data_3RHU # _entry.id 3RHU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3RHU pdb_00003rhu 10.2210/pdb3rhu/pdb RCSB RCSB064949 ? ? WWPDB D_1000064949 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3RFN . unspecified PDB 3RI0 . unspecified PDB 3RIJ . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3RHU _pdbx_database_status.recvd_initial_deposition_date 2011-04-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Azoitei, M.L.' 1 'Ban, Y.A.' 2 'Julien, J.P.' 3 'Bryson, S.' 4 'Schroeter, A.' 5 'Kalyuzhniy, O.' 6 'Porter, J.R.' 7 'Adachi, Y.' 8 'Baker, D.' 9 'Szabo, E.' 10 'Pai, E.F.' 11 'Schief, W.R.' 12 # _citation.id primary _citation.title 'Computational design of high-affinity epitope scaffolds by backbone grafting of a linear epitope.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 415 _citation.page_first 175 _citation.page_last 192 _citation.year 2012 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22061265 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2011.10.003 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Azoitei, M.L.' 1 ? primary 'Ban, Y.E.' 2 ? primary 'Julien, J.P.' 3 ? primary 'Bryson, S.' 4 ? primary 'Schroeter, A.' 5 ? primary 'Kalyuzhniy, O.' 6 ? primary 'Porter, J.R.' 7 ? primary 'Adachi, Y.' 8 ? primary 'Baker, D.' 9 ? primary 'Pai, E.F.' 10 ? primary 'Schief, W.R.' 11 ? # _cell.entry_id 3RHU _cell.length_a 103.650 _cell.length_b 103.650 _cell.length_c 85.669 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3RHU _symmetry.space_group_name_H-M 'I 4' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description SC_1wnu _entity.formula_weight 18185.982 _entity.pdbx_number_of_molecules 2 _entity.pdbx_ec ? _entity.pdbx_mutation 'UNP M1S,V22T,L23A,E26D,Y31T' _entity.pdbx_fragment 'SEE REMARK 999' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SYSIEVRTHSALHVVKGAVVKTAGSDAKWTTSTYVKGNKGVLIVKAALEPDKWGIAAIEALANEKVKENAPIKIYELPRE EAEKMFGEDMYDLFPVPEDVRILKVVVIEDWNVNACNKEHTKTTGEIGPIKIRKVRFRKSKGLLEIHFELLELEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;SYSIEVRTHSALHVVKGAVVKTAGSDAKWTTSTYVKGNKGVLIVKAALEPDKWGIAAIEALANEKVKENAPIKIYELPRE EAEKMFGEDMYDLFPVPEDVRILKVVVIEDWNVNACNKEHTKTTGEIGPIKIRKVRFRKSKGLLEIHFELLELEHHHHHH ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 TYR n 1 3 SER n 1 4 ILE n 1 5 GLU n 1 6 VAL n 1 7 ARG n 1 8 THR n 1 9 HIS n 1 10 SER n 1 11 ALA n 1 12 LEU n 1 13 HIS n 1 14 VAL n 1 15 VAL n 1 16 LYS n 1 17 GLY n 1 18 ALA n 1 19 VAL n 1 20 VAL n 1 21 LYS n 1 22 THR n 1 23 ALA n 1 24 GLY n 1 25 SER n 1 26 ASP n 1 27 ALA n 1 28 LYS n 1 29 TRP n 1 30 THR n 1 31 THR n 1 32 SER n 1 33 THR n 1 34 TYR n 1 35 VAL n 1 36 LYS n 1 37 GLY n 1 38 ASN n 1 39 LYS n 1 40 GLY n 1 41 VAL n 1 42 LEU n 1 43 ILE n 1 44 VAL n 1 45 LYS n 1 46 ALA n 1 47 ALA n 1 48 LEU n 1 49 GLU n 1 50 PRO n 1 51 ASP n 1 52 LYS n 1 53 TRP n 1 54 GLY n 1 55 ILE n 1 56 ALA n 1 57 ALA n 1 58 ILE n 1 59 GLU n 1 60 ALA n 1 61 LEU n 1 62 ALA n 1 63 ASN n 1 64 GLU n 1 65 LYS n 1 66 VAL n 1 67 LYS n 1 68 GLU n 1 69 ASN n 1 70 ALA n 1 71 PRO n 1 72 ILE n 1 73 LYS n 1 74 ILE n 1 75 TYR n 1 76 GLU n 1 77 LEU n 1 78 PRO n 1 79 ARG n 1 80 GLU n 1 81 GLU n 1 82 ALA n 1 83 GLU n 1 84 LYS n 1 85 MET n 1 86 PHE n 1 87 GLY n 1 88 GLU n 1 89 ASP n 1 90 MET n 1 91 TYR n 1 92 ASP n 1 93 LEU n 1 94 PHE n 1 95 PRO n 1 96 VAL n 1 97 PRO n 1 98 GLU n 1 99 ASP n 1 100 VAL n 1 101 ARG n 1 102 ILE n 1 103 LEU n 1 104 LYS n 1 105 VAL n 1 106 VAL n 1 107 VAL n 1 108 ILE n 1 109 GLU n 1 110 ASP n 1 111 TRP n 1 112 ASN n 1 113 VAL n 1 114 ASN n 1 115 ALA n 1 116 CYS n 1 117 ASN n 1 118 LYS n 1 119 GLU n 1 120 HIS n 1 121 THR n 1 122 LYS n 1 123 THR n 1 124 THR n 1 125 GLY n 1 126 GLU n 1 127 ILE n 1 128 GLY n 1 129 PRO n 1 130 ILE n 1 131 LYS n 1 132 ILE n 1 133 ARG n 1 134 LYS n 1 135 VAL n 1 136 ARG n 1 137 PHE n 1 138 ARG n 1 139 LYS n 1 140 SER n 1 141 LYS n 1 142 GLY n 1 143 LEU n 1 144 LEU n 1 145 GLU n 1 146 ILE n 1 147 HIS n 1 148 PHE n 1 149 GLU n 1 150 LEU n 1 151 LEU n 1 152 GLU n 1 153 LEU n 1 154 GLU n 1 155 HIS n 1 156 HIS n 1 157 HIS n 1 158 HIS n 1 159 HIS n 1 160 HIS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? 1 45 ? ? 'alaXS, PH0574' ? 'ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3' ? ? ? ? 'Pyrococcus horikoshii' 70601 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 2 sample ? 61 154 ? ? 'alaXS, PH0574' ? 'ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3' ? ? ? ? 'Pyrococcus horikoshii' 70601 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP ALAXS_PYRHO O58307 1 MYSIEVRTHSALHVVKGAVVKVLGSEAKWTYSTYVKGNKGVLIVK 1 ? 2 UNP ALAXS_PYRHO O58307 1 ;LANEKVKENAPIKIYELPREEAEKMFGEDMYDLFPVPEDVRILKVVVIEDWNVNACNKEHTKTTGEIGPIKIRKVRFRKS KGLLEIHFELLELE ; 61 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3RHU A 1 ? 45 ? O58307 1 ? 45 ? 1 45 2 2 3RHU A 61 ? 154 ? O58307 61 ? 154 ? 61 154 3 1 3RHU B 1 ? 45 ? O58307 1 ? 45 ? 1 45 4 2 3RHU B 61 ? 154 ? O58307 61 ? 154 ? 61 154 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3RHU SER A 1 ? UNP O58307 MET 1 'engineered mutation' 1 1 1 3RHU THR A 22 ? UNP O58307 VAL 22 'engineered mutation' 22 2 1 3RHU ALA A 23 ? UNP O58307 LEU 23 'engineered mutation' 23 3 1 3RHU ASP A 26 ? UNP O58307 GLU 26 'engineered mutation' 26 4 1 3RHU THR A 31 ? UNP O58307 TYR 31 'engineered mutation' 31 5 2 3RHU HIS A 155 ? UNP O58307 ? ? 'expression tag' 155 6 2 3RHU HIS A 156 ? UNP O58307 ? ? 'expression tag' 156 7 2 3RHU HIS A 157 ? UNP O58307 ? ? 'expression tag' 157 8 2 3RHU HIS A 158 ? UNP O58307 ? ? 'expression tag' 158 9 2 3RHU HIS A 159 ? UNP O58307 ? ? 'expression tag' 159 10 2 3RHU HIS A 160 ? UNP O58307 ? ? 'expression tag' 160 11 3 3RHU SER B 1 ? UNP O58307 MET 1 'engineered mutation' 1 12 3 3RHU THR B 22 ? UNP O58307 VAL 22 'engineered mutation' 22 13 3 3RHU ALA B 23 ? UNP O58307 LEU 23 'engineered mutation' 23 14 3 3RHU ASP B 26 ? UNP O58307 GLU 26 'engineered mutation' 26 15 3 3RHU THR B 31 ? UNP O58307 TYR 31 'engineered mutation' 31 16 4 3RHU HIS B 155 ? UNP O58307 ? ? 'expression tag' 155 17 4 3RHU HIS B 156 ? UNP O58307 ? ? 'expression tag' 156 18 4 3RHU HIS B 157 ? UNP O58307 ? ? 'expression tag' 157 19 4 3RHU HIS B 158 ? UNP O58307 ? ? 'expression tag' 158 20 4 3RHU HIS B 159 ? UNP O58307 ? ? 'expression tag' 159 21 4 3RHU HIS B 160 ? UNP O58307 ? ? 'expression tag' 160 22 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3RHU _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.16 _exptl_crystal.density_percent_sol 61.11 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_details '2.8 M sodium chloride, 0.1 M Tris, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 93 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 300 mm plate' _diffrn_detector.pdbx_collection_date 2011-02-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SAGITALLY FOCUSED Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97949 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CLSI BEAMLINE 08ID-1' _diffrn_source.pdbx_synchrotron_site CLSI _diffrn_source.pdbx_synchrotron_beamline 08ID-1 _diffrn_source.pdbx_wavelength 0.97949 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3RHU _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 73.3 _reflns.d_resolution_high 2.80 _reflns.number_obs 11260 _reflns.number_all 11406 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.064 _reflns.pdbx_netI_over_sigmaI 26.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.80 _reflns_shell.d_res_low 2.90 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.365 _reflns_shell.meanI_over_sigI_obs 5.2 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3RHU _refine.ls_number_reflns_obs 10722 _refine.ls_number_reflns_all 10740 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 73.3 _refine.ls_d_res_high 2.80 _refine.ls_percent_reflns_obs 99.83 _refine.ls_R_factor_obs 0.28182 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.28027 _refine.ls_R_factor_R_free 0.31223 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 538 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.911 _refine.correlation_coeff_Fo_to_Fc_free 0.879 _refine.B_iso_mean 73.692 _refine.aniso_B[1][1] 3.27 _refine.aniso_B[2][2] 3.27 _refine.aniso_B[3][3] -6.53 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY ; _refine.pdbx_starting_model 'PDB ENTRY 1WNU' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.405 _refine.overall_SU_ML 0.430 _refine.overall_SU_B 22.695 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R 0.887 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2228 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2228 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 73.3 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.008 0.022 ? 2268 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.109 1.964 ? 3056 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 5.786 5.000 ? 278 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 38.762 24.667 ? 90 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 20.659 15.000 ? 440 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 18.952 15.000 ? 10 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.075 0.200 ? 352 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.003 0.021 ? 1624 ? 'X-RAY DIFFRACTION' r_mcbond_it 0.467 1.500 ? 1398 ? 'X-RAY DIFFRACTION' r_mcangle_it 0.864 2.000 ? 2260 ? 'X-RAY DIFFRACTION' r_scbond_it 0.723 3.000 ? 870 ? 'X-RAY DIFFRACTION' r_scangle_it 1.373 4.500 ? 796 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.798 _refine_ls_shell.d_res_low 2.870 _refine_ls_shell.number_reflns_R_work 771 _refine_ls_shell.R_factor_R_work 0.326 _refine_ls_shell.percent_reflns_obs 98.91 _refine_ls_shell.R_factor_R_free 0.395 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 46 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3RHU _struct.title 'Epitope backbone grafting by computational design for improved presentation of linear epitopes on scaffold proteins' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3RHU _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' _struct_keywords.text 'protein grafting, flexible backbone design, epitope-scaffold, HIV, immunogen design, DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 3 ? GLY A 24 ? SER A 3 GLY A 24 1 ? 22 HELX_P HELX_P2 2 SER A 25 ? ALA A 27 ? SER A 25 ALA A 27 5 ? 3 HELX_P HELX_P3 3 LYS A 52 ? GLU A 68 ? LYS A 52 GLU A 68 1 ? 17 HELX_P HELX_P4 4 GLU A 81 ? PHE A 86 ? GLU A 81 PHE A 86 1 ? 6 HELX_P HELX_P5 5 GLY A 87 ? TYR A 91 ? GLY A 87 TYR A 91 5 ? 5 HELX_P HELX_P6 6 THR A 124 ? GLY A 128 ? THR A 124 GLY A 128 5 ? 5 HELX_P HELX_P7 7 SER B 3 ? THR B 8 ? SER B 3 THR B 8 1 ? 6 HELX_P HELX_P8 8 SER B 10 ? GLY B 24 ? SER B 10 GLY B 24 1 ? 15 HELX_P HELX_P9 9 SER B 25 ? ALA B 27 ? SER B 25 ALA B 27 5 ? 3 HELX_P HELX_P10 10 ASP B 51 ? GLU B 68 ? ASP B 51 GLU B 68 1 ? 18 HELX_P HELX_P11 11 PRO B 78 ? LYS B 84 ? PRO B 78 LYS B 84 1 ? 7 HELX_P HELX_P12 12 THR B 123 ? GLY B 128 ? THR B 123 GLY B 128 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 3 ? C ? 4 ? D ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TRP A 29 ? LYS A 36 ? TRP A 29 LYS A 36 A 2 LYS A 39 ? LYS A 45 ? LYS A 39 LYS A 45 A 3 LEU A 143 ? LEU A 150 ? LEU A 143 LEU A 150 A 4 ILE A 130 ? ARG A 138 ? ILE A 130 ARG A 138 B 1 ILE A 72 ? LEU A 77 ? ILE A 72 LEU A 77 B 2 LEU A 103 ? ILE A 108 ? LEU A 103 ILE A 108 B 3 ASN A 112 ? ASN A 114 ? ASN A 112 ASN A 114 C 1 VAL B 35 ? LYS B 36 ? VAL B 35 LYS B 36 C 2 LYS B 39 ? LYS B 45 ? LYS B 39 LYS B 45 C 3 LEU B 143 ? LEU B 150 ? LEU B 143 LEU B 150 C 4 ILE B 130 ? ARG B 138 ? ILE B 130 ARG B 138 D 1 LYS B 73 ? TYR B 75 ? LYS B 73 TYR B 75 D 2 VAL B 105 ? ILE B 108 ? VAL B 105 ILE B 108 D 3 ASN B 112 ? ASN B 114 ? ASN B 112 ASN B 114 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TRP A 29 ? N TRP A 29 O LYS A 45 ? O LYS A 45 A 2 3 N VAL A 44 ? N VAL A 44 O LEU A 144 ? O LEU A 144 A 3 4 O GLU A 145 ? O GLU A 145 N ARG A 136 ? N ARG A 136 B 1 2 N LYS A 73 ? N LYS A 73 O VAL A 107 ? O VAL A 107 B 2 3 N VAL A 106 ? N VAL A 106 O ASN A 114 ? O ASN A 114 C 1 2 N LYS B 36 ? N LYS B 36 O LYS B 39 ? O LYS B 39 C 2 3 N VAL B 44 ? N VAL B 44 O LEU B 144 ? O LEU B 144 C 3 4 O GLU B 145 ? O GLU B 145 N ARG B 136 ? N ARG B 136 D 1 2 N LYS B 73 ? N LYS B 73 O VAL B 107 ? O VAL B 107 D 2 3 N VAL B 106 ? N VAL B 106 O ASN B 114 ? O ASN B 114 # _database_PDB_matrix.entry_id 3RHU _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3RHU _atom_sites.fract_transf_matrix[1][1] 0.009648 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009648 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011673 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 ? ? ? A . n A 1 2 TYR 2 2 2 TYR TYR A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 ILE 4 4 4 ILE ILE A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 ARG 7 7 7 ARG ARG A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 HIS 9 9 9 HIS HIS A . n A 1 10 SER 10 10 10 SER SER A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 HIS 13 13 13 HIS HIS A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 TRP 29 29 29 TRP TRP A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 THR 33 33 33 THR THR A . n A 1 34 TYR 34 34 34 TYR TYR A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 GLY 37 37 37 GLY GLY A . n A 1 38 ASN 38 38 38 ASN ASN A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 ILE 43 43 43 ILE ILE A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 TRP 53 53 53 TRP TRP A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 ASN 63 63 63 ASN ASN A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 LYS 67 67 67 LYS LYS A . n A 1 68 GLU 68 68 68 GLU GLU A . n A 1 69 ASN 69 69 69 ASN ASN A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 PRO 71 71 71 PRO PRO A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 ILE 74 74 74 ILE ILE A . n A 1 75 TYR 75 75 75 TYR TYR A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 PRO 78 78 78 PRO PRO A . n A 1 79 ARG 79 79 79 ARG ARG A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 GLU 81 81 81 GLU GLU A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 GLU 83 83 83 GLU GLU A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 MET 85 85 85 MET MET A . n A 1 86 PHE 86 86 86 PHE PHE A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 GLU 88 88 88 GLU GLU A . n A 1 89 ASP 89 89 89 ASP ASP A . n A 1 90 MET 90 90 90 MET MET A . n A 1 91 TYR 91 91 91 TYR TYR A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 LEU 93 93 ? ? ? A . n A 1 94 PHE 94 94 ? ? ? A . n A 1 95 PRO 95 95 ? ? ? A . n A 1 96 VAL 96 96 ? ? ? A . n A 1 97 PRO 97 97 ? ? ? A . n A 1 98 GLU 98 98 ? ? ? A . n A 1 99 ASP 99 99 ? ? ? A . n A 1 100 VAL 100 100 ? ? ? A . n A 1 101 ARG 101 101 ? ? ? A . n A 1 102 ILE 102 102 102 ILE ILE A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 LYS 104 104 104 LYS LYS A . n A 1 105 VAL 105 105 105 VAL VAL A . n A 1 106 VAL 106 106 106 VAL VAL A . n A 1 107 VAL 107 107 107 VAL VAL A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 GLU 109 109 109 GLU GLU A . n A 1 110 ASP 110 110 110 ASP ASP A . n A 1 111 TRP 111 111 111 TRP TRP A . n A 1 112 ASN 112 112 112 ASN ASN A . n A 1 113 VAL 113 113 113 VAL VAL A . n A 1 114 ASN 114 114 114 ASN ASN A . n A 1 115 ALA 115 115 115 ALA ALA A . n A 1 116 CYS 116 116 116 CYS CYS A . n A 1 117 ASN 117 117 117 ASN ASN A . n A 1 118 LYS 118 118 118 LYS LYS A . n A 1 119 GLU 119 119 119 GLU GLU A . n A 1 120 HIS 120 120 120 HIS HIS A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 LYS 122 122 122 LYS LYS A . n A 1 123 THR 123 123 123 THR THR A . n A 1 124 THR 124 124 124 THR THR A . n A 1 125 GLY 125 125 125 GLY GLY A . n A 1 126 GLU 126 126 126 GLU GLU A . n A 1 127 ILE 127 127 127 ILE ILE A . n A 1 128 GLY 128 128 128 GLY GLY A . n A 1 129 PRO 129 129 129 PRO PRO A . n A 1 130 ILE 130 130 130 ILE ILE A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 ILE 132 132 132 ILE ILE A . n A 1 133 ARG 133 133 133 ARG ARG A . n A 1 134 LYS 134 134 134 LYS LYS A . n A 1 135 VAL 135 135 135 VAL VAL A . n A 1 136 ARG 136 136 136 ARG ARG A . n A 1 137 PHE 137 137 137 PHE PHE A . n A 1 138 ARG 138 138 138 ARG ARG A . n A 1 139 LYS 139 139 139 LYS LYS A . n A 1 140 SER 140 140 140 SER SER A . n A 1 141 LYS 141 141 141 LYS LYS A . n A 1 142 GLY 142 142 142 GLY GLY A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 LEU 144 144 144 LEU LEU A . n A 1 145 GLU 145 145 145 GLU GLU A . n A 1 146 ILE 146 146 146 ILE ILE A . n A 1 147 HIS 147 147 147 HIS HIS A . n A 1 148 PHE 148 148 148 PHE PHE A . n A 1 149 GLU 149 149 149 GLU GLU A . n A 1 150 LEU 150 150 150 LEU LEU A . n A 1 151 LEU 151 151 151 LEU LEU A . n A 1 152 GLU 152 152 ? ? ? A . n A 1 153 LEU 153 153 ? ? ? A . n A 1 154 GLU 154 154 ? ? ? A . n A 1 155 HIS 155 155 ? ? ? A . n A 1 156 HIS 156 156 ? ? ? A . n A 1 157 HIS 157 157 ? ? ? A . n A 1 158 HIS 158 158 ? ? ? A . n A 1 159 HIS 159 159 ? ? ? A . n A 1 160 HIS 160 160 ? ? ? A . n B 1 1 SER 1 1 ? ? ? B . n B 1 2 TYR 2 2 2 TYR TYR B . n B 1 3 SER 3 3 3 SER SER B . n B 1 4 ILE 4 4 4 ILE ILE B . n B 1 5 GLU 5 5 5 GLU GLU B . n B 1 6 VAL 6 6 6 VAL VAL B . n B 1 7 ARG 7 7 7 ARG ARG B . n B 1 8 THR 8 8 8 THR THR B . n B 1 9 HIS 9 9 9 HIS HIS B . n B 1 10 SER 10 10 10 SER SER B . n B 1 11 ALA 11 11 11 ALA ALA B . n B 1 12 LEU 12 12 12 LEU LEU B . n B 1 13 HIS 13 13 13 HIS HIS B . n B 1 14 VAL 14 14 14 VAL VAL B . n B 1 15 VAL 15 15 15 VAL VAL B . n B 1 16 LYS 16 16 16 LYS LYS B . n B 1 17 GLY 17 17 17 GLY GLY B . n B 1 18 ALA 18 18 18 ALA ALA B . n B 1 19 VAL 19 19 19 VAL VAL B . n B 1 20 VAL 20 20 20 VAL VAL B . n B 1 21 LYS 21 21 21 LYS LYS B . n B 1 22 THR 22 22 22 THR THR B . n B 1 23 ALA 23 23 23 ALA ALA B . n B 1 24 GLY 24 24 24 GLY GLY B . n B 1 25 SER 25 25 25 SER SER B . n B 1 26 ASP 26 26 26 ASP ASP B . n B 1 27 ALA 27 27 27 ALA ALA B . n B 1 28 LYS 28 28 28 LYS LYS B . n B 1 29 TRP 29 29 29 TRP TRP B . n B 1 30 THR 30 30 30 THR THR B . n B 1 31 THR 31 31 31 THR THR B . n B 1 32 SER 32 32 32 SER SER B . n B 1 33 THR 33 33 33 THR THR B . n B 1 34 TYR 34 34 34 TYR TYR B . n B 1 35 VAL 35 35 35 VAL VAL B . n B 1 36 LYS 36 36 36 LYS LYS B . n B 1 37 GLY 37 37 37 GLY GLY B . n B 1 38 ASN 38 38 38 ASN ASN B . n B 1 39 LYS 39 39 39 LYS LYS B . n B 1 40 GLY 40 40 40 GLY GLY B . n B 1 41 VAL 41 41 41 VAL VAL B . n B 1 42 LEU 42 42 42 LEU LEU B . n B 1 43 ILE 43 43 43 ILE ILE B . n B 1 44 VAL 44 44 44 VAL VAL B . n B 1 45 LYS 45 45 45 LYS LYS B . n B 1 46 ALA 46 46 46 ALA ALA B . n B 1 47 ALA 47 47 47 ALA ALA B . n B 1 48 LEU 48 48 48 LEU LEU B . n B 1 49 GLU 49 49 49 GLU GLU B . n B 1 50 PRO 50 50 50 PRO PRO B . n B 1 51 ASP 51 51 51 ASP ASP B . n B 1 52 LYS 52 52 52 LYS LYS B . n B 1 53 TRP 53 53 53 TRP TRP B . n B 1 54 GLY 54 54 54 GLY GLY B . n B 1 55 ILE 55 55 55 ILE ILE B . n B 1 56 ALA 56 56 56 ALA ALA B . n B 1 57 ALA 57 57 57 ALA ALA B . n B 1 58 ILE 58 58 58 ILE ILE B . n B 1 59 GLU 59 59 59 GLU GLU B . n B 1 60 ALA 60 60 60 ALA ALA B . n B 1 61 LEU 61 61 61 LEU LEU B . n B 1 62 ALA 62 62 62 ALA ALA B . n B 1 63 ASN 63 63 63 ASN ASN B . n B 1 64 GLU 64 64 64 GLU GLU B . n B 1 65 LYS 65 65 65 LYS LYS B . n B 1 66 VAL 66 66 66 VAL VAL B . n B 1 67 LYS 67 67 67 LYS LYS B . n B 1 68 GLU 68 68 68 GLU GLU B . n B 1 69 ASN 69 69 69 ASN ASN B . n B 1 70 ALA 70 70 70 ALA ALA B . n B 1 71 PRO 71 71 71 PRO PRO B . n B 1 72 ILE 72 72 72 ILE ILE B . n B 1 73 LYS 73 73 73 LYS LYS B . n B 1 74 ILE 74 74 74 ILE ILE B . n B 1 75 TYR 75 75 75 TYR TYR B . n B 1 76 GLU 76 76 76 GLU GLU B . n B 1 77 LEU 77 77 77 LEU LEU B . n B 1 78 PRO 78 78 78 PRO PRO B . n B 1 79 ARG 79 79 79 ARG ARG B . n B 1 80 GLU 80 80 80 GLU GLU B . n B 1 81 GLU 81 81 81 GLU GLU B . n B 1 82 ALA 82 82 82 ALA ALA B . n B 1 83 GLU 83 83 83 GLU GLU B . n B 1 84 LYS 84 84 84 LYS LYS B . n B 1 85 MET 85 85 85 MET MET B . n B 1 86 PHE 86 86 86 PHE PHE B . n B 1 87 GLY 87 87 87 GLY GLY B . n B 1 88 GLU 88 88 88 GLU GLU B . n B 1 89 ASP 89 89 89 ASP ASP B . n B 1 90 MET 90 90 90 MET MET B . n B 1 91 TYR 91 91 91 TYR TYR B . n B 1 92 ASP 92 92 92 ASP ASP B . n B 1 93 LEU 93 93 ? ? ? B . n B 1 94 PHE 94 94 ? ? ? B . n B 1 95 PRO 95 95 ? ? ? B . n B 1 96 VAL 96 96 ? ? ? B . n B 1 97 PRO 97 97 ? ? ? B . n B 1 98 GLU 98 98 ? ? ? B . n B 1 99 ASP 99 99 ? ? ? B . n B 1 100 VAL 100 100 ? ? ? B . n B 1 101 ARG 101 101 ? ? ? B . n B 1 102 ILE 102 102 102 ILE ILE B . n B 1 103 LEU 103 103 103 LEU LEU B . n B 1 104 LYS 104 104 104 LYS LYS B . n B 1 105 VAL 105 105 105 VAL VAL B . n B 1 106 VAL 106 106 106 VAL VAL B . n B 1 107 VAL 107 107 107 VAL VAL B . n B 1 108 ILE 108 108 108 ILE ILE B . n B 1 109 GLU 109 109 109 GLU GLU B . n B 1 110 ASP 110 110 110 ASP ASP B . n B 1 111 TRP 111 111 111 TRP TRP B . n B 1 112 ASN 112 112 112 ASN ASN B . n B 1 113 VAL 113 113 113 VAL VAL B . n B 1 114 ASN 114 114 114 ASN ASN B . n B 1 115 ALA 115 115 115 ALA ALA B . n B 1 116 CYS 116 116 116 CYS CYS B . n B 1 117 ASN 117 117 117 ASN ASN B . n B 1 118 LYS 118 118 118 LYS LYS B . n B 1 119 GLU 119 119 119 GLU GLU B . n B 1 120 HIS 120 120 120 HIS HIS B . n B 1 121 THR 121 121 121 THR THR B . n B 1 122 LYS 122 122 122 LYS LYS B . n B 1 123 THR 123 123 123 THR THR B . n B 1 124 THR 124 124 124 THR THR B . n B 1 125 GLY 125 125 125 GLY GLY B . n B 1 126 GLU 126 126 126 GLU GLU B . n B 1 127 ILE 127 127 127 ILE ILE B . n B 1 128 GLY 128 128 128 GLY GLY B . n B 1 129 PRO 129 129 129 PRO PRO B . n B 1 130 ILE 130 130 130 ILE ILE B . n B 1 131 LYS 131 131 131 LYS LYS B . n B 1 132 ILE 132 132 132 ILE ILE B . n B 1 133 ARG 133 133 133 ARG ARG B . n B 1 134 LYS 134 134 134 LYS LYS B . n B 1 135 VAL 135 135 135 VAL VAL B . n B 1 136 ARG 136 136 136 ARG ARG B . n B 1 137 PHE 137 137 137 PHE PHE B . n B 1 138 ARG 138 138 138 ARG ARG B . n B 1 139 LYS 139 139 139 LYS LYS B . n B 1 140 SER 140 140 140 SER SER B . n B 1 141 LYS 141 141 141 LYS LYS B . n B 1 142 GLY 142 142 142 GLY GLY B . n B 1 143 LEU 143 143 143 LEU LEU B . n B 1 144 LEU 144 144 144 LEU LEU B . n B 1 145 GLU 145 145 145 GLU GLU B . n B 1 146 ILE 146 146 146 ILE ILE B . n B 1 147 HIS 147 147 147 HIS HIS B . n B 1 148 PHE 148 148 148 PHE PHE B . n B 1 149 GLU 149 149 149 GLU GLU B . n B 1 150 LEU 150 150 150 LEU LEU B . n B 1 151 LEU 151 151 151 LEU LEU B . n B 1 152 GLU 152 152 ? ? ? B . n B 1 153 LEU 153 153 ? ? ? B . n B 1 154 GLU 154 154 ? ? ? B . n B 1 155 HIS 155 155 ? ? ? B . n B 1 156 HIS 156 156 ? ? ? B . n B 1 157 HIS 157 157 ? ? ? B . n B 1 158 HIS 158 158 ? ? ? B . n B 1 159 HIS 159 159 ? ? ? B . n B 1 160 HIS 160 160 ? ? ? B . n # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 3 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A 2 1 B 3 1 A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 3 'ABSA (A^2)' 1810 ? 3 MORE -12 ? 3 'SSA (A^2)' 13900 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-11-09 2 'Structure model' 1 1 2011-11-23 3 'Structure model' 1 2 2012-01-18 4 'Structure model' 1 3 2017-07-26 5 'Structure model' 1 4 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Refinement description' 5 4 'Structure model' 'Source and taxonomy' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' diffrn_detector 2 4 'Structure model' entity_src_gen 3 4 'Structure model' software 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' database_2 7 5 'Structure model' pdbx_initial_refinement_model 8 5 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_diffrn_detector.detector' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal XDS 'data scaling' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.5.0109 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_entry_details.entry_id 3RHU _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;PROTEIN CONSTRUCT CONSISTS OF UNP RESIDUES 1-154 WITH A C-TERMINAL EXPRESSION TAG AND UNP RESIDUES 46-60 (FDRKPSDEEIREIER) REPLACED BY EPITOPE AALEPDKWGIAAIEA ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 34 ? ? 178.07 144.66 2 1 LYS A 52 ? ? 73.65 -49.34 3 1 ASN A 69 ? ? 38.35 62.94 4 1 GLU A 81 ? ? 66.78 -50.54 5 1 PHE A 86 ? ? -113.93 -92.43 6 1 TRP A 111 ? ? -150.42 -47.77 7 1 THR B 8 ? ? -66.29 48.03 8 1 HIS B 9 ? ? 161.43 111.65 9 1 SER B 10 ? ? 121.93 -51.32 10 1 SER B 32 ? ? 66.49 141.84 11 1 TYR B 34 ? ? -175.12 141.41 12 1 GLU B 76 ? ? -94.81 -81.82 13 1 LEU B 77 ? ? 43.01 164.94 14 1 MET B 85 ? ? 82.92 -67.08 15 1 PHE B 86 ? ? -108.30 -110.60 16 1 GLU B 88 ? ? 65.40 -79.14 17 1 TRP B 111 ? ? -155.66 -58.24 18 1 ASN B 117 ? ? -140.42 46.05 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 1 ? A SER 1 2 1 Y 1 A LEU 93 ? A LEU 93 3 1 Y 1 A PHE 94 ? A PHE 94 4 1 Y 1 A PRO 95 ? A PRO 95 5 1 Y 1 A VAL 96 ? A VAL 96 6 1 Y 1 A PRO 97 ? A PRO 97 7 1 Y 1 A GLU 98 ? A GLU 98 8 1 Y 1 A ASP 99 ? A ASP 99 9 1 Y 1 A VAL 100 ? A VAL 100 10 1 Y 1 A ARG 101 ? A ARG 101 11 1 Y 1 A GLU 152 ? A GLU 152 12 1 Y 1 A LEU 153 ? A LEU 153 13 1 Y 1 A GLU 154 ? A GLU 154 14 1 Y 1 A HIS 155 ? A HIS 155 15 1 Y 1 A HIS 156 ? A HIS 156 16 1 Y 1 A HIS 157 ? A HIS 157 17 1 Y 1 A HIS 158 ? A HIS 158 18 1 Y 1 A HIS 159 ? A HIS 159 19 1 Y 1 A HIS 160 ? A HIS 160 20 1 Y 1 B SER 1 ? B SER 1 21 1 Y 1 B LEU 93 ? B LEU 93 22 1 Y 1 B PHE 94 ? B PHE 94 23 1 Y 1 B PRO 95 ? B PRO 95 24 1 Y 1 B VAL 96 ? B VAL 96 25 1 Y 1 B PRO 97 ? B PRO 97 26 1 Y 1 B GLU 98 ? B GLU 98 27 1 Y 1 B ASP 99 ? B ASP 99 28 1 Y 1 B VAL 100 ? B VAL 100 29 1 Y 1 B ARG 101 ? B ARG 101 30 1 Y 1 B GLU 152 ? B GLU 152 31 1 Y 1 B LEU 153 ? B LEU 153 32 1 Y 1 B GLU 154 ? B GLU 154 33 1 Y 1 B HIS 155 ? B HIS 155 34 1 Y 1 B HIS 156 ? B HIS 156 35 1 Y 1 B HIS 157 ? B HIS 157 36 1 Y 1 B HIS 158 ? B HIS 158 37 1 Y 1 B HIS 159 ? B HIS 159 38 1 Y 1 B HIS 160 ? B HIS 160 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLU N N N N 88 GLU CA C N S 89 GLU C C N N 90 GLU O O N N 91 GLU CB C N N 92 GLU CG C N N 93 GLU CD C N N 94 GLU OE1 O N N 95 GLU OE2 O N N 96 GLU OXT O N N 97 GLU H H N N 98 GLU H2 H N N 99 GLU HA H N N 100 GLU HB2 H N N 101 GLU HB3 H N N 102 GLU HG2 H N N 103 GLU HG3 H N N 104 GLU HE2 H N N 105 GLU HXT H N N 106 GLY N N N N 107 GLY CA C N N 108 GLY C C N N 109 GLY O O N N 110 GLY OXT O N N 111 GLY H H N N 112 GLY H2 H N N 113 GLY HA2 H N N 114 GLY HA3 H N N 115 GLY HXT H N N 116 HIS N N N N 117 HIS CA C N S 118 HIS C C N N 119 HIS O O N N 120 HIS CB C N N 121 HIS CG C Y N 122 HIS ND1 N Y N 123 HIS CD2 C Y N 124 HIS CE1 C Y N 125 HIS NE2 N Y N 126 HIS OXT O N N 127 HIS H H N N 128 HIS H2 H N N 129 HIS HA H N N 130 HIS HB2 H N N 131 HIS HB3 H N N 132 HIS HD1 H N N 133 HIS HD2 H N N 134 HIS HE1 H N N 135 HIS HE2 H N N 136 HIS HXT H N N 137 ILE N N N N 138 ILE CA C N S 139 ILE C C N N 140 ILE O O N N 141 ILE CB C N S 142 ILE CG1 C N N 143 ILE CG2 C N N 144 ILE CD1 C N N 145 ILE OXT O N N 146 ILE H H N N 147 ILE H2 H N N 148 ILE HA H N N 149 ILE HB H N N 150 ILE HG12 H N N 151 ILE HG13 H N N 152 ILE HG21 H N N 153 ILE HG22 H N N 154 ILE HG23 H N N 155 ILE HD11 H N N 156 ILE HD12 H N N 157 ILE HD13 H N N 158 ILE HXT H N N 159 LEU N N N N 160 LEU CA C N S 161 LEU C C N N 162 LEU O O N N 163 LEU CB C N N 164 LEU CG C N N 165 LEU CD1 C N N 166 LEU CD2 C N N 167 LEU OXT O N N 168 LEU H H N N 169 LEU H2 H N N 170 LEU HA H N N 171 LEU HB2 H N N 172 LEU HB3 H N N 173 LEU HG H N N 174 LEU HD11 H N N 175 LEU HD12 H N N 176 LEU HD13 H N N 177 LEU HD21 H N N 178 LEU HD22 H N N 179 LEU HD23 H N N 180 LEU HXT H N N 181 LYS N N N N 182 LYS CA C N S 183 LYS C C N N 184 LYS O O N N 185 LYS CB C N N 186 LYS CG C N N 187 LYS CD C N N 188 LYS CE C N N 189 LYS NZ N N N 190 LYS OXT O N N 191 LYS H H N N 192 LYS H2 H N N 193 LYS HA H N N 194 LYS HB2 H N N 195 LYS HB3 H N N 196 LYS HG2 H N N 197 LYS HG3 H N N 198 LYS HD2 H N N 199 LYS HD3 H N N 200 LYS HE2 H N N 201 LYS HE3 H N N 202 LYS HZ1 H N N 203 LYS HZ2 H N N 204 LYS HZ3 H N N 205 LYS HXT H N N 206 MET N N N N 207 MET CA C N S 208 MET C C N N 209 MET O O N N 210 MET CB C N N 211 MET CG C N N 212 MET SD S N N 213 MET CE C N N 214 MET OXT O N N 215 MET H H N N 216 MET H2 H N N 217 MET HA H N N 218 MET HB2 H N N 219 MET HB3 H N N 220 MET HG2 H N N 221 MET HG3 H N N 222 MET HE1 H N N 223 MET HE2 H N N 224 MET HE3 H N N 225 MET HXT H N N 226 PHE N N N N 227 PHE CA C N S 228 PHE C C N N 229 PHE O O N N 230 PHE CB C N N 231 PHE CG C Y N 232 PHE CD1 C Y N 233 PHE CD2 C Y N 234 PHE CE1 C Y N 235 PHE CE2 C Y N 236 PHE CZ C Y N 237 PHE OXT O N N 238 PHE H H N N 239 PHE H2 H N N 240 PHE HA H N N 241 PHE HB2 H N N 242 PHE HB3 H N N 243 PHE HD1 H N N 244 PHE HD2 H N N 245 PHE HE1 H N N 246 PHE HE2 H N N 247 PHE HZ H N N 248 PHE HXT H N N 249 PRO N N N N 250 PRO CA C N S 251 PRO C C N N 252 PRO O O N N 253 PRO CB C N N 254 PRO CG C N N 255 PRO CD C N N 256 PRO OXT O N N 257 PRO H H N N 258 PRO HA H N N 259 PRO HB2 H N N 260 PRO HB3 H N N 261 PRO HG2 H N N 262 PRO HG3 H N N 263 PRO HD2 H N N 264 PRO HD3 H N N 265 PRO HXT H N N 266 SER N N N N 267 SER CA C N S 268 SER C C N N 269 SER O O N N 270 SER CB C N N 271 SER OG O N N 272 SER OXT O N N 273 SER H H N N 274 SER H2 H N N 275 SER HA H N N 276 SER HB2 H N N 277 SER HB3 H N N 278 SER HG H N N 279 SER HXT H N N 280 THR N N N N 281 THR CA C N S 282 THR C C N N 283 THR O O N N 284 THR CB C N R 285 THR OG1 O N N 286 THR CG2 C N N 287 THR OXT O N N 288 THR H H N N 289 THR H2 H N N 290 THR HA H N N 291 THR HB H N N 292 THR HG1 H N N 293 THR HG21 H N N 294 THR HG22 H N N 295 THR HG23 H N N 296 THR HXT H N N 297 TRP N N N N 298 TRP CA C N S 299 TRP C C N N 300 TRP O O N N 301 TRP CB C N N 302 TRP CG C Y N 303 TRP CD1 C Y N 304 TRP CD2 C Y N 305 TRP NE1 N Y N 306 TRP CE2 C Y N 307 TRP CE3 C Y N 308 TRP CZ2 C Y N 309 TRP CZ3 C Y N 310 TRP CH2 C Y N 311 TRP OXT O N N 312 TRP H H N N 313 TRP H2 H N N 314 TRP HA H N N 315 TRP HB2 H N N 316 TRP HB3 H N N 317 TRP HD1 H N N 318 TRP HE1 H N N 319 TRP HE3 H N N 320 TRP HZ2 H N N 321 TRP HZ3 H N N 322 TRP HH2 H N N 323 TRP HXT H N N 324 TYR N N N N 325 TYR CA C N S 326 TYR C C N N 327 TYR O O N N 328 TYR CB C N N 329 TYR CG C Y N 330 TYR CD1 C Y N 331 TYR CD2 C Y N 332 TYR CE1 C Y N 333 TYR CE2 C Y N 334 TYR CZ C Y N 335 TYR OH O N N 336 TYR OXT O N N 337 TYR H H N N 338 TYR H2 H N N 339 TYR HA H N N 340 TYR HB2 H N N 341 TYR HB3 H N N 342 TYR HD1 H N N 343 TYR HD2 H N N 344 TYR HE1 H N N 345 TYR HE2 H N N 346 TYR HH H N N 347 TYR HXT H N N 348 VAL N N N N 349 VAL CA C N S 350 VAL C C N N 351 VAL O O N N 352 VAL CB C N N 353 VAL CG1 C N N 354 VAL CG2 C N N 355 VAL OXT O N N 356 VAL H H N N 357 VAL H2 H N N 358 VAL HA H N N 359 VAL HB H N N 360 VAL HG11 H N N 361 VAL HG12 H N N 362 VAL HG13 H N N 363 VAL HG21 H N N 364 VAL HG22 H N N 365 VAL HG23 H N N 366 VAL HXT H N N 367 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLU N CA sing N N 83 GLU N H sing N N 84 GLU N H2 sing N N 85 GLU CA C sing N N 86 GLU CA CB sing N N 87 GLU CA HA sing N N 88 GLU C O doub N N 89 GLU C OXT sing N N 90 GLU CB CG sing N N 91 GLU CB HB2 sing N N 92 GLU CB HB3 sing N N 93 GLU CG CD sing N N 94 GLU CG HG2 sing N N 95 GLU CG HG3 sing N N 96 GLU CD OE1 doub N N 97 GLU CD OE2 sing N N 98 GLU OE2 HE2 sing N N 99 GLU OXT HXT sing N N 100 GLY N CA sing N N 101 GLY N H sing N N 102 GLY N H2 sing N N 103 GLY CA C sing N N 104 GLY CA HA2 sing N N 105 GLY CA HA3 sing N N 106 GLY C O doub N N 107 GLY C OXT sing N N 108 GLY OXT HXT sing N N 109 HIS N CA sing N N 110 HIS N H sing N N 111 HIS N H2 sing N N 112 HIS CA C sing N N 113 HIS CA CB sing N N 114 HIS CA HA sing N N 115 HIS C O doub N N 116 HIS C OXT sing N N 117 HIS CB CG sing N N 118 HIS CB HB2 sing N N 119 HIS CB HB3 sing N N 120 HIS CG ND1 sing Y N 121 HIS CG CD2 doub Y N 122 HIS ND1 CE1 doub Y N 123 HIS ND1 HD1 sing N N 124 HIS CD2 NE2 sing Y N 125 HIS CD2 HD2 sing N N 126 HIS CE1 NE2 sing Y N 127 HIS CE1 HE1 sing N N 128 HIS NE2 HE2 sing N N 129 HIS OXT HXT sing N N 130 ILE N CA sing N N 131 ILE N H sing N N 132 ILE N H2 sing N N 133 ILE CA C sing N N 134 ILE CA CB sing N N 135 ILE CA HA sing N N 136 ILE C O doub N N 137 ILE C OXT sing N N 138 ILE CB CG1 sing N N 139 ILE CB CG2 sing N N 140 ILE CB HB sing N N 141 ILE CG1 CD1 sing N N 142 ILE CG1 HG12 sing N N 143 ILE CG1 HG13 sing N N 144 ILE CG2 HG21 sing N N 145 ILE CG2 HG22 sing N N 146 ILE CG2 HG23 sing N N 147 ILE CD1 HD11 sing N N 148 ILE CD1 HD12 sing N N 149 ILE CD1 HD13 sing N N 150 ILE OXT HXT sing N N 151 LEU N CA sing N N 152 LEU N H sing N N 153 LEU N H2 sing N N 154 LEU CA C sing N N 155 LEU CA CB sing N N 156 LEU CA HA sing N N 157 LEU C O doub N N 158 LEU C OXT sing N N 159 LEU CB CG sing N N 160 LEU CB HB2 sing N N 161 LEU CB HB3 sing N N 162 LEU CG CD1 sing N N 163 LEU CG CD2 sing N N 164 LEU CG HG sing N N 165 LEU CD1 HD11 sing N N 166 LEU CD1 HD12 sing N N 167 LEU CD1 HD13 sing N N 168 LEU CD2 HD21 sing N N 169 LEU CD2 HD22 sing N N 170 LEU CD2 HD23 sing N N 171 LEU OXT HXT sing N N 172 LYS N CA sing N N 173 LYS N H sing N N 174 LYS N H2 sing N N 175 LYS CA C sing N N 176 LYS CA CB sing N N 177 LYS CA HA sing N N 178 LYS C O doub N N 179 LYS C OXT sing N N 180 LYS CB CG sing N N 181 LYS CB HB2 sing N N 182 LYS CB HB3 sing N N 183 LYS CG CD sing N N 184 LYS CG HG2 sing N N 185 LYS CG HG3 sing N N 186 LYS CD CE sing N N 187 LYS CD HD2 sing N N 188 LYS CD HD3 sing N N 189 LYS CE NZ sing N N 190 LYS CE HE2 sing N N 191 LYS CE HE3 sing N N 192 LYS NZ HZ1 sing N N 193 LYS NZ HZ2 sing N N 194 LYS NZ HZ3 sing N N 195 LYS OXT HXT sing N N 196 MET N CA sing N N 197 MET N H sing N N 198 MET N H2 sing N N 199 MET CA C sing N N 200 MET CA CB sing N N 201 MET CA HA sing N N 202 MET C O doub N N 203 MET C OXT sing N N 204 MET CB CG sing N N 205 MET CB HB2 sing N N 206 MET CB HB3 sing N N 207 MET CG SD sing N N 208 MET CG HG2 sing N N 209 MET CG HG3 sing N N 210 MET SD CE sing N N 211 MET CE HE1 sing N N 212 MET CE HE2 sing N N 213 MET CE HE3 sing N N 214 MET OXT HXT sing N N 215 PHE N CA sing N N 216 PHE N H sing N N 217 PHE N H2 sing N N 218 PHE CA C sing N N 219 PHE CA CB sing N N 220 PHE CA HA sing N N 221 PHE C O doub N N 222 PHE C OXT sing N N 223 PHE CB CG sing N N 224 PHE CB HB2 sing N N 225 PHE CB HB3 sing N N 226 PHE CG CD1 doub Y N 227 PHE CG CD2 sing Y N 228 PHE CD1 CE1 sing Y N 229 PHE CD1 HD1 sing N N 230 PHE CD2 CE2 doub Y N 231 PHE CD2 HD2 sing N N 232 PHE CE1 CZ doub Y N 233 PHE CE1 HE1 sing N N 234 PHE CE2 CZ sing Y N 235 PHE CE2 HE2 sing N N 236 PHE CZ HZ sing N N 237 PHE OXT HXT sing N N 238 PRO N CA sing N N 239 PRO N CD sing N N 240 PRO N H sing N N 241 PRO CA C sing N N 242 PRO CA CB sing N N 243 PRO CA HA sing N N 244 PRO C O doub N N 245 PRO C OXT sing N N 246 PRO CB CG sing N N 247 PRO CB HB2 sing N N 248 PRO CB HB3 sing N N 249 PRO CG CD sing N N 250 PRO CG HG2 sing N N 251 PRO CG HG3 sing N N 252 PRO CD HD2 sing N N 253 PRO CD HD3 sing N N 254 PRO OXT HXT sing N N 255 SER N CA sing N N 256 SER N H sing N N 257 SER N H2 sing N N 258 SER CA C sing N N 259 SER CA CB sing N N 260 SER CA HA sing N N 261 SER C O doub N N 262 SER C OXT sing N N 263 SER CB OG sing N N 264 SER CB HB2 sing N N 265 SER CB HB3 sing N N 266 SER OG HG sing N N 267 SER OXT HXT sing N N 268 THR N CA sing N N 269 THR N H sing N N 270 THR N H2 sing N N 271 THR CA C sing N N 272 THR CA CB sing N N 273 THR CA HA sing N N 274 THR C O doub N N 275 THR C OXT sing N N 276 THR CB OG1 sing N N 277 THR CB CG2 sing N N 278 THR CB HB sing N N 279 THR OG1 HG1 sing N N 280 THR CG2 HG21 sing N N 281 THR CG2 HG22 sing N N 282 THR CG2 HG23 sing N N 283 THR OXT HXT sing N N 284 TRP N CA sing N N 285 TRP N H sing N N 286 TRP N H2 sing N N 287 TRP CA C sing N N 288 TRP CA CB sing N N 289 TRP CA HA sing N N 290 TRP C O doub N N 291 TRP C OXT sing N N 292 TRP CB CG sing N N 293 TRP CB HB2 sing N N 294 TRP CB HB3 sing N N 295 TRP CG CD1 doub Y N 296 TRP CG CD2 sing Y N 297 TRP CD1 NE1 sing Y N 298 TRP CD1 HD1 sing N N 299 TRP CD2 CE2 doub Y N 300 TRP CD2 CE3 sing Y N 301 TRP NE1 CE2 sing Y N 302 TRP NE1 HE1 sing N N 303 TRP CE2 CZ2 sing Y N 304 TRP CE3 CZ3 doub Y N 305 TRP CE3 HE3 sing N N 306 TRP CZ2 CH2 doub Y N 307 TRP CZ2 HZ2 sing N N 308 TRP CZ3 CH2 sing Y N 309 TRP CZ3 HZ3 sing N N 310 TRP CH2 HH2 sing N N 311 TRP OXT HXT sing N N 312 TYR N CA sing N N 313 TYR N H sing N N 314 TYR N H2 sing N N 315 TYR CA C sing N N 316 TYR CA CB sing N N 317 TYR CA HA sing N N 318 TYR C O doub N N 319 TYR C OXT sing N N 320 TYR CB CG sing N N 321 TYR CB HB2 sing N N 322 TYR CB HB3 sing N N 323 TYR CG CD1 doub Y N 324 TYR CG CD2 sing Y N 325 TYR CD1 CE1 sing Y N 326 TYR CD1 HD1 sing N N 327 TYR CD2 CE2 doub Y N 328 TYR CD2 HD2 sing N N 329 TYR CE1 CZ doub Y N 330 TYR CE1 HE1 sing N N 331 TYR CE2 CZ sing Y N 332 TYR CE2 HE2 sing N N 333 TYR CZ OH sing N N 334 TYR OH HH sing N N 335 TYR OXT HXT sing N N 336 VAL N CA sing N N 337 VAL N H sing N N 338 VAL N H2 sing N N 339 VAL CA C sing N N 340 VAL CA CB sing N N 341 VAL CA HA sing N N 342 VAL C O doub N N 343 VAL C OXT sing N N 344 VAL CB CG1 sing N N 345 VAL CB CG2 sing N N 346 VAL CB HB sing N N 347 VAL CG1 HG11 sing N N 348 VAL CG1 HG12 sing N N 349 VAL CG1 HG13 sing N N 350 VAL CG2 HG21 sing N N 351 VAL CG2 HG22 sing N N 352 VAL CG2 HG23 sing N N 353 VAL OXT HXT sing N N 354 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1WNU _pdbx_initial_refinement_model.details 'PDB ENTRY 1WNU' #