data_3RG5 # _entry.id 3RG5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3RG5 pdb_00003rg5 10.2210/pdb3rg5/pdb NDB NA1076 ? ? RCSB RCSB064889 ? ? WWPDB D_1000064889 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-06-08 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-04-11 4 'Structure model' 1 3 2024-02-21 5 'Structure model' 1 4 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_ref_seq 5 4 'Structure model' struct_site 6 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq.db_align_beg' 4 4 'Structure model' '_struct_ref_seq.db_align_end' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3RG5 _pdbx_database_status.recvd_initial_deposition_date 2011-04-07 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wahl, M.C.' 1 'Ganichkin, O.M.' 2 'Anedchenko, E.A.' 3 # _citation.id primary _citation.title 'Crystal structure analysis reveals functional flexibility in the selenocysteine-specific tRNA from mouse.' _citation.journal_abbrev 'Plos One' _citation.journal_volume 6 _citation.page_first e20032 _citation.page_last e20032 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1932-6203 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21629646 _citation.pdbx_database_id_DOI 10.1371/journal.pone.0020032 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ganichkin, O.M.' 1 ? primary 'Anedchenko, E.A.' 2 ? primary 'Wahl, M.C.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'tRNA(Sec)' 27624.295 2 ? ? ? 'RNA 86-mer' 2 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 4 non-polymer syn 'ACETATE ION' 59.044 2 ? ? ? ? 5 water nat water 18.015 195 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GCCCGGAUGAUCCUCAGUGGUCUGGGGUGCAGGCUUCAAACCUGUAGCUGUUUAGCGACAGAGUGGUUCAAUUCCACCUU UCGGGC ; _entity_poly.pdbx_seq_one_letter_code_can ;GCCCGGAUGAUCCUCAGUGGUCUGGGGUGCAGGCUUCAAACCUGUAGCUGUUUAGCGACAGAGUGGUUCAAUUCCACCUU UCGGGC ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 GLYCEROL GOL 4 'ACETATE ION' ACT 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 C n 1 3 C n 1 4 C n 1 5 G n 1 6 G n 1 7 A n 1 8 U n 1 9 G n 1 10 A n 1 11 U n 1 12 C n 1 13 C n 1 14 U n 1 15 C n 1 16 A n 1 17 G n 1 18 U n 1 19 G n 1 20 G n 1 21 U n 1 22 C n 1 23 U n 1 24 G n 1 25 G n 1 26 G n 1 27 G n 1 28 U n 1 29 G n 1 30 C n 1 31 A n 1 32 G n 1 33 G n 1 34 C n 1 35 U n 1 36 U n 1 37 C n 1 38 A n 1 39 A n 1 40 A n 1 41 C n 1 42 C n 1 43 U n 1 44 G n 1 45 U n 1 46 A n 1 47 G n 1 48 C n 1 49 U n 1 50 G n 1 51 U n 1 52 U n 1 53 U n 1 54 A n 1 55 G n 1 56 C n 1 57 G n 1 58 A n 1 59 C n 1 60 A n 1 61 G n 1 62 A n 1 63 G n 1 64 U n 1 65 G n 1 66 G n 1 67 U n 1 68 U n 1 69 C n 1 70 A n 1 71 A n 1 72 U n 1 73 U n 1 74 C n 1 75 C n 1 76 A n 1 77 C n 1 78 C n 1 79 U n 1 80 U n 1 81 U n 1 82 C n 1 83 G n 1 84 G n 1 85 G n 1 86 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Mus musculus' _pdbx_entity_src_syn.organism_common_name mouse _pdbx_entity_src_syn.ncbi_taxonomy_id 10090 _pdbx_entity_src_syn.details 'Synthesized by in vitro transcription' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HOH non-polymer . WATER ? 'H2 O' 18.015 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 C 2 2 2 C C A . n A 1 3 C 3 3 3 C C A . n A 1 4 C 4 4 4 C C A . n A 1 5 G 5 5 5 G G A . n A 1 6 G 6 5 5 G G A A n A 1 7 A 7 5 5 A A A B n A 1 8 U 8 6 6 U U A . n A 1 9 G 9 7 7 G G A . n A 1 10 A 10 8 8 A A A . n A 1 11 U 11 9 9 U U A . n A 1 12 C 12 10 10 C C A . n A 1 13 C 13 11 11 C C A . n A 1 14 U 14 12 12 U U A . n A 1 15 C 15 13 13 C C A . n A 1 16 A 16 14 14 A A A . n A 1 17 G 17 15 15 G G A . n A 1 18 U 18 16 16 U U A . n A 1 19 G 19 18 18 G G A . n A 1 20 G 20 19 19 G G A . n A 1 21 U 21 20 20 U U A . n A 1 22 C 22 20 20 C C A A n A 1 23 U 23 21 21 U U A . n A 1 24 G 24 22 22 G G A . n A 1 25 G 25 23 23 G G A . n A 1 26 G 26 24 24 G G A . n A 1 27 G 27 25 25 G G A . n A 1 28 U 28 26 26 U U A . n A 1 29 G 29 27 27 G G A . n A 1 30 C 30 28 28 C C A . n A 1 31 A 31 29 29 A A A . n A 1 32 G 32 30 30 G G A . n A 1 33 G 33 31 31 G G A . n A 1 34 C 34 32 32 C C A . n A 1 35 U 35 33 33 U U A . n A 1 36 U 36 34 34 U U A . n A 1 37 C 37 35 35 C C A . n A 1 38 A 38 36 36 A A A . n A 1 39 A 39 37 37 A A A . n A 1 40 A 40 38 38 A A A . n A 1 41 C 41 39 39 C C A . n A 1 42 C 42 40 40 C C A . n A 1 43 U 43 41 41 U U A . n A 1 44 G 44 42 42 G G A . n A 1 45 U 45 43 43 U U A . n A 1 46 A 46 44 44 A A A . n A 1 47 G 47 45 45 G G A . n A 1 48 C 48 46 46 C C A . n A 1 49 U 49 47 47 U U A . n A 1 50 G 50 47 47 G G A A n A 1 51 U 51 47 47 U U A B n A 1 52 U 52 47 47 U U A C n A 1 53 U 53 47 47 U U A D n A 1 54 A 54 47 47 A A A E n A 1 55 G 55 47 47 G G A F n A 1 56 C 56 47 47 C C A G n A 1 57 G 57 47 47 G G A H n A 1 58 A 58 47 47 A A A I n A 1 59 C 59 47 47 C C A J n A 1 60 A 60 47 47 A A A K n A 1 61 G 61 47 47 G G A L n A 1 62 A 62 48 48 A A A . n A 1 63 G 63 50 50 G G A . n A 1 64 U 64 51 51 U U A . n A 1 65 G 65 52 52 G G A . n A 1 66 G 66 53 53 G G A . n A 1 67 U 67 54 54 U U A . n A 1 68 U 68 55 55 U U A . n A 1 69 C 69 56 56 C C A . n A 1 70 A 70 57 57 A A A . n A 1 71 A 71 58 58 A A A . n A 1 72 U 72 59 59 U U A . n A 1 73 U 73 60 60 U U A . n A 1 74 C 74 61 61 C C A . n A 1 75 C 75 62 62 C C A . n A 1 76 A 76 63 63 A A A . n A 1 77 C 77 64 64 C C A . n A 1 78 C 78 66 66 C C A . n A 1 79 U 79 67 67 U U A . n A 1 80 U 80 67 67 U U A A n A 1 81 U 81 67 67 U U A B n A 1 82 C 82 68 68 C C A . n A 1 83 G 83 69 69 G G A . n A 1 84 G 84 70 70 G G A . n A 1 85 G 85 71 71 G G A . n A 1 86 C 86 72 72 C C A . n B 1 1 G 1 1 1 G G B . n B 1 2 C 2 2 2 C C B . n B 1 3 C 3 3 3 C C B . n B 1 4 C 4 4 4 C C B . n B 1 5 G 5 5 5 G G B . n B 1 6 G 6 5 5 G G B A n B 1 7 A 7 5 5 A A B B n B 1 8 U 8 6 6 U U B . n B 1 9 G 9 7 7 G G B . n B 1 10 A 10 8 8 A A B . n B 1 11 U 11 9 9 U U B . n B 1 12 C 12 10 10 C C B . n B 1 13 C 13 11 11 C C B . n B 1 14 U 14 12 12 U U B . n B 1 15 C 15 13 13 C C B . n B 1 16 A 16 14 14 A A B . n B 1 17 G 17 15 15 G G B . n B 1 18 U 18 16 16 U U B . n B 1 19 G 19 18 18 G G B . n B 1 20 G 20 19 19 G G B . n B 1 21 U 21 20 20 U U B . n B 1 22 C 22 20 20 C C B A n B 1 23 U 23 21 21 U U B . n B 1 24 G 24 22 22 G G B . n B 1 25 G 25 23 23 G G B . n B 1 26 G 26 24 24 G G B . n B 1 27 G 27 25 25 G G B . n B 1 28 U 28 26 26 U U B . n B 1 29 G 29 27 27 G G B . n B 1 30 C 30 28 28 C C B . n B 1 31 A 31 29 29 A A B . n B 1 32 G 32 30 30 G G B . n B 1 33 G 33 31 31 G G B . n B 1 34 C 34 32 32 C C B . n B 1 35 U 35 33 33 U U B . n B 1 36 U 36 34 34 U U B . n B 1 37 C 37 35 35 C C B . n B 1 38 A 38 36 36 A A B . n B 1 39 A 39 37 37 A A B . n B 1 40 A 40 38 38 A A B . n B 1 41 C 41 39 39 C C B . n B 1 42 C 42 40 40 C C B . n B 1 43 U 43 41 41 U U B . n B 1 44 G 44 42 42 G G B . n B 1 45 U 45 43 43 U U B . n B 1 46 A 46 44 44 A A B . n B 1 47 G 47 45 45 G G B . n B 1 48 C 48 46 46 C C B . n B 1 49 U 49 47 47 U U B . n B 1 50 G 50 47 47 G G B A n B 1 51 U 51 47 47 U U B B n B 1 52 U 52 47 47 U U B C n B 1 53 U 53 47 47 U U B D n B 1 54 A 54 47 47 A A B E n B 1 55 G 55 47 47 G G B F n B 1 56 C 56 47 47 C C B G n B 1 57 G 57 47 47 G G B H n B 1 58 A 58 47 47 A A B I n B 1 59 C 59 47 47 C C B J n B 1 60 A 60 47 47 A A B K n B 1 61 G 61 47 47 G G B L n B 1 62 A 62 48 48 A A B . n B 1 63 G 63 50 50 G G B . n B 1 64 U 64 51 51 U U B . n B 1 65 G 65 52 52 G G B . n B 1 66 G 66 53 53 G G B . n B 1 67 U 67 54 54 U U B . n B 1 68 U 68 55 55 U U B . n B 1 69 C 69 56 56 C C B . n B 1 70 A 70 57 57 A A B . n B 1 71 A 71 58 58 A A B . n B 1 72 U 72 59 59 U U B . n B 1 73 U 73 60 60 U U B . n B 1 74 C 74 61 61 C C B . n B 1 75 C 75 62 62 C C B . n B 1 76 A 76 63 63 A A B . n B 1 77 C 77 64 64 C C B . n B 1 78 C 78 66 66 C C B . n B 1 79 U 79 67 67 U U B . n B 1 80 U 80 67 67 U U B A n B 1 81 U 81 67 67 U U B B n B 1 82 C 82 68 68 C C B . n B 1 83 G 83 69 69 G G B . n B 1 84 G 84 70 70 G G B . n B 1 85 G 85 71 71 G G B . n B 1 86 C 86 72 72 C C B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 1 73 1 SO4 SO4 A . D 3 GOL 1 74 1 GOL GOL A . E 4 ACT 1 75 2 ACT ACT A . F 2 SO4 1 73 2 SO4 SO4 B . G 3 GOL 1 74 3 GOL GOL B . H 4 ACT 1 75 1 ACT ACT B . I 5 HOH 1 49 49 HOH HOH A . I 5 HOH 2 76 76 HOH HOH A . I 5 HOH 3 77 5 HOH HOH A . I 5 HOH 4 78 78 HOH HOH A . I 5 HOH 5 79 79 HOH HOH A . I 5 HOH 6 80 6 HOH HOH A . I 5 HOH 7 81 81 HOH HOH A . I 5 HOH 8 82 82 HOH HOH A . I 5 HOH 9 83 83 HOH HOH A . I 5 HOH 10 84 7 HOH HOH A . I 5 HOH 11 85 85 HOH HOH A . I 5 HOH 12 86 86 HOH HOH A . I 5 HOH 13 87 87 HOH HOH A . I 5 HOH 14 88 9 HOH HOH A . I 5 HOH 15 89 11 HOH HOH A . I 5 HOH 16 90 90 HOH HOH A . I 5 HOH 17 91 15 HOH HOH A . I 5 HOH 18 92 92 HOH HOH A . I 5 HOH 19 93 16 HOH HOH A . I 5 HOH 20 94 18 HOH HOH A . I 5 HOH 21 95 19 HOH HOH A . I 5 HOH 22 96 20 HOH HOH A . I 5 HOH 23 97 97 HOH HOH A . I 5 HOH 24 98 22 HOH HOH A . I 5 HOH 25 99 23 HOH HOH A . I 5 HOH 26 100 27 HOH HOH A . I 5 HOH 27 101 30 HOH HOH A . I 5 HOH 28 102 32 HOH HOH A . I 5 HOH 29 103 33 HOH HOH A . I 5 HOH 30 104 35 HOH HOH A . I 5 HOH 31 105 36 HOH HOH A . I 5 HOH 32 106 41 HOH HOH A . I 5 HOH 33 107 43 HOH HOH A . I 5 HOH 34 108 44 HOH HOH A . I 5 HOH 35 109 109 HOH HOH A . I 5 HOH 36 110 110 HOH HOH A . I 5 HOH 37 111 111 HOH HOH A . I 5 HOH 38 112 112 HOH HOH A . I 5 HOH 39 113 45 HOH HOH A . I 5 HOH 40 114 50 HOH HOH A . I 5 HOH 41 115 55 HOH HOH A . I 5 HOH 42 116 57 HOH HOH A . I 5 HOH 43 117 64 HOH HOH A . I 5 HOH 44 118 67 HOH HOH A . I 5 HOH 45 119 71 HOH HOH A . I 5 HOH 46 120 73 HOH HOH A . I 5 HOH 47 121 121 HOH HOH A . I 5 HOH 48 122 74 HOH HOH A . I 5 HOH 49 123 123 HOH HOH A . I 5 HOH 50 129 129 HOH HOH A . I 5 HOH 51 130 130 HOH HOH A . I 5 HOH 52 136 136 HOH HOH A . I 5 HOH 53 137 137 HOH HOH A . I 5 HOH 54 138 138 HOH HOH A . I 5 HOH 55 141 141 HOH HOH A . I 5 HOH 56 142 142 HOH HOH A . I 5 HOH 57 147 147 HOH HOH A . I 5 HOH 58 151 151 HOH HOH A . I 5 HOH 59 155 155 HOH HOH A . I 5 HOH 60 157 157 HOH HOH A . I 5 HOH 61 161 161 HOH HOH A . I 5 HOH 62 164 164 HOH HOH A . I 5 HOH 63 167 167 HOH HOH A . I 5 HOH 64 168 168 HOH HOH A . I 5 HOH 65 169 169 HOH HOH A . I 5 HOH 66 170 170 HOH HOH A . I 5 HOH 67 172 172 HOH HOH A . I 5 HOH 68 175 175 HOH HOH A . I 5 HOH 69 178 178 HOH HOH A . I 5 HOH 70 182 182 HOH HOH A . I 5 HOH 71 183 183 HOH HOH A . I 5 HOH 72 187 187 HOH HOH A . I 5 HOH 73 188 188 HOH HOH A . I 5 HOH 74 189 189 HOH HOH A . I 5 HOH 75 190 190 HOH HOH A . I 5 HOH 76 191 191 HOH HOH A . J 5 HOH 1 17 17 HOH HOH B . J 5 HOH 2 65 65 HOH HOH B . J 5 HOH 3 76 1 HOH HOH B . J 5 HOH 4 77 77 HOH HOH B . J 5 HOH 5 78 2 HOH HOH B . J 5 HOH 6 79 3 HOH HOH B . J 5 HOH 7 80 80 HOH HOH B . J 5 HOH 8 81 4 HOH HOH B . J 5 HOH 9 82 8 HOH HOH B . J 5 HOH 10 83 10 HOH HOH B . J 5 HOH 11 84 84 HOH HOH B . J 5 HOH 12 85 12 HOH HOH B . J 5 HOH 13 86 13 HOH HOH B . J 5 HOH 14 87 14 HOH HOH B . J 5 HOH 15 88 88 HOH HOH B . J 5 HOH 16 89 89 HOH HOH B . J 5 HOH 17 90 21 HOH HOH B . J 5 HOH 18 91 91 HOH HOH B . J 5 HOH 19 92 24 HOH HOH B . J 5 HOH 20 93 93 HOH HOH B . J 5 HOH 21 94 94 HOH HOH B . J 5 HOH 22 95 95 HOH HOH B . J 5 HOH 23 96 96 HOH HOH B . J 5 HOH 24 97 25 HOH HOH B . J 5 HOH 25 98 98 HOH HOH B . J 5 HOH 26 99 99 HOH HOH B . J 5 HOH 27 100 100 HOH HOH B . J 5 HOH 28 101 101 HOH HOH B . J 5 HOH 29 102 102 HOH HOH B . J 5 HOH 30 103 103 HOH HOH B . J 5 HOH 31 104 104 HOH HOH B . J 5 HOH 32 105 105 HOH HOH B . J 5 HOH 33 106 106 HOH HOH B . J 5 HOH 34 107 107 HOH HOH B . J 5 HOH 35 108 108 HOH HOH B . J 5 HOH 36 109 26 HOH HOH B . J 5 HOH 37 110 28 HOH HOH B . J 5 HOH 38 111 29 HOH HOH B . J 5 HOH 39 112 31 HOH HOH B . J 5 HOH 40 113 113 HOH HOH B . J 5 HOH 41 114 114 HOH HOH B . J 5 HOH 42 115 115 HOH HOH B . J 5 HOH 43 116 116 HOH HOH B . J 5 HOH 44 117 117 HOH HOH B . J 5 HOH 45 118 118 HOH HOH B . J 5 HOH 46 119 119 HOH HOH B . J 5 HOH 47 120 120 HOH HOH B . J 5 HOH 48 121 34 HOH HOH B . J 5 HOH 49 122 122 HOH HOH B . J 5 HOH 50 123 37 HOH HOH B . J 5 HOH 51 124 124 HOH HOH B . J 5 HOH 52 125 125 HOH HOH B . J 5 HOH 53 126 126 HOH HOH B . J 5 HOH 54 127 127 HOH HOH B . J 5 HOH 55 128 128 HOH HOH B . J 5 HOH 56 129 38 HOH HOH B . J 5 HOH 57 130 39 HOH HOH B . J 5 HOH 58 131 131 HOH HOH B . J 5 HOH 59 132 132 HOH HOH B . J 5 HOH 60 133 133 HOH HOH B . J 5 HOH 61 134 134 HOH HOH B . J 5 HOH 62 135 135 HOH HOH B . J 5 HOH 63 136 40 HOH HOH B . J 5 HOH 64 137 42 HOH HOH B . J 5 HOH 65 138 46 HOH HOH B . J 5 HOH 66 139 139 HOH HOH B . J 5 HOH 67 140 140 HOH HOH B . J 5 HOH 68 141 47 HOH HOH B . J 5 HOH 69 142 48 HOH HOH B . J 5 HOH 70 143 143 HOH HOH B . J 5 HOH 71 144 144 HOH HOH B . J 5 HOH 72 145 145 HOH HOH B . J 5 HOH 73 146 146 HOH HOH B . J 5 HOH 74 147 51 HOH HOH B . J 5 HOH 75 148 148 HOH HOH B . J 5 HOH 76 149 149 HOH HOH B . J 5 HOH 77 150 150 HOH HOH B . J 5 HOH 78 151 52 HOH HOH B . J 5 HOH 79 152 152 HOH HOH B . J 5 HOH 80 153 153 HOH HOH B . J 5 HOH 81 154 154 HOH HOH B . J 5 HOH 82 155 53 HOH HOH B . J 5 HOH 83 156 156 HOH HOH B . J 5 HOH 84 157 54 HOH HOH B . J 5 HOH 85 158 158 HOH HOH B . J 5 HOH 86 159 159 HOH HOH B . J 5 HOH 87 160 160 HOH HOH B . J 5 HOH 88 161 56 HOH HOH B . J 5 HOH 89 162 162 HOH HOH B . J 5 HOH 90 163 163 HOH HOH B . J 5 HOH 91 164 58 HOH HOH B . J 5 HOH 92 165 165 HOH HOH B . J 5 HOH 93 166 166 HOH HOH B . J 5 HOH 94 167 59 HOH HOH B . J 5 HOH 95 168 60 HOH HOH B . J 5 HOH 96 169 61 HOH HOH B . J 5 HOH 97 170 62 HOH HOH B . J 5 HOH 98 171 171 HOH HOH B . J 5 HOH 99 172 63 HOH HOH B . J 5 HOH 100 173 173 HOH HOH B . J 5 HOH 101 174 174 HOH HOH B . J 5 HOH 102 175 66 HOH HOH B . J 5 HOH 103 176 176 HOH HOH B . J 5 HOH 104 177 177 HOH HOH B . J 5 HOH 105 178 68 HOH HOH B . J 5 HOH 106 179 179 HOH HOH B . J 5 HOH 107 180 180 HOH HOH B . J 5 HOH 108 181 181 HOH HOH B . J 5 HOH 109 182 69 HOH HOH B . J 5 HOH 110 183 70 HOH HOH B . J 5 HOH 111 184 184 HOH HOH B . J 5 HOH 112 185 185 HOH HOH B . J 5 HOH 113 186 186 HOH HOH B . J 5 HOH 114 187 72 HOH HOH B . J 5 HOH 115 188 75 HOH HOH B . J 5 HOH 116 192 192 HOH HOH B . J 5 HOH 117 193 193 HOH HOH B . J 5 HOH 118 194 194 HOH HOH B . J 5 HOH 119 195 195 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345dtb 'data collection' . ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.5.0102 ? 3 DENZO 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # _cell.entry_id 3RG5 _cell.length_a 48.872 _cell.length_b 96.055 _cell.length_c 71.841 _cell.angle_alpha 90.00 _cell.angle_beta 105.06 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3RG5 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3RG5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.95 _exptl_crystal.density_percent_sol 58.27 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.2 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1 M MES, pH 5.2, 10 mM magnesium acetate, 2.0 M ammonium sulfate, VAPOR DIFFUSION, SITTING DROP, temperature 293K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91841 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'BESSY BEAMLINE 14.2' _diffrn_source.pdbx_synchrotron_site BESSY _diffrn_source.pdbx_synchrotron_beamline 14.2 _diffrn_source.pdbx_wavelength 0.91841 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 3RG5 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 2.0 _reflns.number_obs 42189 _reflns.number_all ? _reflns.percent_possible_obs 97.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.047 _reflns.pdbx_netI_over_sigmaI 19.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.9 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.03 _reflns_shell.percent_possible_all 90.1 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.807 _reflns_shell.meanI_over_sigI_obs 1.2 _reflns_shell.pdbx_redundancy 3.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3RG5 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 40040 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.00 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 97.41 _refine.ls_R_factor_obs 0.21730 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.21539 _refine.ls_R_factor_R_free 0.25284 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 2124 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.962 _refine.correlation_coeff_Fo_to_Fc_free 0.946 _refine.B_iso_mean 46.800 _refine.aniso_B[1][1] -2.30 _refine.aniso_B[2][2] 1.70 _refine.aniso_B[3][3] 0.98 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.74 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'human tRNA(Sec)' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model isotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.176 _refine.pdbx_overall_ESU_R_Free 0.162 _refine.overall_SU_ML 0.134 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 4.988 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 3658 _refine_hist.pdbx_number_atoms_ligand 30 _refine_hist.number_atoms_solvent 195 _refine_hist.number_atoms_total 3883 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 50.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.021 ? 4109 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.749 3.000 ? 6391 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.080 0.200 ? 860 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.020 ? 1776 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.378 1.500 ? 9 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.626 2.000 ? 6 'X-RAY DIFFRACTION' ? r_scbond_it 1.602 3.000 ? 4100 'X-RAY DIFFRACTION' ? r_scangle_it 2.346 4.500 ? 6385 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.000 _refine_ls_shell.d_res_low 2.052 _refine_ls_shell.number_reflns_R_work 2700 _refine_ls_shell.R_factor_R_work 0.377 _refine_ls_shell.percent_reflns_obs 90.06 _refine_ls_shell.R_factor_R_free 0.424 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 172 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _database_PDB_matrix.entry_id 3RG5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3RG5 _struct.title 'Crystal Structure of Mouse tRNA(Sec)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3RG5 _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'Metal binding by RNA, RNA hydration, structural flexibility, tRNASec, tRNA fold, translation, SerRS, SecS, PSTK, RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 2 ? G N N 3 ? H N N 4 ? I N N 5 ? J N N 5 ? # _struct_ref.id 1 _struct_ref.db_name GB _struct_ref.db_code AC118017 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GCCCGAAAGGUGGAAUUGAACCACUCUGUCGCUAAACAGCUACAGGUUUGAAGCCUGCACCCCAGACCACUGAGGAUCAU CCGGGC ; _struct_ref.pdbx_align_begin 153188 _struct_ref.pdbx_db_accession 3RG5 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3RG5 A 1 ? 86 ? 3RG5 1 ? 72 ? 1 72 2 1 3RG5 B 1 ? 86 ? 3RG5 1 ? 72 ? 1 72 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 3 software_defined_assembly PISA dimeric 2 4 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 3 'ABSA (A^2)' 2080 ? 3 MORE -38 ? 3 'SSA (A^2)' 28350 ? 4 'ABSA (A^2)' 1580 ? 4 MORE -35 ? 4 'SSA (A^2)' 28840 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,I 2 1 B,F,G,H,J 3 1 A,B,C,D,E,F,G,H,I,J 4 1 A,C,D,E,I 4 2 B,F,G,H,J # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 1_556 x,y,z+1 1.0000000000 0.0000000000 0.0000000000 -18.6664770713 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 69.3735678392 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 86 N3 ? ? A G 1 A C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 86 O2 ? ? A G 1 A C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 86 N4 ? ? A G 1 A C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A C 2 N3 ? ? ? 1_555 A G 85 N1 ? ? A C 2 A G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A C 2 N4 ? ? ? 1_555 A G 85 O6 ? ? A C 2 A G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 2 O2 ? ? ? 1_555 A G 85 N2 ? ? A C 2 A G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 84 N1 ? ? A C 3 A G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 84 O6 ? ? A C 3 A G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 84 N2 ? ? A C 3 A G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 83 N2 ? ? A C 4 A G 69 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog11 hydrog ? ? A G 5 N1 ? ? ? 1_555 A C 82 N3 ? ? A G 5 A C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 5 N2 ? ? ? 1_555 A C 82 O2 ? ? A G 5 A C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 5 O6 ? ? ? 1_555 A C 82 N4 ? ? A G 5 A C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 6 N1 ? A ? 1_555 A U 81 O2 ? B A G 5 A U 67 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog15 hydrog ? ? A G 6 O6 ? A ? 1_555 A U 81 N3 ? B A G 5 A U 67 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog16 hydrog ? ? A A 7 N1 ? B ? 1_555 A U 80 N3 ? A A A 5 A U 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A A 7 N6 ? B ? 1_555 A U 80 O4 ? A A A 5 A U 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A U 8 N3 ? ? ? 1_555 A U 79 O4 ? ? A U 6 A U 67 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog19 hydrog ? ? A U 8 O2 ? ? ? 1_555 A U 79 N3 ? ? A U 6 A U 67 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog20 hydrog ? ? A G 9 N1 ? ? ? 1_555 A C 78 N3 ? ? A G 7 A C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 9 N2 ? ? ? 1_555 A C 78 O2 ? ? A G 7 A C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 9 O6 ? ? ? 1_555 A C 78 N4 ? ? A G 7 A C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A C 12 N3 ? ? ? 1_555 A G 27 N1 ? ? A C 10 A G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A C 12 N4 ? ? ? 1_555 A G 27 O6 ? ? A C 10 A G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A C 12 O2 ? ? ? 1_555 A G 27 N2 ? ? A C 10 A G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A C 13 N3 ? ? ? 1_555 A G 26 N1 ? ? A C 11 A G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 13 N4 ? ? ? 1_555 A G 26 O6 ? ? A C 11 A G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 13 O2 ? ? ? 1_555 A G 26 N2 ? ? A C 11 A G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A U 14 N3 ? ? ? 1_555 A G 25 O6 ? ? A U 12 A G 23 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog30 hydrog ? ? A U 14 O2 ? ? ? 1_555 A G 25 N1 ? ? A U 12 A G 23 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog31 hydrog ? ? A C 15 N3 ? ? ? 1_555 A G 24 N1 ? ? A C 13 A G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A C 15 N4 ? ? ? 1_555 A G 24 O6 ? ? A C 13 A G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A C 15 O2 ? ? ? 1_555 A G 24 N2 ? ? A C 13 A G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A A 16 N1 ? ? ? 1_555 A U 23 N3 ? ? A A 14 A U 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A A 16 N6 ? ? ? 1_555 A U 23 O4 ? ? A A 14 A U 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 17 N1 ? ? ? 1_555 A C 22 N3 ? A A G 15 A C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A G 17 N2 ? ? ? 1_555 A C 22 O2 ? A A G 15 A C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A G 17 O6 ? ? ? 1_555 A C 22 N4 ? A A G 15 A C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A U 18 N3 ? ? ? 1_555 A U 72 O2 ? ? A U 16 A U 59 1_555 ? ? ? ? ? ? TYPE_13_PAIR ? ? ? hydrog40 hydrog ? ? A U 18 O2 ? ? ? 1_555 A U 72 N3 ? ? A U 16 A U 59 1_555 ? ? ? ? ? ? TYPE_13_PAIR ? ? ? hydrog41 hydrog ? ? A G 19 N1 ? ? ? 1_555 A U 68 O2 ? ? A G 18 A U 55 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog42 hydrog ? ? A G 20 N2 ? ? ? 1_555 A U 21 O4 ? ? A G 19 A U 20 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog43 hydrog ? ? A G 20 N1 ? ? ? 1_555 A C 69 N3 ? ? A G 19 A C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A G 20 N2 ? ? ? 1_555 A C 69 O2 ? ? A G 19 A C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A G 20 O6 ? ? ? 1_555 A C 69 N4 ? ? A G 19 A C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A U 28 N3 ? ? ? 1_555 A A 46 N1 ? ? A U 26 A A 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A U 28 O4 ? ? ? 1_555 A A 46 N6 ? ? A U 26 A A 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A G 29 N1 ? ? ? 1_555 A U 45 O2 ? ? A G 27 A U 43 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog49 hydrog ? ? A G 29 O6 ? ? ? 1_555 A U 45 N3 ? ? A G 27 A U 43 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog50 hydrog ? ? A C 30 N3 ? ? ? 1_555 A G 44 N1 ? ? A C 28 A G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A C 30 N4 ? ? ? 1_555 A G 44 O6 ? ? A C 28 A G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A C 30 O2 ? ? ? 1_555 A G 44 N2 ? ? A C 28 A G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A A 31 N1 ? ? ? 1_555 A U 43 N3 ? ? A A 29 A U 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A A 31 N6 ? ? ? 1_555 A U 43 O4 ? ? A A 29 A U 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A G 32 N1 ? ? ? 1_555 A C 42 N3 ? ? A G 30 A C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A G 32 N2 ? ? ? 1_555 A C 42 O2 ? ? A G 30 A C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 32 O6 ? ? ? 1_555 A C 42 N4 ? ? A G 30 A C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A G 33 N1 ? ? ? 1_555 A C 41 N3 ? ? A G 31 A C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A G 33 N2 ? ? ? 1_555 A C 41 O2 ? ? A G 31 A C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A G 33 O6 ? ? ? 1_555 A C 41 N4 ? ? A G 31 A C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A C 34 O2 ? ? ? 1_555 A A 40 N6 ? ? A C 32 A A 38 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog62 hydrog ? ? A U 35 N3 ? ? ? 1_555 A A 39 N1 ? ? A U 33 A A 37 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog63 hydrog ? ? A U 35 O2 ? ? ? 1_555 A A 39 N6 ? ? A U 33 A A 37 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog64 hydrog ? ? A C 48 N3 ? ? ? 1_555 A G 61 N1 ? L A C 46 A G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A C 48 N4 ? ? ? 1_555 A G 61 O6 ? L A C 46 A G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A C 48 O2 ? ? ? 1_555 A G 61 N2 ? L A C 46 A G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A U 49 N3 ? ? ? 1_555 A A 60 N1 ? K A U 47 A A 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A U 49 O4 ? ? ? 1_555 A A 60 N6 ? K A U 47 A A 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A G 50 N1 ? A ? 1_555 A C 59 N3 ? J A G 47 A C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A G 50 N2 ? A ? 1_555 A C 59 O2 ? J A G 47 A C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A G 50 O6 ? A ? 1_555 A C 59 N4 ? J A G 47 A C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A U 51 N3 ? B ? 1_555 A A 58 N1 ? I A U 47 A A 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A U 51 O4 ? B ? 1_555 A A 58 N6 ? I A U 47 A A 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A U 52 N3 ? C ? 1_555 A G 57 O6 ? H A U 47 A G 47 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog75 hydrog ? ? A U 52 O2 ? C ? 1_555 A G 57 N1 ? H A U 47 A G 47 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog76 hydrog ? ? A U 53 O2 ? D ? 1_555 A C 56 N4 ? G A U 47 A C 47 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? ? hydrog77 hydrog ? ? A G 63 N1 ? ? ? 1_555 A C 77 N3 ? ? A G 50 A C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A G 63 N2 ? ? ? 1_555 A C 77 O2 ? ? A G 50 A C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? A G 63 O6 ? ? ? 1_555 A C 77 N4 ? ? A G 50 A C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? A U 64 N3 ? ? ? 1_555 A A 76 N1 ? ? A U 51 A A 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? A U 64 O4 ? ? ? 1_555 A A 76 N6 ? ? A U 51 A A 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? A G 65 N1 ? ? ? 1_555 A C 75 N3 ? ? A G 52 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A G 65 N2 ? ? ? 1_555 A C 75 O2 ? ? A G 52 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A G 65 O6 ? ? ? 1_555 A C 75 N4 ? ? A G 52 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? A G 66 N1 ? ? ? 1_555 A C 74 N3 ? ? A G 53 A C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? A G 66 N2 ? ? ? 1_555 A C 74 O2 ? ? A G 53 A C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? A G 66 O6 ? ? ? 1_555 A C 74 N4 ? ? A G 53 A C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? A U 67 N3 ? ? ? 1_555 A A 71 N7 ? ? A U 54 A A 58 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog89 hydrog ? ? A U 67 O2 ? ? ? 1_555 A A 71 N6 ? ? A U 54 A A 58 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog90 hydrog ? ? B G 1 N1 ? ? ? 1_555 B C 86 N3 ? ? B G 1 B C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? B G 1 N2 ? ? ? 1_555 B C 86 O2 ? ? B G 1 B C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? B G 1 O6 ? ? ? 1_555 B C 86 N4 ? ? B G 1 B C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? B C 2 N3 ? ? ? 1_555 B G 85 N1 ? ? B C 2 B G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? B C 2 N4 ? ? ? 1_555 B G 85 O6 ? ? B C 2 B G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? B C 2 O2 ? ? ? 1_555 B G 85 N2 ? ? B C 2 B G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? B C 3 N3 ? ? ? 1_555 B G 84 N1 ? ? B C 3 B G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? B C 3 N4 ? ? ? 1_555 B G 84 O6 ? ? B C 3 B G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? B C 3 O2 ? ? ? 1_555 B G 84 N2 ? ? B C 3 B G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? B C 4 N3 ? ? ? 1_555 B G 83 N1 ? ? B C 4 B G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? B C 4 N4 ? ? ? 1_555 B G 83 O6 ? ? B C 4 B G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? B C 4 O2 ? ? ? 1_555 B G 83 N2 ? ? B C 4 B G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? B G 5 N1 ? ? ? 1_555 B C 82 N3 ? ? B G 5 B C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? B G 5 N2 ? ? ? 1_555 B C 82 O2 ? ? B G 5 B C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? B G 5 O6 ? ? ? 1_555 B C 82 N4 ? ? B G 5 B C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? B G 6 N1 ? A ? 1_555 B U 81 O2 ? B B G 5 B U 67 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog106 hydrog ? ? B G 6 O6 ? A ? 1_555 B U 81 N3 ? B B G 5 B U 67 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog107 hydrog ? ? B A 7 N1 ? B ? 1_555 B U 80 N3 ? A B A 5 B U 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? B A 7 N6 ? B ? 1_555 B U 80 O4 ? A B A 5 B U 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? B U 8 N3 ? ? ? 1_555 B U 79 O4 ? ? B U 6 B U 67 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog110 hydrog ? ? B U 8 O2 ? ? ? 1_555 B U 79 N3 ? ? B U 6 B U 67 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog111 hydrog ? ? B G 9 N1 ? ? ? 1_555 B C 78 N3 ? ? B G 7 B C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? B G 9 N2 ? ? ? 1_555 B C 78 O2 ? ? B G 7 B C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? B G 9 O6 ? ? ? 1_555 B C 78 N4 ? ? B G 7 B C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? B C 12 N3 ? ? ? 1_555 B G 27 N1 ? ? B C 10 B G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? B C 12 N4 ? ? ? 1_555 B G 27 O6 ? ? B C 10 B G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? B C 12 O2 ? ? ? 1_555 B G 27 N2 ? ? B C 10 B G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? B C 13 N3 ? ? ? 1_555 B G 26 N1 ? ? B C 11 B G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog118 hydrog ? ? B C 13 N4 ? ? ? 1_555 B G 26 O6 ? ? B C 11 B G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog119 hydrog ? ? B C 13 O2 ? ? ? 1_555 B G 26 N2 ? ? B C 11 B G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog120 hydrog ? ? B U 14 N3 ? ? ? 1_555 B G 25 O6 ? ? B U 12 B G 23 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog121 hydrog ? ? B U 14 O2 ? ? ? 1_555 B G 25 N1 ? ? B U 12 B G 23 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog122 hydrog ? ? B C 15 N3 ? ? ? 1_555 B G 24 N1 ? ? B C 13 B G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? B C 15 N4 ? ? ? 1_555 B G 24 O6 ? ? B C 13 B G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? B C 15 O2 ? ? ? 1_555 B G 24 N2 ? ? B C 13 B G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? B A 16 N1 ? ? ? 1_555 B U 23 N3 ? ? B A 14 B U 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? B A 16 N6 ? ? ? 1_555 B U 23 O4 ? ? B A 14 B U 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? B G 17 N1 ? ? ? 1_555 B C 22 N3 ? A B G 15 B C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? B G 17 N2 ? ? ? 1_555 B C 22 O2 ? A B G 15 B C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? B G 17 O6 ? ? ? 1_555 B C 22 N4 ? A B G 15 B C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? B U 18 N3 ? ? ? 1_555 B U 72 O2 ? ? B U 16 B U 59 1_555 ? ? ? ? ? ? TYPE_13_PAIR ? ? ? hydrog131 hydrog ? ? B U 18 O2 ? ? ? 1_555 B U 72 N3 ? ? B U 16 B U 59 1_555 ? ? ? ? ? ? TYPE_13_PAIR ? ? ? hydrog132 hydrog ? ? B G 19 N1 ? ? ? 1_555 B U 68 O2 ? ? B G 18 B U 55 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog133 hydrog ? ? B G 20 N2 ? ? ? 1_555 B U 21 O4 ? ? B G 19 B U 20 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog134 hydrog ? ? B G 20 N1 ? ? ? 1_555 B C 69 N3 ? ? B G 19 B C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog135 hydrog ? ? B G 20 N2 ? ? ? 1_555 B C 69 O2 ? ? B G 19 B C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog136 hydrog ? ? B G 20 O6 ? ? ? 1_555 B C 69 N4 ? ? B G 19 B C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog137 hydrog ? ? B U 28 N3 ? ? ? 1_555 B A 46 N1 ? ? B U 26 B A 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog138 hydrog ? ? B U 28 O4 ? ? ? 1_555 B A 46 N6 ? ? B U 26 B A 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog139 hydrog ? ? B G 29 N1 ? ? ? 1_555 B U 45 O2 ? ? B G 27 B U 43 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog140 hydrog ? ? B G 29 O6 ? ? ? 1_555 B U 45 N3 ? ? B G 27 B U 43 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog141 hydrog ? ? B C 30 N3 ? ? ? 1_555 B G 44 N1 ? ? B C 28 B G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog142 hydrog ? ? B C 30 N4 ? ? ? 1_555 B G 44 O6 ? ? B C 28 B G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog143 hydrog ? ? B C 30 O2 ? ? ? 1_555 B G 44 N2 ? ? B C 28 B G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog144 hydrog ? ? B A 31 N1 ? ? ? 1_555 B U 43 N3 ? ? B A 29 B U 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog145 hydrog ? ? B A 31 N6 ? ? ? 1_555 B U 43 O4 ? ? B A 29 B U 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog146 hydrog ? ? B G 32 N1 ? ? ? 1_555 B C 42 N3 ? ? B G 30 B C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog147 hydrog ? ? B G 32 N2 ? ? ? 1_555 B C 42 O2 ? ? B G 30 B C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog148 hydrog ? ? B G 32 O6 ? ? ? 1_555 B C 42 N4 ? ? B G 30 B C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog149 hydrog ? ? B G 33 N1 ? ? ? 1_555 B C 41 N3 ? ? B G 31 B C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog150 hydrog ? ? B G 33 N2 ? ? ? 1_555 B C 41 O2 ? ? B G 31 B C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog151 hydrog ? ? B G 33 O6 ? ? ? 1_555 B C 41 N4 ? ? B G 31 B C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog152 hydrog ? ? B C 34 N3 ? ? ? 1_555 B A 40 N6 ? ? B C 32 B A 38 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog153 hydrog ? ? B U 35 O2 ? ? ? 1_555 B A 39 N6 ? ? B U 33 B A 37 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog154 hydrog ? ? B G 47 N1 ? ? ? 1_555 B A 62 N1 ? ? B G 45 B A 48 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog155 hydrog ? ? B G 47 O6 ? ? ? 1_555 B A 62 N6 ? ? B G 45 B A 48 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog156 hydrog ? ? B C 48 N3 ? ? ? 1_555 B G 61 N1 ? L B C 46 B G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog157 hydrog ? ? B C 48 N4 ? ? ? 1_555 B G 61 O6 ? L B C 46 B G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog158 hydrog ? ? B C 48 O2 ? ? ? 1_555 B G 61 N2 ? L B C 46 B G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog159 hydrog ? ? B U 49 N3 ? ? ? 1_555 B A 60 N1 ? K B U 47 B A 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog160 hydrog ? ? B U 49 O4 ? ? ? 1_555 B A 60 N6 ? K B U 47 B A 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog161 hydrog ? ? B G 50 N1 ? A ? 1_555 B C 59 N3 ? J B G 47 B C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog162 hydrog ? ? B G 50 N2 ? A ? 1_555 B C 59 O2 ? J B G 47 B C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog163 hydrog ? ? B G 50 O6 ? A ? 1_555 B C 59 N4 ? J B G 47 B C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog164 hydrog ? ? B U 51 N3 ? B ? 1_555 B A 58 N1 ? I B U 47 B A 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog165 hydrog ? ? B U 51 O4 ? B ? 1_555 B A 58 N6 ? I B U 47 B A 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog166 hydrog ? ? B U 52 N3 ? C ? 1_555 B G 57 O6 ? H B U 47 B G 47 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog167 hydrog ? ? B U 52 O2 ? C ? 1_555 B G 57 N1 ? H B U 47 B G 47 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog168 hydrog ? ? B U 53 O2 ? D ? 1_555 B C 56 N4 ? G B U 47 B C 47 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? ? hydrog169 hydrog ? ? B G 63 N1 ? ? ? 1_555 B C 77 N3 ? ? B G 50 B C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog170 hydrog ? ? B G 63 N2 ? ? ? 1_555 B C 77 O2 ? ? B G 50 B C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog171 hydrog ? ? B G 63 O6 ? ? ? 1_555 B C 77 N4 ? ? B G 50 B C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog172 hydrog ? ? B U 64 N3 ? ? ? 1_555 B A 76 N1 ? ? B U 51 B A 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog173 hydrog ? ? B U 64 O4 ? ? ? 1_555 B A 76 N6 ? ? B U 51 B A 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog174 hydrog ? ? B G 65 N1 ? ? ? 1_555 B C 75 N3 ? ? B G 52 B C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog175 hydrog ? ? B G 65 N2 ? ? ? 1_555 B C 75 O2 ? ? B G 52 B C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog176 hydrog ? ? B G 65 O6 ? ? ? 1_555 B C 75 N4 ? ? B G 52 B C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog177 hydrog ? ? B G 66 N1 ? ? ? 1_555 B C 74 N3 ? ? B G 53 B C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog178 hydrog ? ? B G 66 N2 ? ? ? 1_555 B C 74 O2 ? ? B G 53 B C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog179 hydrog ? ? B G 66 O6 ? ? ? 1_555 B C 74 N4 ? ? B G 53 B C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog180 hydrog ? ? B U 67 N3 ? ? ? 1_555 B A 71 N7 ? ? B U 54 B A 58 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog181 hydrog ? ? B U 67 O2 ? ? ? 1_555 B A 71 N6 ? ? B U 54 B A 58 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 73 ? 5 'BINDING SITE FOR RESIDUE SO4 A 73' AC2 Software B SO4 73 ? 3 'BINDING SITE FOR RESIDUE SO4 B 73' AC3 Software A GOL 74 ? 7 'BINDING SITE FOR RESIDUE GOL A 74' AC4 Software B GOL 74 ? 9 'BINDING SITE FOR RESIDUE GOL B 74' AC5 Software B ACT 75 ? 7 'BINDING SITE FOR RESIDUE ACT B 75' AC6 Software A ACT 75 ? 1 'BINDING SITE FOR RESIDUE ACT A 75' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 C A 12 ? C A 10 . ? 1_555 ? 2 AC1 5 C A 13 ? C A 11 . ? 1_555 ? 3 AC1 5 HOH I . ? HOH A 118 . ? 1_555 ? 4 AC1 5 HOH I . ? HOH A 142 . ? 1_555 ? 5 AC1 5 HOH I . ? HOH A 157 . ? 1_555 ? 6 AC2 3 C B 12 ? C B 10 . ? 1_555 ? 7 AC2 3 C B 13 ? C B 11 . ? 1_555 ? 8 AC2 3 HOH J . ? HOH B 168 . ? 1_555 ? 9 AC3 7 C A 12 ? C A 10 . ? 1_555 ? 10 AC3 7 U A 28 ? U A 26 . ? 1_555 ? 11 AC3 7 G A 29 ? G A 27 . ? 1_555 ? 12 AC3 7 HOH I . ? HOH A 129 . ? 1_555 ? 13 AC3 7 G B 27 ? G B 25 . ? 1_555 ? 14 AC3 7 ACT H . ? ACT B 75 . ? 1_555 ? 15 AC3 7 HOH J . ? HOH B 79 . ? 1_555 ? 16 AC4 9 G A 32 ? G A 30 . ? 1_455 ? 17 AC4 9 G A 33 ? G A 31 . ? 1_455 ? 18 AC4 9 HOH I . ? HOH A 175 . ? 1_455 ? 19 AC4 9 HOH I . ? HOH A 191 . ? 1_455 ? 20 AC4 9 G B 32 ? G B 30 . ? 1_555 ? 21 AC4 9 G B 33 ? G B 31 . ? 1_555 ? 22 AC4 9 U B 43 ? U B 41 . ? 1_555 ? 23 AC4 9 HOH J . ? HOH B 193 . ? 1_555 ? 24 AC4 9 HOH J . ? HOH B 195 . ? 1_555 ? 25 AC5 7 C A 13 ? C A 11 . ? 1_555 ? 26 AC5 7 GOL D . ? GOL A 74 . ? 1_555 ? 27 AC5 7 HOH I . ? HOH A 129 . ? 1_555 ? 28 AC5 7 C B 12 ? C B 10 . ? 1_555 ? 29 AC5 7 U B 28 ? U B 26 . ? 1_555 ? 30 AC5 7 G B 29 ? G B 27 . ? 1_555 ? 31 AC5 7 HOH J . ? HOH B 139 . ? 1_555 ? 32 AC6 1 G A 24 ? G A 22 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 C2 A A 48 ? ? O A HOH 178 ? ? 1.89 2 1 O6 A G 45 ? ? O A HOH 178 ? ? 2.02 3 1 OP2 B U 33 ? ? O B HOH 178 ? ? 2.09 4 1 "O2'" A G 30 ? ? O A HOH 175 ? ? 2.18 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 P A G 1 ? ? OP3 A G 1 ? ? 1.488 1.607 -0.119 0.012 N 2 1 P B G 1 ? ? OP3 B G 1 ? ? 1.486 1.607 -0.121 0.012 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A A 5 B ? "C1'" A A 5 B ? N9 A A 5 B ? 113.42 108.50 4.92 0.70 N 2 1 "O4'" A U 9 ? ? "C1'" A U 9 ? ? N1 A U 9 ? ? 113.47 108.50 4.97 0.70 N 3 1 "O4'" A U 12 ? ? "C1'" A U 12 ? ? N1 A U 12 ? ? 113.66 108.50 5.16 0.70 N 4 1 "O4'" A U 26 ? ? "C1'" A U 26 ? ? N1 A U 26 ? ? 113.79 108.50 5.29 0.70 N 5 1 "O4'" A C 32 ? ? "C1'" A C 32 ? ? N1 A C 32 ? ? 113.07 108.50 4.57 0.70 N 6 1 "O4'" A A 37 ? ? "C1'" A A 37 ? ? N9 A A 37 ? ? 114.42 108.50 5.92 0.70 N 7 1 "O4'" A U 43 ? ? "C1'" A U 43 ? ? N1 A U 43 ? ? 112.81 108.50 4.31 0.70 N 8 1 "O4'" A U 47 C ? "C1'" A U 47 C ? N1 A U 47 C ? 114.60 108.50 6.10 0.70 N 9 1 "O4'" A U 47 D ? "C1'" A U 47 D ? N1 A U 47 D ? 113.66 108.50 5.16 0.70 N 10 1 "C5'" A A 47 E ? "C4'" A A 47 E ? "C3'" A A 47 E ? 106.77 115.20 -8.43 1.40 N 11 1 "O5'" A G 47 H ? P A G 47 H ? OP1 A G 47 H ? 98.82 105.70 -6.88 0.90 N 12 1 "O4'" A G 52 ? ? "C4'" A G 52 ? ? "C3'" A G 52 ? ? 97.07 104.00 -6.93 1.00 N 13 1 "O4'" A C 68 ? ? "C1'" A C 68 ? ? N1 A C 68 ? ? 113.07 108.50 4.57 0.70 N 14 1 "O4'" B G 7 ? ? "C1'" B G 7 ? ? N9 B G 7 ? ? 102.90 108.20 -5.30 0.80 N 15 1 "C3'" B G 19 ? ? "O3'" B G 19 ? ? P B U 20 ? ? 127.64 119.70 7.94 1.20 Y 16 1 "O4'" B C 28 ? ? "C1'" B C 28 ? ? N1 B C 28 ? ? 114.09 108.50 5.59 0.70 N 17 1 "O5'" B G 31 ? ? "C5'" B G 31 ? ? "C4'" B G 31 ? ? 104.46 109.40 -4.94 0.80 N 18 1 "O4'" B U 33 ? ? "C1'" B U 33 ? ? N1 B U 33 ? ? 116.21 108.50 7.71 0.70 N 19 1 N1 B C 40 ? ? "C1'" B C 40 ? ? "C2'" B C 40 ? ? 122.00 114.00 8.00 1.30 N 20 1 "O5'" B G 47 A ? P B G 47 A ? OP2 B G 47 A ? 98.72 105.70 -6.98 0.90 N 21 1 N9 B G 47 A ? "C1'" B G 47 A ? "C2'" B G 47 A ? 104.56 112.00 -7.44 1.10 N 22 1 "O4'" B C 47 J ? "C1'" B C 47 J ? N1 B C 47 J ? 114.11 108.50 5.61 0.70 N 23 1 "O4'" B C 61 ? ? "C1'" B C 61 ? ? N1 B C 61 ? ? 113.42 108.50 4.92 0.70 N 24 1 "O4'" B C 66 ? ? "C1'" B C 66 ? ? N1 B C 66 ? ? 113.58 108.50 5.08 0.70 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ACT C C N N 38 ACT O O N N 39 ACT OXT O N N 40 ACT CH3 C N N 41 ACT H1 H N N 42 ACT H2 H N N 43 ACT H3 H N N 44 C OP3 O N N 45 C P P N N 46 C OP1 O N N 47 C OP2 O N N 48 C "O5'" O N N 49 C "C5'" C N N 50 C "C4'" C N R 51 C "O4'" O N N 52 C "C3'" C N S 53 C "O3'" O N N 54 C "C2'" C N R 55 C "O2'" O N N 56 C "C1'" C N R 57 C N1 N N N 58 C C2 C N N 59 C O2 O N N 60 C N3 N N N 61 C C4 C N N 62 C N4 N N N 63 C C5 C N N 64 C C6 C N N 65 C HOP3 H N N 66 C HOP2 H N N 67 C "H5'" H N N 68 C "H5''" H N N 69 C "H4'" H N N 70 C "H3'" H N N 71 C "HO3'" H N N 72 C "H2'" H N N 73 C "HO2'" H N N 74 C "H1'" H N N 75 C H41 H N N 76 C H42 H N N 77 C H5 H N N 78 C H6 H N N 79 G OP3 O N N 80 G P P N N 81 G OP1 O N N 82 G OP2 O N N 83 G "O5'" O N N 84 G "C5'" C N N 85 G "C4'" C N R 86 G "O4'" O N N 87 G "C3'" C N S 88 G "O3'" O N N 89 G "C2'" C N R 90 G "O2'" O N N 91 G "C1'" C N R 92 G N9 N Y N 93 G C8 C Y N 94 G N7 N Y N 95 G C5 C Y N 96 G C6 C N N 97 G O6 O N N 98 G N1 N N N 99 G C2 C N N 100 G N2 N N N 101 G N3 N N N 102 G C4 C Y N 103 G HOP3 H N N 104 G HOP2 H N N 105 G "H5'" H N N 106 G "H5''" H N N 107 G "H4'" H N N 108 G "H3'" H N N 109 G "HO3'" H N N 110 G "H2'" H N N 111 G "HO2'" H N N 112 G "H1'" H N N 113 G H8 H N N 114 G H1 H N N 115 G H21 H N N 116 G H22 H N N 117 GOL C1 C N N 118 GOL O1 O N N 119 GOL C2 C N N 120 GOL O2 O N N 121 GOL C3 C N N 122 GOL O3 O N N 123 GOL H11 H N N 124 GOL H12 H N N 125 GOL HO1 H N N 126 GOL H2 H N N 127 GOL HO2 H N N 128 GOL H31 H N N 129 GOL H32 H N N 130 GOL HO3 H N N 131 HOH O O N N 132 HOH H1 H N N 133 HOH H2 H N N 134 SO4 S S N N 135 SO4 O1 O N N 136 SO4 O2 O N N 137 SO4 O3 O N N 138 SO4 O4 O N N 139 U OP3 O N N 140 U P P N N 141 U OP1 O N N 142 U OP2 O N N 143 U "O5'" O N N 144 U "C5'" C N N 145 U "C4'" C N R 146 U "O4'" O N N 147 U "C3'" C N S 148 U "O3'" O N N 149 U "C2'" C N R 150 U "O2'" O N N 151 U "C1'" C N R 152 U N1 N N N 153 U C2 C N N 154 U O2 O N N 155 U N3 N N N 156 U C4 C N N 157 U O4 O N N 158 U C5 C N N 159 U C6 C N N 160 U HOP3 H N N 161 U HOP2 H N N 162 U "H5'" H N N 163 U "H5''" H N N 164 U "H4'" H N N 165 U "H3'" H N N 166 U "HO3'" H N N 167 U "H2'" H N N 168 U "HO2'" H N N 169 U "H1'" H N N 170 U H3 H N N 171 U H5 H N N 172 U H6 H N N 173 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ACT C O doub N N 40 ACT C OXT sing N N 41 ACT C CH3 sing N N 42 ACT CH3 H1 sing N N 43 ACT CH3 H2 sing N N 44 ACT CH3 H3 sing N N 45 C OP3 P sing N N 46 C OP3 HOP3 sing N N 47 C P OP1 doub N N 48 C P OP2 sing N N 49 C P "O5'" sing N N 50 C OP2 HOP2 sing N N 51 C "O5'" "C5'" sing N N 52 C "C5'" "C4'" sing N N 53 C "C5'" "H5'" sing N N 54 C "C5'" "H5''" sing N N 55 C "C4'" "O4'" sing N N 56 C "C4'" "C3'" sing N N 57 C "C4'" "H4'" sing N N 58 C "O4'" "C1'" sing N N 59 C "C3'" "O3'" sing N N 60 C "C3'" "C2'" sing N N 61 C "C3'" "H3'" sing N N 62 C "O3'" "HO3'" sing N N 63 C "C2'" "O2'" sing N N 64 C "C2'" "C1'" sing N N 65 C "C2'" "H2'" sing N N 66 C "O2'" "HO2'" sing N N 67 C "C1'" N1 sing N N 68 C "C1'" "H1'" sing N N 69 C N1 C2 sing N N 70 C N1 C6 sing N N 71 C C2 O2 doub N N 72 C C2 N3 sing N N 73 C N3 C4 doub N N 74 C C4 N4 sing N N 75 C C4 C5 sing N N 76 C N4 H41 sing N N 77 C N4 H42 sing N N 78 C C5 C6 doub N N 79 C C5 H5 sing N N 80 C C6 H6 sing N N 81 G OP3 P sing N N 82 G OP3 HOP3 sing N N 83 G P OP1 doub N N 84 G P OP2 sing N N 85 G P "O5'" sing N N 86 G OP2 HOP2 sing N N 87 G "O5'" "C5'" sing N N 88 G "C5'" "C4'" sing N N 89 G "C5'" "H5'" sing N N 90 G "C5'" "H5''" sing N N 91 G "C4'" "O4'" sing N N 92 G "C4'" "C3'" sing N N 93 G "C4'" "H4'" sing N N 94 G "O4'" "C1'" sing N N 95 G "C3'" "O3'" sing N N 96 G "C3'" "C2'" sing N N 97 G "C3'" "H3'" sing N N 98 G "O3'" "HO3'" sing N N 99 G "C2'" "O2'" sing N N 100 G "C2'" "C1'" sing N N 101 G "C2'" "H2'" sing N N 102 G "O2'" "HO2'" sing N N 103 G "C1'" N9 sing N N 104 G "C1'" "H1'" sing N N 105 G N9 C8 sing Y N 106 G N9 C4 sing Y N 107 G C8 N7 doub Y N 108 G C8 H8 sing N N 109 G N7 C5 sing Y N 110 G C5 C6 sing N N 111 G C5 C4 doub Y N 112 G C6 O6 doub N N 113 G C6 N1 sing N N 114 G N1 C2 sing N N 115 G N1 H1 sing N N 116 G C2 N2 sing N N 117 G C2 N3 doub N N 118 G N2 H21 sing N N 119 G N2 H22 sing N N 120 G N3 C4 sing N N 121 GOL C1 O1 sing N N 122 GOL C1 C2 sing N N 123 GOL C1 H11 sing N N 124 GOL C1 H12 sing N N 125 GOL O1 HO1 sing N N 126 GOL C2 O2 sing N N 127 GOL C2 C3 sing N N 128 GOL C2 H2 sing N N 129 GOL O2 HO2 sing N N 130 GOL C3 O3 sing N N 131 GOL C3 H31 sing N N 132 GOL C3 H32 sing N N 133 GOL O3 HO3 sing N N 134 HOH O H1 sing N N 135 HOH O H2 sing N N 136 SO4 S O1 doub N N 137 SO4 S O2 doub N N 138 SO4 S O3 sing N N 139 SO4 S O4 sing N N 140 U OP3 P sing N N 141 U OP3 HOP3 sing N N 142 U P OP1 doub N N 143 U P OP2 sing N N 144 U P "O5'" sing N N 145 U OP2 HOP2 sing N N 146 U "O5'" "C5'" sing N N 147 U "C5'" "C4'" sing N N 148 U "C5'" "H5'" sing N N 149 U "C5'" "H5''" sing N N 150 U "C4'" "O4'" sing N N 151 U "C4'" "C3'" sing N N 152 U "C4'" "H4'" sing N N 153 U "O4'" "C1'" sing N N 154 U "C3'" "O3'" sing N N 155 U "C3'" "C2'" sing N N 156 U "C3'" "H3'" sing N N 157 U "O3'" "HO3'" sing N N 158 U "C2'" "O2'" sing N N 159 U "C2'" "C1'" sing N N 160 U "C2'" "H2'" sing N N 161 U "O2'" "HO2'" sing N N 162 U "C1'" N1 sing N N 163 U "C1'" "H1'" sing N N 164 U N1 C2 sing N N 165 U N1 C6 sing N N 166 U C2 O2 doub N N 167 U C2 N3 sing N N 168 U N3 C4 sing N N 169 U N3 H3 sing N N 170 U C4 O4 doub N N 171 U C4 C5 sing N N 172 U C5 C6 doub N N 173 U C5 H5 sing N N 174 U C6 H6 sing N N 175 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3RG5 'double helix' 3RG5 'a-form double helix' 3RG5 'hairpin loop' 3RG5 'mismatched base pair' 3RG5 'triple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 86 1_555 0.001 -0.033 0.168 -0.190 -4.692 4.184 1 A_G1:C72_A A 1 ? A 72 ? 19 1 1 A C 2 1_555 A G 85 1_555 0.609 -0.266 0.307 5.626 -12.880 4.864 2 A_C2:G71_A A 2 ? A 71 ? 19 1 1 A C 3 1_555 A G 84 1_555 -0.141 -0.222 0.342 -0.261 -14.735 0.577 3 A_C3:G70_A A 3 ? A 70 ? 19 1 1 A C 4 1_555 A G 83 1_555 -0.757 0.157 0.343 2.601 -12.395 8.208 4 A_C4:G69_A A 4 ? A 69 ? 19 1 1 A G 5 1_555 A C 82 1_555 -0.406 -0.064 0.142 1.632 -13.258 4.574 5 A_G5:C68_A A 5 ? A 68 ? 19 1 1 A G 6 1_555 A U 81 1_555 -2.229 -0.679 0.466 11.257 -14.095 0.452 6 A_G5A:U67B_A A 5 A A 67 B 28 1 1 A A 7 1_555 A U 80 1_555 0.275 -0.215 0.509 5.986 -22.313 10.402 7 A_A5B:U67A_A A 5 B A 67 A 20 1 1 A U 8 1_555 A U 79 1_555 1.996 -1.941 0.505 -10.400 -26.972 10.970 8 A_U6:U67_A A 6 ? A 67 ? 16 1 1 A G 9 1_555 A C 78 1_555 -0.694 -0.218 -0.240 -10.091 -9.497 0.310 9 A_G7:C66_A A 7 ? A 66 ? 19 1 1 A G 63 1_555 A C 77 1_555 -0.388 -0.124 -0.164 -15.646 -11.095 0.010 10 A_G50:C64_A A 50 ? A 64 ? 19 1 1 A U 64 1_555 A A 76 1_555 0.036 -0.214 0.223 -10.765 -5.361 -0.482 11 A_U51:A63_A A 51 ? A 63 ? 20 1 1 A G 65 1_555 A C 75 1_555 -0.222 -0.192 0.077 -3.126 -7.811 -1.821 12 A_G52:C62_A A 52 ? A 62 ? 19 1 1 A G 66 1_555 A C 74 1_555 -0.260 -0.155 0.239 -5.487 -6.770 2.861 13 A_G53:C61_A A 53 ? A 61 ? 19 1 1 A U 67 1_555 A A 71 1_555 4.351 -2.127 0.087 -5.125 4.873 -101.431 14 A_U54:A58_A A 54 ? A 58 ? 24 4 1 A U 68 1_555 A G 19 1_555 0.613 -5.382 0.354 20.145 8.632 -95.193 15 A_U55:G18_A A 55 ? A 18 ? ? 2 1 A A 39 1_555 A U 35 1_555 0.152 1.519 0.274 16.391 13.100 162.750 16 A_A37:U33_A A 37 ? A 33 ? 21 2 1 A A 40 1_555 A C 34 1_555 -5.278 -1.057 0.058 -0.364 -7.847 8.878 17 A_A38:C32_A A 38 ? A 32 ? ? ? 1 A C 41 1_555 A G 33 1_555 0.149 -0.164 -0.151 11.488 -15.268 -1.135 18 A_C39:G31_A A 39 ? A 31 ? 19 1 1 A C 42 1_555 A G 32 1_555 0.219 -0.088 0.330 3.346 -19.380 -0.797 19 A_C40:G30_A A 40 ? A 30 ? 19 1 1 A U 43 1_555 A A 31 1_555 0.090 -0.109 0.220 0.678 -13.428 -3.058 20 A_U41:A29_A A 41 ? A 29 ? 20 1 1 A G 44 1_555 A C 30 1_555 -0.421 -0.163 0.131 -2.297 -19.347 -0.528 21 A_G42:C28_A A 42 ? A 28 ? 19 1 1 A U 45 1_555 A G 29 1_555 2.420 -0.642 0.186 -2.102 -20.245 2.019 22 A_U43:G27_A A 43 ? A 27 ? 28 1 1 A A 46 1_555 A U 28 1_555 0.188 -0.287 0.266 5.737 -10.979 0.647 23 A_A44:U26_A A 44 ? A 26 ? 20 1 1 A C 12 1_555 A G 27 1_555 0.342 -0.139 -0.105 16.057 -12.098 1.477 24 A_C10:G25_A A 10 ? A 25 ? 19 1 1 A C 13 1_555 A G 26 1_555 0.291 -0.224 -0.295 1.574 -9.229 0.115 25 A_C11:G24_A A 11 ? A 24 ? 19 1 1 A U 14 1_555 A G 25 1_555 2.263 -0.546 -0.110 -1.210 -8.506 -1.536 26 A_U12:G23_A A 12 ? A 23 ? 28 1 1 A C 15 1_555 A G 24 1_555 0.184 -0.175 -0.124 -0.098 -12.546 0.005 27 A_C13:G22_A A 13 ? A 22 ? 19 1 1 A A 16 1_555 A U 23 1_555 0.005 -0.045 0.140 0.611 -6.021 1.478 28 A_A14:U21_A A 14 ? A 21 ? 20 1 1 A G 17 1_555 A C 22 1_555 -0.283 -0.200 0.066 -6.071 -11.217 1.503 29 A_G15:C20A_A A 15 ? A 20 A 19 1 1 A U 18 1_555 A U 72 1_555 2.368 3.373 0.466 2.991 8.396 174.122 30 A_U16:U59_A A 16 ? A 59 ? 13 2 1 A G 20 1_555 A C 69 1_555 -0.259 -0.323 -0.021 -21.999 -18.514 -2.918 31 A_G19:C56_A A 19 ? A 56 ? 19 1 1 A C 48 1_555 A G 61 1_555 0.386 -0.202 -0.203 3.180 -18.222 2.861 32 A_C46:G47L_A A 46 ? A 47 L 19 1 1 A U 49 1_555 A A 60 1_555 0.038 -0.159 0.362 -3.497 -9.614 0.525 33 A_U47:A47K_A A 47 ? A 47 K 20 1 1 A G 50 1_555 A C 59 1_555 -0.252 -0.134 -0.082 -8.915 -19.348 0.008 34 A_G47A:C47J_A A 47 A A 47 J 19 1 1 A U 51 1_555 A A 58 1_555 0.085 -0.164 0.106 -11.960 -15.552 1.560 35 A_U47B:A47I_A A 47 B A 47 I 20 1 1 A U 52 1_555 A G 57 1_555 2.835 -0.664 -0.167 -3.737 -4.442 0.892 36 A_U47C:G47H_A A 47 C A 47 H 28 1 1 A U 53 1_555 A C 56 1_555 6.546 -5.066 -0.218 19.328 3.307 -47.252 37 A_U47D:C47G_A A 47 D A 47 G ? 4 1 B G 1 1_555 B C 86 1_555 0.080 -0.278 0.271 -1.023 -7.959 1.252 38 B_G1:C72_B B 1 ? B 72 ? 19 1 1 B C 2 1_555 B G 85 1_555 -0.097 -0.409 0.409 5.629 -13.214 -2.884 39 B_C2:G71_B B 2 ? B 71 ? 19 1 1 B C 3 1_555 B G 84 1_555 -0.466 -0.183 0.123 3.303 -10.915 -1.287 40 B_C3:G70_B B 3 ? B 70 ? 19 1 1 B C 4 1_555 B G 83 1_555 -0.399 -0.239 -0.029 2.786 -9.824 -4.215 41 B_C4:G69_B B 4 ? B 69 ? 19 1 1 B G 5 1_555 B C 82 1_555 -0.110 -0.146 -0.078 0.789 -13.274 -4.397 42 B_G5:C68_B B 5 ? B 68 ? 19 1 1 B G 6 1_555 B U 81 1_555 -2.286 -0.455 0.175 6.217 -14.241 3.752 43 B_G5A:U67B_B B 5 A B 67 B 28 1 1 B A 7 1_555 B U 80 1_555 0.084 -0.028 0.001 2.675 -20.786 9.927 44 B_A5B:U67A_B B 5 B B 67 A 20 1 1 B U 8 1_555 B U 79 1_555 2.382 -1.696 0.593 -4.747 -23.213 13.379 45 B_U6:U67_B B 6 ? B 67 ? 16 1 1 B G 9 1_555 B C 78 1_555 -0.118 -0.193 0.003 -2.547 -11.507 1.979 46 B_G7:C66_B B 7 ? B 66 ? 19 1 1 B G 63 1_555 B C 77 1_555 -0.250 -0.124 0.005 -15.303 -13.760 2.014 47 B_G50:C64_B B 50 ? B 64 ? 19 1 1 B U 64 1_555 B A 76 1_555 -0.213 -0.131 0.458 -11.475 -4.394 1.225 48 B_U51:A63_B B 51 ? B 63 ? 20 1 1 B G 65 1_555 B C 75 1_555 -0.231 -0.216 0.214 -4.007 -9.909 0.790 49 B_G52:C62_B B 52 ? B 62 ? 19 1 1 B G 66 1_555 B C 74 1_555 -0.327 -0.434 0.305 -5.869 -11.215 -0.231 50 B_G53:C61_B B 53 ? B 61 ? 19 1 1 B U 67 1_555 B A 71 1_555 4.431 -2.397 0.561 -4.238 8.627 -99.069 51 B_U54:A58_B B 54 ? B 58 ? 24 4 1 B U 68 1_555 B G 19 1_555 0.639 -5.475 0.304 21.604 4.318 -89.718 52 B_U55:G18_B B 55 ? B 18 ? ? 2 1 B A 39 1_555 B U 35 1_555 -6.097 -3.530 -0.609 -20.979 -3.957 -48.311 53 B_A37:U33_B B 37 ? B 33 ? ? ? 1 B A 40 1_555 B C 34 1_555 -2.498 -0.498 0.287 4.167 -14.919 3.447 54 B_A38:C32_B B 38 ? B 32 ? ? ? 1 B C 41 1_555 B G 33 1_555 0.394 -0.192 -0.121 8.787 -16.303 -0.034 55 B_C39:G31_B B 39 ? B 31 ? 19 1 1 B C 42 1_555 B G 32 1_555 0.240 -0.194 0.103 6.500 -19.000 -0.407 56 B_C40:G30_B B 40 ? B 30 ? 19 1 1 B U 43 1_555 B A 31 1_555 -0.163 -0.165 0.132 4.432 -14.961 -1.291 57 B_U41:A29_B B 41 ? B 29 ? 20 1 1 B G 44 1_555 B C 30 1_555 -0.300 -0.221 -0.054 -6.065 -21.295 1.267 58 B_G42:C28_B B 42 ? B 28 ? 19 1 1 B U 45 1_555 B G 29 1_555 2.416 -0.623 0.296 -6.903 -19.584 2.502 59 B_U43:G27_B B 43 ? B 27 ? 28 1 1 B A 46 1_555 B U 28 1_555 -0.008 -0.212 0.308 1.347 -11.559 3.087 60 B_A44:U26_B B 44 ? B 26 ? 20 1 1 B C 12 1_555 B G 27 1_555 0.329 -0.322 0.042 7.959 -4.725 -2.728 61 B_C10:G25_B B 10 ? B 25 ? 19 1 1 B C 13 1_555 B G 26 1_555 0.107 -0.252 -0.245 7.726 -10.741 -1.114 62 B_C11:G24_B B 11 ? B 24 ? 19 1 1 B U 14 1_555 B G 25 1_555 2.271 -0.675 -0.302 3.679 -12.144 -2.570 63 B_U12:G23_B B 12 ? B 23 ? 28 1 1 B C 15 1_555 B G 24 1_555 0.192 -0.130 -0.277 -0.511 -11.975 3.323 64 B_C13:G22_B B 13 ? B 22 ? 19 1 1 B A 16 1_555 B U 23 1_555 0.196 0.016 0.421 0.379 -9.204 3.286 65 B_A14:U21_B B 14 ? B 21 ? 20 1 1 B G 17 1_555 B C 22 1_555 -0.197 -0.200 -0.048 -4.348 -12.696 1.875 66 B_G15:C20A_B B 15 ? B 20 A 19 1 1 B U 18 1_555 B U 72 1_555 2.271 3.217 0.147 13.013 6.440 176.408 67 B_U16:U59_B B 16 ? B 59 ? 13 2 1 B G 20 1_555 B C 69 1_555 0.110 -0.241 0.033 -18.136 -14.646 -1.629 68 B_G19:C56_B B 19 ? B 56 ? 19 1 1 B G 47 1_555 B A 62 1_555 -0.163 1.339 0.501 -14.202 24.613 -8.302 69 B_G45:A48_B B 45 ? B 48 ? 8 1 1 B C 48 1_555 B G 61 1_555 0.350 -0.195 0.063 -10.648 -7.166 1.233 70 B_C46:G47L_B B 46 ? B 47 L 19 1 1 B U 49 1_555 B A 60 1_555 -0.075 -0.257 -0.033 -3.472 -6.365 1.227 71 B_U47:A47K_B B 47 ? B 47 K 20 1 1 B G 50 1_555 B C 59 1_555 -0.131 -0.211 -0.107 -5.736 -15.685 0.389 72 B_G47A:C47J_B B 47 A B 47 J 19 1 1 B U 51 1_555 B A 58 1_555 0.223 -0.201 -0.116 -6.585 -10.342 4.320 73 B_U47B:A47I_B B 47 B B 47 I 20 1 1 B U 52 1_555 B G 57 1_555 2.515 -0.674 -0.106 -4.324 -1.591 -0.185 74 B_U47C:G47H_B B 47 C B 47 H 28 1 1 B U 53 1_555 B C 56 1_555 6.970 -5.996 0.236 19.780 8.560 -34.115 75 B_U47D:C47G_B B 47 D B 47 G ? 4 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 86 1_555 A C 2 1_555 A G 85 1_555 -0.082 -1.487 3.168 -2.694 3.235 36.566 -2.774 -0.218 3.029 5.135 4.275 36.799 1 AA_G1C2:G71C72_AA A 1 ? A 72 ? A 2 ? A 71 ? 1 A C 2 1_555 A G 85 1_555 A C 3 1_555 A G 84 1_555 -0.150 -1.777 3.287 -1.908 3.991 28.151 -4.495 -0.118 3.015 8.141 3.893 28.489 2 AA_C2C3:G70G71_AA A 2 ? A 71 ? A 3 ? A 70 ? 1 A C 3 1_555 A G 84 1_555 A C 4 1_555 A G 83 1_555 0.125 -1.728 3.077 -0.654 3.951 29.707 -4.080 -0.365 2.826 7.663 1.267 29.970 3 AA_C3C4:G69G70_AA A 3 ? A 70 ? A 4 ? A 69 ? 1 A C 4 1_555 A G 83 1_555 A G 5 1_555 A C 82 1_555 -0.229 -1.601 3.253 -0.865 8.108 30.272 -4.393 0.272 2.748 15.183 1.619 31.326 4 AA_C4G5:C68G69_AA A 4 ? A 69 ? A 5 ? A 68 ? 1 A G 5 1_555 A C 82 1_555 A G 6 1_555 A U 81 1_555 0.087 -1.916 2.867 -3.852 1.185 22.906 -5.105 -1.355 2.714 2.953 9.605 23.253 5 AA_G5G5A:U67BC68_AA A 5 ? A 68 ? A 5 A A 67 B 1 A G 6 1_555 A U 81 1_555 A A 7 1_555 A U 80 1_555 0.522 -1.307 3.291 -1.949 4.596 42.246 -2.259 -0.913 3.112 6.349 2.692 42.526 6 AA_G5AA5B:U67AU67B_AA A 5 A A 67 B A 5 B A 67 A 1 A A 7 1_555 A U 80 1_555 A U 8 1_555 A U 79 1_555 0.516 -1.393 3.637 4.827 5.203 43.145 -2.417 -0.186 3.489 7.019 -6.511 43.698 7 AA_A5BU6:U67U67A_AA A 5 B A 67 A A 6 ? A 67 ? 1 A U 8 1_555 A U 79 1_555 A G 9 1_555 A C 78 1_555 -0.478 -1.514 2.697 11.573 21.857 23.335 -4.818 1.996 0.748 41.812 -22.139 33.877 8 AA_U6G7:C66U67_AA A 6 ? A 67 ? A 7 ? A 66 ? 1 A G 9 1_555 A C 78 1_555 A G 63 1_555 A C 77 1_555 -0.650 -1.986 3.365 1.821 6.910 40.386 -3.572 1.122 2.970 9.915 -2.613 40.987 9 AA_G7G50:C64C66_AA A 7 ? A 66 ? A 50 ? A 64 ? 1 A G 63 1_555 A C 77 1_555 A U 64 1_555 A A 76 1_555 -0.747 -1.803 3.219 -2.813 -0.490 33.139 -3.069 0.836 3.295 -0.858 4.920 33.259 10 AA_G50U51:A63C64_AA A 50 ? A 64 ? A 51 ? A 63 ? 1 A U 64 1_555 A A 76 1_555 A G 65 1_555 A C 75 1_555 0.600 -1.877 3.050 2.320 3.498 24.238 -5.376 -0.765 2.799 8.252 -5.473 24.593 11 AA_U51G52:C62A63_AA A 51 ? A 63 ? A 52 ? A 62 ? 1 A G 65 1_555 A C 75 1_555 A G 66 1_555 A C 74 1_555 0.686 -2.156 3.227 0.354 -0.577 34.886 -3.510 -1.091 3.267 -0.962 -0.590 34.893 12 AA_G52G53:C61C62_AA A 52 ? A 62 ? A 53 ? A 61 ? 1 A G 66 1_555 A C 74 1_555 A U 67 1_555 A A 71 1_555 -2.255 -2.139 3.241 6.396 1.546 88.568 -1.560 1.741 3.077 1.106 -4.575 88.761 13 AA_G53U54:A58C61_AA A 53 ? A 61 ? A 54 ? A 58 ? 1 A U 67 1_555 A A 71 1_555 A U 68 1_555 A G 19 1_555 2.181 -1.885 3.383 9.421 4.442 38.678 -3.306 -2.019 3.568 6.563 -13.919 40.004 14 AA_U54U55:G18A58_AA A 54 ? A 58 ? A 55 ? A 18 ? 1 A A 39 1_555 A U 35 1_555 A A 40 1_555 A C 34 1_555 0.134 -3.609 4.591 135.010 -95.408 117.413 -1.032 1.032 5.064 -48.315 -68.370 172.390 15 AA_A37A38:C32U33_AA A 37 ? A 33 ? A 38 ? A 32 ? 1 A A 40 1_555 A C 34 1_555 A C 41 1_555 A G 33 1_555 0.050 -1.181 3.138 2.122 0.289 49.080 -1.441 0.093 3.131 0.348 -2.553 49.124 16 AA_A38C39:G31C32_AA A 38 ? A 32 ? A 39 ? A 31 ? 1 A C 41 1_555 A G 33 1_555 A C 42 1_555 A G 32 1_555 -0.355 -1.955 3.450 -3.916 5.471 31.379 -4.533 -0.070 3.095 9.972 7.137 32.074 17 AA_C39C40:G30G31_AA A 39 ? A 31 ? A 40 ? A 30 ? 1 A C 42 1_555 A G 32 1_555 A U 43 1_555 A A 31 1_555 -0.508 -1.187 3.245 -1.624 7.877 33.258 -3.208 0.618 2.917 13.517 2.786 34.190 18 AA_C40U41:A29G30_AA A 40 ? A 30 ? A 41 ? A 29 ? 1 A U 43 1_555 A A 31 1_555 A G 44 1_555 A C 30 1_555 0.354 -1.462 3.077 0.658 12.070 31.867 -4.163 -0.513 2.389 21.059 -1.148 34.027 19 AA_U41G42:C28A29_AA A 41 ? A 29 ? A 42 ? A 28 ? 1 A G 44 1_555 A C 30 1_555 A U 45 1_555 A G 29 1_555 0.125 -1.125 3.279 0.592 2.515 43.119 -1.773 -0.112 3.213 3.418 -0.804 43.193 20 AA_G42U43:G27C28_AA A 42 ? A 28 ? A 43 ? A 27 ? 1 A U 45 1_555 A G 29 1_555 A A 46 1_555 A U 28 1_555 -0.296 -1.216 2.771 3.813 13.184 26.801 -4.401 1.165 1.917 26.361 -7.624 30.054 21 AA_U43A44:U26G27_AA A 43 ? A 27 ? A 44 ? A 26 ? 1 A A 46 1_555 A U 28 1_555 A C 12 1_555 A G 27 1_555 0.137 -1.108 3.020 3.570 6.691 32.840 -2.885 0.284 2.747 11.643 -6.212 33.681 22 AA_A44C10:G25U26_AA A 44 ? A 26 ? A 10 ? A 25 ? 1 A C 12 1_555 A G 27 1_555 A C 13 1_555 A G 26 1_555 -0.336 -2.210 3.506 -0.541 10.282 33.565 -5.175 0.478 2.736 17.304 0.910 35.065 23 AA_C10C11:G24G25_AA A 10 ? A 25 ? A 11 ? A 24 ? 1 A C 13 1_555 A G 26 1_555 A U 14 1_555 A G 25 1_555 -0.085 -1.603 3.329 1.303 7.605 38.785 -3.241 0.275 2.970 11.315 -1.939 39.516 24 AA_C11U12:G23G24_AA A 11 ? A 24 ? A 12 ? A 23 ? 1 A U 14 1_555 A G 25 1_555 A C 15 1_555 A G 24 1_555 0.288 -1.731 3.018 7.089 9.717 24.613 -5.686 0.869 2.188 21.249 -15.503 27.354 25 AA_U12C13:G22G23_AA A 12 ? A 23 ? A 13 ? A 22 ? 1 A C 15 1_555 A G 24 1_555 A A 16 1_555 A U 23 1_555 1.002 -1.820 3.181 0.988 7.241 27.013 -5.324 -1.860 2.647 15.152 -2.067 27.966 26 AA_C13A14:U21G22_AA A 13 ? A 22 ? A 14 ? A 21 ? 1 A A 16 1_555 A U 23 1_555 A G 17 1_555 A C 22 1_555 0.605 -2.266 3.414 3.184 5.644 28.602 -5.681 -0.516 2.970 11.243 -6.342 29.312 27 AA_A14G15:C20AU21_AA A 14 ? A 21 ? A 15 ? A 20 A 1 A G 17 1_555 A C 22 1_555 A U 18 1_555 A U 72 1_555 0.604 -0.755 2.896 -1.612 -3.073 -41.063 1.364 0.705 2.855 4.371 -2.293 -41.203 28 AA_G15U16:U59C20A_AA A 15 ? A 20 A A 16 ? A 59 ? 1 A C 48 1_555 A G 61 1_555 A U 49 1_555 A A 60 1_555 -0.172 -1.179 3.447 -6.701 16.157 31.690 -4.149 -0.653 2.555 27.155 11.263 36.088 29 AA_C46U47:A47KG47L_AA A 46 ? A 47 L A 47 ? A 47 K 1 A U 49 1_555 A A 60 1_555 A G 50 1_555 A C 59 1_555 0.446 -1.591 3.220 4.467 11.776 29.829 -4.749 -0.085 2.471 21.700 -8.231 32.323 30 AA_U47G47A:C47JA47K_AA A 47 ? A 47 K A 47 A A 47 J 1 A G 50 1_555 A C 59 1_555 A U 51 1_555 A A 58 1_555 0.092 -1.599 3.333 0.340 4.645 33.882 -3.444 -0.104 3.094 7.923 -0.579 34.192 31 AA_G47AU47B:A47IC47J_AA A 47 A A 47 J A 47 B A 47 I 1 A U 51 1_555 A A 58 1_555 A U 52 1_555 A G 57 1_555 0.518 -1.454 3.035 6.724 2.413 43.819 -2.133 -0.108 2.999 3.208 -8.939 44.369 32 AA_U47BU47C:G47HA47I_AA A 47 B A 47 I A 47 C A 47 H 1 A U 52 1_555 A G 57 1_555 A U 53 1_555 A C 56 1_555 -3.126 -1.843 2.882 2.756 0.957 38.230 -2.906 5.050 2.614 1.458 -4.201 38.337 33 AA_U47CU47D:C47GG47H_AA A 47 C A 47 H A 47 D A 47 G 1 B G 1 1_555 B C 86 1_555 B C 2 1_555 B G 85 1_555 0.075 -2.153 3.087 -2.507 -2.199 32.919 -3.422 -0.539 3.206 -3.868 4.409 33.083 34 BB_G1C2:G71C72_BB B 1 ? B 72 ? B 2 ? B 71 ? 1 B C 2 1_555 B G 85 1_555 B C 3 1_555 B G 84 1_555 -0.390 -2.309 3.150 -0.778 5.144 27.033 -5.989 0.649 2.683 10.877 1.644 27.520 35 BB_C2C3:G70G71_BB B 2 ? B 71 ? B 3 ? B 70 ? 1 B C 3 1_555 B G 84 1_555 B C 4 1_555 B G 83 1_555 -0.435 -1.879 3.290 -0.477 2.703 33.650 -3.667 0.672 3.140 4.660 0.823 33.758 36 BB_C3C4:G69G70_BB B 3 ? B 70 ? B 4 ? B 69 ? 1 B C 4 1_555 B G 83 1_555 B G 5 1_555 B C 82 1_555 -0.083 -1.777 3.381 0.008 8.816 30.723 -4.767 0.153 2.777 16.225 -0.015 31.933 37 BB_C4G5:C68G69_BB B 4 ? B 69 ? B 5 ? B 68 ? 1 B G 5 1_555 B C 82 1_555 B G 6 1_555 B U 81 1_555 0.647 -1.937 2.947 -3.227 6.957 24.329 -5.998 -2.213 2.214 16.007 7.425 25.492 38 BB_G5G5A:U67BC68_BB B 5 ? B 68 ? B 5 A B 67 B 1 B G 6 1_555 B U 81 1_555 B A 7 1_555 B U 80 1_555 0.234 -1.210 3.414 -0.028 4.123 38.340 -2.355 -0.358 3.271 6.256 0.042 38.553 39 BB_G5AA5B:U67AU67B_BB B 5 A B 67 B B 5 B B 67 A 1 B A 7 1_555 B U 80 1_555 B U 8 1_555 B U 79 1_555 0.542 -1.116 3.464 0.219 8.017 44.865 -2.169 -0.681 3.231 10.405 -0.284 45.540 40 BB_A5BU6:U67U67A_BB B 5 B B 67 A B 6 ? B 67 ? 1 B U 8 1_555 B U 79 1_555 B G 9 1_555 B C 78 1_555 -1.001 -1.115 2.926 11.702 18.220 28.187 -3.851 2.941 1.457 32.096 -20.614 35.410 41 BB_U6G7:C66U67_BB B 6 ? B 67 ? B 7 ? B 66 ? 1 B G 9 1_555 B C 78 1_555 B G 63 1_555 B C 77 1_555 0.505 -2.296 3.514 1.472 8.136 28.533 -6.166 -0.681 2.789 16.085 -2.910 29.683 42 BB_G7G50:C64C66_BB B 7 ? B 66 ? B 50 ? B 64 ? 1 B G 63 1_555 B C 77 1_555 B U 64 1_555 B A 76 1_555 -0.430 -1.670 3.186 -3.975 1.061 31.711 -3.219 0.080 3.159 1.931 7.236 31.970 43 BB_G50U51:A63C64_BB B 50 ? B 64 ? B 51 ? B 63 ? 1 B U 64 1_555 B A 76 1_555 B G 65 1_555 B C 75 1_555 0.634 -1.792 2.910 3.288 2.152 29.884 -3.833 -0.629 2.829 4.151 -6.342 30.135 44 BB_U51G52:C62A63_BB B 51 ? B 63 ? B 52 ? B 62 ? 1 B G 65 1_555 B C 75 1_555 B G 66 1_555 B C 74 1_555 0.457 -2.331 3.143 2.976 1.759 32.382 -4.448 -0.323 3.044 3.143 -5.317 32.561 45 BB_G52G53:C61C62_BB B 52 ? B 62 ? B 53 ? B 61 ? 1 B G 66 1_555 B C 74 1_555 B U 67 1_555 B A 71 1_555 -2.022 -2.159 3.300 3.574 1.338 90.052 -1.552 1.500 3.210 0.946 -2.525 90.115 46 BB_G53U54:A58C61_BB B 53 ? B 61 ? B 54 ? B 58 ? 1 B U 67 1_555 B A 71 1_555 B U 68 1_555 B G 19 1_555 2.157 -2.000 3.190 8.324 1.580 37.824 -3.217 -2.198 3.486 2.401 -12.648 38.727 47 BB_U54U55:G18A58_BB B 54 ? B 58 ? B 55 ? B 18 ? 1 B A 39 1_555 B U 35 1_555 B A 40 1_555 B C 34 1_555 3.973 -0.955 2.848 -5.899 2.419 35.907 -1.784 -6.978 2.124 3.886 9.477 36.450 48 BB_A37A38:C32U33_BB B 37 ? B 33 ? B 38 ? B 32 ? 1 B A 40 1_555 B C 34 1_555 B C 41 1_555 B G 33 1_555 -0.206 -1.154 3.227 0.301 0.404 44.964 -1.544 0.297 3.215 0.529 -0.394 44.967 49 BB_A38C39:G31C32_BB B 38 ? B 32 ? B 39 ? B 31 ? 1 B C 41 1_555 B G 33 1_555 B C 42 1_555 B G 32 1_555 -0.876 -2.073 3.300 -4.649 8.367 26.984 -5.977 0.784 2.661 17.257 9.589 28.602 50 BB_C39C40:G30G31_BB B 39 ? B 31 ? B 40 ? B 30 ? 1 B C 42 1_555 B G 32 1_555 B U 43 1_555 B A 31 1_555 -0.502 -1.208 3.285 -3.951 4.997 30.803 -3.152 0.197 3.094 9.284 7.340 31.439 51 BB_C40U41:A29G30_BB B 40 ? B 30 ? B 41 ? B 29 ? 1 B U 43 1_555 B A 31 1_555 B G 44 1_555 B C 30 1_555 0.531 -1.467 3.326 1.641 15.696 33.415 -4.296 -0.634 2.440 25.599 -2.677 36.858 52 BB_U41G42:C28A29_BB B 41 ? B 29 ? B 42 ? B 28 ? 1 B G 44 1_555 B C 30 1_555 B U 45 1_555 B G 29 1_555 0.232 -1.155 3.305 -0.347 4.002 43.128 -1.953 -0.347 3.189 5.430 0.471 43.306 53 BB_G42U43:G27C28_BB B 42 ? B 28 ? B 43 ? B 27 ? 1 B U 45 1_555 B G 29 1_555 B A 46 1_555 B U 28 1_555 -0.021 -1.560 2.630 3.339 14.453 25.458 -5.192 0.531 1.527 29.789 -6.882 29.402 54 BB_U43A44:U26G27_BB B 43 ? B 27 ? B 44 ? B 26 ? 1 B A 46 1_555 B U 28 1_555 B C 12 1_555 B G 27 1_555 -1.201 -1.288 3.185 2.624 12.213 32.259 -3.858 2.386 2.449 21.023 -4.516 34.533 55 BB_A44C10:G25U26_BB B 44 ? B 26 ? B 10 ? B 25 ? 1 B C 12 1_555 B G 27 1_555 B C 13 1_555 B G 26 1_555 -0.178 -1.985 3.288 -0.986 7.716 30.823 -4.948 0.157 2.728 14.234 1.818 31.767 56 BB_C10C11:G24G25_BB B 10 ? B 25 ? B 11 ? B 24 ? 1 B C 13 1_555 B G 26 1_555 B U 14 1_555 B G 25 1_555 0.157 -1.538 3.413 4.133 8.015 41.289 -2.962 0.208 3.076 11.205 -5.779 42.221 57 BB_C11U12:G23G24_BB B 11 ? B 24 ? B 12 ? B 23 ? 1 B U 14 1_555 B G 25 1_555 B C 15 1_555 B G 24 1_555 0.384 -2.114 3.239 6.805 9.678 22.804 -7.172 0.831 2.198 22.627 -15.909 25.654 58 BB_U12C13:G22G23_BB B 12 ? B 23 ? B 13 ? B 22 ? 1 B C 15 1_555 B G 24 1_555 B A 16 1_555 B U 23 1_555 0.592 -1.906 3.095 -2.307 7.405 27.083 -5.416 -1.683 2.440 15.415 4.803 28.151 59 BB_C13A14:U21G22_BB B 13 ? B 22 ? B 14 ? B 21 ? 1 B A 16 1_555 B U 23 1_555 B G 17 1_555 B C 22 1_555 0.144 -2.328 3.337 3.526 4.624 30.718 -5.173 0.381 2.961 8.632 -6.582 31.251 60 BB_A14G15:C20AU21_BB B 14 ? B 21 ? B 15 ? B 20 A 1 B G 17 1_555 B C 22 1_555 B U 18 1_555 B U 72 1_555 0.504 -0.679 3.130 -0.756 -1.576 -43.890 1.050 0.605 3.112 2.108 -1.011 -43.923 61 BB_G15U16:U59C20A_BB B 15 ? B 20 A B 16 ? B 59 ? 1 B G 47 1_555 B A 62 1_555 B C 48 1_555 B G 61 1_555 0.357 -1.516 3.783 -1.089 23.795 28.385 -5.627 -0.711 1.963 40.661 1.860 36.897 62 BB_G45C46:G47LA48_BB B 45 ? B 48 ? B 46 ? B 47 L 1 B C 48 1_555 B G 61 1_555 B U 49 1_555 B A 60 1_555 -0.025 -1.170 3.171 0.175 11.327 29.817 -4.008 0.074 2.566 21.079 -0.326 31.851 63 BB_C46U47:A47KG47L_BB B 46 ? B 47 L B 47 ? B 47 K 1 B U 49 1_555 B A 60 1_555 B G 50 1_555 B C 59 1_555 0.489 -1.307 3.258 2.379 16.825 30.596 -4.493 -0.488 2.284 29.227 -4.133 34.899 64 BB_U47G47A:C47JA47K_BB B 47 ? B 47 K B 47 A B 47 J 1 B G 50 1_555 B C 59 1_555 B U 51 1_555 B A 58 1_555 0.950 -1.603 3.371 3.617 11.701 30.160 -4.832 -1.089 2.674 21.411 -6.617 32.499 65 BB_G47AU47B:A47IC47J_BB B 47 A B 47 J B 47 B B 47 I 1 B U 51 1_555 B A 58 1_555 B U 52 1_555 B G 57 1_555 0.221 -1.297 3.282 4.186 6.535 39.893 -2.579 0.137 3.048 9.469 -6.066 40.611 66 BB_U47BU47C:G47HA47I_BB B 47 B B 47 I B 47 C B 47 H 1 B U 52 1_555 B G 57 1_555 B U 53 1_555 B C 56 1_555 -2.869 -1.391 2.695 -0.539 1.980 46.294 -1.906 3.609 2.668 2.517 0.685 46.337 67 BB_U47CU47D:C47GG47H_BB B 47 C B 47 H B 47 D B 47 G # _pdbx_initial_refinement_model.accession_code 3A3A _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.details 'human tRNA(Sec)' # _atom_sites.entry_id 3RG5 _atom_sites.fract_transf_matrix[1][1] 0.020462 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005506 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010411 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014415 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_