data_3RHE # _entry.id 3RHE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3RHE RCSB RCSB064934 WWPDB D_1000064934 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id NYSGRC-000544 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3RHE _pdbx_database_status.recvd_initial_deposition_date 2011-04-11 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhang, Z.' 1 'Almo, S.C.' 2 'Swaminathan, S.' 3 'New York Structural Genomics Research Consortium (NYSGRC)' 4 # _citation.id primary _citation.title 'The crystal structure of NAD-dependent benzaldehyde dehydrogenase from Legionella pneumophila' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Zhang, Z.' 1 primary 'Almo, S.C.' 2 primary 'Swaminathan, S.' 3 # _cell.entry_id 3RHE _cell.length_a 43.536 _cell.length_b 77.707 _cell.length_c 83.024 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3RHE _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'NAD-dependent benzaldehyde dehydrogenase' 17723.941 1 ? ? ? ? 2 water nat water 18.015 40 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)V(MSE)LSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSPTFA(MSE)FV(MSE)KTGLRLGLWAQEEIEPKAHQ TGGG(MSE)ELSFQVNSNE(MSE)VDEIHRQWSDKEISIIQPPTQ(MSE)DFGYTFVGVDPDEHRLRIFCLKRTAENLYF QSHHHHHHWSHPQFEK ; _entity_poly.pdbx_seq_one_letter_code_can ;MVMLSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSPTFAMFVMKTGLRLGLWAQEEIEPKAHQTGGGMELSFQVNSNEM VDEIHRQWSDKEISIIQPPTQMDFGYTFVGVDPDEHRLRIFCLKRTAENLYFQSHHHHHHWSHPQFEK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier NYSGRC-000544 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 VAL n 1 3 MSE n 1 4 LEU n 1 5 SER n 1 6 ASP n 1 7 PRO n 1 8 ASN n 1 9 LEU n 1 10 VAL n 1 11 LEU n 1 12 PHE n 1 13 TYR n 1 14 VAL n 1 15 LYS n 1 16 ASN n 1 17 PRO n 1 18 ALA n 1 19 LYS n 1 20 SER n 1 21 GLU n 1 22 GLU n 1 23 PHE n 1 24 TYR n 1 25 LYS n 1 26 ASN n 1 27 LEU n 1 28 LEU n 1 29 ASP n 1 30 THR n 1 31 GLN n 1 32 PRO n 1 33 ILE n 1 34 GLU n 1 35 SER n 1 36 SER n 1 37 PRO n 1 38 THR n 1 39 PHE n 1 40 ALA n 1 41 MSE n 1 42 PHE n 1 43 VAL n 1 44 MSE n 1 45 LYS n 1 46 THR n 1 47 GLY n 1 48 LEU n 1 49 ARG n 1 50 LEU n 1 51 GLY n 1 52 LEU n 1 53 TRP n 1 54 ALA n 1 55 GLN n 1 56 GLU n 1 57 GLU n 1 58 ILE n 1 59 GLU n 1 60 PRO n 1 61 LYS n 1 62 ALA n 1 63 HIS n 1 64 GLN n 1 65 THR n 1 66 GLY n 1 67 GLY n 1 68 GLY n 1 69 MSE n 1 70 GLU n 1 71 LEU n 1 72 SER n 1 73 PHE n 1 74 GLN n 1 75 VAL n 1 76 ASN n 1 77 SER n 1 78 ASN n 1 79 GLU n 1 80 MSE n 1 81 VAL n 1 82 ASP n 1 83 GLU n 1 84 ILE n 1 85 HIS n 1 86 ARG n 1 87 GLN n 1 88 TRP n 1 89 SER n 1 90 ASP n 1 91 LYS n 1 92 GLU n 1 93 ILE n 1 94 SER n 1 95 ILE n 1 96 ILE n 1 97 GLN n 1 98 PRO n 1 99 PRO n 1 100 THR n 1 101 GLN n 1 102 MSE n 1 103 ASP n 1 104 PHE n 1 105 GLY n 1 106 TYR n 1 107 THR n 1 108 PHE n 1 109 VAL n 1 110 GLY n 1 111 VAL n 1 112 ASP n 1 113 PRO n 1 114 ASP n 1 115 GLU n 1 116 HIS n 1 117 ARG n 1 118 LEU n 1 119 ARG n 1 120 ILE n 1 121 PHE n 1 122 CYS n 1 123 LEU n 1 124 LYS n 1 125 ARG n 1 126 THR n 1 127 ALA n 1 128 GLU n 1 129 ASN n 1 130 LEU n 1 131 TYR n 1 132 PHE n 1 133 GLN n 1 134 SER n 1 135 HIS n 1 136 HIS n 1 137 HIS n 1 138 HIS n 1 139 HIS n 1 140 HIS n 1 141 TRP n 1 142 SER n 1 143 HIS n 1 144 PRO n 1 145 GLN n 1 146 PHE n 1 147 GLU n 1 148 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene lpg2169 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'pneumophila str. Philadelphia 1' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Legionella pneumophila' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 272624 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Bl21(DE3) RIP' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5ZTJ2_LEGPH _struct_ref.pdbx_db_accession Q5ZTJ2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MLSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSPTFAMFVMKTGLRLGLWAQEEIEPKAHQTGGGMELSFQVNSNEMVD EIHRQWSDKEISIIQPPTQMDFGYTFVGVDPDEHRLRIFCLKRT ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3RHE _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 126 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q5ZTJ2 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 124 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 124 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3RHE MSE A 1 ? UNP Q5ZTJ2 ? ? 'EXPRESSION TAG' -1 1 1 3RHE VAL A 2 ? UNP Q5ZTJ2 ? ? 'EXPRESSION TAG' 0 2 1 3RHE ALA A 127 ? UNP Q5ZTJ2 ? ? 'EXPRESSION TAG' 125 3 1 3RHE GLU A 128 ? UNP Q5ZTJ2 ? ? 'EXPRESSION TAG' 126 4 1 3RHE ASN A 129 ? UNP Q5ZTJ2 ? ? 'EXPRESSION TAG' 127 5 1 3RHE LEU A 130 ? UNP Q5ZTJ2 ? ? 'EXPRESSION TAG' 128 6 1 3RHE TYR A 131 ? UNP Q5ZTJ2 ? ? 'EXPRESSION TAG' 129 7 1 3RHE PHE A 132 ? UNP Q5ZTJ2 ? ? 'EXPRESSION TAG' 130 8 1 3RHE GLN A 133 ? UNP Q5ZTJ2 ? ? 'EXPRESSION TAG' 131 9 1 3RHE SER A 134 ? UNP Q5ZTJ2 ? ? 'EXPRESSION TAG' 132 10 1 3RHE HIS A 135 ? UNP Q5ZTJ2 ? ? 'EXPRESSION TAG' 133 11 1 3RHE HIS A 136 ? UNP Q5ZTJ2 ? ? 'EXPRESSION TAG' 134 12 1 3RHE HIS A 137 ? UNP Q5ZTJ2 ? ? 'EXPRESSION TAG' 135 13 1 3RHE HIS A 138 ? UNP Q5ZTJ2 ? ? 'EXPRESSION TAG' 136 14 1 3RHE HIS A 139 ? UNP Q5ZTJ2 ? ? 'EXPRESSION TAG' 137 15 1 3RHE HIS A 140 ? UNP Q5ZTJ2 ? ? 'EXPRESSION TAG' 138 16 1 3RHE TRP A 141 ? UNP Q5ZTJ2 ? ? 'EXPRESSION TAG' 139 17 1 3RHE SER A 142 ? UNP Q5ZTJ2 ? ? 'EXPRESSION TAG' 140 18 1 3RHE HIS A 143 ? UNP Q5ZTJ2 ? ? 'EXPRESSION TAG' 141 19 1 3RHE PRO A 144 ? UNP Q5ZTJ2 ? ? 'EXPRESSION TAG' 142 20 1 3RHE GLN A 145 ? UNP Q5ZTJ2 ? ? 'EXPRESSION TAG' 143 21 1 3RHE PHE A 146 ? UNP Q5ZTJ2 ? ? 'EXPRESSION TAG' 144 22 1 3RHE GLU A 147 ? UNP Q5ZTJ2 ? ? 'EXPRESSION TAG' 145 23 1 3RHE LYS A 148 ? UNP Q5ZTJ2 ? ? 'EXPRESSION TAG' 146 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3RHE _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.98 _exptl_crystal.density_percent_sol 37.91 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 3.5 _exptl_crystal_grow.pdbx_details '0.1 Citric acid pH 3.5, 25% PEG 3350, VAPOR DIFFUSION, SITTING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2011-03-04 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9791 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X25' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X25 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9791 # _reflns.entry_id 3RHE _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.05 _reflns.number_obs 9137 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.09 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.3 _reflns.B_iso_Wilson_estimate 23.73 _reflns.pdbx_redundancy 13.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.05 _reflns_shell.d_res_low 2.12 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.09 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 9.1 _reflns_shell.pdbx_redundancy 11.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 891 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3RHE _refine.ls_number_reflns_obs 8968 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.05 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 41.512 _refine.ls_d_res_high 2.053 _refine.ls_percent_reflns_obs 98.25 _refine.ls_R_factor_obs 0.2191 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2179 _refine.ls_R_factor_R_free 0.2412 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.75 _refine.ls_number_reflns_R_free 426 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 3.6984 _refine.aniso_B[2][2] -4.3699 _refine.aniso_B[3][3] 0.6715 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.386 _refine.solvent_model_param_bsol 57.731 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model Isotropic _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.32 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error 21.61 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 934 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 40 _refine_hist.number_atoms_total 974 _refine_hist.d_res_high 2.053 _refine_hist.d_res_low 41.512 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.007 ? ? 967 ? 'X-RAY DIFFRACTION' f_angle_d 1.132 ? ? 1309 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 19.290 ? ? 362 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.082 ? ? 140 ? 'X-RAY DIFFRACTION' f_plane_restr 0.005 ? ? 170 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.0530 2.3501 2738 0.1925 96.00 0.2259 . . 143 . . . . 'X-RAY DIFFRACTION' . 2.3501 2.9607 2837 0.2075 99.00 0.2634 . . 136 . . . . 'X-RAY DIFFRACTION' . 2.9607 41.5205 2967 0.2298 100.00 0.2356 . . 147 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 3RHE _struct.title 'The crystal structure of NAD-dependent benzaldehyde dehydrogenase from Legionella pneumophila' _struct.pdbx_descriptor 'NAD-dependent benzaldehyde dehydrogenase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3RHE _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text 'Structural Genomics, PSI-Biology, New York Structural Genomics Research Consortium, NYSGRC, SGX, PSI biology, OXIDOREDUCTASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 16 ? ASP A 29 ? ASN A 14 ASP A 27 1 ? 14 HELX_P HELX_P2 2 GLU A 56 ? ILE A 58 ? GLU A 54 ILE A 56 5 ? 3 HELX_P HELX_P3 3 SER A 77 ? LYS A 91 ? SER A 75 LYS A 89 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ALA 40 C ? ? ? 1_555 A MSE 41 N ? ? A ALA 38 A MSE 39 1_555 ? ? ? ? ? ? ? 1.324 ? covale2 covale ? ? A MSE 41 C ? ? ? 1_555 A PHE 42 N ? ? A MSE 39 A PHE 40 1_555 ? ? ? ? ? ? ? 1.330 ? covale3 covale ? ? A VAL 43 C ? ? ? 1_555 A MSE 44 N ? ? A VAL 41 A MSE 42 1_555 ? ? ? ? ? ? ? 1.332 ? covale4 covale ? ? A MSE 44 C ? ? ? 1_555 A LYS 45 N ? ? A MSE 42 A LYS 43 1_555 ? ? ? ? ? ? ? 1.324 ? covale5 covale ? ? A GLY 68 C ? ? ? 1_555 A MSE 69 N ? ? A GLY 66 A MSE 67 1_555 ? ? ? ? ? ? ? 1.326 ? covale6 covale ? ? A MSE 69 C ? ? ? 1_555 A GLU 70 N ? ? A MSE 67 A GLU 68 1_555 ? ? ? ? ? ? ? 1.327 ? covale7 covale ? ? A GLU 79 C ? ? ? 1_555 A MSE 80 N ? ? A GLU 77 A MSE 78 1_555 ? ? ? ? ? ? ? 1.329 ? covale8 covale ? ? A MSE 80 C ? ? ? 1_555 A VAL 81 N ? ? A MSE 78 A VAL 79 1_555 ? ? ? ? ? ? ? 1.332 ? covale9 covale ? ? A GLN 101 C ? ? ? 1_555 A MSE 102 N ? ? A GLN 99 A MSE 100 1_555 ? ? ? ? ? ? ? 1.326 ? covale10 covale ? ? A MSE 102 C ? ? ? 1_555 A ASP 103 N ? ? A MSE 100 A ASP 101 1_555 ? ? ? ? ? ? ? 1.327 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLU _struct_mon_prot_cis.label_seq_id 59 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLU _struct_mon_prot_cis.auth_seq_id 57 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 60 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 58 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.62 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 34 ? SER A 35 ? GLU A 32 SER A 33 A 2 PHE A 39 ? VAL A 43 ? PHE A 37 VAL A 41 A 3 ARG A 49 ? ALA A 54 ? ARG A 47 ALA A 52 A 4 ASN A 8 ? VAL A 14 ? ASN A 6 VAL A 12 A 5 MSE A 69 ? GLN A 74 ? MSE A 67 GLN A 72 A 6 ARG A 117 ? LEU A 123 ? ARG A 115 LEU A 121 A 7 GLY A 105 ? VAL A 111 ? GLY A 103 VAL A 109 A 8 ILE A 95 ? MSE A 102 ? ILE A 93 MSE A 100 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 34 ? N GLU A 32 O MSE A 41 ? O MSE A 39 A 2 3 N PHE A 42 ? N PHE A 40 O LEU A 50 ? O LEU A 48 A 3 4 O GLY A 51 ? O GLY A 49 N VAL A 10 ? N VAL A 8 A 4 5 N LEU A 11 ? N LEU A 9 O GLU A 70 ? O GLU A 68 A 5 6 N PHE A 73 ? N PHE A 71 O ARG A 119 ? O ARG A 117 A 6 7 O LEU A 118 ? O LEU A 116 N GLY A 110 ? N GLY A 108 A 7 8 O GLY A 105 ? O GLY A 103 N MSE A 102 ? N MSE A 100 # _database_PDB_matrix.entry_id 3RHE _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3RHE _atom_sites.fract_transf_matrix[1][1] 0.022969 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012869 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012045 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -1 ? ? ? A . n A 1 2 VAL 2 0 ? ? ? A . n A 1 3 MSE 3 1 ? ? ? A . n A 1 4 LEU 4 2 ? ? ? A . n A 1 5 SER 5 3 ? ? ? A . n A 1 6 ASP 6 4 ? ? ? A . n A 1 7 PRO 7 5 5 PRO PRO A . n A 1 8 ASN 8 6 6 ASN ASN A . n A 1 9 LEU 9 7 7 LEU LEU A . n A 1 10 VAL 10 8 8 VAL VAL A . n A 1 11 LEU 11 9 9 LEU LEU A . n A 1 12 PHE 12 10 10 PHE PHE A . n A 1 13 TYR 13 11 11 TYR TYR A . n A 1 14 VAL 14 12 12 VAL VAL A . n A 1 15 LYS 15 13 13 LYS LYS A . n A 1 16 ASN 16 14 14 ASN ASN A . n A 1 17 PRO 17 15 15 PRO PRO A . n A 1 18 ALA 18 16 16 ALA ALA A . n A 1 19 LYS 19 17 17 LYS LYS A . n A 1 20 SER 20 18 18 SER SER A . n A 1 21 GLU 21 19 19 GLU GLU A . n A 1 22 GLU 22 20 20 GLU GLU A . n A 1 23 PHE 23 21 21 PHE PHE A . n A 1 24 TYR 24 22 22 TYR TYR A . n A 1 25 LYS 25 23 23 LYS LYS A . n A 1 26 ASN 26 24 24 ASN ASN A . n A 1 27 LEU 27 25 25 LEU LEU A . n A 1 28 LEU 28 26 26 LEU LEU A . n A 1 29 ASP 29 27 27 ASP ASP A . n A 1 30 THR 30 28 28 THR THR A . n A 1 31 GLN 31 29 29 GLN GLN A . n A 1 32 PRO 32 30 30 PRO PRO A . n A 1 33 ILE 33 31 31 ILE ILE A . n A 1 34 GLU 34 32 32 GLU GLU A . n A 1 35 SER 35 33 33 SER SER A . n A 1 36 SER 36 34 34 SER SER A . n A 1 37 PRO 37 35 35 PRO PRO A . n A 1 38 THR 38 36 36 THR THR A . n A 1 39 PHE 39 37 37 PHE PHE A . n A 1 40 ALA 40 38 38 ALA ALA A . n A 1 41 MSE 41 39 39 MSE MSE A . n A 1 42 PHE 42 40 40 PHE PHE A . n A 1 43 VAL 43 41 41 VAL VAL A . n A 1 44 MSE 44 42 42 MSE MSE A . n A 1 45 LYS 45 43 43 LYS LYS A . n A 1 46 THR 46 44 44 THR THR A . n A 1 47 GLY 47 45 45 GLY GLY A . n A 1 48 LEU 48 46 46 LEU LEU A . n A 1 49 ARG 49 47 47 ARG ARG A . n A 1 50 LEU 50 48 48 LEU LEU A . n A 1 51 GLY 51 49 49 GLY GLY A . n A 1 52 LEU 52 50 50 LEU LEU A . n A 1 53 TRP 53 51 51 TRP TRP A . n A 1 54 ALA 54 52 52 ALA ALA A . n A 1 55 GLN 55 53 53 GLN GLN A . n A 1 56 GLU 56 54 54 GLU GLU A . n A 1 57 GLU 57 55 55 GLU GLU A . n A 1 58 ILE 58 56 56 ILE ILE A . n A 1 59 GLU 59 57 57 GLU GLU A . n A 1 60 PRO 60 58 58 PRO PRO A . n A 1 61 LYS 61 59 59 LYS LYS A . n A 1 62 ALA 62 60 60 ALA ALA A . n A 1 63 HIS 63 61 61 HIS HIS A . n A 1 64 GLN 64 62 ? ? ? A . n A 1 65 THR 65 63 ? ? ? A . n A 1 66 GLY 66 64 ? ? ? A . n A 1 67 GLY 67 65 ? ? ? A . n A 1 68 GLY 68 66 66 GLY GLY A . n A 1 69 MSE 69 67 67 MSE MSE A . n A 1 70 GLU 70 68 68 GLU GLU A . n A 1 71 LEU 71 69 69 LEU LEU A . n A 1 72 SER 72 70 70 SER SER A . n A 1 73 PHE 73 71 71 PHE PHE A . n A 1 74 GLN 74 72 72 GLN GLN A . n A 1 75 VAL 75 73 73 VAL VAL A . n A 1 76 ASN 76 74 74 ASN ASN A . n A 1 77 SER 77 75 75 SER SER A . n A 1 78 ASN 78 76 76 ASN ASN A . n A 1 79 GLU 79 77 77 GLU GLU A . n A 1 80 MSE 80 78 78 MSE MSE A . n A 1 81 VAL 81 79 79 VAL VAL A . n A 1 82 ASP 82 80 80 ASP ASP A . n A 1 83 GLU 83 81 81 GLU GLU A . n A 1 84 ILE 84 82 82 ILE ILE A . n A 1 85 HIS 85 83 83 HIS HIS A . n A 1 86 ARG 86 84 84 ARG ARG A . n A 1 87 GLN 87 85 85 GLN GLN A . n A 1 88 TRP 88 86 86 TRP TRP A . n A 1 89 SER 89 87 87 SER SER A . n A 1 90 ASP 90 88 88 ASP ASP A . n A 1 91 LYS 91 89 89 LYS LYS A . n A 1 92 GLU 92 90 90 GLU GLU A . n A 1 93 ILE 93 91 91 ILE ILE A . n A 1 94 SER 94 92 92 SER SER A . n A 1 95 ILE 95 93 93 ILE ILE A . n A 1 96 ILE 96 94 94 ILE ILE A . n A 1 97 GLN 97 95 95 GLN GLN A . n A 1 98 PRO 98 96 96 PRO PRO A . n A 1 99 PRO 99 97 97 PRO PRO A . n A 1 100 THR 100 98 98 THR THR A . n A 1 101 GLN 101 99 99 GLN GLN A . n A 1 102 MSE 102 100 100 MSE MSE A . n A 1 103 ASP 103 101 101 ASP ASP A . n A 1 104 PHE 104 102 102 PHE PHE A . n A 1 105 GLY 105 103 103 GLY GLY A . n A 1 106 TYR 106 104 104 TYR TYR A . n A 1 107 THR 107 105 105 THR THR A . n A 1 108 PHE 108 106 106 PHE PHE A . n A 1 109 VAL 109 107 107 VAL VAL A . n A 1 110 GLY 110 108 108 GLY GLY A . n A 1 111 VAL 111 109 109 VAL VAL A . n A 1 112 ASP 112 110 110 ASP ASP A . n A 1 113 PRO 113 111 111 PRO PRO A . n A 1 114 ASP 114 112 112 ASP ASP A . n A 1 115 GLU 115 113 113 GLU GLU A . n A 1 116 HIS 116 114 114 HIS HIS A . n A 1 117 ARG 117 115 115 ARG ARG A . n A 1 118 LEU 118 116 116 LEU LEU A . n A 1 119 ARG 119 117 117 ARG ARG A . n A 1 120 ILE 120 118 118 ILE ILE A . n A 1 121 PHE 121 119 119 PHE PHE A . n A 1 122 CYS 122 120 120 CYS CYS A . n A 1 123 LEU 123 121 121 LEU LEU A . n A 1 124 LYS 124 122 122 LYS LYS A . n A 1 125 ARG 125 123 ? ? ? A . n A 1 126 THR 126 124 ? ? ? A . n A 1 127 ALA 127 125 ? ? ? A . n A 1 128 GLU 128 126 ? ? ? A . n A 1 129 ASN 129 127 ? ? ? A . n A 1 130 LEU 130 128 ? ? ? A . n A 1 131 TYR 131 129 ? ? ? A . n A 1 132 PHE 132 130 ? ? ? A . n A 1 133 GLN 133 131 ? ? ? A . n A 1 134 SER 134 132 ? ? ? A . n A 1 135 HIS 135 133 ? ? ? A . n A 1 136 HIS 136 134 ? ? ? A . n A 1 137 HIS 137 135 ? ? ? A . n A 1 138 HIS 138 136 ? ? ? A . n A 1 139 HIS 139 137 ? ? ? A . n A 1 140 HIS 140 138 ? ? ? A . n A 1 141 TRP 141 139 ? ? ? A . n A 1 142 SER 142 140 ? ? ? A . n A 1 143 HIS 143 141 ? ? ? A . n A 1 144 PRO 144 142 ? ? ? A . n A 1 145 GLN 145 143 ? ? ? A . n A 1 146 PHE 146 144 ? ? ? A . n A 1 147 GLU 147 145 ? ? ? A . n A 1 148 LYS 148 146 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'New York Structural Genomics Research Consortium' _pdbx_SG_project.initial_of_center NYSGRC # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 41 A MSE 39 ? MET SELENOMETHIONINE 2 A MSE 44 A MSE 42 ? MET SELENOMETHIONINE 3 A MSE 69 A MSE 67 ? MET SELENOMETHIONINE 4 A MSE 80 A MSE 78 ? MET SELENOMETHIONINE 5 A MSE 102 A MSE 100 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B 2 1,2 A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 2670 ? 2 MORE -21 ? 2 'SSA (A^2)' 11310 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_566 x,-y+1,-z+1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 77.7070000000 0.0000000000 0.0000000000 -1.0000000000 83.0240000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 183 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-05-04 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-11-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CBASS 'data collection' . ? 1 SOLVE phasing . ? 2 PHENIX refinement '(phenix.refine)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -1 ? A MSE 1 2 1 Y 1 A VAL 0 ? A VAL 2 3 1 Y 1 A MSE 1 ? A MSE 3 4 1 Y 1 A LEU 2 ? A LEU 4 5 1 Y 1 A SER 3 ? A SER 5 6 1 Y 1 A ASP 4 ? A ASP 6 7 1 Y 1 A GLN 62 ? A GLN 64 8 1 Y 1 A THR 63 ? A THR 65 9 1 Y 1 A GLY 64 ? A GLY 66 10 1 Y 1 A GLY 65 ? A GLY 67 11 1 Y 1 A ARG 123 ? A ARG 125 12 1 Y 1 A THR 124 ? A THR 126 13 1 Y 1 A ALA 125 ? A ALA 127 14 1 Y 1 A GLU 126 ? A GLU 128 15 1 Y 1 A ASN 127 ? A ASN 129 16 1 Y 1 A LEU 128 ? A LEU 130 17 1 Y 1 A TYR 129 ? A TYR 131 18 1 Y 1 A PHE 130 ? A PHE 132 19 1 Y 1 A GLN 131 ? A GLN 133 20 1 Y 1 A SER 132 ? A SER 134 21 1 Y 1 A HIS 133 ? A HIS 135 22 1 Y 1 A HIS 134 ? A HIS 136 23 1 Y 1 A HIS 135 ? A HIS 137 24 1 Y 1 A HIS 136 ? A HIS 138 25 1 Y 1 A HIS 137 ? A HIS 139 26 1 Y 1 A HIS 138 ? A HIS 140 27 1 Y 1 A TRP 139 ? A TRP 141 28 1 Y 1 A SER 140 ? A SER 142 29 1 Y 1 A HIS 141 ? A HIS 143 30 1 Y 1 A PRO 142 ? A PRO 144 31 1 Y 1 A GLN 143 ? A GLN 145 32 1 Y 1 A PHE 144 ? A PHE 146 33 1 Y 1 A GLU 145 ? A GLU 147 34 1 Y 1 A LYS 146 ? A LYS 148 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 147 1 HOH HOH A . B 2 HOH 2 148 2 HOH HOH A . B 2 HOH 3 149 3 HOH HOH A . B 2 HOH 4 150 4 HOH HOH A . B 2 HOH 5 151 5 HOH HOH A . B 2 HOH 6 152 6 HOH HOH A . B 2 HOH 7 153 8 HOH HOH A . B 2 HOH 8 154 9 HOH HOH A . B 2 HOH 9 155 10 HOH HOH A . B 2 HOH 10 156 11 HOH HOH A . B 2 HOH 11 157 12 HOH HOH A . B 2 HOH 12 158 13 HOH HOH A . B 2 HOH 13 159 14 HOH HOH A . B 2 HOH 14 160 15 HOH HOH A . B 2 HOH 15 161 16 HOH HOH A . B 2 HOH 16 162 17 HOH HOH A . B 2 HOH 17 163 18 HOH HOH A . B 2 HOH 18 164 19 HOH HOH A . B 2 HOH 19 165 20 HOH HOH A . B 2 HOH 20 166 21 HOH HOH A . B 2 HOH 21 167 22 HOH HOH A . B 2 HOH 22 168 23 HOH HOH A . B 2 HOH 23 169 24 HOH HOH A . B 2 HOH 24 170 25 HOH HOH A . B 2 HOH 25 171 26 HOH HOH A . B 2 HOH 26 172 27 HOH HOH A . B 2 HOH 27 173 28 HOH HOH A . B 2 HOH 28 174 29 HOH HOH A . B 2 HOH 29 175 30 HOH HOH A . B 2 HOH 30 176 31 HOH HOH A . B 2 HOH 31 177 32 HOH HOH A . B 2 HOH 32 178 33 HOH HOH A . B 2 HOH 33 179 34 HOH HOH A . B 2 HOH 34 180 35 HOH HOH A . B 2 HOH 35 181 36 HOH HOH A . B 2 HOH 36 182 37 HOH HOH A . B 2 HOH 37 183 38 HOH HOH A . B 2 HOH 38 184 39 HOH HOH A . B 2 HOH 39 185 40 HOH HOH A . B 2 HOH 40 186 41 HOH HOH A . #