 ? 19 O ? K HOH . ? A HOH 276 ? 1_555 CD ? C CD . ? A CD 176 ? 1_555 O ? K HOH . ? A HOH 285 ? 1_555 136.2 ? 20 OE1 ? A GLU 130 ? A GLU 130 ? 1_555 CD ? F CD . ? A CD 179 ? 1_555 O ? K HOH . ? A HOH 277 ? 1_555 97.9 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CD 175 ? 4 'BINDING SITE FOR RESIDUE CD A 175' AC2 Software A CD 176 ? 5 'BINDING SITE FOR RESIDUE CD A 176' AC3 Software A CD 177 ? 3 'BINDING SITE FOR RESIDUE CD A 177' AC4 Software A CD 178 ? 3 'BINDING SITE FOR RESIDUE CD A 178' AC5 Software A CD 179 ? 5 'BINDING SITE FOR RESIDUE CD A 179' AC6 Software A SO4 180 ? 6 'BINDING SITE FOR RESIDUE SO4 A 180' AC7 Software A SO4 181 ? 8 'BINDING SITE FOR RESIDUE SO4 A 181' AC8 Software A CD 182 ? 1 'BINDING SITE FOR RESIDUE CD A 182' AC9 Software A RAV 183 ? 9 'BINDING SITE FOR RESIDUE RAV A 183' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ASP A 80 ? ASP A 80 . ? 72_555 ? 2 AC1 4 ASP A 80 ? ASP A 80 . ? 1_555 ? 3 AC1 4 GLN A 82 ? GLN A 82 . ? 51_555 ? 4 AC1 4 GLN A 82 ? GLN A 82 . ? 22_555 ? 5 AC2 5 GLU A 56 ? GLU A 56 . ? 1_555 ? 6 AC2 5 GLU A 57 ? GLU A 57 . ? 1_555 ? 7 AC2 5 GLU A 60 ? GLU A 60 . ? 1_555 ? 8 AC2 5 HOH K . ? HOH A 276 . ? 1_555 ? 9 AC2 5 HOH K . ? HOH A 285 . ? 1_555 ? 10 AC3 3 GLU A 53 ? GLU A 53 . ? 1_555 ? 11 AC3 3 GLU A 56 ? GLU A 56 . ? 1_555 ? 12 AC3 3 HOH K . ? HOH A 283 . ? 1_555 ? 13 AC4 3 ASP A 127 ? ASP A 127 . ? 9_555 ? 14 AC4 3 ASP A 127 ? ASP A 127 . ? 5_555 ? 15 AC4 3 ASP A 127 ? ASP A 127 . ? 1_555 ? 16 AC5 5 GLU A 130 ? GLU A 130 . ? 1_555 ? 17 AC5 5 GLU A 130 ? GLU A 130 . ? 9_555 ? 18 AC5 5 GLU A 130 ? GLU A 130 . ? 5_555 ? 19 AC5 5 HOH K . ? HOH A 277 . ? 9_555 ? 20 AC5 5 HOH K . ? HOH A 277 . ? 1_555 ? 21 AC6 6 GLN A 6 ? GLN A 6 . ? 1_555 ? 22 AC6 6 ASN A 7 ? ASN A 7 . ? 1_555 ? 23 AC6 6 HOH K . ? HOH A 239 . ? 5_555 ? 24 AC6 6 HOH K . ? HOH A 244 . ? 1_555 ? 25 AC6 6 HOH K . ? HOH A 297 . ? 5_555 ? 26 AC6 6 HOH K . ? HOH A 318 . ? 1_555 ? 27 AC7 8 LYS A 143 ? LYS A 143 . ? 1_555 ? 28 AC7 8 ASP A 146 ? ASP A 146 . ? 1_555 ? 29 AC7 8 HIS A 147 ? HIS A 147 . ? 1_555 ? 30 AC7 8 HOH K . ? HOH A 265 . ? 1_555 ? 31 AC7 8 HOH K . ? HOH A 266 . ? 1_555 ? 32 AC7 8 HOH K . ? HOH A 278 . ? 1_555 ? 33 AC7 8 HOH K . ? HOH A 324 . ? 1_555 ? 34 AC7 8 HOH K . ? HOH A 362 . ? 1_555 ? 35 AC8 1 GLU A 11 ? GLU A 11 . ? 1_555 ? 36 AC9 9 LEU A 24 ? LEU A 24 . ? 1_555 ? 37 AC9 9 LEU A 24 ? LEU A 24 . ? 22_555 ? 38 AC9 9 SER A 27 ? SER A 27 . ? 22_555 ? 39 AC9 9 SER A 27 ? SER A 27 . ? 1_555 ? 40 AC9 9 TYR A 28 ? TYR A 28 . ? 1_555 ? 41 AC9 9 ALA A 55 ? ALA A 55 . ? 1_555 ? 42 AC9 9 ARG A 59 ? ARG A 59 . ? 1_555 ? 43 AC9 9 ARG A 59 ? ARG A 59 . ? 22_555 ? 44 AC9 9 LEU A 81 ? LEU A 81 . ? 22_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 241 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 261 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 42 ? ? -120.52 -58.04 2 1 PHE A 133 ? ? -132.84 -46.84 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id C13 _pdbx_validate_chiral.label_alt_id B _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id RAV _pdbx_validate_chiral.auth_seq_id 183 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A CD 175 ? B CD . 2 1 A RAV 183 ? J RAV . 3 1 A RAV 183 ? J RAV . # _pdbx_phasing_MR.entry_id 3RAV _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor 56.240 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.500 _pdbx_phasing_MR.d_res_low_rotation 45.620 _pdbx_phasing_MR.d_res_high_translation 2.500 _pdbx_phasing_MR.d_res_low_translation 45.620 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 1 ? A SER 1 2 1 Y 1 A GLY 156 ? A GLY 156 3 1 Y 1 A SER 157 ? A SER 157 4 1 Y 1 A LYS 172 ? A LYS 172 5 1 Y 1 A HIS 173 ? A HIS 173 6 1 Y 1 A ASP 174 ? A ASP 174 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CD CD CD N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 MET N N N N 231 MET CA C N S 232 MET C C N N 233 MET O O N N 234 MET CB C N N 235 MET CG C N N 236 MET SD S N N 237 MET CE C N N 238 MET OXT O N N 239 MET H H N N 240 MET H2 H N N 241 MET HA H N N 242 MET HB2 H N N 243 MET HB3 H N N 244 MET HG2 H N N 245 MET HG3 H N N 246 MET HE1 H N N 247 MET HE2 H N N 248 MET HE3 H N N 249 MET HXT H N N 250 PHE N N N N 251 PHE CA C N S 252 PHE C C N N 253 PHE O O N N 254 PHE CB C N N 255 PHE CG C Y N 256 PHE CD1 C Y N 257 PHE CD2 C Y N 258 PHE CE1 C Y N 259 PHE CE2 C Y N 260 PHE CZ C Y N 261 PHE OXT O N N 262 PHE H H N N 263 PHE H2 H N N 264 PHE HA H N N 265 PHE HB2 H N N 266 PHE HB3 H N N 267 PHE HD1 H N N 268 PHE HD2 H N N 269 PHE HE1 H N N 270 PHE HE2 H N N 271 PHE HZ H N N 272 PHE HXT H N N 273 PRO N N N N 274 PRO CA C N S 275 PRO C C N N 276 PRO O O N N 277 PRO CB C N N 278 PRO CG C N N 279 PRO CD C N N 280 PRO OXT O N N 281 PRO H H N N 282 PRO HA H N N 283 PRO HB2 H N N 284 PRO HB3 H N N 285 PRO HG2 H N N 286 PRO HG3 H N N 287 PRO HD2 H N N 288 PRO HD3 H N N 289 PRO HXT H N N 290 RAV C1 C N N 291 RAV C2 C N N 292 RAV N3 N N N 293 RAV C4 C N N 294 RAV N5 N N N 295 RAV C6 C N N 296 RAV O7 O N N 297 RAV O8 O N N 298 RAV O9 O N N 299 RAV C12 C N N 300 RAV C13 C N S 301 RAV C14 C N N 302 RAV C15 C N N 303 RAV C16 C N N 304 RAV C17 C N N 305 RAV C18 C N N 306 RAV HN3 H N N 307 RAV HN5 H N N 308 RAV H12 H N N 309 RAV H12A H N N 310 RAV H13 H N N 311 RAV H14 H N N 312 RAV H14A H N N 313 RAV H14B H N N 314 RAV H15 H N N 315 RAV H15A H N N 316 RAV H16 H N N 317 RAV H16A H N N 318 RAV H17 H N N 319 RAV H17A H N N 320 RAV H17B H N N 321 RAV H18 H N N 322 RAV H18A H N N 323 RAV H18B H N N 324 SER N N N N 325 SER CA C N S 326 SER C C N N 327 SER O O N N 328 SER CB C N N 329 SER OG O N N 330 SER OXT O N N 331 SER H H N N 332 SER H2 H N N 333 SER HA H N N 334 SER HB2 H N N 335 SER HB3 H N N 336 SER HG H N N 337 SER HXT H N N 338 SO4 S S N N 339 SO4 O1 O N N 340 SO4 O2 O N N 341 SO4 O3 O N N 342 SO4 O4 O N N 343 THR N N N N 344 THR CA C N S 345 THR C C N N 346 THR O O N N 347 THR CB C N R 348 THR OG1 O N N 349 THR CG2 C N N 350 THR OXT O N N 351 THR H H N N 352 THR H2 H N N 353 THR HA H N N 354 THR HB H N N 355 THR HG1 H N N 356 THR HG21 H N N 357 THR HG22 H N N 358 THR HG23 H N N 359 THR HXT H N N 360 TRP N N N N 361 TRP CA C N S 362 TRP C C N N 363 TRP O O N N 364 TRP CB C N N 365 TRP CG C Y N 366 TRP CD1 C Y N 367 TRP CD2 C Y N 368 TRP NE1 N Y N 369 TRP CE2 C Y N 370 TRP CE3 C Y N 371 TRP CZ2 C Y N 372 TRP CZ3 C Y N 373 TRP CH2 C Y N 374 TRP OXT O N N 375 TRP H H N N 376 TRP H2 H N N 377 TRP HA H N N 378 TRP HB2 H N N 379 TRP HB3 H N N 380 TRP HD1 H N N 381 TRP HE1 H N N 382 TRP HE3 H N N 383 TRP HZ2 H N N 384 TRP HZ3 H N N 385 TRP HH2 H N N 386 TRP HXT H N N 387 TYR N N N N 388 TYR CA C N S 389 TYR C C N N 390 TYR O O N N 391 TYR CB C N N 392 TYR CG C Y N 393 TYR CD1 C Y N 394 TYR CD2 C Y N 395 TYR CE1 C Y N 396 TYR CE2 C Y N 397 TYR CZ C Y N 398 TYR OH O N N 399 TYR OXT O N N 400 TYR H H N N 401 TYR H2 H N N 402 TYR HA H N N 403 TYR HB2 H N N 404 TYR HB3 H N N 405 TYR HD1 H N N 406 TYR HD2 H N N 407 TYR HE1 H N N 408 TYR HE2 H N N 409 TYR HH H N N 410 TYR HXT H N N 411 VAL N N N N 412 VAL CA C N S 413 VAL C C N N 414 VAL O O N N 415 VAL CB C N N 416 VAL CG1 C N N 417 VAL CG2 C N N 418 VAL OXT O N N 419 VAL H H N N 420 VAL H2 H N N 421 VAL HA H N N 422 VAL HB H N N 423 VAL HG11 H N N 424 VAL HG12 H N N 425 VAL HG13 H N N 426 VAL HG21 H N N 427 VAL HG22 H N N 428 VAL HG23 H N N 429 VAL HXT H N N 430 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 RAV C6 C1 sing N N 277 RAV C2 C1 sing N N 278 RAV C1 C13 sing N N 279 RAV C1 C12 sing N N 280 RAV N3 C2 sing N N 281 RAV C2 O8 doub N N 282 RAV C4 N3 sing N N 283 RAV N3 HN3 sing N N 284 RAV O9 C4 doub N N 285 RAV C4 N5 sing N N 286 RAV N5 C6 sing N N 287 RAV N5 HN5 sing N N 288 RAV C6 O7 doub N N 289 RAV C12 C18 sing N N 290 RAV C12 H12 sing N N 291 RAV C12 H12A sing N N 292 RAV C15 C13 sing N N 293 RAV C13 C14 sing N N 294 RAV C13 H13 sing N N 295 RAV C14 H14 sing N N 296 RAV C14 H14A sing N N 297 RAV C14 H14B sing N N 298 RAV C15 C16 sing N N 299 RAV C15 H15 sing N N 300 RAV C15 H15A sing N N 301 RAV C17 C16 sing N N 302 RAV C16 H16 sing N N 303 RAV C16 H16A sing N N 304 RAV C17 H17 sing N N 305 RAV C17 H17A sing N N 306 RAV C17 H17B sing N N 307 RAV C18 H18 sing N N 308 RAV C18 H18A sing N N 309 RAV C18 H18B sing N N 310 SER N CA sing N N 311 SER N H sing N N 312 SER N H2 sing N N 313 SER CA C sing N N 314 SER CA CB sing N N 315 SER CA HA sing N N 316 SER C O doub N N 317 SER C OXT sing N N 318 SER CB OG sing N N 319 SER CB HB2 sing N N 320 SER CB HB3 sing N N 321 SER OG HG sing N N 322 SER OXT HXT sing N N 323 SO4 S O1 doub N N 324 SO4 S O2 doub N N 325 SO4 S O3 sing N N 326 SO4 S O4 sing N N 327 THR N CA sing N N 328 THR N H sing N N 329 THR N H2 sing N N 330 THR CA C sing N N 331 THR CA CB sing N N 332 THR CA HA sing N N 333 THR C O doub N N 334 THR C OXT sing N N 335 THR CB OG1 sing N N 336 THR CB CG2 sing N N 337 THR CB HB sing N N 338 THR OG1 HG1 sing N N 339 THR CG2 HG21 sing N N 340 THR CG2 HG22 sing N N 341 THR CG2 HG23 sing N N 342 THR OXT HXT sing N N 343 TRP N CA sing N N 344 TRP N H sing N N 345 TRP N H2 sing N N 346 TRP CA C sing N N 347 TRP CA CB sing N N 348 TRP CA HA sing N N 349 TRP C O doub N N 350 TRP C OXT sing N N 351 TRP CB CG sing N N 352 TRP CB HB2 sing N N 353 TRP CB HB3 sing N N 354 TRP CG CD1 doub Y N 355 TRP CG CD2 sing Y N 356 TRP CD1 NE1 sing Y N 357 TRP CD1 HD1 sing N N 358 TRP CD2 CE2 doub Y N 359 TRP CD2 CE3 sing Y N 360 TRP NE1 CE2 sing Y N 361 TRP NE1 HE1 sing N N 362 TRP CE2 CZ2 sing Y N 363 TRP CE3 CZ3 doub Y N 364 TRP CE3 HE3 sing N N 365 TRP CZ2 CH2 doub Y N 366 TRP CZ2 HZ2 sing N N 367 TRP CZ3 CH2 sing Y N 368 TRP CZ3 HZ3 sing N N 369 TRP CH2 HH2 sing N N 370 TRP OXT HXT sing N N 371 TYR N CA sing N N 372 TYR N H sing N N 373 TYR N H2 sing N N 374 TYR CA C sing N N 375 TYR CA CB sing N N 376 TYR CA HA sing N N 377 TYR C O doub N N 378 TYR C OXT sing N N 379 TYR CB CG sing N N 380 TYR CB HB2 sing N N 381 TYR CB HB3 sing N N 382 TYR CG CD1 doub Y N 383 TYR CG CD2 sing Y N 384 TYR CD1 CE1 sing Y N 385 TYR CD1 HD1 sing N N 386 TYR CD2 CE2 doub Y N 387 TYR CD2 HD2 sing N N 388 TYR CE1 CZ doub Y N 389 TYR CE1 HE1 sing N N 390 TYR CE2 CZ sing Y N 391 TYR CE2 HE2 sing N N 392 TYR CZ OH sing N N 393 TYR OH HH sing N N 394 TYR OXT HXT sing N N 395 VAL N CA sing N N 396 VAL N H sing N N 397 VAL N H2 sing N N 398 VAL CA C sing N N 399 VAL CA CB sing N N 400 VAL CA HA sing N N 401 VAL C O doub N N 402 VAL C OXT sing N N 403 VAL CB CG1 sing N N 404 VAL CB CG2 sing N N 405 VAL CB HB sing N N 406 VAL CG1 HG11 sing N N 407 VAL CG1 HG12 sing N N 408 VAL CG1 HG13 sing N N 409 VAL CG2 HG21 sing N N 410 VAL CG2 HG22 sing N N 411 VAL CG2 HG23 sing N N 412 VAL OXT HXT sing N N 413 # _atom_sites.entry_id 3RAV _atom_sites.fract_transf_matrix[1][1] 0.005480 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.005480 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005480 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CD N O S # loop_