data_3RGQ # _entry.id 3RGQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3RGQ pdb_00003rgq 10.2210/pdb3rgq/pdb RCSB RCSB064910 ? ? WWPDB D_1000064910 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-07-06 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-07-20 4 'Structure model' 1 3 2011-08-03 5 'Structure model' 1 4 2017-11-08 6 'Structure model' 1 5 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Refinement description' 5 6 'Structure model' 'Data collection' 6 6 'Structure model' 'Database references' 7 6 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' software 2 6 'Structure model' chem_comp_atom 3 6 'Structure model' chem_comp_bond 4 6 'Structure model' database_2 5 6 'Structure model' struct_ref_seq_dif 6 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 6 'Structure model' '_database_2.pdbx_DOI' 2 6 'Structure model' '_database_2.pdbx_database_accession' 3 6 'Structure model' '_struct_ref_seq_dif.details' 4 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 3RGQ _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-04-08 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3RGO _pdbx_database_related.details 'apo structure' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Xiao, J.' 1 'Engel, J.L.' 2 # _citation.id primary _citation.title 'Structural and functional analysis of PTPMT1, a phosphatase required for cardiolipin synthesis.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 108 _citation.page_first 11860 _citation.page_last 11865 _citation.year 2011 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21730175 _citation.pdbx_database_id_DOI 10.1073/pnas.1109290108 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Xiao, J.' 1 ? primary 'Engel, J.L.' 2 ? primary 'Zhang, J.' 3 ? primary 'Chen, M.J.' 4 ? primary 'Manning, G.' 5 ? primary 'Dixon, J.E.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein-tyrosine phosphatase mitochondrial 1' 17782.557 1 '3.1.3.16, 3.1.3.48' C200S ? ? 2 non-polymer syn ;(2R)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5S,6R)-2,3,4,6-tetrahydroxy-5-(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dibutanoate ; 554.374 1 ? ? ? ? 3 water nat water 18.015 141 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PTEN-like phosphatase, Phosphoinositide lipid phosphatase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DWYHRIDHTVLLGALPLKNMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLRLSTVDMTGVPTLANLHKGV QFALKYQALGQCVYVHSKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPSQLEVLKEFHKEITARAA ; _entity_poly.pdbx_seq_one_letter_code_can ;DWYHRIDHTVLLGALPLKNMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLRLSTVDMTGVPTLANLHKGV QFALKYQALGQCVYVHSKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPSQLEVLKEFHKEITARAA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;(2R)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5S,6R)-2,3,4,6-tetrahydroxy-5-(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dibutanoate ; 5P5 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 TRP n 1 3 TYR n 1 4 HIS n 1 5 ARG n 1 6 ILE n 1 7 ASP n 1 8 HIS n 1 9 THR n 1 10 VAL n 1 11 LEU n 1 12 LEU n 1 13 GLY n 1 14 ALA n 1 15 LEU n 1 16 PRO n 1 17 LEU n 1 18 LYS n 1 19 ASN n 1 20 MET n 1 21 THR n 1 22 ARG n 1 23 ARG n 1 24 LEU n 1 25 VAL n 1 26 LEU n 1 27 ASP n 1 28 GLU n 1 29 ASN n 1 30 VAL n 1 31 ARG n 1 32 GLY n 1 33 VAL n 1 34 ILE n 1 35 THR n 1 36 MET n 1 37 ASN n 1 38 GLU n 1 39 GLU n 1 40 TYR n 1 41 GLU n 1 42 THR n 1 43 ARG n 1 44 PHE n 1 45 LEU n 1 46 CYS n 1 47 ASN n 1 48 THR n 1 49 SER n 1 50 LYS n 1 51 GLU n 1 52 TRP n 1 53 LYS n 1 54 LYS n 1 55 ALA n 1 56 GLY n 1 57 VAL n 1 58 GLU n 1 59 GLN n 1 60 LEU n 1 61 ARG n 1 62 LEU n 1 63 SER n 1 64 THR n 1 65 VAL n 1 66 ASP n 1 67 MET n 1 68 THR n 1 69 GLY n 1 70 VAL n 1 71 PRO n 1 72 THR n 1 73 LEU n 1 74 ALA n 1 75 ASN n 1 76 LEU n 1 77 HIS n 1 78 LYS n 1 79 GLY n 1 80 VAL n 1 81 GLN n 1 82 PHE n 1 83 ALA n 1 84 LEU n 1 85 LYS n 1 86 TYR n 1 87 GLN n 1 88 ALA n 1 89 LEU n 1 90 GLY n 1 91 GLN n 1 92 CYS n 1 93 VAL n 1 94 TYR n 1 95 VAL n 1 96 HIS n 1 97 SER n 1 98 LYS n 1 99 ALA n 1 100 GLY n 1 101 ARG n 1 102 SER n 1 103 ARG n 1 104 SER n 1 105 ALA n 1 106 THR n 1 107 MET n 1 108 VAL n 1 109 ALA n 1 110 ALA n 1 111 TYR n 1 112 LEU n 1 113 ILE n 1 114 GLN n 1 115 VAL n 1 116 HIS n 1 117 ASN n 1 118 TRP n 1 119 SER n 1 120 PRO n 1 121 GLU n 1 122 GLU n 1 123 ALA n 1 124 ILE n 1 125 GLU n 1 126 ALA n 1 127 ILE n 1 128 ALA n 1 129 LYS n 1 130 ILE n 1 131 ARG n 1 132 SER n 1 133 HIS n 1 134 ILE n 1 135 SER n 1 136 ILE n 1 137 ARG n 1 138 PRO n 1 139 SER n 1 140 GLN n 1 141 LEU n 1 142 GLU n 1 143 VAL n 1 144 LEU n 1 145 LYS n 1 146 GLU n 1 147 PHE n 1 148 HIS n 1 149 LYS n 1 150 GLU n 1 151 ILE n 1 152 THR n 1 153 ALA n 1 154 ARG n 1 155 ALA n 1 156 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Plip, Ptpmt1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5P5 non-polymer . ;(2R)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5S,6R)-2,3,4,6-tetrahydroxy-5-(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dibutanoate ; ? 'C17 H32 O16 P2' 554.374 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 104 104 ASP ASP A . n A 1 2 TRP 2 105 105 TRP TRP A . n A 1 3 TYR 3 106 106 TYR TYR A . n A 1 4 HIS 4 107 107 HIS HIS A . n A 1 5 ARG 5 108 108 ARG ARG A . n A 1 6 ILE 6 109 109 ILE ILE A . n A 1 7 ASP 7 110 110 ASP ASP A . n A 1 8 HIS 8 111 111 HIS HIS A . n A 1 9 THR 9 112 112 THR THR A . n A 1 10 VAL 10 113 113 VAL VAL A . n A 1 11 LEU 11 114 114 LEU LEU A . n A 1 12 LEU 12 115 115 LEU LEU A . n A 1 13 GLY 13 116 116 GLY GLY A . n A 1 14 ALA 14 117 117 ALA ALA A . n A 1 15 LEU 15 118 118 LEU LEU A . n A 1 16 PRO 16 119 119 PRO PRO A . n A 1 17 LEU 17 120 120 LEU LEU A . n A 1 18 LYS 18 121 121 LYS LYS A . n A 1 19 ASN 19 122 122 ASN ASN A . n A 1 20 MET 20 123 123 MET MET A . n A 1 21 THR 21 124 124 THR THR A . n A 1 22 ARG 22 125 125 ARG ARG A . n A 1 23 ARG 23 126 126 ARG ARG A . n A 1 24 LEU 24 127 127 LEU LEU A . n A 1 25 VAL 25 128 128 VAL VAL A . n A 1 26 LEU 26 129 129 LEU LEU A . n A 1 27 ASP 27 130 130 ASP ASP A . n A 1 28 GLU 28 131 131 GLU GLU A . n A 1 29 ASN 29 132 132 ASN ASN A . n A 1 30 VAL 30 133 133 VAL VAL A . n A 1 31 ARG 31 134 134 ARG ARG A . n A 1 32 GLY 32 135 135 GLY GLY A . n A 1 33 VAL 33 136 136 VAL VAL A . n A 1 34 ILE 34 137 137 ILE ILE A . n A 1 35 THR 35 138 138 THR THR A . n A 1 36 MET 36 139 139 MET MET A . n A 1 37 ASN 37 140 140 ASN ASN A . n A 1 38 GLU 38 141 141 GLU GLU A . n A 1 39 GLU 39 142 142 GLU GLU A . n A 1 40 TYR 40 143 143 TYR TYR A . n A 1 41 GLU 41 144 144 GLU GLU A . n A 1 42 THR 42 145 145 THR THR A . n A 1 43 ARG 43 146 146 ARG ARG A . n A 1 44 PHE 44 147 147 PHE PHE A . n A 1 45 LEU 45 148 148 LEU LEU A . n A 1 46 CYS 46 149 149 CYS CYS A . n A 1 47 ASN 47 150 150 ASN ASN A . n A 1 48 THR 48 151 151 THR THR A . n A 1 49 SER 49 152 152 SER SER A . n A 1 50 LYS 50 153 153 LYS LYS A . n A 1 51 GLU 51 154 154 GLU GLU A . n A 1 52 TRP 52 155 155 TRP TRP A . n A 1 53 LYS 53 156 156 LYS LYS A . n A 1 54 LYS 54 157 157 LYS LYS A . n A 1 55 ALA 55 158 158 ALA ALA A . n A 1 56 GLY 56 159 159 GLY GLY A . n A 1 57 VAL 57 160 160 VAL VAL A . n A 1 58 GLU 58 161 161 GLU GLU A . n A 1 59 GLN 59 162 162 GLN GLN A . n A 1 60 LEU 60 163 163 LEU LEU A . n A 1 61 ARG 61 164 164 ARG ARG A . n A 1 62 LEU 62 165 165 LEU LEU A . n A 1 63 SER 63 166 166 SER SER A . n A 1 64 THR 64 167 167 THR THR A . n A 1 65 VAL 65 168 168 VAL VAL A . n A 1 66 ASP 66 169 169 ASP ASP A . n A 1 67 MET 67 170 170 MET MET A . n A 1 68 THR 68 171 171 THR THR A . n A 1 69 GLY 69 172 172 GLY GLY A . n A 1 70 VAL 70 173 173 VAL VAL A . n A 1 71 PRO 71 174 174 PRO PRO A . n A 1 72 THR 72 175 175 THR THR A . n A 1 73 LEU 73 176 176 LEU LEU A . n A 1 74 ALA 74 177 177 ALA ALA A . n A 1 75 ASN 75 178 178 ASN ASN A . n A 1 76 LEU 76 179 179 LEU LEU A . n A 1 77 HIS 77 180 180 HIS HIS A . n A 1 78 LYS 78 181 181 LYS LYS A . n A 1 79 GLY 79 182 182 GLY GLY A . n A 1 80 VAL 80 183 183 VAL VAL A . n A 1 81 GLN 81 184 184 GLN GLN A . n A 1 82 PHE 82 185 185 PHE PHE A . n A 1 83 ALA 83 186 186 ALA ALA A . n A 1 84 LEU 84 187 187 LEU LEU A . n A 1 85 LYS 85 188 188 LYS LYS A . n A 1 86 TYR 86 189 189 TYR TYR A . n A 1 87 GLN 87 190 190 GLN GLN A . n A 1 88 ALA 88 191 191 ALA ALA A . n A 1 89 LEU 89 192 192 LEU LEU A . n A 1 90 GLY 90 193 193 GLY GLY A . n A 1 91 GLN 91 194 194 GLN GLN A . n A 1 92 CYS 92 195 195 CYS CYS A . n A 1 93 VAL 93 196 196 VAL VAL A . n A 1 94 TYR 94 197 197 TYR TYR A . n A 1 95 VAL 95 198 198 VAL VAL A . n A 1 96 HIS 96 199 199 HIS HIS A . n A 1 97 SER 97 200 200 SER SER A . n A 1 98 LYS 98 201 201 LYS LYS A . n A 1 99 ALA 99 202 202 ALA ALA A . n A 1 100 GLY 100 203 203 GLY GLY A . n A 1 101 ARG 101 204 204 ARG ARG A . n A 1 102 SER 102 205 205 SER SER A . n A 1 103 ARG 103 206 206 ARG ARG A . n A 1 104 SER 104 207 207 SER SER A . n A 1 105 ALA 105 208 208 ALA ALA A . n A 1 106 THR 106 209 209 THR THR A . n A 1 107 MET 107 210 210 MET MET A . n A 1 108 VAL 108 211 211 VAL VAL A . n A 1 109 ALA 109 212 212 ALA ALA A . n A 1 110 ALA 110 213 213 ALA ALA A . n A 1 111 TYR 111 214 214 TYR TYR A . n A 1 112 LEU 112 215 215 LEU LEU A . n A 1 113 ILE 113 216 216 ILE ILE A . n A 1 114 GLN 114 217 217 GLN GLN A . n A 1 115 VAL 115 218 218 VAL VAL A . n A 1 116 HIS 116 219 219 HIS HIS A . n A 1 117 ASN 117 220 220 ASN ASN A . n A 1 118 TRP 118 221 221 TRP TRP A . n A 1 119 SER 119 222 222 SER SER A . n A 1 120 PRO 120 223 223 PRO PRO A . n A 1 121 GLU 121 224 224 GLU GLU A . n A 1 122 GLU 122 225 225 GLU GLU A . n A 1 123 ALA 123 226 226 ALA ALA A . n A 1 124 ILE 124 227 227 ILE ILE A . n A 1 125 GLU 125 228 228 GLU GLU A . n A 1 126 ALA 126 229 229 ALA ALA A . n A 1 127 ILE 127 230 230 ILE ILE A . n A 1 128 ALA 128 231 231 ALA ALA A . n A 1 129 LYS 129 232 232 LYS LYS A . n A 1 130 ILE 130 233 233 ILE ILE A . n A 1 131 ARG 131 234 234 ARG ARG A . n A 1 132 SER 132 235 235 SER SER A . n A 1 133 HIS 133 236 236 HIS HIS A . n A 1 134 ILE 134 237 237 ILE ILE A . n A 1 135 SER 135 238 238 SER SER A . n A 1 136 ILE 136 239 239 ILE ILE A . n A 1 137 ARG 137 240 240 ARG ARG A . n A 1 138 PRO 138 241 241 PRO PRO A . n A 1 139 SER 139 242 242 SER SER A . n A 1 140 GLN 140 243 243 GLN GLN A . n A 1 141 LEU 141 244 244 LEU LEU A . n A 1 142 GLU 142 245 245 GLU GLU A . n A 1 143 VAL 143 246 246 VAL VAL A . n A 1 144 LEU 144 247 247 LEU LEU A . n A 1 145 LYS 145 248 248 LYS LYS A . n A 1 146 GLU 146 249 249 GLU GLU A . n A 1 147 PHE 147 250 250 PHE PHE A . n A 1 148 HIS 148 251 251 HIS HIS A . n A 1 149 LYS 149 252 252 LYS LYS A . n A 1 150 GLU 150 253 253 GLU GLU A . n A 1 151 ILE 151 254 254 ILE ILE A . n A 1 152 THR 152 255 255 THR THR A . n A 1 153 ALA 153 256 256 ALA ALA A . n A 1 154 ARG 154 257 257 ARG ARG A . n A 1 155 ALA 155 258 258 ALA ALA A . n A 1 156 ALA 156 259 259 ALA ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5P5 1 300 300 5P5 5P5 A . C 3 HOH 1 1 1 HOH HOH A . C 3 HOH 2 2 2 HOH HOH A . C 3 HOH 3 3 3 HOH HOH A . C 3 HOH 4 4 4 HOH HOH A . C 3 HOH 5 5 5 HOH HOH A . C 3 HOH 6 6 6 HOH HOH A . C 3 HOH 7 7 7 HOH HOH A . C 3 HOH 8 8 8 HOH HOH A . C 3 HOH 9 9 9 HOH HOH A . C 3 HOH 10 10 10 HOH HOH A . C 3 HOH 11 11 11 HOH HOH A . C 3 HOH 12 12 12 HOH HOH A . C 3 HOH 13 13 13 HOH HOH A . C 3 HOH 14 14 14 HOH HOH A . C 3 HOH 15 15 15 HOH HOH A . C 3 HOH 16 16 16 HOH HOH A . C 3 HOH 17 17 17 HOH HOH A . C 3 HOH 18 18 18 HOH HOH A . C 3 HOH 19 19 19 HOH HOH A . C 3 HOH 20 20 20 HOH HOH A . C 3 HOH 21 21 21 HOH HOH A . C 3 HOH 22 22 22 HOH HOH A . C 3 HOH 23 23 23 HOH HOH A . C 3 HOH 24 24 24 HOH HOH A . C 3 HOH 25 25 25 HOH HOH A . C 3 HOH 26 26 26 HOH HOH A . C 3 HOH 27 27 27 HOH HOH A . C 3 HOH 28 28 28 HOH HOH A . C 3 HOH 29 29 29 HOH HOH A . C 3 HOH 30 30 30 HOH HOH A . C 3 HOH 31 31 31 HOH HOH A . C 3 HOH 32 32 32 HOH HOH A . C 3 HOH 33 33 33 HOH HOH A . C 3 HOH 34 34 34 HOH HOH A . C 3 HOH 35 35 35 HOH HOH A . C 3 HOH 36 36 36 HOH HOH A . C 3 HOH 37 37 37 HOH HOH A . C 3 HOH 38 38 38 HOH HOH A . C 3 HOH 39 39 39 HOH HOH A . C 3 HOH 40 40 40 HOH HOH A . C 3 HOH 41 41 41 HOH HOH A . C 3 HOH 42 42 42 HOH HOH A . C 3 HOH 43 43 43 HOH HOH A . C 3 HOH 44 44 44 HOH HOH A . C 3 HOH 45 45 45 HOH HOH A . C 3 HOH 46 46 46 HOH HOH A . C 3 HOH 47 47 47 HOH HOH A . C 3 HOH 48 48 48 HOH HOH A . C 3 HOH 49 49 49 HOH HOH A . C 3 HOH 50 50 50 HOH HOH A . C 3 HOH 51 51 51 HOH HOH A . C 3 HOH 52 52 52 HOH HOH A . C 3 HOH 53 53 53 HOH HOH A . C 3 HOH 54 54 54 HOH HOH A . C 3 HOH 55 55 55 HOH HOH A . C 3 HOH 56 56 56 HOH HOH A . C 3 HOH 57 57 57 HOH HOH A . C 3 HOH 58 58 58 HOH HOH A . C 3 HOH 59 59 59 HOH HOH A . C 3 HOH 60 60 60 HOH HOH A . C 3 HOH 61 61 61 HOH HOH A . C 3 HOH 62 62 62 HOH HOH A . C 3 HOH 63 63 63 HOH HOH A . C 3 HOH 64 64 64 HOH HOH A . C 3 HOH 65 65 65 HOH HOH A . C 3 HOH 66 66 66 HOH HOH A . C 3 HOH 67 67 67 HOH HOH A . C 3 HOH 68 68 68 HOH HOH A . C 3 HOH 69 69 69 HOH HOH A . C 3 HOH 70 70 70 HOH HOH A . C 3 HOH 71 71 71 HOH HOH A . C 3 HOH 72 72 72 HOH HOH A . C 3 HOH 73 73 73 HOH HOH A . C 3 HOH 74 74 74 HOH HOH A . C 3 HOH 75 75 75 HOH HOH A . C 3 HOH 76 76 76 HOH HOH A . C 3 HOH 77 77 77 HOH HOH A . C 3 HOH 78 78 78 HOH HOH A . C 3 HOH 79 79 79 HOH HOH A . C 3 HOH 80 80 80 HOH HOH A . C 3 HOH 81 81 81 HOH HOH A . C 3 HOH 82 82 82 HOH HOH A . C 3 HOH 83 83 83 HOH HOH A . C 3 HOH 84 84 84 HOH HOH A . C 3 HOH 85 85 85 HOH HOH A . C 3 HOH 86 86 86 HOH HOH A . C 3 HOH 87 87 87 HOH HOH A . C 3 HOH 88 88 88 HOH HOH A . C 3 HOH 89 89 89 HOH HOH A . C 3 HOH 90 90 90 HOH HOH A . C 3 HOH 91 91 91 HOH HOH A . C 3 HOH 92 92 92 HOH HOH A . C 3 HOH 93 93 93 HOH HOH A . C 3 HOH 94 94 94 HOH HOH A . C 3 HOH 95 95 95 HOH HOH A . C 3 HOH 96 96 96 HOH HOH A . C 3 HOH 97 97 97 HOH HOH A . C 3 HOH 98 98 98 HOH HOH A . C 3 HOH 99 99 99 HOH HOH A . C 3 HOH 100 100 100 HOH HOH A . C 3 HOH 101 101 101 HOH HOH A . C 3 HOH 102 102 102 HOH HOH A . C 3 HOH 103 103 103 HOH HOH A . C 3 HOH 104 260 104 HOH HOH A . C 3 HOH 105 261 105 HOH HOH A . C 3 HOH 106 262 106 HOH HOH A . C 3 HOH 107 263 107 HOH HOH A . C 3 HOH 108 264 108 HOH HOH A . C 3 HOH 109 265 109 HOH HOH A . C 3 HOH 110 266 110 HOH HOH A . C 3 HOH 111 267 111 HOH HOH A . C 3 HOH 112 268 112 HOH HOH A . C 3 HOH 113 269 113 HOH HOH A . C 3 HOH 114 270 114 HOH HOH A . C 3 HOH 115 271 115 HOH HOH A . C 3 HOH 116 272 116 HOH HOH A . C 3 HOH 117 273 117 HOH HOH A . C 3 HOH 118 274 118 HOH HOH A . C 3 HOH 119 275 119 HOH HOH A . C 3 HOH 120 276 120 HOH HOH A . C 3 HOH 121 277 121 HOH HOH A . C 3 HOH 122 278 122 HOH HOH A . C 3 HOH 123 279 123 HOH HOH A . C 3 HOH 124 280 124 HOH HOH A . C 3 HOH 125 281 125 HOH HOH A . C 3 HOH 126 282 126 HOH HOH A . C 3 HOH 127 283 127 HOH HOH A . C 3 HOH 128 284 128 HOH HOH A . C 3 HOH 129 285 129 HOH HOH A . C 3 HOH 130 286 130 HOH HOH A . C 3 HOH 131 287 131 HOH HOH A . C 3 HOH 132 288 132 HOH HOH A . C 3 HOH 133 289 133 HOH HOH A . C 3 HOH 134 290 134 HOH HOH A . C 3 HOH 135 291 135 HOH HOH A . C 3 HOH 136 292 136 HOH HOH A . C 3 HOH 137 293 137 HOH HOH A . C 3 HOH 138 294 138 HOH HOH A . C 3 HOH 139 295 139 HOH HOH A . C 3 HOH 140 296 140 HOH HOH A . C 3 HOH 141 297 141 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A 5P5 300 ? C15 ? B 5P5 1 C15 2 1 N 1 A 5P5 300 ? C16 ? B 5P5 1 C16 3 1 N 1 A 5P5 300 ? C17 ? B 5P5 1 C17 4 1 N 1 A 5P5 300 ? O17 ? B 5P5 1 O17 # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHASER 2.1.4 'Wed Jun 24 14:00:05 2009' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 PHENIX 1.6.3_473 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 5 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 7 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? # _cell.length_a 90.019 _cell.length_b 67.914 _cell.length_c 32.088 _cell.angle_alpha 90.000 _cell.angle_beta 96.560 _cell.angle_gamma 90.000 _cell.entry_id 3RGQ _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.entry_id 3RGQ _symmetry.Int_Tables_number 5 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3RGQ _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.74 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 55.11 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 289 _exptl_crystal_grow.pdbx_details 'PEG 3350, MES, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 289K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2010-08-22 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.2.1' _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.2.1 # _reflns.entry_id 3RGQ _reflns.d_resolution_high 2.050 _reflns.d_resolution_low 50.000 _reflns.number_obs 11902 _reflns.pdbx_Rmerge_I_obs 0.062 _reflns.pdbx_netI_over_sigmaI 10.200 _reflns.pdbx_chi_squared 0.639 _reflns.pdbx_redundancy 3.700 _reflns.percent_possible_obs 97.800 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.050 2.090 ? ? ? 0.240 ? ? 0.588 3.400 ? 564 92.600 1 1 2.090 2.120 ? ? ? 0.220 ? ? 0.565 3.500 ? 557 92.700 2 1 2.120 2.160 ? ? ? 0.187 ? ? 0.574 3.500 ? 570 95.500 3 1 2.160 2.210 ? ? ? 0.175 ? ? 0.527 3.700 ? 576 97.000 4 1 2.210 2.260 ? ? ? 0.162 ? ? 0.568 3.700 ? 609 97.600 5 1 2.260 2.310 ? ? ? 0.150 ? ? 0.596 3.700 ? 587 97.500 6 1 2.310 2.370 ? ? ? 0.125 ? ? 0.578 3.800 ? 594 98.700 7 1 2.370 2.430 ? ? ? 0.125 ? ? 0.638 3.800 ? 601 98.400 8 1 2.430 2.500 ? ? ? 0.107 ? ? 0.533 3.800 ? 592 98.000 9 1 2.500 2.580 ? ? ? 0.096 ? ? 0.573 3.800 ? 592 98.700 10 1 2.580 2.680 ? ? ? 0.087 ? ? 0.593 3.700 ? 617 98.100 11 1 2.680 2.780 ? ? ? 0.082 ? ? 0.621 3.800 ? 573 99.300 12 1 2.780 2.910 ? ? ? 0.071 ? ? 0.645 3.800 ? 612 98.200 13 1 2.910 3.060 ? ? ? 0.068 ? ? 0.745 3.700 ? 583 99.300 14 1 3.060 3.250 ? ? ? 0.055 ? ? 0.753 3.700 ? 623 98.700 15 1 3.250 3.510 ? ? ? 0.050 ? ? 0.798 3.700 ? 596 99.200 16 1 3.510 3.860 ? ? ? 0.045 ? ? 0.823 3.600 ? 597 99.300 17 1 3.860 4.420 ? ? ? 0.039 ? ? 0.793 3.600 ? 614 99.400 18 1 4.420 5.560 ? ? ? 0.036 ? ? 0.657 3.700 ? 616 99.200 19 1 5.560 50.000 ? ? ? 0.031 ? ? 0.594 3.600 ? 629 99.500 20 1 # _refine.entry_id 3RGQ _refine.ls_d_res_high 2.05 _refine.ls_d_res_low 44.7150 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 97.4800 _refine.ls_number_reflns_obs 11896 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1748 _refine.ls_R_factor_R_work 0.1729 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2146 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.8100 _refine.ls_number_reflns_R_free 572 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 27.9437 _refine.solvent_model_param_bsol 58.1570 _refine.solvent_model_param_ksol 0.3870 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 11.9438 _refine.aniso_B[2][2] -5.9825 _refine.aniso_B[3][3] -5.9613 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -2.6031 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.2200 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9500 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8657 _refine.B_iso_max 97.190 _refine.B_iso_min 9.210 _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1248 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 31 _refine_hist.number_atoms_solvent 141 _refine_hist.number_atoms_total 1420 _refine_hist.d_res_high 2.05 _refine_hist.d_res_low 44.7150 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 1303 0.003 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 1765 0.772 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 204 0.059 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 216 0.003 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 523 21.115 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.05 2.2515 4 94.0000 2704 . 0.1819 0.2478 . 145 . 2849 . . 'X-RAY DIFFRACTION' 2.2515 2.5773 4 98.0000 2840 . 0.1752 0.2363 . 137 . 2977 . . 'X-RAY DIFFRACTION' 2.5773 3.2470 4 99.0000 2871 . 0.1751 0.2372 . 144 . 3015 . . 'X-RAY DIFFRACTION' 3.2470 44.7255 4 99.0000 2909 . 0.1684 0.1845 . 146 . 3055 . . 'X-RAY DIFFRACTION' # _struct.entry_id 3RGQ _struct.title 'Crystal Structure of PTPMT1 in complex with PI(5)P' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3RGQ _struct_keywords.text 'phosphatidylglycerol phosphate (PGP) phosphatase, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PTPM1_MOUSE _struct_ref.pdbx_db_accession Q66GT5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DWYHRIDHTVLLGALPLKNMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLRLSTVDMTGVPTLANLHKGV QFALKYQALGQCVYVHCKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPSQLEVLKEFHKEITARAA ; _struct_ref.pdbx_align_begin 36 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3RGQ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 156 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q66GT5 _struct_ref_seq.db_align_beg 36 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 191 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 104 _struct_ref_seq.pdbx_auth_seq_align_end 259 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3RGQ _struct_ref_seq_dif.mon_id SER _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 97 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q66GT5 _struct_ref_seq_dif.db_mon_id CYS _struct_ref_seq_dif.pdbx_seq_db_seq_num 132 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 200 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 17 ? ASN A 19 ? LEU A 120 ASN A 122 5 ? 3 HELX_P HELX_P2 2 MET A 20 ? ASP A 27 ? MET A 123 ASP A 130 1 ? 8 HELX_P HELX_P3 3 GLU A 38 ? ARG A 43 ? GLU A 141 ARG A 146 1 ? 6 HELX_P HELX_P4 4 THR A 48 ? ALA A 55 ? THR A 151 ALA A 158 1 ? 8 HELX_P HELX_P5 5 THR A 72 ? LEU A 89 ? THR A 175 LEU A 192 1 ? 18 HELX_P HELX_P6 6 SER A 102 ? ASN A 117 ? SER A 205 ASN A 220 1 ? 16 HELX_P HELX_P7 7 SER A 119 ? ARG A 131 ? SER A 222 ARG A 234 1 ? 13 HELX_P HELX_P8 8 ARG A 137 ? ALA A 156 ? ARG A 240 ALA A 259 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 3 ? ARG A 5 ? TYR A 106 ARG A 108 A 2 VAL A 10 ? GLY A 13 ? VAL A 113 GLY A 116 A 3 CYS A 92 ? HIS A 96 ? CYS A 195 HIS A 199 A 4 VAL A 30 ? THR A 35 ? VAL A 133 THR A 138 A 5 GLU A 58 ? ARG A 61 ? GLU A 161 ARG A 164 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N HIS A 4 ? N HIS A 107 O LEU A 12 ? O LEU A 115 A 2 3 N LEU A 11 ? N LEU A 114 O VAL A 95 ? O VAL A 198 A 3 4 O CYS A 92 ? O CYS A 195 N ARG A 31 ? N ARG A 134 A 4 5 N VAL A 33 ? N VAL A 136 O LEU A 60 ? O LEU A 163 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id 5P5 _struct_site.pdbx_auth_seq_id 300 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 13 _struct_site.details 'BINDING SITE FOR RESIDUE 5P5 A 300' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 13 HOH C . ? HOH A 21 . ? 1_555 ? 2 AC1 13 HOH C . ? HOH A 83 . ? 1_555 ? 3 AC1 13 TRP A 2 ? TRP A 105 . ? 1_555 ? 4 AC1 13 LEU A 15 ? LEU A 118 . ? 1_555 ? 5 AC1 13 MET A 67 ? MET A 170 . ? 1_555 ? 6 AC1 13 SER A 97 ? SER A 200 . ? 1_555 ? 7 AC1 13 LYS A 98 ? LYS A 201 . ? 1_555 ? 8 AC1 13 ALA A 99 ? ALA A 202 . ? 1_555 ? 9 AC1 13 GLY A 100 ? GLY A 203 . ? 1_555 ? 10 AC1 13 ARG A 101 ? ARG A 204 . ? 1_555 ? 11 AC1 13 SER A 102 ? SER A 205 . ? 1_555 ? 12 AC1 13 ARG A 103 ? ARG A 206 . ? 1_555 ? 13 AC1 13 ARG A 137 ? ARG A 240 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 270 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 271 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 147 ? ? 82.90 -45.21 2 1 SER A 200 ? ? -133.67 -151.54 3 1 SER A 205 ? ? -133.47 -72.29 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 273 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 28.2624 _pdbx_refine_tls.origin_y -7.0844 _pdbx_refine_tls.origin_z 7.1619 _pdbx_refine_tls.T[1][1] 0.1151 _pdbx_refine_tls.T[2][2] 0.0862 _pdbx_refine_tls.T[3][3] 0.0720 _pdbx_refine_tls.T[1][2] -0.0111 _pdbx_refine_tls.T[1][3] 0.0097 _pdbx_refine_tls.T[2][3] -0.0018 _pdbx_refine_tls.L[1][1] 1.3066 _pdbx_refine_tls.L[2][2] 1.3861 _pdbx_refine_tls.L[3][3] 1.7510 _pdbx_refine_tls.L[1][2] 0.6601 _pdbx_refine_tls.L[1][3] 0.9097 _pdbx_refine_tls.L[2][3] 0.6783 _pdbx_refine_tls.S[1][1] 0.1067 _pdbx_refine_tls.S[2][2] -0.1079 _pdbx_refine_tls.S[3][3] -0.0005 _pdbx_refine_tls.S[1][2] -0.1279 _pdbx_refine_tls.S[1][3] -0.0273 _pdbx_refine_tls.S[2][3] -0.0030 _pdbx_refine_tls.S[2][1] 0.2326 _pdbx_refine_tls.S[3][1] 0.2234 _pdbx_refine_tls.S[3][2] -0.0020 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 104 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 259 _pdbx_refine_tls_group.selection_details ALL _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? # _pdbx_phasing_MR.entry_id 3RGQ _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor 32.590 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.500 _pdbx_phasing_MR.d_res_low_rotation 44.720 _pdbx_phasing_MR.d_res_high_translation 2.500 _pdbx_phasing_MR.d_res_low_translation 44.720 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5P5 C1 C N R 1 5P5 O1 O N N 2 5P5 P1 P N N 3 5P5 C2 C N R 4 5P5 O2 O N N 5 5P5 C3 C N R 6 5P5 O3 O N N 7 5P5 C4 C N R 8 5P5 O4 O N N 9 5P5 C5 C N S 10 5P5 O5 O N N 11 5P5 P5 P N N 12 5P5 C6 C N R 13 5P5 O6 O N N 14 5P5 C7 C N N 15 5P5 C8 C N R 16 5P5 C9 C N N 17 5P5 C10 C N N 18 5P5 C11 C N N 19 5P5 O11 O N N 20 5P5 C12 C N N 21 5P5 O12 O N N 22 5P5 C13 C N N 23 5P5 O13 O N N 24 5P5 C14 C N N 25 5P5 O14 O N N 26 5P5 C15 C N N 27 5P5 O15 O N N 28 5P5 C16 C N N 29 5P5 O16 O N N 30 5P5 C17 C N N 31 5P5 O17 O N N 32 5P5 O51 O N N 33 5P5 O52 O N N 34 5P5 O53 O N N 35 5P5 H1 H N N 36 5P5 H2 H N N 37 5P5 HO2 H N N 38 5P5 H3 H N N 39 5P5 HO3 H N N 40 5P5 H4 H N N 41 5P5 HO4 H N N 42 5P5 H5 H N N 43 5P5 H6 H N N 44 5P5 HO6 H N N 45 5P5 H7 H N N 46 5P5 H7A H N N 47 5P5 H8 H N N 48 5P5 H9 H N N 49 5P5 H9A H N N 50 5P5 H11 H N N 51 5P5 H11A H N N 52 5P5 HO11 H N N 53 5P5 H12 H N N 54 5P5 H13 H N N 55 5P5 H13A H N N 56 5P5 H15 H N N 57 5P5 H15A H N N 58 5P5 H16 H N N 59 5P5 H17 H N N 60 5P5 H17A H N N 61 5P5 HO52 H N N 62 5P5 HO53 H N N 63 5P5 H12A H N N 64 5P5 H13B H N N 65 5P5 H16A H N N 66 5P5 H17B H N N 67 ALA N N N N 68 ALA CA C N S 69 ALA C C N N 70 ALA O O N N 71 ALA CB C N N 72 ALA OXT O N N 73 ALA H H N N 74 ALA H2 H N N 75 ALA HA H N N 76 ALA HB1 H N N 77 ALA HB2 H N N 78 ALA HB3 H N N 79 ALA HXT H N N 80 ARG N N N N 81 ARG CA C N S 82 ARG C C N N 83 ARG O O N N 84 ARG CB C N N 85 ARG CG C N N 86 ARG CD C N N 87 ARG NE N N N 88 ARG CZ C N N 89 ARG NH1 N N N 90 ARG NH2 N N N 91 ARG OXT O N N 92 ARG H H N N 93 ARG H2 H N N 94 ARG HA H N N 95 ARG HB2 H N N 96 ARG HB3 H N N 97 ARG HG2 H N N 98 ARG HG3 H N N 99 ARG HD2 H N N 100 ARG HD3 H N N 101 ARG HE H N N 102 ARG HH11 H N N 103 ARG HH12 H N N 104 ARG HH21 H N N 105 ARG HH22 H N N 106 ARG HXT H N N 107 ASN N N N N 108 ASN CA C N S 109 ASN C C N N 110 ASN O O N N 111 ASN CB C N N 112 ASN CG C N N 113 ASN OD1 O N N 114 ASN ND2 N N N 115 ASN OXT O N N 116 ASN H H N N 117 ASN H2 H N N 118 ASN HA H N N 119 ASN HB2 H N N 120 ASN HB3 H N N 121 ASN HD21 H N N 122 ASN HD22 H N N 123 ASN HXT H N N 124 ASP N N N N 125 ASP CA C N S 126 ASP C C N N 127 ASP O O N N 128 ASP CB C N N 129 ASP CG C N N 130 ASP OD1 O N N 131 ASP OD2 O N N 132 ASP OXT O N N 133 ASP H H N N 134 ASP H2 H N N 135 ASP HA H N N 136 ASP HB2 H N N 137 ASP HB3 H N N 138 ASP HD2 H N N 139 ASP HXT H N N 140 CYS N N N N 141 CYS CA C N R 142 CYS C C N N 143 CYS O O N N 144 CYS CB C N N 145 CYS SG S N N 146 CYS OXT O N N 147 CYS H H N N 148 CYS H2 H N N 149 CYS HA H N N 150 CYS HB2 H N N 151 CYS HB3 H N N 152 CYS HG H N N 153 CYS HXT H N N 154 GLN N N N N 155 GLN CA C N S 156 GLN C C N N 157 GLN O O N N 158 GLN CB C N N 159 GLN CG C N N 160 GLN CD C N N 161 GLN OE1 O N N 162 GLN NE2 N N N 163 GLN OXT O N N 164 GLN H H N N 165 GLN H2 H N N 166 GLN HA H N N 167 GLN HB2 H N N 168 GLN HB3 H N N 169 GLN HG2 H N N 170 GLN HG3 H N N 171 GLN HE21 H N N 172 GLN HE22 H N N 173 GLN HXT H N N 174 GLU N N N N 175 GLU CA C N S 176 GLU C C N N 177 GLU O O N N 178 GLU CB C N N 179 GLU CG C N N 180 GLU CD C N N 181 GLU OE1 O N N 182 GLU OE2 O N N 183 GLU OXT O N N 184 GLU H H N N 185 GLU H2 H N N 186 GLU HA H N N 187 GLU HB2 H N N 188 GLU HB3 H N N 189 GLU HG2 H N N 190 GLU HG3 H N N 191 GLU HE2 H N N 192 GLU HXT H N N 193 GLY N N N N 194 GLY CA C N N 195 GLY C C N N 196 GLY O O N N 197 GLY OXT O N N 198 GLY H H N N 199 GLY H2 H N N 200 GLY HA2 H N N 201 GLY HA3 H N N 202 GLY HXT H N N 203 HIS N N N N 204 HIS CA C N S 205 HIS C C N N 206 HIS O O N N 207 HIS CB C N N 208 HIS CG C Y N 209 HIS ND1 N Y N 210 HIS CD2 C Y N 211 HIS CE1 C Y N 212 HIS NE2 N Y N 213 HIS OXT O N N 214 HIS H H N N 215 HIS H2 H N N 216 HIS HA H N N 217 HIS HB2 H N N 218 HIS HB3 H N N 219 HIS HD1 H N N 220 HIS HD2 H N N 221 HIS HE1 H N N 222 HIS HE2 H N N 223 HIS HXT H N N 224 HOH O O N N 225 HOH H1 H N N 226 HOH H2 H N N 227 ILE N N N N 228 ILE CA C N S 229 ILE C C N N 230 ILE O O N N 231 ILE CB C N S 232 ILE CG1 C N N 233 ILE CG2 C N N 234 ILE CD1 C N N 235 ILE OXT O N N 236 ILE H H N N 237 ILE H2 H N N 238 ILE HA H N N 239 ILE HB H N N 240 ILE HG12 H N N 241 ILE HG13 H N N 242 ILE HG21 H N N 243 ILE HG22 H N N 244 ILE HG23 H N N 245 ILE HD11 H N N 246 ILE HD12 H N N 247 ILE HD13 H N N 248 ILE HXT H N N 249 LEU N N N N 250 LEU CA C N S 251 LEU C C N N 252 LEU O O N N 253 LEU CB C N N 254 LEU CG C N N 255 LEU CD1 C N N 256 LEU CD2 C N N 257 LEU OXT O N N 258 LEU H H N N 259 LEU H2 H N N 260 LEU HA H N N 261 LEU HB2 H N N 262 LEU HB3 H N N 263 LEU HG H N N 264 LEU HD11 H N N 265 LEU HD12 H N N 266 LEU HD13 H N N 267 LEU HD21 H N N 268 LEU HD22 H N N 269 LEU HD23 H N N 270 LEU HXT H N N 271 LYS N N N N 272 LYS CA C N S 273 LYS C C N N 274 LYS O O N N 275 LYS CB C N N 276 LYS CG C N N 277 LYS CD C N N 278 LYS CE C N N 279 LYS NZ N N N 280 LYS OXT O N N 281 LYS H H N N 282 LYS H2 H N N 283 LYS HA H N N 284 LYS HB2 H N N 285 LYS HB3 H N N 286 LYS HG2 H N N 287 LYS HG3 H N N 288 LYS HD2 H N N 289 LYS HD3 H N N 290 LYS HE2 H N N 291 LYS HE3 H N N 292 LYS HZ1 H N N 293 LYS HZ2 H N N 294 LYS HZ3 H N N 295 LYS HXT H N N 296 MET N N N N 297 MET CA C N S 298 MET C C N N 299 MET O O N N 300 MET CB C N N 301 MET CG C N N 302 MET SD S N N 303 MET CE C N N 304 MET OXT O N N 305 MET H H N N 306 MET H2 H N N 307 MET HA H N N 308 MET HB2 H N N 309 MET HB3 H N N 310 MET HG2 H N N 311 MET HG3 H N N 312 MET HE1 H N N 313 MET HE2 H N N 314 MET HE3 H N N 315 MET HXT H N N 316 PHE N N N N 317 PHE CA C N S 318 PHE C C N N 319 PHE O O N N 320 PHE CB C N N 321 PHE CG C Y N 322 PHE CD1 C Y N 323 PHE CD2 C Y N 324 PHE CE1 C Y N 325 PHE CE2 C Y N 326 PHE CZ C Y N 327 PHE OXT O N N 328 PHE H H N N 329 PHE H2 H N N 330 PHE HA H N N 331 PHE HB2 H N N 332 PHE HB3 H N N 333 PHE HD1 H N N 334 PHE HD2 H N N 335 PHE HE1 H N N 336 PHE HE2 H N N 337 PHE HZ H N N 338 PHE HXT H N N 339 PRO N N N N 340 PRO CA C N S 341 PRO C C N N 342 PRO O O N N 343 PRO CB C N N 344 PRO CG C N N 345 PRO CD C N N 346 PRO OXT O N N 347 PRO H H N N 348 PRO HA H N N 349 PRO HB2 H N N 350 PRO HB3 H N N 351 PRO HG2 H N N 352 PRO HG3 H N N 353 PRO HD2 H N N 354 PRO HD3 H N N 355 PRO HXT H N N 356 SER N N N N 357 SER CA C N S 358 SER C C N N 359 SER O O N N 360 SER CB C N N 361 SER OG O N N 362 SER OXT O N N 363 SER H H N N 364 SER H2 H N N 365 SER HA H N N 366 SER HB2 H N N 367 SER HB3 H N N 368 SER HG H N N 369 SER HXT H N N 370 THR N N N N 371 THR CA C N S 372 THR C C N N 373 THR O O N N 374 THR CB C N R 375 THR OG1 O N N 376 THR CG2 C N N 377 THR OXT O N N 378 THR H H N N 379 THR H2 H N N 380 THR HA H N N 381 THR HB H N N 382 THR HG1 H N N 383 THR HG21 H N N 384 THR HG22 H N N 385 THR HG23 H N N 386 THR HXT H N N 387 TRP N N N N 388 TRP CA C N S 389 TRP C C N N 390 TRP O O N N 391 TRP CB C N N 392 TRP CG C Y N 393 TRP CD1 C Y N 394 TRP CD2 C Y N 395 TRP NE1 N Y N 396 TRP CE2 C Y N 397 TRP CE3 C Y N 398 TRP CZ2 C Y N 399 TRP CZ3 C Y N 400 TRP CH2 C Y N 401 TRP OXT O N N 402 TRP H H N N 403 TRP H2 H N N 404 TRP HA H N N 405 TRP HB2 H N N 406 TRP HB3 H N N 407 TRP HD1 H N N 408 TRP HE1 H N N 409 TRP HE3 H N N 410 TRP HZ2 H N N 411 TRP HZ3 H N N 412 TRP HH2 H N N 413 TRP HXT H N N 414 TYR N N N N 415 TYR CA C N S 416 TYR C C N N 417 TYR O O N N 418 TYR CB C N N 419 TYR CG C Y N 420 TYR CD1 C Y N 421 TYR CD2 C Y N 422 TYR CE1 C Y N 423 TYR CE2 C Y N 424 TYR CZ C Y N 425 TYR OH O N N 426 TYR OXT O N N 427 TYR H H N N 428 TYR H2 H N N 429 TYR HA H N N 430 TYR HB2 H N N 431 TYR HB3 H N N 432 TYR HD1 H N N 433 TYR HD2 H N N 434 TYR HE1 H N N 435 TYR HE2 H N N 436 TYR HH H N N 437 TYR HXT H N N 438 VAL N N N N 439 VAL CA C N S 440 VAL C C N N 441 VAL O O N N 442 VAL CB C N N 443 VAL CG1 C N N 444 VAL CG2 C N N 445 VAL OXT O N N 446 VAL H H N N 447 VAL H2 H N N 448 VAL HA H N N 449 VAL HB H N N 450 VAL HG11 H N N 451 VAL HG12 H N N 452 VAL HG13 H N N 453 VAL HG21 H N N 454 VAL HG22 H N N 455 VAL HG23 H N N 456 VAL HXT H N N 457 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5P5 C6 C1 sing N N 1 5P5 C1 O1 sing N N 2 5P5 C1 C2 sing N N 3 5P5 C1 H1 sing N N 4 5P5 O1 P1 sing N N 5 5P5 O13 P1 sing N N 6 5P5 P1 O12 doub N N 7 5P5 P1 O11 sing N N 8 5P5 C3 C2 sing N N 9 5P5 O2 C2 sing N N 10 5P5 C2 H2 sing N N 11 5P5 O2 HO2 sing N N 12 5P5 C4 C3 sing N N 13 5P5 C3 O3 sing N N 14 5P5 C3 H3 sing N N 15 5P5 O3 HO3 sing N N 16 5P5 C5 C4 sing N N 17 5P5 O4 C4 sing N N 18 5P5 C4 H4 sing N N 19 5P5 O4 HO4 sing N N 20 5P5 O5 C5 sing N N 21 5P5 C5 C6 sing N N 22 5P5 C5 H5 sing N N 23 5P5 P5 O5 sing N N 24 5P5 O51 P5 doub N N 25 5P5 P5 O53 sing N N 26 5P5 P5 O52 sing N N 27 5P5 O6 C6 sing N N 28 5P5 C6 H6 sing N N 29 5P5 O6 HO6 sing N N 30 5P5 C8 C7 sing N N 31 5P5 C7 O13 sing N N 32 5P5 C7 H7 sing N N 33 5P5 C7 H7A sing N N 34 5P5 C9 C8 sing N N 35 5P5 C8 O14 sing N N 36 5P5 C8 H8 sing N N 37 5P5 O15 C9 sing N N 38 5P5 C9 H9 sing N N 39 5P5 C9 H9A sing N N 40 5P5 O16 C10 doub N N 41 5P5 C10 C11 sing N N 42 5P5 C10 O15 sing N N 43 5P5 C12 C11 sing N N 44 5P5 C11 H11 sing N N 45 5P5 C11 H11A sing N N 46 5P5 O11 HO11 sing N N 47 5P5 C12 C13 sing N N 48 5P5 C12 H12 sing N N 49 5P5 C13 H13 sing N N 50 5P5 C13 H13A sing N N 51 5P5 O17 C14 doub N N 52 5P5 O14 C14 sing N N 53 5P5 C14 C15 sing N N 54 5P5 C15 C16 sing N N 55 5P5 C15 H15 sing N N 56 5P5 C15 H15A sing N N 57 5P5 C17 C16 sing N N 58 5P5 C16 H16 sing N N 59 5P5 C17 H17 sing N N 60 5P5 C17 H17A sing N N 61 5P5 O52 HO52 sing N N 62 5P5 O53 HO53 sing N N 63 5P5 C12 H12A sing N N 64 5P5 C13 H13B sing N N 65 5P5 C16 H16A sing N N 66 5P5 C17 H17B sing N N 67 ALA N CA sing N N 68 ALA N H sing N N 69 ALA N H2 sing N N 70 ALA CA C sing N N 71 ALA CA CB sing N N 72 ALA CA HA sing N N 73 ALA C O doub N N 74 ALA C OXT sing N N 75 ALA CB HB1 sing N N 76 ALA CB HB2 sing N N 77 ALA CB HB3 sing N N 78 ALA OXT HXT sing N N 79 ARG N CA sing N N 80 ARG N H sing N N 81 ARG N H2 sing N N 82 ARG CA C sing N N 83 ARG CA CB sing N N 84 ARG CA HA sing N N 85 ARG C O doub N N 86 ARG C OXT sing N N 87 ARG CB CG sing N N 88 ARG CB HB2 sing N N 89 ARG CB HB3 sing N N 90 ARG CG CD sing N N 91 ARG CG HG2 sing N N 92 ARG CG HG3 sing N N 93 ARG CD NE sing N N 94 ARG CD HD2 sing N N 95 ARG CD HD3 sing N N 96 ARG NE CZ sing N N 97 ARG NE HE sing N N 98 ARG CZ NH1 sing N N 99 ARG CZ NH2 doub N N 100 ARG NH1 HH11 sing N N 101 ARG NH1 HH12 sing N N 102 ARG NH2 HH21 sing N N 103 ARG NH2 HH22 sing N N 104 ARG OXT HXT sing N N 105 ASN N CA sing N N 106 ASN N H sing N N 107 ASN N H2 sing N N 108 ASN CA C sing N N 109 ASN CA CB sing N N 110 ASN CA HA sing N N 111 ASN C O doub N N 112 ASN C OXT sing N N 113 ASN CB CG sing N N 114 ASN CB HB2 sing N N 115 ASN CB HB3 sing N N 116 ASN CG OD1 doub N N 117 ASN CG ND2 sing N N 118 ASN ND2 HD21 sing N N 119 ASN ND2 HD22 sing N N 120 ASN OXT HXT sing N N 121 ASP N CA sing N N 122 ASP N H sing N N 123 ASP N H2 sing N N 124 ASP CA C sing N N 125 ASP CA CB sing N N 126 ASP CA HA sing N N 127 ASP C O doub N N 128 ASP C OXT sing N N 129 ASP CB CG sing N N 130 ASP CB HB2 sing N N 131 ASP CB HB3 sing N N 132 ASP CG OD1 doub N N 133 ASP CG OD2 sing N N 134 ASP OD2 HD2 sing N N 135 ASP OXT HXT sing N N 136 CYS N CA sing N N 137 CYS N H sing N N 138 CYS N H2 sing N N 139 CYS CA C sing N N 140 CYS CA CB sing N N 141 CYS CA HA sing N N 142 CYS C O doub N N 143 CYS C OXT sing N N 144 CYS CB SG sing N N 145 CYS CB HB2 sing N N 146 CYS CB HB3 sing N N 147 CYS SG HG sing N N 148 CYS OXT HXT sing N N 149 GLN N CA sing N N 150 GLN N H sing N N 151 GLN N H2 sing N N 152 GLN CA C sing N N 153 GLN CA CB sing N N 154 GLN CA HA sing N N 155 GLN C O doub N N 156 GLN C OXT sing N N 157 GLN CB CG sing N N 158 GLN CB HB2 sing N N 159 GLN CB HB3 sing N N 160 GLN CG CD sing N N 161 GLN CG HG2 sing N N 162 GLN CG HG3 sing N N 163 GLN CD OE1 doub N N 164 GLN CD NE2 sing N N 165 GLN NE2 HE21 sing N N 166 GLN NE2 HE22 sing N N 167 GLN OXT HXT sing N N 168 GLU N CA sing N N 169 GLU N H sing N N 170 GLU N H2 sing N N 171 GLU CA C sing N N 172 GLU CA CB sing N N 173 GLU CA HA sing N N 174 GLU C O doub N N 175 GLU C OXT sing N N 176 GLU CB CG sing N N 177 GLU CB HB2 sing N N 178 GLU CB HB3 sing N N 179 GLU CG CD sing N N 180 GLU CG HG2 sing N N 181 GLU CG HG3 sing N N 182 GLU CD OE1 doub N N 183 GLU CD OE2 sing N N 184 GLU OE2 HE2 sing N N 185 GLU OXT HXT sing N N 186 GLY N CA sing N N 187 GLY N H sing N N 188 GLY N H2 sing N N 189 GLY CA C sing N N 190 GLY CA HA2 sing N N 191 GLY CA HA3 sing N N 192 GLY C O doub N N 193 GLY C OXT sing N N 194 GLY OXT HXT sing N N 195 HIS N CA sing N N 196 HIS N H sing N N 197 HIS N H2 sing N N 198 HIS CA C sing N N 199 HIS CA CB sing N N 200 HIS CA HA sing N N 201 HIS C O doub N N 202 HIS C OXT sing N N 203 HIS CB CG sing N N 204 HIS CB HB2 sing N N 205 HIS CB HB3 sing N N 206 HIS CG ND1 sing Y N 207 HIS CG CD2 doub Y N 208 HIS ND1 CE1 doub Y N 209 HIS ND1 HD1 sing N N 210 HIS CD2 NE2 sing Y N 211 HIS CD2 HD2 sing N N 212 HIS CE1 NE2 sing Y N 213 HIS CE1 HE1 sing N N 214 HIS NE2 HE2 sing N N 215 HIS OXT HXT sing N N 216 HOH O H1 sing N N 217 HOH O H2 sing N N 218 ILE N CA sing N N 219 ILE N H sing N N 220 ILE N H2 sing N N 221 ILE CA C sing N N 222 ILE CA CB sing N N 223 ILE CA HA sing N N 224 ILE C O doub N N 225 ILE C OXT sing N N 226 ILE CB CG1 sing N N 227 ILE CB CG2 sing N N 228 ILE CB HB sing N N 229 ILE CG1 CD1 sing N N 230 ILE CG1 HG12 sing N N 231 ILE CG1 HG13 sing N N 232 ILE CG2 HG21 sing N N 233 ILE CG2 HG22 sing N N 234 ILE CG2 HG23 sing N N 235 ILE CD1 HD11 sing N N 236 ILE CD1 HD12 sing N N 237 ILE CD1 HD13 sing N N 238 ILE OXT HXT sing N N 239 LEU N CA sing N N 240 LEU N H sing N N 241 LEU N H2 sing N N 242 LEU CA C sing N N 243 LEU CA CB sing N N 244 LEU CA HA sing N N 245 LEU C O doub N N 246 LEU C OXT sing N N 247 LEU CB CG sing N N 248 LEU CB HB2 sing N N 249 LEU CB HB3 sing N N 250 LEU CG CD1 sing N N 251 LEU CG CD2 sing N N 252 LEU CG HG sing N N 253 LEU CD1 HD11 sing N N 254 LEU CD1 HD12 sing N N 255 LEU CD1 HD13 sing N N 256 LEU CD2 HD21 sing N N 257 LEU CD2 HD22 sing N N 258 LEU CD2 HD23 sing N N 259 LEU OXT HXT sing N N 260 LYS N CA sing N N 261 LYS N H sing N N 262 LYS N H2 sing N N 263 LYS CA C sing N N 264 LYS CA CB sing N N 265 LYS CA HA sing N N 266 LYS C O doub N N 267 LYS C OXT sing N N 268 LYS CB CG sing N N 269 LYS CB HB2 sing N N 270 LYS CB HB3 sing N N 271 LYS CG CD sing N N 272 LYS CG HG2 sing N N 273 LYS CG HG3 sing N N 274 LYS CD CE sing N N 275 LYS CD HD2 sing N N 276 LYS CD HD3 sing N N 277 LYS CE NZ sing N N 278 LYS CE HE2 sing N N 279 LYS CE HE3 sing N N 280 LYS NZ HZ1 sing N N 281 LYS NZ HZ2 sing N N 282 LYS NZ HZ3 sing N N 283 LYS OXT HXT sing N N 284 MET N CA sing N N 285 MET N H sing N N 286 MET N H2 sing N N 287 MET CA C sing N N 288 MET CA CB sing N N 289 MET CA HA sing N N 290 MET C O doub N N 291 MET C OXT sing N N 292 MET CB CG sing N N 293 MET CB HB2 sing N N 294 MET CB HB3 sing N N 295 MET CG SD sing N N 296 MET CG HG2 sing N N 297 MET CG HG3 sing N N 298 MET SD CE sing N N 299 MET CE HE1 sing N N 300 MET CE HE2 sing N N 301 MET CE HE3 sing N N 302 MET OXT HXT sing N N 303 PHE N CA sing N N 304 PHE N H sing N N 305 PHE N H2 sing N N 306 PHE CA C sing N N 307 PHE CA CB sing N N 308 PHE CA HA sing N N 309 PHE C O doub N N 310 PHE C OXT sing N N 311 PHE CB CG sing N N 312 PHE CB HB2 sing N N 313 PHE CB HB3 sing N N 314 PHE CG CD1 doub Y N 315 PHE CG CD2 sing Y N 316 PHE CD1 CE1 sing Y N 317 PHE CD1 HD1 sing N N 318 PHE CD2 CE2 doub Y N 319 PHE CD2 HD2 sing N N 320 PHE CE1 CZ doub Y N 321 PHE CE1 HE1 sing N N 322 PHE CE2 CZ sing Y N 323 PHE CE2 HE2 sing N N 324 PHE CZ HZ sing N N 325 PHE OXT HXT sing N N 326 PRO N CA sing N N 327 PRO N CD sing N N 328 PRO N H sing N N 329 PRO CA C sing N N 330 PRO CA CB sing N N 331 PRO CA HA sing N N 332 PRO C O doub N N 333 PRO C OXT sing N N 334 PRO CB CG sing N N 335 PRO CB HB2 sing N N 336 PRO CB HB3 sing N N 337 PRO CG CD sing N N 338 PRO CG HG2 sing N N 339 PRO CG HG3 sing N N 340 PRO CD HD2 sing N N 341 PRO CD HD3 sing N N 342 PRO OXT HXT sing N N 343 SER N CA sing N N 344 SER N H sing N N 345 SER N H2 sing N N 346 SER CA C sing N N 347 SER CA CB sing N N 348 SER CA HA sing N N 349 SER C O doub N N 350 SER C OXT sing N N 351 SER CB OG sing N N 352 SER CB HB2 sing N N 353 SER CB HB3 sing N N 354 SER OG HG sing N N 355 SER OXT HXT sing N N 356 THR N CA sing N N 357 THR N H sing N N 358 THR N H2 sing N N 359 THR CA C sing N N 360 THR CA CB sing N N 361 THR CA HA sing N N 362 THR C O doub N N 363 THR C OXT sing N N 364 THR CB OG1 sing N N 365 THR CB CG2 sing N N 366 THR CB HB sing N N 367 THR OG1 HG1 sing N N 368 THR CG2 HG21 sing N N 369 THR CG2 HG22 sing N N 370 THR CG2 HG23 sing N N 371 THR OXT HXT sing N N 372 TRP N CA sing N N 373 TRP N H sing N N 374 TRP N H2 sing N N 375 TRP CA C sing N N 376 TRP CA CB sing N N 377 TRP CA HA sing N N 378 TRP C O doub N N 379 TRP C OXT sing N N 380 TRP CB CG sing N N 381 TRP CB HB2 sing N N 382 TRP CB HB3 sing N N 383 TRP CG CD1 doub Y N 384 TRP CG CD2 sing Y N 385 TRP CD1 NE1 sing Y N 386 TRP CD1 HD1 sing N N 387 TRP CD2 CE2 doub Y N 388 TRP CD2 CE3 sing Y N 389 TRP NE1 CE2 sing Y N 390 TRP NE1 HE1 sing N N 391 TRP CE2 CZ2 sing Y N 392 TRP CE3 CZ3 doub Y N 393 TRP CE3 HE3 sing N N 394 TRP CZ2 CH2 doub Y N 395 TRP CZ2 HZ2 sing N N 396 TRP CZ3 CH2 sing Y N 397 TRP CZ3 HZ3 sing N N 398 TRP CH2 HH2 sing N N 399 TRP OXT HXT sing N N 400 TYR N CA sing N N 401 TYR N H sing N N 402 TYR N H2 sing N N 403 TYR CA C sing N N 404 TYR CA CB sing N N 405 TYR CA HA sing N N 406 TYR C O doub N N 407 TYR C OXT sing N N 408 TYR CB CG sing N N 409 TYR CB HB2 sing N N 410 TYR CB HB3 sing N N 411 TYR CG CD1 doub Y N 412 TYR CG CD2 sing Y N 413 TYR CD1 CE1 sing Y N 414 TYR CD1 HD1 sing N N 415 TYR CD2 CE2 doub Y N 416 TYR CD2 HD2 sing N N 417 TYR CE1 CZ doub Y N 418 TYR CE1 HE1 sing N N 419 TYR CE2 CZ sing Y N 420 TYR CE2 HE2 sing N N 421 TYR CZ OH sing N N 422 TYR OH HH sing N N 423 TYR OXT HXT sing N N 424 VAL N CA sing N N 425 VAL N H sing N N 426 VAL N H2 sing N N 427 VAL CA C sing N N 428 VAL CA CB sing N N 429 VAL CA HA sing N N 430 VAL C O doub N N 431 VAL C OXT sing N N 432 VAL CB CG1 sing N N 433 VAL CB CG2 sing N N 434 VAL CB HB sing N N 435 VAL CG1 HG11 sing N N 436 VAL CG1 HG12 sing N N 437 VAL CG1 HG13 sing N N 438 VAL CG2 HG21 sing N N 439 VAL CG2 HG22 sing N N 440 VAL CG2 HG23 sing N N 441 VAL OXT HXT sing N N 442 # _atom_sites.entry_id 3RGQ _atom_sites.fract_transf_matrix[1][1] 0.011109 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001277 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014725 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.031370 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_