HEADER IMMUNE SYSTEM 01-APR-11 3RDT TITLE CRYSTAL STRUCTURE OF 809.B5 TCR COMPLEXED WITH MHC CLASS II I-AB/3K TITLE 2 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: H-2 CLASS II HISTOCOMPATIBILITY ANTIGEN, A-B ALPHA CHAIN; COMPND 3 CHAIN: C; COMPND 4 FRAGMENT: UNP RESIDUES 27-208; COMPND 5 SYNONYM: IAALPHA; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: 3K PEPTIDE, LINKER AND MHC H-2 CLASS II I-AB BETA CHAIN; COMPND 9 CHAIN: D; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: TCR 809.B5 ALPHA CHAIN; COMPND 13 CHAIN: A; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 4; COMPND 16 MOLECULE: TCR 809.B5 BETA CHAIN; COMPND 17 CHAIN: B; COMPND 18 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: H2-AA; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT, MUS MUSCULUS; SOURCE 10 ORGANISM_COMMON: MOUSE, ARTIFICIAL GENE; SOURCE 11 ORGANISM_TAXID: 32630, 10090; SOURCE 12 GENE: H2-AB1; SOURCE 13 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 17 ORGANISM_COMMON: MOUSE; SOURCE 18 ORGANISM_TAXID: 10090; SOURCE 19 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 20 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 21 MOL_ID: 4; SOURCE 22 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 23 ORGANISM_COMMON: MOUSE; SOURCE 24 ORGANISM_TAXID: 10090; SOURCE 25 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 26 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MHC, TCR, IMMUNE RECEPTOR, IG-LIKE DOMAIN, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR P.TRENH,E.S.HUSEBY,L.J.STERN REVDAT 5 30-OCT-24 3RDT 1 REMARK REVDAT 4 13-SEP-23 3RDT 1 DBREF SEQADV REVDAT 3 23-AUG-17 3RDT 1 SOURCE REMARK REVDAT 2 08-FEB-12 3RDT 1 JRNL REVDAT 1 07-DEC-11 3RDT 0 JRNL AUTH B.D.STADINSKI,P.TRENH,R.L.SMITH,B.BAUTISTA,P.G.HUSEBY,G.LI, JRNL AUTH 2 L.J.STERN,E.S.HUSEBY JRNL TITL A ROLE FOR DIFFERENTIAL VARIABLE GENE PAIRING IN CREATING T JRNL TITL 2 CELL RECEPTORS SPECIFIC FOR UNIQUE MAJOR HISTOCOMPATIBILITY JRNL TITL 3 LIGANDS. JRNL REF IMMUNITY V. 35 694 2011 JRNL REFN ISSN 1074-7613 JRNL PMID 22101158 JRNL DOI 10.1016/J.IMMUNI.2011.10.012 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 30618 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1530 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.9814 - 5.8227 0.99 2994 178 0.2150 0.2291 REMARK 3 2 5.8227 - 4.6272 0.99 2920 186 0.1837 0.2015 REMARK 3 3 4.6272 - 4.0438 0.99 2921 162 0.1698 0.2237 REMARK 3 4 4.0438 - 3.6748 0.99 2945 139 0.1968 0.2496 REMARK 3 5 3.6748 - 3.4118 0.99 2918 146 0.1935 0.2254 REMARK 3 6 3.4118 - 3.2109 0.99 2913 143 0.2079 0.2704 REMARK 3 7 3.2109 - 3.0503 0.98 2890 146 0.2317 0.2864 REMARK 3 8 3.0503 - 2.9176 0.98 2897 149 0.2455 0.2651 REMARK 3 9 2.9176 - 2.8054 0.98 2878 131 0.2551 0.3101 REMARK 3 10 2.8054 - 2.7000 0.96 2812 150 0.3002 0.3595 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 37.85 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.74 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -6.23050 REMARK 3 B22 (A**2) : 21.99250 REMARK 3 B33 (A**2) : -15.76200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 4.03730 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 6583 REMARK 3 ANGLE : 1.102 8971 REMARK 3 CHIRALITY : 0.078 974 REMARK 3 PLANARITY : 0.004 1175 REMARK 3 DIHEDRAL : 15.074 2309 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3RDT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-APR-11. REMARK 100 THE DEPOSITION ID IS D_1000064807. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-OCT-10 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1 REMARK 200 MONOCHROMATOR : SILICON REMARK 200 OPTICS : MONOCHROMATOR, MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30664 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : 0.08400 REMARK 200 FOR THE DATA SET : 18.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.54000 REMARK 200 R SYM FOR SHELL (I) : 0.54000 REMARK 200 FOR SHELL : 2.770 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3C60 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% PEG 4000, 100MM SODIUM CITRATE, REMARK 280 100MM SODIUM CACODYLATE, PH 5.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 119.92750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.50800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 119.92750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 36.50800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU C 179 REMARK 465 PRO C 180 REMARK 465 GLU C 181 REMARK 465 GLY D -12 REMARK 465 GLY D -11 REMARK 465 GLY D -10 REMARK 465 GLY D -9 REMARK 465 SER D -8 REMARK 465 LEU D -7 REMARK 465 VAL D -6 REMARK 465 PRO D -5 REMARK 465 ARG D -4 REMARK 465 GLY D -3 REMARK 465 SER D -2 REMARK 465 GLY D -1 REMARK 465 GLY D 0 REMARK 465 GLY D 1 REMARK 465 GLY D 2 REMARK 465 SER D 3 REMARK 465 GLU D 4 REMARK 465 ARG D 5 REMARK 465 MET A 0 REMARK 465 GLN A 1 REMARK 465 PRO A 202 REMARK 465 GLU A 203 REMARK 465 SER A 204 REMARK 465 SER A 205 REMARK 465 MET B 0 REMARK 465 ALA B 239 REMARK 465 ASP B 240 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS C 75 CG CD CE NZ REMARK 470 ASN C 124 CG OD1 ND2 REMARK 470 LYS C 126 CG CD CE NZ REMARK 470 ARG C 141 CG CD NE CZ NH1 NH2 REMARK 470 ILE C 160 CG1 CG2 CD1 REMARK 470 LYS C 176 CG CD CE NZ REMARK 470 GLN D 22 CG CD OE1 NE2 REMARK 470 ARG D 23 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 55 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 59 CG CD OE1 OE2 REMARK 470 ARG D 190 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 2 CG CD OE1 NE2 REMARK 470 ARG A 4 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 8 CG CD OE1 NE2 REMARK 470 GLU A 25 CG CD OE1 OE2 REMARK 470 LYS A 68 CG CD CE NZ REMARK 470 ARG A 69 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 72 CG CD CE NZ REMARK 470 ARG A 124 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 130 CG OD1 OD2 REMARK 470 GLN A 142 CG CD OE1 NE2 REMARK 470 ASN A 144 CG OD1 ND2 REMARK 470 GLN A 147 CG CD OE1 NE2 REMARK 470 LYS A 149 CG CD CE NZ REMARK 470 ARG A 164 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 12 CG1 CG2 REMARK 470 ASN B 22 CG OD1 ND2 REMARK 470 LYS B 63 CG CD CE NZ REMARK 470 GLU B 111 CG CD OE1 OE2 REMARK 470 ASP B 112 CG OD1 OD2 REMARK 470 GLU B 152 CG CD OE1 OE2 REMARK 470 LYS B 160 CG CD CE NZ REMARK 470 ARG B 201 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER C 125 -1.31 75.18 REMARK 500 ALA C 129 17.99 -143.00 REMARK 500 SER D 42 -14.61 -48.26 REMARK 500 VAL D 78 -68.50 -99.75 REMARK 500 THR D 90 -101.69 -132.28 REMARK 500 PRO D 125 -161.29 -75.04 REMARK 500 ASP A 59 83.64 -156.88 REMARK 500 LYS A 71 50.06 39.88 REMARK 500 ALA A 86 -173.03 177.71 REMARK 500 ASP A 117 69.35 -158.56 REMARK 500 SER A 129 -29.66 -36.17 REMARK 500 ASP A 152 -38.77 85.72 REMARK 500 ASP A 167 60.09 -119.75 REMARK 500 ASP A 181 50.89 -100.53 REMARK 500 HIS B 39 -10.79 -153.45 REMARK 500 LEU B 113 -12.09 61.01 REMARK 500 GLN B 135 19.04 59.29 REMARK 500 PRO B 148 -166.44 -72.52 REMARK 500 ASP B 149 38.05 -95.21 REMARK 500 HIS B 163 -37.78 -131.58 REMARK 500 GLN B 176 76.63 -155.96 REMARK 500 ASN B 180 2.40 -69.81 REMARK 500 PHE B 196 -29.93 -147.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3C60 RELATED DB: PDB REMARK 900 THE SAME MHC PROTEIN WITH A DIFFERENT TCR ALPHA CHAIN. CRYSTAL REMARK 900 STRUCTURE OF MOUSE MHC CLASS II I-AB/3K PEPTIDE COMPLEXED WITH REMARK 900 MOUSE TCR YAE62 REMARK 900 RELATED ID: 3C6L RELATED DB: PDB REMARK 900 THE SAME MHC PROTEIN WITH A DIFFERENT TCR. CRYSTAL STRUCTURE OF REMARK 900 MOUSE MHC CLASS II I-AB/3K PEPTIDE COMPLEXED WITH MOUSE TCR 2W20 REMARK 900 RELATED ID: 3C5Z RELATED DB: PDB REMARK 900 THE SAME MHC PROTEIN WITH A DIFFERENT TCR. CRYSTAL STRUCTURE OF REMARK 900 MOUSE MHC CLASS II I-AB/3K PEPTIDE COMPLEXED WITH MOUSE TCR B3K506 REMARK 900 RELATED ID: 1LNU RELATED DB: PDB REMARK 900 THE SAME MHC PROTEIN. CRYSTAL STRUCTURE OF CLASS II MHC MOLECULE REMARK 900 IAB BOUND TO EALPHA3K PEPTIDE DBREF 3RDT C 0 181 UNP P14434 HA2B_MOUSE 27 208 DBREF 3RDT D 3 191 UNP P14483 HB2A_MOUSE 30 218 DBREF 3RDT D -25 -13 PDB 3RDT 3RDT -25 -13 DBREF 3RDT A 1 205 PDB 3RDT 3RDT 1 205 DBREF 3RDT B 0 240 PDB 3RDT 3RDT 0 240 SEQADV 3RDT GLY D -12 UNP P14483 LINKER SEQADV 3RDT GLY D -11 UNP P14483 LINKER SEQADV 3RDT GLY D -10 UNP P14483 LINKER SEQADV 3RDT GLY D -9 UNP P14483 LINKER SEQADV 3RDT SER D -8 UNP P14483 LINKER SEQADV 3RDT LEU D -7 UNP P14483 LINKER SEQADV 3RDT VAL D -6 UNP P14483 LINKER SEQADV 3RDT PRO D -5 UNP P14483 LINKER SEQADV 3RDT ARG D -4 UNP P14483 LINKER SEQADV 3RDT GLY D -3 UNP P14483 LINKER SEQADV 3RDT SER D -2 UNP P14483 LINKER SEQADV 3RDT GLY D -1 UNP P14483 LINKER SEQADV 3RDT GLY D 0 UNP P14483 LINKER SEQADV 3RDT GLY D 1 UNP P14483 LINKER SEQADV 3RDT GLY D 2 UNP P14483 LINKER SEQRES 1 C 182 ILE GLU ALA ASP HIS VAL GLY THR TYR GLY ILE SER VAL SEQRES 2 C 182 TYR GLN SER PRO GLY ASP ILE GLY GLN TYR THR PHE GLU SEQRES 3 C 182 PHE ASP GLY ASP GLU LEU PHE TYR VAL ASP LEU ASP LYS SEQRES 4 C 182 LYS GLU THR VAL TRP MET LEU PRO GLU PHE GLY GLN LEU SEQRES 5 C 182 ALA SER PHE ASP PRO GLN GLY GLY LEU GLN ASN ILE ALA SEQRES 6 C 182 VAL VAL LYS HIS ASN LEU GLY VAL LEU THR LYS ARG SER SEQRES 7 C 182 ASN SER THR PRO ALA THR ASN GLU ALA PRO GLN ALA THR SEQRES 8 C 182 VAL PHE PRO LYS SER PRO VAL LEU LEU GLY GLN PRO ASN SEQRES 9 C 182 THR LEU ILE CYS PHE VAL ASP ASN ILE PHE PRO PRO VAL SEQRES 10 C 182 ILE ASN ILE THR TRP LEU ARG ASN SER LYS SER VAL ALA SEQRES 11 C 182 ASP GLY VAL TYR GLU THR SER PHE PHE VAL ASN ARG ASP SEQRES 12 C 182 TYR SER PHE HIS LYS LEU SER TYR LEU THR PHE ILE PRO SEQRES 13 C 182 SER ASP ASP ASP ILE TYR ASP CYS LYS VAL GLU HIS TRP SEQRES 14 C 182 GLY LEU GLU GLU PRO VAL LEU LYS HIS TRP GLU PRO GLU SEQRES 1 D 217 PHE GLU ALA GLN LYS ALA LYS ALA ASN LYS ALA VAL ASP SEQRES 2 D 217 GLY GLY GLY GLY SER LEU VAL PRO ARG GLY SER GLY GLY SEQRES 3 D 217 GLY GLY SER GLU ARG HIS PHE VAL TYR GLN PHE MET GLY SEQRES 4 D 217 GLU CYS TYR PHE THR ASN GLY THR GLN ARG ILE ARG TYR SEQRES 5 D 217 VAL THR ARG TYR ILE TYR ASN ARG GLU GLU TYR VAL ARG SEQRES 6 D 217 TYR ASP SER ASP VAL GLY GLU HIS ARG ALA VAL THR GLU SEQRES 7 D 217 LEU GLY ARG PRO ASP ALA GLU TYR TRP ASN SER GLN PRO SEQRES 8 D 217 GLU ILE LEU GLU ARG THR ARG ALA GLU LEU ASP THR VAL SEQRES 9 D 217 CYS ARG HIS ASN TYR GLU GLY PRO GLU THR HIS THR SER SEQRES 10 D 217 LEU ARG ARG LEU GLU GLN PRO ASN VAL VAL ILE SER LEU SEQRES 11 D 217 SER ARG THR GLU ALA LEU ASN HIS HIS ASN THR LEU VAL SEQRES 12 D 217 CYS SER VAL THR ASP PHE TYR PRO ALA LYS ILE LYS VAL SEQRES 13 D 217 ARG TRP PHE ARG ASN GLY GLN GLU GLU THR VAL GLY VAL SEQRES 14 D 217 SER SER THR GLN LEU ILE ARG ASN GLY ASP TRP THR PHE SEQRES 15 D 217 GLN VAL LEU VAL MET LEU GLU MET THR PRO ARG ARG GLY SEQRES 16 D 217 GLU VAL TYR THR CYS HIS VAL GLU HIS PRO SER LEU LYS SEQRES 17 D 217 SER PRO ILE THR VAL GLU TRP ARG ALA SEQRES 1 A 205 MET GLN GLN VAL ARG GLN SER PRO GLN SER LEU THR VAL SEQRES 2 A 205 TRP GLU GLY GLU THR ALA ILE LEU ASN CYS SER TYR GLU SEQRES 3 A 205 ASN SER ALA PHE ASP TYR PHE PRO TRP TYR GLN GLN PHE SEQRES 4 A 205 PRO GLY GLU GLY PRO ALA LEU LEU ILE ALA ILE ARG SER SEQRES 5 A 205 VAL SER ASP LYS LYS GLU ASP GLY ARG PHE THR ILE PHE SEQRES 6 A 205 PHE ASN LYS ARG GLU LYS LYS LEU SER LEU HIS ILE THR SEQRES 7 A 205 ASP SER GLN PRO GLY ASP SER ALA THR TYR PHE CYS ALA SEQRES 8 A 205 ALA SER LYS GLY ALA ASP ARG LEU THR PHE GLY LYS GLY SEQRES 9 A 205 THR GLN LEU ILE ILE GLN PRO TYR ILE GLN ASN PRO ASP SEQRES 10 A 205 PRO ALA VAL TYR GLN LEU ARG ASP SER LYS SER SER ASP SEQRES 11 A 205 LYS SER VAL CYS LEU PHE THR ASP PHE ASP SER GLN THR SEQRES 12 A 205 ASN VAL SER GLN SER LYS ASP SER ASP VAL TYR ILE THR SEQRES 13 A 205 ASP LYS CYS VAL LEU ASP MET ARG SER MET ASP PHE LYS SEQRES 14 A 205 SER ASN SER ALA VAL ALA TRP SER ASN LYS SER ASP PHE SEQRES 15 A 205 ALA CYS ALA ASN ALA PHE ASN ASN SER ILE ILE PRO GLU SEQRES 16 A 205 ASP THR PHE PHE PRO SER PRO GLU SER SER SEQRES 1 B 241 MET ALA VAL THR GLN SER PRO ARG ASN LYS VAL ALA VAL SEQRES 2 B 241 THR GLY GLY LYS VAL THR LEU SER CYS ASN GLN THR ASN SEQRES 3 B 241 ASN HIS ASN ASN MET TYR TRP TYR ARG GLN ASP THR GLY SEQRES 4 B 241 HIS GLY LEU ARG LEU ILE HIS TYR SER TYR GLY ALA GLY SEQRES 5 B 241 SER THR GLU LYS GLY ASP ILE PRO ASP GLY TYR LYS ALA SEQRES 6 B 241 SER ARG PRO SER GLN GLU ASN PHE SER LEU ILE LEU GLU SEQRES 7 B 241 LEU ALA THR PRO SER GLN THR SER VAL TYR PHE CYS ALA SEQRES 8 B 241 SER GLY ASP PHE TRP GLY ASP THR LEU TYR PHE GLY ALA SEQRES 9 B 241 GLY THR ARG LEU SER VAL LEU GLU ASP LEU LYS ASN VAL SEQRES 10 B 241 PHE PRO PRO GLU VAL ALA VAL PHE GLU PRO SER GLU ALA SEQRES 11 B 241 GLU ILE SER HIS THR GLN LYS ALA THR LEU VAL CYS LEU SEQRES 12 B 241 ALA THR GLY PHE TYR PRO ASP HIS VAL GLU LEU SER TRP SEQRES 13 B 241 TRP VAL ASN GLY LYS GLU VAL HIS SER GLY VAL CYS THR SEQRES 14 B 241 ASP PRO GLN PRO LEU LYS GLU GLN PRO ALA LEU ASN ASP SEQRES 15 B 241 SER ARG TYR ALA LEU SER SER ARG LEU ARG VAL SER ALA SEQRES 16 B 241 THR PHE TRP GLN ASN PRO ARG ASN HIS PHE ARG CYS GLN SEQRES 17 B 241 VAL GLN PHE TYR GLY LEU SER GLU ASN ASP GLU TRP THR SEQRES 18 B 241 GLN ASP ARG ALA LYS PRO VAL THR GLN ILE VAL SER ALA SEQRES 19 B 241 GLU ALA TRP GLY ARG ALA ASP HELIX 1 1 LEU C 45 GLN C 50 1 6 HELIX 2 2 ASP C 55 SER C 77 1 23 HELIX 3 3 THR D 51 LEU D 53 5 3 HELIX 4 4 GLY D 54 GLN D 64 1 11 HELIX 5 5 GLN D 64 ALA D 73 1 10 HELIX 6 6 ALA D 73 VAL D 78 1 6 HELIX 7 7 VAL D 78 GLY D 85 1 8 HELIX 8 8 PRO D 86 ARG D 94 5 9 HELIX 9 9 GLN A 81 SER A 85 5 5 HELIX 10 10 THR B 80 THR B 84 5 5 HELIX 11 11 SER B 127 GLN B 135 1 9 HELIX 12 12 ALA B 194 GLN B 198 1 5 SHEET 1 A 8 GLU C 40 TRP C 43 0 SHEET 2 A 8 ASP C 29 ASP C 35 -1 N ASP C 35 O GLU C 40 SHEET 3 A 8 ILE C 19 PHE C 26 -1 N PHE C 26 O ASP C 29 SHEET 4 A 8 HIS C 4 SER C 15 -1 N GLN C 14 O ILE C 19 SHEET 5 A 8 PHE D 7 THR D 18 -1 O PHE D 11 N SER C 11 SHEET 6 A 8 ARG D 23 TYR D 32 -1 O VAL D 27 N GLU D 14 SHEET 7 A 8 GLU D 35 ASP D 41 -1 O TYR D 40 N THR D 28 SHEET 8 A 8 HIS D 47 ALA D 49 -1 O ARG D 48 N ARG D 39 SHEET 1 B 4 GLN C 88 PRO C 93 0 SHEET 2 B 4 ASN C 103 ILE C 112 -1 O ASP C 110 N GLN C 88 SHEET 3 B 4 PHE C 145 PHE C 153 -1 O LYS C 147 N VAL C 109 SHEET 4 B 4 TYR C 133 GLU C 134 -1 N TYR C 133 O TYR C 150 SHEET 1 C 4 GLN C 88 PRO C 93 0 SHEET 2 C 4 ASN C 103 ILE C 112 -1 O ASP C 110 N GLN C 88 SHEET 3 C 4 PHE C 145 PHE C 153 -1 O LYS C 147 N VAL C 109 SHEET 4 C 4 PHE C 138 VAL C 139 -1 N PHE C 138 O HIS C 146 SHEET 1 D 4 LYS C 126 VAL C 128 0 SHEET 2 D 4 ASN C 118 ARG C 123 -1 N ARG C 123 O LYS C 126 SHEET 3 D 4 TYR C 161 GLU C 166 -1 O GLU C 166 N ASN C 118 SHEET 4 D 4 VAL C 174 TRP C 178 -1 O VAL C 174 N VAL C 165 SHEET 1 E 4 ASN D 99 LEU D 104 0 SHEET 2 E 4 ASN D 114 PHE D 123 -1 O THR D 121 N ASN D 99 SHEET 3 E 4 PHE D 156 MET D 164 -1 O LEU D 162 N LEU D 116 SHEET 4 E 4 VAL D 143 SER D 145 -1 N SER D 144 O MET D 161 SHEET 1 F 4 ASN D 99 LEU D 104 0 SHEET 2 F 4 ASN D 114 PHE D 123 -1 O THR D 121 N ASN D 99 SHEET 3 F 4 PHE D 156 MET D 164 -1 O LEU D 162 N LEU D 116 SHEET 4 F 4 ILE D 149 ARG D 150 -1 N ILE D 149 O GLN D 157 SHEET 1 G 4 GLN D 137 GLU D 138 0 SHEET 2 G 4 LYS D 129 ARG D 134 -1 N ARG D 134 O GLN D 137 SHEET 3 G 4 VAL D 171 GLU D 177 -1 O HIS D 175 N ARG D 131 SHEET 4 G 4 ILE D 185 ARG D 190 -1 O TRP D 189 N TYR D 172 SHEET 1 H 5 VAL A 3 SER A 6 0 SHEET 2 H 5 ALA A 18 TYR A 24 -1 O SER A 23 N ARG A 4 SHEET 3 H 5 LYS A 72 ILE A 77 -1 O ILE A 77 N ALA A 18 SHEET 4 H 5 PHE A 62 ASN A 67 -1 N THR A 63 O HIS A 76 SHEET 5 H 5 LYS A 56 ASP A 59 -1 N ASP A 59 O PHE A 62 SHEET 1 I 5 SER A 9 TRP A 13 0 SHEET 2 I 5 THR A 105 GLN A 110 1 O GLN A 110 N VAL A 12 SHEET 3 I 5 ALA A 86 ALA A 92 -1 N ALA A 86 O LEU A 107 SHEET 4 I 5 TYR A 31 GLN A 37 -1 N GLN A 37 O THR A 87 SHEET 5 I 5 ALA A 44 ARG A 50 -1 O ILE A 49 N PHE A 32 SHEET 1 J 4 SER A 9 TRP A 13 0 SHEET 2 J 4 THR A 105 GLN A 110 1 O GLN A 110 N VAL A 12 SHEET 3 J 4 ALA A 86 ALA A 92 -1 N ALA A 86 O LEU A 107 SHEET 4 J 4 THR A 100 PHE A 101 -1 O THR A 100 N ALA A 92 SHEET 1 K 8 VAL A 153 ILE A 155 0 SHEET 2 K 8 PHE A 168 SER A 177 -1 O TRP A 176 N TYR A 154 SHEET 3 K 8 SER A 132 THR A 137 -1 N CYS A 134 O ALA A 175 SHEET 4 K 8 ALA A 119 ASP A 125 -1 N TYR A 121 O LEU A 135 SHEET 5 K 8 GLU B 120 GLU B 125 -1 O GLU B 125 N ARG A 124 SHEET 6 K 8 LYS B 136 PHE B 146 -1 O LEU B 142 N ALA B 122 SHEET 7 K 8 TYR B 184 SER B 193 -1 O LEU B 190 N LEU B 139 SHEET 8 K 8 VAL B 166 THR B 168 -1 N CYS B 167 O ARG B 189 SHEET 1 L 8 CYS A 159 MET A 163 0 SHEET 2 L 8 PHE A 168 SER A 177 -1 O PHE A 168 N MET A 163 SHEET 3 L 8 SER A 132 THR A 137 -1 N CYS A 134 O ALA A 175 SHEET 4 L 8 ALA A 119 ASP A 125 -1 N TYR A 121 O LEU A 135 SHEET 5 L 8 GLU B 120 GLU B 125 -1 O GLU B 125 N ARG A 124 SHEET 6 L 8 LYS B 136 PHE B 146 -1 O LEU B 142 N ALA B 122 SHEET 7 L 8 TYR B 184 SER B 193 -1 O LEU B 190 N LEU B 139 SHEET 8 L 8 LEU B 173 LYS B 174 -1 N LEU B 173 O ALA B 185 SHEET 1 M 4 VAL B 2 SER B 5 0 SHEET 2 M 4 VAL B 17 GLN B 23 -1 O ASN B 22 N THR B 3 SHEET 3 M 4 SER B 73 LEU B 76 -1 O LEU B 76 N VAL B 17 SHEET 4 M 4 LYS B 63 SER B 65 -1 N LYS B 63 O ILE B 75 SHEET 1 N 6 ASN B 8 VAL B 12 0 SHEET 2 N 6 THR B 105 LEU B 110 1 O LEU B 110 N ALA B 11 SHEET 3 N 6 SER B 85 GLY B 92 -1 N SER B 85 O LEU B 107 SHEET 4 N 6 ASN B 29 ASP B 36 -1 N TYR B 33 O PHE B 88 SHEET 5 N 6 GLY B 40 SER B 47 -1 O HIS B 45 N TRP B 32 SHEET 6 N 6 GLU B 54 LYS B 55 -1 O GLU B 54 N TYR B 46 SHEET 1 O 4 ASN B 8 VAL B 12 0 SHEET 2 O 4 THR B 105 LEU B 110 1 O LEU B 110 N ALA B 11 SHEET 3 O 4 SER B 85 GLY B 92 -1 N SER B 85 O LEU B 107 SHEET 4 O 4 TYR B 100 PHE B 101 -1 O TYR B 100 N SER B 91 SHEET 1 P 4 LYS B 160 VAL B 162 0 SHEET 2 P 4 VAL B 151 VAL B 157 -1 N VAL B 157 O LYS B 160 SHEET 3 P 4 HIS B 203 PHE B 210 -1 O GLN B 207 N SER B 154 SHEET 4 P 4 GLN B 229 TRP B 236 -1 O ALA B 233 N CYS B 206 SSBOND 1 CYS C 107 CYS C 163 1555 1555 2.03 SSBOND 2 CYS D 15 CYS D 79 1555 1555 2.03 SSBOND 3 CYS D 118 CYS D 174 1555 1555 2.02 SSBOND 4 CYS A 22 CYS A 90 1555 1555 2.05 SSBOND 5 CYS A 134 CYS A 184 1555 1555 2.05 SSBOND 6 CYS A 159 CYS B 167 1555 1555 2.06 SSBOND 7 CYS B 21 CYS B 89 1555 1555 2.04 SSBOND 8 CYS B 141 CYS B 206 1555 1555 2.02 CISPEP 1 SER C 15 PRO C 16 0 -2.88 CISPEP 2 PHE C 113 PRO C 114 0 -2.07 CISPEP 3 TYR D 124 PRO D 125 0 -0.12 CISPEP 4 SER A 6 PRO A 7 0 -0.71 CISPEP 5 SER B 5 PRO B 6 0 -3.38 CISPEP 6 TYR B 147 PRO B 148 0 3.19 CRYST1 239.855 73.016 65.669 90.00 90.71 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004169 0.000000 0.000052 0.00000 SCALE2 0.000000 0.013696 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015229 0.00000