data_3RCK # _entry.id 3RCK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3RCK pdb_00003rck 10.2210/pdb3rck/pdb RCSB RCSB064764 ? ? WWPDB D_1000064764 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3R49 . unspecified PDB 3R4G . unspecified PDB 3R54 . unspecified PDB 3R56 . unspecified PDB 3R57 . unspecified PDB 3R59 . unspecified PDB 3RCF . unspecified PDB 3RCG . unspecified PDB 3RCI . unspecified PDB 3RCL . unspecified PDB 3RD9 . unspecified PDB 3RDA . unspecified PDB 3RDB . unspecified PDB 3RDC . unspecified PDB 3RDD . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3RCK _pdbx_database_status.recvd_initial_deposition_date 2011-03-31 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Colliandre, L.' 1 'Ahmed-Belkacem, H.' 2 'Bessin, Y.' 3 'Pawlotsky, J.M.' 4 'Guichou, J.F.' 5 # _citation.id primary _citation.title 'Fragment-based discovery of a new family of non-peptidic small-molecule cyclophilin inhibitors with potent antiviral activities.' _citation.journal_abbrev 'Nat Commun' _citation.journal_volume 7 _citation.page_first 12777 _citation.page_last 12777 _citation.year 2016 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 2041-1723 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 27652979 _citation.pdbx_database_id_DOI 10.1038/ncomms12777 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ahmed-Belkacem, A.' 1 ? primary 'Colliandre, L.' 2 ? primary 'Ahnou, N.' 3 ? primary 'Nevers, Q.' 4 ? primary 'Gelin, M.' 5 ? primary 'Bessin, Y.' 6 ? primary 'Brillet, R.' 7 ? primary 'Cala, O.' 8 ? primary 'Douguet, D.' 9 ? primary 'Bourguet, W.' 10 ? primary 'Krimm, I.' 11 ? primary 'Pawlotsky, J.M.' 12 ? primary 'Guichou, J.F.' 13 ? # _cell.entry_id 3RCK _cell.length_a 57.328 _cell.length_b 57.328 _cell.length_c 87.397 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3RCK _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Peptidyl-prolyl cis-trans isomerase F, mitochondrial' 17870.400 1 5.2.1.8 K175I 'UNP residues 43-207' ? 2 non-polymer syn piperazine-1-carbaldehyde 114.146 5 ? ? ? ? 3 water nat water 18.015 234 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PPIase F, Cyclophilin F, Rotamase F' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MSGNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIY GSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGSKSGRTSKKIVIT DCGQLS ; _entity_poly.pdbx_seq_one_letter_code_can ;MSGNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIY GSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGSKSGRTSKKIVIT DCGQLS ; _entity_poly.pdbx_strand_id X _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 GLY n 1 4 ASN n 1 5 PRO n 1 6 LEU n 1 7 VAL n 1 8 TYR n 1 9 LEU n 1 10 ASP n 1 11 VAL n 1 12 ASP n 1 13 ALA n 1 14 ASN n 1 15 GLY n 1 16 LYS n 1 17 PRO n 1 18 LEU n 1 19 GLY n 1 20 ARG n 1 21 VAL n 1 22 VAL n 1 23 LEU n 1 24 GLU n 1 25 LEU n 1 26 LYS n 1 27 ALA n 1 28 ASP n 1 29 VAL n 1 30 VAL n 1 31 PRO n 1 32 LYS n 1 33 THR n 1 34 ALA n 1 35 GLU n 1 36 ASN n 1 37 PHE n 1 38 ARG n 1 39 ALA n 1 40 LEU n 1 41 CYS n 1 42 THR n 1 43 GLY n 1 44 GLU n 1 45 LYS n 1 46 GLY n 1 47 PHE n 1 48 GLY n 1 49 TYR n 1 50 LYS n 1 51 GLY n 1 52 SER n 1 53 THR n 1 54 PHE n 1 55 HIS n 1 56 ARG n 1 57 VAL n 1 58 ILE n 1 59 PRO n 1 60 SER n 1 61 PHE n 1 62 MET n 1 63 CYS n 1 64 GLN n 1 65 ALA n 1 66 GLY n 1 67 ASP n 1 68 PHE n 1 69 THR n 1 70 ASN n 1 71 HIS n 1 72 ASN n 1 73 GLY n 1 74 THR n 1 75 GLY n 1 76 GLY n 1 77 LYS n 1 78 SER n 1 79 ILE n 1 80 TYR n 1 81 GLY n 1 82 SER n 1 83 ARG n 1 84 PHE n 1 85 PRO n 1 86 ASP n 1 87 GLU n 1 88 ASN n 1 89 PHE n 1 90 THR n 1 91 LEU n 1 92 LYS n 1 93 HIS n 1 94 VAL n 1 95 GLY n 1 96 PRO n 1 97 GLY n 1 98 VAL n 1 99 LEU n 1 100 SER n 1 101 MET n 1 102 ALA n 1 103 ASN n 1 104 ALA n 1 105 GLY n 1 106 PRO n 1 107 ASN n 1 108 THR n 1 109 ASN n 1 110 GLY n 1 111 SER n 1 112 GLN n 1 113 PHE n 1 114 PHE n 1 115 ILE n 1 116 CYS n 1 117 THR n 1 118 ILE n 1 119 LYS n 1 120 THR n 1 121 ASP n 1 122 TRP n 1 123 LEU n 1 124 ASP n 1 125 GLY n 1 126 LYS n 1 127 HIS n 1 128 VAL n 1 129 VAL n 1 130 PHE n 1 131 GLY n 1 132 HIS n 1 133 VAL n 1 134 ILE n 1 135 GLU n 1 136 GLY n 1 137 MET n 1 138 ASP n 1 139 VAL n 1 140 VAL n 1 141 LYS n 1 142 LYS n 1 143 ILE n 1 144 GLU n 1 145 SER n 1 146 PHE n 1 147 GLY n 1 148 SER n 1 149 LYS n 1 150 SER n 1 151 GLY n 1 152 ARG n 1 153 THR n 1 154 SER n 1 155 LYS n 1 156 LYS n 1 157 ILE n 1 158 VAL n 1 159 ILE n 1 160 THR n 1 161 ASP n 1 162 CYS n 1 163 GLY n 1 164 GLN n 1 165 LEU n 1 166 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PPIF, CYP3' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PPIF_HUMAN _struct_ref.pdbx_db_accession P30405 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SGNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITD CGQLS ; _struct_ref.pdbx_align_begin 43 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3RCK _struct_ref_seq.pdbx_strand_id X _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 166 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P30405 _struct_ref_seq.db_align_beg 43 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 207 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 43 _struct_ref_seq.pdbx_auth_seq_align_end 207 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3RCK MET X 1 ? UNP P30405 ? ? 'initiating methionine' 42 1 1 3RCK ILE X 134 ? UNP P30405 LYS 175 'engineered mutation' 175 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 1FP non-polymer . piperazine-1-carbaldehyde ? 'C5 H10 N2 O' 114.146 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3RCK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.01 _exptl_crystal.density_percent_sol 38.78 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.3 _exptl_crystal_grow.pdbx_details '30% PEG4000, pH 7.3, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2008-04-18 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.933 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-2 _diffrn_source.pdbx_wavelength 0.933 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3RCK _reflns.observed_criterion_sigma_I 12.3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 36.8 _reflns.d_resolution_high 1.26 _reflns.number_obs 36483 _reflns.number_all 37884 _reflns.percent_possible_obs 96.3 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.043 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.26 _reflns_shell.d_res_low 1.293 _reflns_shell.percent_possible_all 77.8 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.487 _reflns_shell.meanI_over_sigI_obs 1.3 _reflns_shell.pdbx_redundancy 2.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3RCK _refine.ls_number_reflns_obs 36483 _refine.ls_number_reflns_all 37884 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 36.8 _refine.ls_d_res_high 1.26 _refine.ls_percent_reflns_obs 95.91 _refine.ls_R_factor_obs 0.16481 _refine.ls_R_factor_all 0.164 _refine.ls_R_factor_R_work 0.16393 _refine.ls_R_factor_R_free 0.18147 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1927 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.970 _refine.correlation_coeff_Fo_to_Fc_free 0.965 _refine.B_iso_mean 8.053 _refine.aniso_B[1][1] 0.05 _refine.aniso_B[2][2] 0.05 _refine.aniso_B[3][3] -0.09 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 2BIT' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.049 _refine.overall_SU_ML 0.031 _refine.overall_SU_B 0.729 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R 0.049 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1231 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 40 _refine_hist.number_atoms_solvent 234 _refine_hist.number_atoms_total 1505 _refine_hist.d_res_high 1.26 _refine_hist.d_res_low 36.8 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.008 0.022 ? 1361 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.001 0.020 ? 986 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.234 1.985 ? 1826 ? 'X-RAY DIFFRACTION' r_angle_other_deg 0.811 3.014 ? 2336 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.243 5.000 ? 170 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 31.359 23.962 ? 53 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 11.079 15.000 ? 233 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 15.491 15.000 ? 6 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.077 0.200 ? 194 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.005 0.021 ? 1494 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.001 0.020 ? 266 ? 'X-RAY DIFFRACTION' r_mcbond_it 0.538 1.500 ? 822 ? 'X-RAY DIFFRACTION' r_mcbond_other 0.154 1.500 ? 347 ? 'X-RAY DIFFRACTION' r_mcangle_it 0.943 2.000 ? 1330 ? 'X-RAY DIFFRACTION' r_scbond_it 1.287 3.000 ? 539 ? 'X-RAY DIFFRACTION' r_scangle_it 1.973 4.500 ? 493 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.260 _refine_ls_shell.d_res_low 1.293 _refine_ls_shell.number_reflns_R_work 1888 _refine_ls_shell.R_factor_R_work 0.461 _refine_ls_shell.percent_reflns_obs 68.52 _refine_ls_shell.R_factor_R_free 0.476 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 91 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3RCK _struct.title 'Human Cyclophilin D Complexed with a Fragment' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3RCK _struct_keywords.pdbx_keywords 'ISOMERASE/ISOMERASE INHIBITOR' _struct_keywords.text 'beta barrel, prolyl cis/trans isomerase, mitochondria, inhibitor, ISOMERASE-ISOMERASE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 VAL A 30 ? GLY A 43 ? VAL X 71 GLY X 84 1 ? 14 HELX_P HELX_P2 2 THR A 120 ? ASP A 124 ? THR X 161 ASP X 165 5 ? 5 HELX_P HELX_P3 3 GLY A 136 ? PHE A 146 ? GLY X 177 PHE X 187 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 54 ? ILE A 58 ? PHE X 95 ILE X 99 A 2 MET A 62 ? ALA A 65 ? MET X 103 ALA X 106 A 3 PHE A 113 ? CYS A 116 ? PHE X 154 CYS X 157 A 4 VAL A 98 ? MET A 101 ? VAL X 139 MET X 142 A 5 VAL A 129 ? GLU A 135 ? VAL X 170 GLU X 176 A 6 LYS A 16 ? LEU A 25 ? LYS X 57 LEU X 66 A 7 LEU A 6 ? ALA A 13 ? LEU X 47 ALA X 54 A 8 ILE A 157 ? GLN A 164 ? ILE X 198 GLN X 205 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 56 ? N ARG X 97 O GLN A 64 ? O GLN X 105 A 2 3 N ALA A 65 ? N ALA X 106 O PHE A 113 ? O PHE X 154 A 3 4 O PHE A 114 ? O PHE X 155 N SER A 100 ? N SER X 141 A 4 5 N LEU A 99 ? N LEU X 140 O PHE A 130 ? O PHE X 171 A 5 6 O GLU A 135 ? O GLU X 176 N VAL A 22 ? N VAL X 63 A 6 7 O LEU A 18 ? O LEU X 59 N VAL A 11 ? N VAL X 52 A 7 8 N ASP A 10 ? N ASP X 51 O ASP A 161 ? O ASP X 202 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software X 1FP 208 ? 10 'BINDING SITE FOR RESIDUE 1FP X 208' AC2 Software X 1FP 209 ? 11 'BINDING SITE FOR RESIDUE 1FP X 209' AC3 Software X 1FP 210 ? 10 'BINDING SITE FOR RESIDUE 1FP X 210' AC4 Software X 1FP 211 ? 7 'BINDING SITE FOR RESIDUE 1FP X 211' AC5 Software X 1FP 212 ? 10 'BINDING SITE FOR RESIDUE 1FP X 212' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 GLY A 73 ? GLY X 114 . ? 1_555 ? 2 AC1 10 THR A 74 ? THR X 115 . ? 1_555 ? 3 AC1 10 ASN A 103 ? ASN X 144 . ? 1_555 ? 4 AC1 10 THR A 108 ? THR X 149 . ? 1_555 ? 5 AC1 10 GLN A 112 ? GLN X 153 . ? 1_555 ? 6 AC1 10 1FP C . ? 1FP X 209 . ? 1_555 ? 7 AC1 10 HOH G . ? HOH X 239 . ? 1_555 ? 8 AC1 10 HOH G . ? HOH X 240 . ? 1_555 ? 9 AC1 10 HOH G . ? HOH X 284 . ? 1_555 ? 10 AC1 10 HOH G . ? HOH X 297 . ? 4_454 ? 11 AC2 11 HIS A 55 ? HIS X 96 . ? 1_555 ? 12 AC2 11 ARG A 56 ? ARG X 97 . ? 1_555 ? 13 AC2 11 GLN A 64 ? GLN X 105 . ? 1_555 ? 14 AC2 11 GLY A 73 ? GLY X 114 . ? 1_555 ? 15 AC2 11 ASN A 103 ? ASN X 144 . ? 1_555 ? 16 AC2 11 GLN A 112 ? GLN X 153 . ? 1_555 ? 17 AC2 11 1FP B . ? 1FP X 208 . ? 1_555 ? 18 AC2 11 1FP D . ? 1FP X 210 . ? 1_555 ? 19 AC2 11 HOH G . ? HOH X 281 . ? 1_555 ? 20 AC2 11 HOH G . ? HOH X 298 . ? 1_555 ? 21 AC2 11 HOH G . ? HOH X 377 . ? 1_555 ? 22 AC3 10 PHE A 61 ? PHE X 102 . ? 1_555 ? 23 AC3 10 MET A 62 ? MET X 103 . ? 1_555 ? 24 AC3 10 GLN A 64 ? GLN X 105 . ? 1_555 ? 25 AC3 10 ALA A 102 ? ALA X 143 . ? 1_555 ? 26 AC3 10 ASN A 103 ? ASN X 144 . ? 1_555 ? 27 AC3 10 LEU A 123 ? LEU X 164 . ? 1_555 ? 28 AC3 10 HIS A 127 ? HIS X 168 . ? 1_555 ? 29 AC3 10 1FP C . ? 1FP X 209 . ? 1_555 ? 30 AC3 10 HOH G . ? HOH X 315 . ? 1_555 ? 31 AC3 10 HOH G . ? HOH X 403 . ? 1_555 ? 32 AC4 7 GLY A 15 ? GLY X 56 . ? 5_555 ? 33 AC4 7 ILE A 58 ? ILE X 99 . ? 1_555 ? 34 AC4 7 SER A 60 ? SER X 101 . ? 1_555 ? 35 AC4 7 PHE A 61 ? PHE X 102 . ? 1_555 ? 36 AC4 7 ILE A 118 ? ILE X 159 . ? 1_555 ? 37 AC4 7 LYS A 156 ? LYS X 197 . ? 5_555 ? 38 AC4 7 HOH G . ? HOH X 345 . ? 1_555 ? 39 AC5 10 ASN A 4 ? ASN X 45 . ? 1_555 ? 40 AC5 10 LYS A 26 ? LYS X 67 . ? 1_555 ? 41 AC5 10 ASP A 28 ? ASP X 69 . ? 1_555 ? 42 AC5 10 ASN A 70 ? ASN X 111 . ? 3_555 ? 43 AC5 10 THR A 74 ? THR X 115 . ? 3_555 ? 44 AC5 10 HOH G . ? HOH X 243 . ? 1_555 ? 45 AC5 10 HOH G . ? HOH X 244 . ? 1_555 ? 46 AC5 10 HOH G . ? HOH X 245 . ? 1_555 ? 47 AC5 10 HOH G . ? HOH X 246 . ? 1_555 ? 48 AC5 10 HOH G . ? HOH X 354 . ? 1_555 ? # _database_PDB_matrix.entry_id 3RCK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3RCK _atom_sites.fract_transf_matrix[1][1] 0.017443 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017443 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011442 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 42 ? ? ? X . n A 1 2 SER 2 43 ? ? ? X . n A 1 3 GLY 3 44 44 GLY GLY X . n A 1 4 ASN 4 45 45 ASN ASN X . n A 1 5 PRO 5 46 46 PRO PRO X . n A 1 6 LEU 6 47 47 LEU LEU X . n A 1 7 VAL 7 48 48 VAL VAL X . n A 1 8 TYR 8 49 49 TYR TYR X . n A 1 9 LEU 9 50 50 LEU LEU X . n A 1 10 ASP 10 51 51 ASP ASP X . n A 1 11 VAL 11 52 52 VAL VAL X . n A 1 12 ASP 12 53 53 ASP ASP X . n A 1 13 ALA 13 54 54 ALA ALA X . n A 1 14 ASN 14 55 55 ASN ASN X . n A 1 15 GLY 15 56 56 GLY GLY X . n A 1 16 LYS 16 57 57 LYS LYS X . n A 1 17 PRO 17 58 58 PRO PRO X . n A 1 18 LEU 18 59 59 LEU LEU X . n A 1 19 GLY 19 60 60 GLY GLY X . n A 1 20 ARG 20 61 61 ARG ARG X . n A 1 21 VAL 21 62 62 VAL VAL X . n A 1 22 VAL 22 63 63 VAL VAL X . n A 1 23 LEU 23 64 64 LEU LEU X . n A 1 24 GLU 24 65 65 GLU GLU X . n A 1 25 LEU 25 66 66 LEU LEU X . n A 1 26 LYS 26 67 67 LYS LYS X . n A 1 27 ALA 27 68 68 ALA ALA X . n A 1 28 ASP 28 69 69 ASP ASP X . n A 1 29 VAL 29 70 70 VAL VAL X . n A 1 30 VAL 30 71 71 VAL VAL X . n A 1 31 PRO 31 72 72 PRO PRO X . n A 1 32 LYS 32 73 73 LYS LYS X . n A 1 33 THR 33 74 74 THR THR X . n A 1 34 ALA 34 75 75 ALA ALA X . n A 1 35 GLU 35 76 76 GLU GLU X . n A 1 36 ASN 36 77 77 ASN ASN X . n A 1 37 PHE 37 78 78 PHE PHE X . n A 1 38 ARG 38 79 79 ARG ARG X . n A 1 39 ALA 39 80 80 ALA ALA X . n A 1 40 LEU 40 81 81 LEU LEU X . n A 1 41 CYS 41 82 82 CYS CYS X . n A 1 42 THR 42 83 83 THR THR X . n A 1 43 GLY 43 84 84 GLY GLY X . n A 1 44 GLU 44 85 85 GLU GLU X . n A 1 45 LYS 45 86 86 LYS LYS X . n A 1 46 GLY 46 87 87 GLY GLY X . n A 1 47 PHE 47 88 88 PHE PHE X . n A 1 48 GLY 48 89 89 GLY GLY X . n A 1 49 TYR 49 90 90 TYR TYR X . n A 1 50 LYS 50 91 91 LYS LYS X . n A 1 51 GLY 51 92 92 GLY GLY X . n A 1 52 SER 52 93 93 SER SER X . n A 1 53 THR 53 94 94 THR THR X . n A 1 54 PHE 54 95 95 PHE PHE X . n A 1 55 HIS 55 96 96 HIS HIS X . n A 1 56 ARG 56 97 97 ARG ARG X . n A 1 57 VAL 57 98 98 VAL VAL X . n A 1 58 ILE 58 99 99 ILE ILE X . n A 1 59 PRO 59 100 100 PRO PRO X . n A 1 60 SER 60 101 101 SER SER X . n A 1 61 PHE 61 102 102 PHE PHE X . n A 1 62 MET 62 103 103 MET MET X . n A 1 63 CYS 63 104 104 CYS CYS X . n A 1 64 GLN 64 105 105 GLN GLN X . n A 1 65 ALA 65 106 106 ALA ALA X . n A 1 66 GLY 66 107 107 GLY GLY X . n A 1 67 ASP 67 108 108 ASP ASP X . n A 1 68 PHE 68 109 109 PHE PHE X . n A 1 69 THR 69 110 110 THR THR X . n A 1 70 ASN 70 111 111 ASN ASN X . n A 1 71 HIS 71 112 112 HIS HIS X . n A 1 72 ASN 72 113 113 ASN ASN X . n A 1 73 GLY 73 114 114 GLY GLY X . n A 1 74 THR 74 115 115 THR THR X . n A 1 75 GLY 75 116 116 GLY GLY X . n A 1 76 GLY 76 117 117 GLY GLY X . n A 1 77 LYS 77 118 118 LYS LYS X . n A 1 78 SER 78 119 119 SER SER X . n A 1 79 ILE 79 120 120 ILE ILE X . n A 1 80 TYR 80 121 121 TYR TYR X . n A 1 81 GLY 81 122 122 GLY GLY X . n A 1 82 SER 82 123 123 SER SER X . n A 1 83 ARG 83 124 124 ARG ARG X . n A 1 84 PHE 84 125 125 PHE PHE X . n A 1 85 PRO 85 126 126 PRO PRO X . n A 1 86 ASP 86 127 127 ASP ASP X . n A 1 87 GLU 87 128 128 GLU GLU X . n A 1 88 ASN 88 129 129 ASN ASN X . n A 1 89 PHE 89 130 130 PHE PHE X . n A 1 90 THR 90 131 131 THR THR X . n A 1 91 LEU 91 132 132 LEU LEU X . n A 1 92 LYS 92 133 133 LYS LYS X . n A 1 93 HIS 93 134 134 HIS HIS X . n A 1 94 VAL 94 135 135 VAL VAL X . n A 1 95 GLY 95 136 136 GLY GLY X . n A 1 96 PRO 96 137 137 PRO PRO X . n A 1 97 GLY 97 138 138 GLY GLY X . n A 1 98 VAL 98 139 139 VAL VAL X . n A 1 99 LEU 99 140 140 LEU LEU X . n A 1 100 SER 100 141 141 SER SER X . n A 1 101 MET 101 142 142 MET MET X . n A 1 102 ALA 102 143 143 ALA ALA X . n A 1 103 ASN 103 144 144 ASN ASN X . n A 1 104 ALA 104 145 145 ALA ALA X . n A 1 105 GLY 105 146 146 GLY GLY X . n A 1 106 PRO 106 147 147 PRO PRO X . n A 1 107 ASN 107 148 148 ASN ASN X . n A 1 108 THR 108 149 149 THR THR X . n A 1 109 ASN 109 150 150 ASN ASN X . n A 1 110 GLY 110 151 151 GLY GLY X . n A 1 111 SER 111 152 152 SER SER X . n A 1 112 GLN 112 153 153 GLN GLN X . n A 1 113 PHE 113 154 154 PHE PHE X . n A 1 114 PHE 114 155 155 PHE PHE X . n A 1 115 ILE 115 156 156 ILE ILE X . n A 1 116 CYS 116 157 157 CYS CYS X . n A 1 117 THR 117 158 158 THR THR X . n A 1 118 ILE 118 159 159 ILE ILE X . n A 1 119 LYS 119 1 1 LYS LYS X . n A 1 120 THR 120 161 161 THR THR X . n A 1 121 ASP 121 162 162 ASP ASP X . n A 1 122 TRP 122 163 163 TRP TRP X . n A 1 123 LEU 123 164 164 LEU LEU X . n A 1 124 ASP 124 165 165 ASP ASP X . n A 1 125 GLY 125 166 166 GLY GLY X . n A 1 126 LYS 126 167 167 LYS LYS X . n A 1 127 HIS 127 168 168 HIS HIS X . n A 1 128 VAL 128 169 169 VAL VAL X . n A 1 129 VAL 129 170 170 VAL VAL X . n A 1 130 PHE 130 171 171 PHE PHE X . n A 1 131 GLY 131 172 172 GLY GLY X . n A 1 132 HIS 132 173 173 HIS HIS X . n A 1 133 VAL 133 174 174 VAL VAL X . n A 1 134 ILE 134 175 175 ILE ILE X . n A 1 135 GLU 135 176 176 GLU GLU X . n A 1 136 GLY 136 177 177 GLY GLY X . n A 1 137 MET 137 178 178 MET MET X . n A 1 138 ASP 138 179 179 ASP ASP X . n A 1 139 VAL 139 180 180 VAL VAL X . n A 1 140 VAL 140 181 181 VAL VAL X . n A 1 141 LYS 141 182 182 LYS LYS X . n A 1 142 LYS 142 183 183 LYS LYS X . n A 1 143 ILE 143 184 184 ILE ILE X . n A 1 144 GLU 144 185 185 GLU GLU X . n A 1 145 SER 145 186 186 SER SER X . n A 1 146 PHE 146 187 187 PHE PHE X . n A 1 147 GLY 147 188 188 GLY GLY X . n A 1 148 SER 148 189 189 SER SER X . n A 1 149 LYS 149 190 190 LYS LYS X . n A 1 150 SER 150 191 191 SER SER X . n A 1 151 GLY 151 192 192 GLY GLY X . n A 1 152 ARG 152 193 193 ARG ARG X . n A 1 153 THR 153 194 194 THR THR X . n A 1 154 SER 154 195 195 SER SER X . n A 1 155 LYS 155 196 196 LYS LYS X . n A 1 156 LYS 156 197 197 LYS LYS X . n A 1 157 ILE 157 198 198 ILE ILE X . n A 1 158 VAL 158 199 199 VAL VAL X . n A 1 159 ILE 159 200 200 ILE ILE X . n A 1 160 THR 160 201 201 THR THR X . n A 1 161 ASP 161 202 202 ASP ASP X . n A 1 162 CYS 162 203 203 CYS CYS X . n A 1 163 GLY 163 204 204 GLY GLY X . n A 1 164 GLN 164 205 205 GLN GLN X . n A 1 165 LEU 165 206 206 LEU LEU X . n A 1 166 SER 166 207 207 SER SER X . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1FP 1 208 1 1FP 1FP X . C 2 1FP 1 209 1 1FP 1FP X . D 2 1FP 1 210 1 1FP 1FP X . E 2 1FP 1 211 1 1FP 1FP X . F 2 1FP 1 212 1 1FP 1FP X . G 3 HOH 1 2 1 HOH HOH X . G 3 HOH 2 3 2 HOH HOH X . G 3 HOH 3 4 3 HOH HOH X . G 3 HOH 4 5 4 HOH HOH X . G 3 HOH 5 6 5 HOH HOH X . G 3 HOH 6 7 6 HOH HOH X . G 3 HOH 7 8 7 HOH HOH X . G 3 HOH 8 9 8 HOH HOH X . G 3 HOH 9 10 9 HOH HOH X . G 3 HOH 10 11 10 HOH HOH X . G 3 HOH 11 12 11 HOH HOH X . G 3 HOH 12 13 12 HOH HOH X . G 3 HOH 13 14 13 HOH HOH X . G 3 HOH 14 15 14 HOH HOH X . G 3 HOH 15 16 15 HOH HOH X . G 3 HOH 16 17 16 HOH HOH X . G 3 HOH 17 18 17 HOH HOH X . G 3 HOH 18 19 18 HOH HOH X . G 3 HOH 19 20 19 HOH HOH X . G 3 HOH 20 21 20 HOH HOH X . G 3 HOH 21 22 21 HOH HOH X . G 3 HOH 22 23 22 HOH HOH X . G 3 HOH 23 24 23 HOH HOH X . G 3 HOH 24 25 24 HOH HOH X . G 3 HOH 25 27 26 HOH HOH X . G 3 HOH 26 28 27 HOH HOH X . G 3 HOH 27 29 28 HOH HOH X . G 3 HOH 28 30 29 HOH HOH X . G 3 HOH 29 31 30 HOH HOH X . G 3 HOH 30 32 31 HOH HOH X . G 3 HOH 31 33 32 HOH HOH X . G 3 HOH 32 34 33 HOH HOH X . G 3 HOH 33 35 34 HOH HOH X . G 3 HOH 34 36 35 HOH HOH X . G 3 HOH 35 37 36 HOH HOH X . G 3 HOH 36 38 37 HOH HOH X . G 3 HOH 37 39 38 HOH HOH X . G 3 HOH 38 40 39 HOH HOH X . G 3 HOH 39 41 40 HOH HOH X . G 3 HOH 40 160 159 HOH HOH X . G 3 HOH 41 213 212 HOH HOH X . G 3 HOH 42 214 213 HOH HOH X . G 3 HOH 43 215 1 HOH HOH X . G 3 HOH 44 216 215 HOH HOH X . G 3 HOH 45 217 216 HOH HOH X . G 3 HOH 46 218 41 HOH HOH X . G 3 HOH 47 219 42 HOH HOH X . G 3 HOH 48 220 219 HOH HOH X . G 3 HOH 49 221 220 HOH HOH X . G 3 HOH 50 222 221 HOH HOH X . G 3 HOH 51 223 222 HOH HOH X . G 3 HOH 52 224 223 HOH HOH X . G 3 HOH 53 225 224 HOH HOH X . G 3 HOH 54 226 43 HOH HOH X . G 3 HOH 55 227 226 HOH HOH X . G 3 HOH 56 228 227 HOH HOH X . G 3 HOH 57 229 228 HOH HOH X . G 3 HOH 58 230 229 HOH HOH X . G 3 HOH 59 231 230 HOH HOH X . G 3 HOH 60 232 231 HOH HOH X . G 3 HOH 61 233 232 HOH HOH X . G 3 HOH 62 234 233 HOH HOH X . G 3 HOH 63 235 234 HOH HOH X . G 3 HOH 64 236 235 HOH HOH X . G 3 HOH 65 237 236 HOH HOH X . G 3 HOH 66 238 237 HOH HOH X . G 3 HOH 67 239 238 HOH HOH X . G 3 HOH 68 240 239 HOH HOH X . G 3 HOH 69 241 240 HOH HOH X . G 3 HOH 70 242 241 HOH HOH X . G 3 HOH 71 243 242 HOH HOH X . G 3 HOH 72 244 243 HOH HOH X . G 3 HOH 73 245 244 HOH HOH X . G 3 HOH 74 246 245 HOH HOH X . G 3 HOH 75 247 246 HOH HOH X . G 3 HOH 76 248 247 HOH HOH X . G 3 HOH 77 249 248 HOH HOH X . G 3 HOH 78 250 249 HOH HOH X . G 3 HOH 79 251 250 HOH HOH X . G 3 HOH 80 252 44 HOH HOH X . G 3 HOH 81 253 45 HOH HOH X . G 3 HOH 82 254 46 HOH HOH X . G 3 HOH 83 255 47 HOH HOH X . G 3 HOH 84 256 48 HOH HOH X . G 3 HOH 85 257 49 HOH HOH X . G 3 HOH 86 258 50 HOH HOH X . G 3 HOH 87 259 51 HOH HOH X . G 3 HOH 88 260 52 HOH HOH X . G 3 HOH 89 261 53 HOH HOH X . G 3 HOH 90 262 54 HOH HOH X . G 3 HOH 91 263 55 HOH HOH X . G 3 HOH 92 264 57 HOH HOH X . G 3 HOH 93 265 58 HOH HOH X . G 3 HOH 94 266 59 HOH HOH X . G 3 HOH 95 267 60 HOH HOH X . G 3 HOH 96 268 61 HOH HOH X . G 3 HOH 97 269 62 HOH HOH X . G 3 HOH 98 270 63 HOH HOH X . G 3 HOH 99 271 64 HOH HOH X . G 3 HOH 100 272 65 HOH HOH X . G 3 HOH 101 273 66 HOH HOH X . G 3 HOH 102 274 67 HOH HOH X . G 3 HOH 103 275 68 HOH HOH X . G 3 HOH 104 276 69 HOH HOH X . G 3 HOH 105 277 70 HOH HOH X . G 3 HOH 106 278 71 HOH HOH X . G 3 HOH 107 279 72 HOH HOH X . G 3 HOH 108 280 73 HOH HOH X . G 3 HOH 109 281 75 HOH HOH X . G 3 HOH 110 282 76 HOH HOH X . G 3 HOH 111 283 77 HOH HOH X . G 3 HOH 112 284 79 HOH HOH X . G 3 HOH 113 285 80 HOH HOH X . G 3 HOH 114 286 81 HOH HOH X . G 3 HOH 115 287 82 HOH HOH X . G 3 HOH 116 288 83 HOH HOH X . G 3 HOH 117 289 84 HOH HOH X . G 3 HOH 118 290 85 HOH HOH X . G 3 HOH 119 291 86 HOH HOH X . G 3 HOH 120 292 87 HOH HOH X . G 3 HOH 121 293 88 HOH HOH X . G 3 HOH 122 294 89 HOH HOH X . G 3 HOH 123 295 90 HOH HOH X . G 3 HOH 124 296 91 HOH HOH X . G 3 HOH 125 297 92 HOH HOH X . G 3 HOH 126 298 93 HOH HOH X . G 3 HOH 127 299 94 HOH HOH X . G 3 HOH 128 300 95 HOH HOH X . G 3 HOH 129 301 96 HOH HOH X . G 3 HOH 130 302 98 HOH HOH X . G 3 HOH 131 303 99 HOH HOH X . G 3 HOH 132 304 100 HOH HOH X . G 3 HOH 133 305 101 HOH HOH X . G 3 HOH 134 306 102 HOH HOH X . G 3 HOH 135 307 104 HOH HOH X . G 3 HOH 136 308 105 HOH HOH X . G 3 HOH 137 309 106 HOH HOH X . G 3 HOH 138 310 107 HOH HOH X . G 3 HOH 139 311 108 HOH HOH X . G 3 HOH 140 312 109 HOH HOH X . G 3 HOH 141 313 110 HOH HOH X . G 3 HOH 142 314 111 HOH HOH X . G 3 HOH 143 315 112 HOH HOH X . G 3 HOH 144 316 113 HOH HOH X . G 3 HOH 145 317 114 HOH HOH X . G 3 HOH 146 318 115 HOH HOH X . G 3 HOH 147 319 116 HOH HOH X . G 3 HOH 148 320 117 HOH HOH X . G 3 HOH 149 321 119 HOH HOH X . G 3 HOH 150 322 120 HOH HOH X . G 3 HOH 151 323 121 HOH HOH X . G 3 HOH 152 324 122 HOH HOH X . G 3 HOH 153 325 123 HOH HOH X . G 3 HOH 154 326 124 HOH HOH X . G 3 HOH 155 327 125 HOH HOH X . G 3 HOH 156 328 126 HOH HOH X . G 3 HOH 157 329 127 HOH HOH X . G 3 HOH 158 330 128 HOH HOH X . G 3 HOH 159 331 129 HOH HOH X . G 3 HOH 160 332 130 HOH HOH X . G 3 HOH 161 333 131 HOH HOH X . G 3 HOH 162 334 132 HOH HOH X . G 3 HOH 163 335 133 HOH HOH X . G 3 HOH 164 336 134 HOH HOH X . G 3 HOH 165 337 135 HOH HOH X . G 3 HOH 166 338 136 HOH HOH X . G 3 HOH 167 339 137 HOH HOH X . G 3 HOH 168 340 138 HOH HOH X . G 3 HOH 169 341 141 HOH HOH X . G 3 HOH 170 342 142 HOH HOH X . G 3 HOH 171 343 143 HOH HOH X . G 3 HOH 172 344 144 HOH HOH X . G 3 HOH 173 345 145 HOH HOH X . G 3 HOH 174 346 146 HOH HOH X . G 3 HOH 175 347 147 HOH HOH X . G 3 HOH 176 348 148 HOH HOH X . G 3 HOH 177 349 149 HOH HOH X . G 3 HOH 178 350 150 HOH HOH X . G 3 HOH 179 351 151 HOH HOH X . G 3 HOH 180 352 152 HOH HOH X . G 3 HOH 181 353 153 HOH HOH X . G 3 HOH 182 354 154 HOH HOH X . G 3 HOH 183 355 155 HOH HOH X . G 3 HOH 184 356 156 HOH HOH X . G 3 HOH 185 357 157 HOH HOH X . G 3 HOH 186 358 158 HOH HOH X . G 3 HOH 187 359 160 HOH HOH X . G 3 HOH 188 360 161 HOH HOH X . G 3 HOH 189 361 162 HOH HOH X . G 3 HOH 190 362 163 HOH HOH X . G 3 HOH 191 363 164 HOH HOH X . G 3 HOH 192 364 165 HOH HOH X . G 3 HOH 193 365 166 HOH HOH X . G 3 HOH 194 366 167 HOH HOH X . G 3 HOH 195 367 168 HOH HOH X . G 3 HOH 196 368 169 HOH HOH X . G 3 HOH 197 369 170 HOH HOH X . G 3 HOH 198 370 171 HOH HOH X . G 3 HOH 199 371 172 HOH HOH X . G 3 HOH 200 372 173 HOH HOH X . G 3 HOH 201 373 174 HOH HOH X . G 3 HOH 202 374 175 HOH HOH X . G 3 HOH 203 375 176 HOH HOH X . G 3 HOH 204 376 177 HOH HOH X . G 3 HOH 205 377 178 HOH HOH X . G 3 HOH 206 378 179 HOH HOH X . G 3 HOH 207 379 180 HOH HOH X . G 3 HOH 208 380 181 HOH HOH X . G 3 HOH 209 381 182 HOH HOH X . G 3 HOH 210 382 183 HOH HOH X . G 3 HOH 211 383 184 HOH HOH X . G 3 HOH 212 384 185 HOH HOH X . G 3 HOH 213 385 186 HOH HOH X . G 3 HOH 214 386 188 HOH HOH X . G 3 HOH 215 387 189 HOH HOH X . G 3 HOH 216 388 190 HOH HOH X . G 3 HOH 217 389 191 HOH HOH X . G 3 HOH 218 390 192 HOH HOH X . G 3 HOH 219 391 193 HOH HOH X . G 3 HOH 220 392 194 HOH HOH X . G 3 HOH 221 393 195 HOH HOH X . G 3 HOH 222 394 196 HOH HOH X . G 3 HOH 223 395 197 HOH HOH X . G 3 HOH 224 396 198 HOH HOH X . G 3 HOH 225 397 199 HOH HOH X . G 3 HOH 226 398 200 HOH HOH X . G 3 HOH 227 399 201 HOH HOH X . G 3 HOH 228 400 202 HOH HOH X . G 3 HOH 229 401 204 HOH HOH X . G 3 HOH 230 402 205 HOH HOH X . G 3 HOH 231 403 206 HOH HOH X . G 3 HOH 232 404 208 HOH HOH X . G 3 HOH 233 405 210 HOH HOH X . G 3 HOH 234 406 211 HOH HOH X . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-03-21 2 'Structure model' 1 1 2016-10-19 3 'Structure model' 1 2 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DNA 'data collection' . ? 1 X-PLOR 'model building' . ? 2 REFMAC refinement 5.4.0062 ? 3 SCALA 'data scaling' . ? 4 X-PLOR phasing . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE X 102 ? ? -147.37 -75.13 2 1 THR X 161 ? ? -112.82 65.84 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 X LYS 167 ? NZ ? A LYS 126 NZ 2 1 Y 1 X LYS 190 ? CD ? A LYS 149 CD 3 1 Y 1 X LYS 190 ? CE ? A LYS 149 CE 4 1 Y 1 X LYS 190 ? NZ ? A LYS 149 NZ 5 1 Y 1 X ARG 193 ? CD ? A ARG 152 CD 6 1 Y 1 X ARG 193 ? NE ? A ARG 152 NE 7 1 Y 1 X ARG 193 ? CZ ? A ARG 152 CZ 8 1 Y 1 X ARG 193 ? NH1 ? A ARG 152 NH1 9 1 Y 1 X ARG 193 ? NH2 ? A ARG 152 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 X MET 42 ? A MET 1 2 1 Y 1 X SER 43 ? A SER 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 1FP OAA O N N 1 1FP CAB C N N 2 1FP CAC C N N 3 1FP CAD C N N 4 1FP CAE C N N 5 1FP CAF C N N 6 1FP NAG N N N 7 1FP NAH N N N 8 1FP HAB H N N 9 1FP HAC H N N 10 1FP HACA H N N 11 1FP HAD H N N 12 1FP HADA H N N 13 1FP HAE H N N 14 1FP HAEA H N N 15 1FP HAF H N N 16 1FP HAFA H N N 17 1FP HNAG H N N 18 ALA N N N N 19 ALA CA C N S 20 ALA C C N N 21 ALA O O N N 22 ALA CB C N N 23 ALA OXT O N N 24 ALA H H N N 25 ALA H2 H N N 26 ALA HA H N N 27 ALA HB1 H N N 28 ALA HB2 H N N 29 ALA HB3 H N N 30 ALA HXT H N N 31 ARG N N N N 32 ARG CA C N S 33 ARG C C N N 34 ARG O O N N 35 ARG CB C N N 36 ARG CG C N N 37 ARG CD C N N 38 ARG NE N N N 39 ARG CZ C N N 40 ARG NH1 N N N 41 ARG NH2 N N N 42 ARG OXT O N N 43 ARG H H N N 44 ARG H2 H N N 45 ARG HA H N N 46 ARG HB2 H N N 47 ARG HB3 H N N 48 ARG HG2 H N N 49 ARG HG3 H N N 50 ARG HD2 H N N 51 ARG HD3 H N N 52 ARG HE H N N 53 ARG HH11 H N N 54 ARG HH12 H N N 55 ARG HH21 H N N 56 ARG HH22 H N N 57 ARG HXT H N N 58 ASN N N N N 59 ASN CA C N S 60 ASN C C N N 61 ASN O O N N 62 ASN CB C N N 63 ASN CG C N N 64 ASN OD1 O N N 65 ASN ND2 N N N 66 ASN OXT O N N 67 ASN H H N N 68 ASN H2 H N N 69 ASN HA H N N 70 ASN HB2 H N N 71 ASN HB3 H N N 72 ASN HD21 H N N 73 ASN HD22 H N N 74 ASN HXT H N N 75 ASP N N N N 76 ASP CA C N S 77 ASP C C N N 78 ASP O O N N 79 ASP CB C N N 80 ASP CG C N N 81 ASP OD1 O N N 82 ASP OD2 O N N 83 ASP OXT O N N 84 ASP H H N N 85 ASP H2 H N N 86 ASP HA H N N 87 ASP HB2 H N N 88 ASP HB3 H N N 89 ASP HD2 H N N 90 ASP HXT H N N 91 CYS N N N N 92 CYS CA C N R 93 CYS C C N N 94 CYS O O N N 95 CYS CB C N N 96 CYS SG S N N 97 CYS OXT O N N 98 CYS H H N N 99 CYS H2 H N N 100 CYS HA H N N 101 CYS HB2 H N N 102 CYS HB3 H N N 103 CYS HG H N N 104 CYS HXT H N N 105 GLN N N N N 106 GLN CA C N S 107 GLN C C N N 108 GLN O O N N 109 GLN CB C N N 110 GLN CG C N N 111 GLN CD C N N 112 GLN OE1 O N N 113 GLN NE2 N N N 114 GLN OXT O N N 115 GLN H H N N 116 GLN H2 H N N 117 GLN HA H N N 118 GLN HB2 H N N 119 GLN HB3 H N N 120 GLN HG2 H N N 121 GLN HG3 H N N 122 GLN HE21 H N N 123 GLN HE22 H N N 124 GLN HXT H N N 125 GLU N N N N 126 GLU CA C N S 127 GLU C C N N 128 GLU O O N N 129 GLU CB C N N 130 GLU CG C N N 131 GLU CD C N N 132 GLU OE1 O N N 133 GLU OE2 O N N 134 GLU OXT O N N 135 GLU H H N N 136 GLU H2 H N N 137 GLU HA H N N 138 GLU HB2 H N N 139 GLU HB3 H N N 140 GLU HG2 H N N 141 GLU HG3 H N N 142 GLU HE2 H N N 143 GLU HXT H N N 144 GLY N N N N 145 GLY CA C N N 146 GLY C C N N 147 GLY O O N N 148 GLY OXT O N N 149 GLY H H N N 150 GLY H2 H N N 151 GLY HA2 H N N 152 GLY HA3 H N N 153 GLY HXT H N N 154 HIS N N N N 155 HIS CA C N S 156 HIS C C N N 157 HIS O O N N 158 HIS CB C N N 159 HIS CG C Y N 160 HIS ND1 N Y N 161 HIS CD2 C Y N 162 HIS CE1 C Y N 163 HIS NE2 N Y N 164 HIS OXT O N N 165 HIS H H N N 166 HIS H2 H N N 167 HIS HA H N N 168 HIS HB2 H N N 169 HIS HB3 H N N 170 HIS HD1 H N N 171 HIS HD2 H N N 172 HIS HE1 H N N 173 HIS HE2 H N N 174 HIS HXT H N N 175 HOH O O N N 176 HOH H1 H N N 177 HOH H2 H N N 178 ILE N N N N 179 ILE CA C N S 180 ILE C C N N 181 ILE O O N N 182 ILE CB C N S 183 ILE CG1 C N N 184 ILE CG2 C N N 185 ILE CD1 C N N 186 ILE OXT O N N 187 ILE H H N N 188 ILE H2 H N N 189 ILE HA H N N 190 ILE HB H N N 191 ILE HG12 H N N 192 ILE HG13 H N N 193 ILE HG21 H N N 194 ILE HG22 H N N 195 ILE HG23 H N N 196 ILE HD11 H N N 197 ILE HD12 H N N 198 ILE HD13 H N N 199 ILE HXT H N N 200 LEU N N N N 201 LEU CA C N S 202 LEU C C N N 203 LEU O O N N 204 LEU CB C N N 205 LEU CG C N N 206 LEU CD1 C N N 207 LEU CD2 C N N 208 LEU OXT O N N 209 LEU H H N N 210 LEU H2 H N N 211 LEU HA H N N 212 LEU HB2 H N N 213 LEU HB3 H N N 214 LEU HG H N N 215 LEU HD11 H N N 216 LEU HD12 H N N 217 LEU HD13 H N N 218 LEU HD21 H N N 219 LEU HD22 H N N 220 LEU HD23 H N N 221 LEU HXT H N N 222 LYS N N N N 223 LYS CA C N S 224 LYS C C N N 225 LYS O O N N 226 LYS CB C N N 227 LYS CG C N N 228 LYS CD C N N 229 LYS CE C N N 230 LYS NZ N N N 231 LYS OXT O N N 232 LYS H H N N 233 LYS H2 H N N 234 LYS HA H N N 235 LYS HB2 H N N 236 LYS HB3 H N N 237 LYS HG2 H N N 238 LYS HG3 H N N 239 LYS HD2 H N N 240 LYS HD3 H N N 241 LYS HE2 H N N 242 LYS HE3 H N N 243 LYS HZ1 H N N 244 LYS HZ2 H N N 245 LYS HZ3 H N N 246 LYS HXT H N N 247 MET N N N N 248 MET CA C N S 249 MET C C N N 250 MET O O N N 251 MET CB C N N 252 MET CG C N N 253 MET SD S N N 254 MET CE C N N 255 MET OXT O N N 256 MET H H N N 257 MET H2 H N N 258 MET HA H N N 259 MET HB2 H N N 260 MET HB3 H N N 261 MET HG2 H N N 262 MET HG3 H N N 263 MET HE1 H N N 264 MET HE2 H N N 265 MET HE3 H N N 266 MET HXT H N N 267 PHE N N N N 268 PHE CA C N S 269 PHE C C N N 270 PHE O O N N 271 PHE CB C N N 272 PHE CG C Y N 273 PHE CD1 C Y N 274 PHE CD2 C Y N 275 PHE CE1 C Y N 276 PHE CE2 C Y N 277 PHE CZ C Y N 278 PHE OXT O N N 279 PHE H H N N 280 PHE H2 H N N 281 PHE HA H N N 282 PHE HB2 H N N 283 PHE HB3 H N N 284 PHE HD1 H N N 285 PHE HD2 H N N 286 PHE HE1 H N N 287 PHE HE2 H N N 288 PHE HZ H N N 289 PHE HXT H N N 290 PRO N N N N 291 PRO CA C N S 292 PRO C C N N 293 PRO O O N N 294 PRO CB C N N 295 PRO CG C N N 296 PRO CD C N N 297 PRO OXT O N N 298 PRO H H N N 299 PRO HA H N N 300 PRO HB2 H N N 301 PRO HB3 H N N 302 PRO HG2 H N N 303 PRO HG3 H N N 304 PRO HD2 H N N 305 PRO HD3 H N N 306 PRO HXT H N N 307 SER N N N N 308 SER CA C N S 309 SER C C N N 310 SER O O N N 311 SER CB C N N 312 SER OG O N N 313 SER OXT O N N 314 SER H H N N 315 SER H2 H N N 316 SER HA H N N 317 SER HB2 H N N 318 SER HB3 H N N 319 SER HG H N N 320 SER HXT H N N 321 THR N N N N 322 THR CA C N S 323 THR C C N N 324 THR O O N N 325 THR CB C N R 326 THR OG1 O N N 327 THR CG2 C N N 328 THR OXT O N N 329 THR H H N N 330 THR H2 H N N 331 THR HA H N N 332 THR HB H N N 333 THR HG1 H N N 334 THR HG21 H N N 335 THR HG22 H N N 336 THR HG23 H N N 337 THR HXT H N N 338 TRP N N N N 339 TRP CA C N S 340 TRP C C N N 341 TRP O O N N 342 TRP CB C N N 343 TRP CG C Y N 344 TRP CD1 C Y N 345 TRP CD2 C Y N 346 TRP NE1 N Y N 347 TRP CE2 C Y N 348 TRP CE3 C Y N 349 TRP CZ2 C Y N 350 TRP CZ3 C Y N 351 TRP CH2 C Y N 352 TRP OXT O N N 353 TRP H H N N 354 TRP H2 H N N 355 TRP HA H N N 356 TRP HB2 H N N 357 TRP HB3 H N N 358 TRP HD1 H N N 359 TRP HE1 H N N 360 TRP HE3 H N N 361 TRP HZ2 H N N 362 TRP HZ3 H N N 363 TRP HH2 H N N 364 TRP HXT H N N 365 TYR N N N N 366 TYR CA C N S 367 TYR C C N N 368 TYR O O N N 369 TYR CB C N N 370 TYR CG C Y N 371 TYR CD1 C Y N 372 TYR CD2 C Y N 373 TYR CE1 C Y N 374 TYR CE2 C Y N 375 TYR CZ C Y N 376 TYR OH O N N 377 TYR OXT O N N 378 TYR H H N N 379 TYR H2 H N N 380 TYR HA H N N 381 TYR HB2 H N N 382 TYR HB3 H N N 383 TYR HD1 H N N 384 TYR HD2 H N N 385 TYR HE1 H N N 386 TYR HE2 H N N 387 TYR HH H N N 388 TYR HXT H N N 389 VAL N N N N 390 VAL CA C N S 391 VAL C C N N 392 VAL O O N N 393 VAL CB C N N 394 VAL CG1 C N N 395 VAL CG2 C N N 396 VAL OXT O N N 397 VAL H H N N 398 VAL H2 H N N 399 VAL HA H N N 400 VAL HB H N N 401 VAL HG11 H N N 402 VAL HG12 H N N 403 VAL HG13 H N N 404 VAL HG21 H N N 405 VAL HG22 H N N 406 VAL HG23 H N N 407 VAL HXT H N N 408 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1FP OAA CAB doub N N 1 1FP CAB NAH sing N N 2 1FP CAC CAE sing N N 3 1FP CAC NAG sing N N 4 1FP CAD CAF sing N N 5 1FP CAD NAG sing N N 6 1FP CAE NAH sing N N 7 1FP CAF NAH sing N N 8 1FP CAB HAB sing N N 9 1FP CAC HAC sing N N 10 1FP CAC HACA sing N N 11 1FP CAD HAD sing N N 12 1FP CAD HADA sing N N 13 1FP CAE HAE sing N N 14 1FP CAE HAEA sing N N 15 1FP CAF HAF sing N N 16 1FP CAF HAFA sing N N 17 1FP NAG HNAG sing N N 18 ALA N CA sing N N 19 ALA N H sing N N 20 ALA N H2 sing N N 21 ALA CA C sing N N 22 ALA CA CB sing N N 23 ALA CA HA sing N N 24 ALA C O doub N N 25 ALA C OXT sing N N 26 ALA CB HB1 sing N N 27 ALA CB HB2 sing N N 28 ALA CB HB3 sing N N 29 ALA OXT HXT sing N N 30 ARG N CA sing N N 31 ARG N H sing N N 32 ARG N H2 sing N N 33 ARG CA C sing N N 34 ARG CA CB sing N N 35 ARG CA HA sing N N 36 ARG C O doub N N 37 ARG C OXT sing N N 38 ARG CB CG sing N N 39 ARG CB HB2 sing N N 40 ARG CB HB3 sing N N 41 ARG CG CD sing N N 42 ARG CG HG2 sing N N 43 ARG CG HG3 sing N N 44 ARG CD NE sing N N 45 ARG CD HD2 sing N N 46 ARG CD HD3 sing N N 47 ARG NE CZ sing N N 48 ARG NE HE sing N N 49 ARG CZ NH1 sing N N 50 ARG CZ NH2 doub N N 51 ARG NH1 HH11 sing N N 52 ARG NH1 HH12 sing N N 53 ARG NH2 HH21 sing N N 54 ARG NH2 HH22 sing N N 55 ARG OXT HXT sing N N 56 ASN N CA sing N N 57 ASN N H sing N N 58 ASN N H2 sing N N 59 ASN CA C sing N N 60 ASN CA CB sing N N 61 ASN CA HA sing N N 62 ASN C O doub N N 63 ASN C OXT sing N N 64 ASN CB CG sing N N 65 ASN CB HB2 sing N N 66 ASN CB HB3 sing N N 67 ASN CG OD1 doub N N 68 ASN CG ND2 sing N N 69 ASN ND2 HD21 sing N N 70 ASN ND2 HD22 sing N N 71 ASN OXT HXT sing N N 72 ASP N CA sing N N 73 ASP N H sing N N 74 ASP N H2 sing N N 75 ASP CA C sing N N 76 ASP CA CB sing N N 77 ASP CA HA sing N N 78 ASP C O doub N N 79 ASP C OXT sing N N 80 ASP CB CG sing N N 81 ASP CB HB2 sing N N 82 ASP CB HB3 sing N N 83 ASP CG OD1 doub N N 84 ASP CG OD2 sing N N 85 ASP OD2 HD2 sing N N 86 ASP OXT HXT sing N N 87 CYS N CA sing N N 88 CYS N H sing N N 89 CYS N H2 sing N N 90 CYS CA C sing N N 91 CYS CA CB sing N N 92 CYS CA HA sing N N 93 CYS C O doub N N 94 CYS C OXT sing N N 95 CYS CB SG sing N N 96 CYS CB HB2 sing N N 97 CYS CB HB3 sing N N 98 CYS SG HG sing N N 99 CYS OXT HXT sing N N 100 GLN N CA sing N N 101 GLN N H sing N N 102 GLN N H2 sing N N 103 GLN CA C sing N N 104 GLN CA CB sing N N 105 GLN CA HA sing N N 106 GLN C O doub N N 107 GLN C OXT sing N N 108 GLN CB CG sing N N 109 GLN CB HB2 sing N N 110 GLN CB HB3 sing N N 111 GLN CG CD sing N N 112 GLN CG HG2 sing N N 113 GLN CG HG3 sing N N 114 GLN CD OE1 doub N N 115 GLN CD NE2 sing N N 116 GLN NE2 HE21 sing N N 117 GLN NE2 HE22 sing N N 118 GLN OXT HXT sing N N 119 GLU N CA sing N N 120 GLU N H sing N N 121 GLU N H2 sing N N 122 GLU CA C sing N N 123 GLU CA CB sing N N 124 GLU CA HA sing N N 125 GLU C O doub N N 126 GLU C OXT sing N N 127 GLU CB CG sing N N 128 GLU CB HB2 sing N N 129 GLU CB HB3 sing N N 130 GLU CG CD sing N N 131 GLU CG HG2 sing N N 132 GLU CG HG3 sing N N 133 GLU CD OE1 doub N N 134 GLU CD OE2 sing N N 135 GLU OE2 HE2 sing N N 136 GLU OXT HXT sing N N 137 GLY N CA sing N N 138 GLY N H sing N N 139 GLY N H2 sing N N 140 GLY CA C sing N N 141 GLY CA HA2 sing N N 142 GLY CA HA3 sing N N 143 GLY C O doub N N 144 GLY C OXT sing N N 145 GLY OXT HXT sing N N 146 HIS N CA sing N N 147 HIS N H sing N N 148 HIS N H2 sing N N 149 HIS CA C sing N N 150 HIS CA CB sing N N 151 HIS CA HA sing N N 152 HIS C O doub N N 153 HIS C OXT sing N N 154 HIS CB CG sing N N 155 HIS CB HB2 sing N N 156 HIS CB HB3 sing N N 157 HIS CG ND1 sing Y N 158 HIS CG CD2 doub Y N 159 HIS ND1 CE1 doub Y N 160 HIS ND1 HD1 sing N N 161 HIS CD2 NE2 sing Y N 162 HIS CD2 HD2 sing N N 163 HIS CE1 NE2 sing Y N 164 HIS CE1 HE1 sing N N 165 HIS NE2 HE2 sing N N 166 HIS OXT HXT sing N N 167 HOH O H1 sing N N 168 HOH O H2 sing N N 169 ILE N CA sing N N 170 ILE N H sing N N 171 ILE N H2 sing N N 172 ILE CA C sing N N 173 ILE CA CB sing N N 174 ILE CA HA sing N N 175 ILE C O doub N N 176 ILE C OXT sing N N 177 ILE CB CG1 sing N N 178 ILE CB CG2 sing N N 179 ILE CB HB sing N N 180 ILE CG1 CD1 sing N N 181 ILE CG1 HG12 sing N N 182 ILE CG1 HG13 sing N N 183 ILE CG2 HG21 sing N N 184 ILE CG2 HG22 sing N N 185 ILE CG2 HG23 sing N N 186 ILE CD1 HD11 sing N N 187 ILE CD1 HD12 sing N N 188 ILE CD1 HD13 sing N N 189 ILE OXT HXT sing N N 190 LEU N CA sing N N 191 LEU N H sing N N 192 LEU N H2 sing N N 193 LEU CA C sing N N 194 LEU CA CB sing N N 195 LEU CA HA sing N N 196 LEU C O doub N N 197 LEU C OXT sing N N 198 LEU CB CG sing N N 199 LEU CB HB2 sing N N 200 LEU CB HB3 sing N N 201 LEU CG CD1 sing N N 202 LEU CG CD2 sing N N 203 LEU CG HG sing N N 204 LEU CD1 HD11 sing N N 205 LEU CD1 HD12 sing N N 206 LEU CD1 HD13 sing N N 207 LEU CD2 HD21 sing N N 208 LEU CD2 HD22 sing N N 209 LEU CD2 HD23 sing N N 210 LEU OXT HXT sing N N 211 LYS N CA sing N N 212 LYS N H sing N N 213 LYS N H2 sing N N 214 LYS CA C sing N N 215 LYS CA CB sing N N 216 LYS CA HA sing N N 217 LYS C O doub N N 218 LYS C OXT sing N N 219 LYS CB CG sing N N 220 LYS CB HB2 sing N N 221 LYS CB HB3 sing N N 222 LYS CG CD sing N N 223 LYS CG HG2 sing N N 224 LYS CG HG3 sing N N 225 LYS CD CE sing N N 226 LYS CD HD2 sing N N 227 LYS CD HD3 sing N N 228 LYS CE NZ sing N N 229 LYS CE HE2 sing N N 230 LYS CE HE3 sing N N 231 LYS NZ HZ1 sing N N 232 LYS NZ HZ2 sing N N 233 LYS NZ HZ3 sing N N 234 LYS OXT HXT sing N N 235 MET N CA sing N N 236 MET N H sing N N 237 MET N H2 sing N N 238 MET CA C sing N N 239 MET CA CB sing N N 240 MET CA HA sing N N 241 MET C O doub N N 242 MET C OXT sing N N 243 MET CB CG sing N N 244 MET CB HB2 sing N N 245 MET CB HB3 sing N N 246 MET CG SD sing N N 247 MET CG HG2 sing N N 248 MET CG HG3 sing N N 249 MET SD CE sing N N 250 MET CE HE1 sing N N 251 MET CE HE2 sing N N 252 MET CE HE3 sing N N 253 MET OXT HXT sing N N 254 PHE N CA sing N N 255 PHE N H sing N N 256 PHE N H2 sing N N 257 PHE CA C sing N N 258 PHE CA CB sing N N 259 PHE CA HA sing N N 260 PHE C O doub N N 261 PHE C OXT sing N N 262 PHE CB CG sing N N 263 PHE CB HB2 sing N N 264 PHE CB HB3 sing N N 265 PHE CG CD1 doub Y N 266 PHE CG CD2 sing Y N 267 PHE CD1 CE1 sing Y N 268 PHE CD1 HD1 sing N N 269 PHE CD2 CE2 doub Y N 270 PHE CD2 HD2 sing N N 271 PHE CE1 CZ doub Y N 272 PHE CE1 HE1 sing N N 273 PHE CE2 CZ sing Y N 274 PHE CE2 HE2 sing N N 275 PHE CZ HZ sing N N 276 PHE OXT HXT sing N N 277 PRO N CA sing N N 278 PRO N CD sing N N 279 PRO N H sing N N 280 PRO CA C sing N N 281 PRO CA CB sing N N 282 PRO CA HA sing N N 283 PRO C O doub N N 284 PRO C OXT sing N N 285 PRO CB CG sing N N 286 PRO CB HB2 sing N N 287 PRO CB HB3 sing N N 288 PRO CG CD sing N N 289 PRO CG HG2 sing N N 290 PRO CG HG3 sing N N 291 PRO CD HD2 sing N N 292 PRO CD HD3 sing N N 293 PRO OXT HXT sing N N 294 SER N CA sing N N 295 SER N H sing N N 296 SER N H2 sing N N 297 SER CA C sing N N 298 SER CA CB sing N N 299 SER CA HA sing N N 300 SER C O doub N N 301 SER C OXT sing N N 302 SER CB OG sing N N 303 SER CB HB2 sing N N 304 SER CB HB3 sing N N 305 SER OG HG sing N N 306 SER OXT HXT sing N N 307 THR N CA sing N N 308 THR N H sing N N 309 THR N H2 sing N N 310 THR CA C sing N N 311 THR CA CB sing N N 312 THR CA HA sing N N 313 THR C O doub N N 314 THR C OXT sing N N 315 THR CB OG1 sing N N 316 THR CB CG2 sing N N 317 THR CB HB sing N N 318 THR OG1 HG1 sing N N 319 THR CG2 HG21 sing N N 320 THR CG2 HG22 sing N N 321 THR CG2 HG23 sing N N 322 THR OXT HXT sing N N 323 TRP N CA sing N N 324 TRP N H sing N N 325 TRP N H2 sing N N 326 TRP CA C sing N N 327 TRP CA CB sing N N 328 TRP CA HA sing N N 329 TRP C O doub N N 330 TRP C OXT sing N N 331 TRP CB CG sing N N 332 TRP CB HB2 sing N N 333 TRP CB HB3 sing N N 334 TRP CG CD1 doub Y N 335 TRP CG CD2 sing Y N 336 TRP CD1 NE1 sing Y N 337 TRP CD1 HD1 sing N N 338 TRP CD2 CE2 doub Y N 339 TRP CD2 CE3 sing Y N 340 TRP NE1 CE2 sing Y N 341 TRP NE1 HE1 sing N N 342 TRP CE2 CZ2 sing Y N 343 TRP CE3 CZ3 doub Y N 344 TRP CE3 HE3 sing N N 345 TRP CZ2 CH2 doub Y N 346 TRP CZ2 HZ2 sing N N 347 TRP CZ3 CH2 sing Y N 348 TRP CZ3 HZ3 sing N N 349 TRP CH2 HH2 sing N N 350 TRP OXT HXT sing N N 351 TYR N CA sing N N 352 TYR N H sing N N 353 TYR N H2 sing N N 354 TYR CA C sing N N 355 TYR CA CB sing N N 356 TYR CA HA sing N N 357 TYR C O doub N N 358 TYR C OXT sing N N 359 TYR CB CG sing N N 360 TYR CB HB2 sing N N 361 TYR CB HB3 sing N N 362 TYR CG CD1 doub Y N 363 TYR CG CD2 sing Y N 364 TYR CD1 CE1 sing Y N 365 TYR CD1 HD1 sing N N 366 TYR CD2 CE2 doub Y N 367 TYR CD2 HD2 sing N N 368 TYR CE1 CZ doub Y N 369 TYR CE1 HE1 sing N N 370 TYR CE2 CZ sing Y N 371 TYR CE2 HE2 sing N N 372 TYR CZ OH sing N N 373 TYR OH HH sing N N 374 TYR OXT HXT sing N N 375 VAL N CA sing N N 376 VAL N H sing N N 377 VAL N H2 sing N N 378 VAL CA C sing N N 379 VAL CA CB sing N N 380 VAL CA HA sing N N 381 VAL C O doub N N 382 VAL C OXT sing N N 383 VAL CB CG1 sing N N 384 VAL CB CG2 sing N N 385 VAL CB HB sing N N 386 VAL CG1 HG11 sing N N 387 VAL CG1 HG12 sing N N 388 VAL CG1 HG13 sing N N 389 VAL CG2 HG21 sing N N 390 VAL CG2 HG22 sing N N 391 VAL CG2 HG23 sing N N 392 VAL OXT HXT sing N N 393 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 piperazine-1-carbaldehyde 1FP 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2BIT _pdbx_initial_refinement_model.details 'PDB ENTRY 2BIT' #