HEADER LIPID TRANSPORT 13-APR-11 3RIC
TITLE CRYSTAL STRUCTURE OF D48V||A47D MUTANT OF HUMAN GLYCOLIPID TRANSFER
TITLE 2 PROTEIN COMPLEXED WITH 3-O-SULFO-GALACTOSYLCERAMIDE CONTAINING
TITLE 3 NERVONOYL ACYL CHAIN (24:1)
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: GLYCOLIPID TRANSFER PROTEIN;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: HUMAN GLYCOLIPID TRANSFER PROTEIN;
COMPND 5 SYNONYM: GLTP;
COMPND 6 EC: 2.7.7.7;
COMPND 7 ENGINEERED: YES;
COMPND 8 MUTATION: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: GLTP;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS GLTP FOLD, LIPID TRANSPORT
EXPDTA X-RAY DIFFRACTION
AUTHOR V.SAMYGINA,B.OCHOA-LIZARRALDE,D.J.PATEL,R.E.BROWN,L.MALININA
REVDAT 4 28-FEB-24 3RIC 1 REMARK SEQADV
REVDAT 3 08-NOV-17 3RIC 1 REMARK
REVDAT 2 20-JUN-12 3RIC 1 REMARK
REVDAT 1 08-FEB-12 3RIC 0
JRNL AUTH V.R.SAMYGINA,A.N.POPOV,A.CABO-BILBAO,B.OCHOA-LIZARRALDE,
JRNL AUTH 2 F.GONI-DE-CERIO,X.ZHAI,J.G.MOLOTKOVSKY,D.J.PATEL,R.E.BROWN,
JRNL AUTH 3 L.MALININA
JRNL TITL ENHANCED SELECTIVITY FOR SULFATIDE BY ENGINEERED HUMAN
JRNL TITL 2 GLYCOLIPID TRANSFER PROTEIN.
JRNL REF STRUCTURE V. 19 1644 2011
JRNL REFN ISSN 0969-2126
JRNL PMID 22078563
JRNL DOI 10.1016/J.STR.2011.09.011
REMARK 2
REMARK 2 RESOLUTION. 2.10 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.2.0019
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.98
REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL
REMARK 3 COMPLETENESS FOR RANGE (%) : 96.1
REMARK 3 NUMBER OF REFLECTIONS : 11300
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.184
REMARK 3 R VALUE (WORKING SET) : 0.182
REMARK 3 FREE R VALUE : 0.219
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800
REMARK 3 FREE R VALUE TEST SET COUNT : 570
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15
REMARK 3 REFLECTION IN BIN (WORKING SET) : 812
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.84
REMARK 3 BIN R VALUE (WORKING SET) : 0.2570
REMARK 3 BIN FREE R VALUE SET COUNT : 41
REMARK 3 BIN FREE R VALUE : 0.3410
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 1670
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 61
REMARK 3 SOLVENT ATOMS : 63
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.94
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -0.47000
REMARK 3 B22 (A**2) : 0.23000
REMARK 3 B33 (A**2) : 0.09000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : -0.14000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): 0.262
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.189
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.160
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.717
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1781 ; 0.017 ; 0.022
REMARK 3 BOND LENGTHS OTHERS (A): 1257 ; 0.001 ; 0.020
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2403 ; 1.658 ; 2.004
REMARK 3 BOND ANGLES OTHERS (DEGREES): 3090 ; 0.962 ; 3.000
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 206 ; 6.322 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 76 ;32.389 ;24.605
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 313 ;16.182 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;22.258 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 269 ; 0.095 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1877 ; 0.006 ; 0.020
REMARK 3 GENERAL PLANES OTHERS (A): 340 ; 0.001 ; 0.020
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 445 ; 0.215 ; 0.200
REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1238 ; 0.187 ; 0.200
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 865 ; 0.186 ; 0.200
REMARK 3 NON-BONDED TORSION OTHERS (A): 860 ; 0.089 ; 0.200
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 56 ; 0.151 ; 0.200
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 23 ; 0.176 ; 0.200
REMARK 3 SYMMETRY VDW OTHERS (A): 41 ; 0.242 ; 0.200
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.213 ; 0.200
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1352 ; 0.967 ; 1.500
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 411 ; 0.214 ; 1.500
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1685 ; 1.186 ; 2.000
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 875 ; 2.031 ; 3.000
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 718 ; 2.849 ; 4.500
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 1
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 NUMBER OF COMPONENTS GROUP : 3
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 401 A 463
REMARK 3 RESIDUE RANGE : A 301 A 301
REMARK 3 RESIDUE RANGE : A 3 A 209
REMARK 3 ORIGIN FOR THE GROUP (A): -10.7349 -0.8487 -14.9749
REMARK 3 T TENSOR
REMARK 3 T11: -0.0834 T22: -0.1527
REMARK 3 T33: -0.1791 T12: 0.0077
REMARK 3 T13: 0.0053 T23: 0.0672
REMARK 3 L TENSOR
REMARK 3 L11: 3.6979 L22: 2.8786
REMARK 3 L33: 1.6891 L12: -1.1342
REMARK 3 L13: 0.9295 L23: 0.4038
REMARK 3 S TENSOR
REMARK 3 S11: 0.1456 S12: -0.2158 S13: -0.2760
REMARK 3 S21: -0.2829 S22: 0.0401 S23: -0.0900
REMARK 3 S31: -0.0146 S32: 0.0287 S33: -0.1857
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : MASK
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.20
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING
REMARK 3 POSITIONS
REMARK 4
REMARK 4 3RIC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-APR-11.
REMARK 100 THE DEPOSITION ID IS D_1000064966.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 22-MAR-11
REMARK 200 TEMPERATURE (KELVIN) : 100.0
REMARK 200 PH : 5.1
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : N
REMARK 200 RADIATION SOURCE : ROTATING ANODE
REMARK 200 BEAMLINE : NULL
REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.54
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : IMAGE PLATE
REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO
REMARK 200 DATA SCALING SOFTWARE : SCALEPACK
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11907
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100
REMARK 200 RESOLUTION RANGE LOW (A) : 20.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0
REMARK 200 DATA REDUNDANCY : 4.600
REMARK 200 R MERGE (I) : 0.05000
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.2000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.17
REMARK 200 COMPLETENESS FOR SHELL (%) : 93.7
REMARK 200 DATA REDUNDANCY IN SHELL : 4.60
REMARK 200 R MERGE FOR SHELL (I) : 0.55000
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: MOLREP
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 44.61
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 15-20% PEG 3350, PH 5.1, VAPOR
REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 273K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,Y,-Z
REMARK 290 3555 X+1/2,Y+1/2,Z
REMARK 290 4555 -X+1/2,Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 38.43550
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.06400
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 38.43550
REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.06400
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 5580 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 19390 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -38.41872
REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -57.39597
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A 1
REMARK 465 ALA A 2
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375
REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.
REMARK 500
REMARK 500 DISTANCE CUTOFF:
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE
REMARK 500 O ASN A 170 O HOH A 410 3555 2.19
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ASN A 63 88.66 -157.92
REMARK 500 LYS A 167 88.66 0.68
REMARK 500 VAL A 185 -72.32 -50.70
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS
REMARK 500
REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH
REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED
REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND
REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES.
REMARK 500 MODEL OMEGA
REMARK 500 SER A 166 LYS A 167 -146.00
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIS A 301
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 2EVT RELATED DB: PDB
REMARK 900 RELATED ID: 1SWX RELATED DB: PDB
REMARK 900 RELATED ID: 3RWV RELATED DB: PDB
REMARK 900 RELATED ID: 3RZN RELATED DB: PDB
REMARK 900 RELATED ID: 3S0I RELATED DB: PDB
REMARK 900 RELATED ID: 3S0K RELATED DB: PDB
DBREF 3RIC A 1 209 UNP Q9NZD2 GLTP_HUMAN 1 209
SEQADV 3RIC ASP A 47 UNP Q9NZD2 ALA 47 ENGINEERED MUTATION
SEQADV 3RIC VAL A 48 UNP Q9NZD2 ASP 48 ENGINEERED MUTATION
SEQRES 1 A 209 MET ALA LEU LEU ALA GLU HIS LEU LEU LYS PRO LEU PRO
SEQRES 2 A 209 ALA ASP LYS GLN ILE GLU THR GLY PRO PHE LEU GLU ALA
SEQRES 3 A 209 VAL SER HIS LEU PRO PRO PHE PHE ASP CYS LEU GLY SER
SEQRES 4 A 209 PRO VAL PHE THR PRO ILE LYS ASP VAL ILE SER GLY ASN
SEQRES 5 A 209 ILE THR LYS ILE LYS ALA VAL TYR ASP THR ASN PRO ALA
SEQRES 6 A 209 LYS PHE ARG THR LEU GLN ASN ILE LEU GLU VAL GLU LYS
SEQRES 7 A 209 GLU MET TYR GLY ALA GLU TRP PRO LYS VAL GLY ALA THR
SEQRES 8 A 209 LEU ALA LEU MET TRP LEU LYS ARG GLY LEU ARG PHE ILE
SEQRES 9 A 209 GLN VAL PHE LEU GLN SER ILE CYS ASP GLY GLU ARG ASP
SEQRES 10 A 209 GLU ASN HIS PRO ASN LEU ILE ARG VAL ASN ALA THR LYS
SEQRES 11 A 209 ALA TYR GLU MET ALA LEU LYS LYS TYR HIS GLY TRP ILE
SEQRES 12 A 209 VAL GLN LYS ILE PHE GLN ALA ALA LEU TYR ALA ALA PRO
SEQRES 13 A 209 TYR LYS SER ASP PHE LEU LYS ALA LEU SER LYS GLY GLN
SEQRES 14 A 209 ASN VAL THR GLU GLU GLU CYS LEU GLU LYS ILE ARG LEU
SEQRES 15 A 209 PHE LEU VAL ASN TYR THR ALA THR ILE ASP VAL ILE TYR
SEQRES 16 A 209 GLU MET TYR THR GLN MET ASN ALA GLU LEU ASN TYR LYS
SEQRES 17 A 209 VAL
HET CIS A 301 61
HETNAM CIS (15Z)-N-((1S,2R,3E)-2-HYDROXY-1-{[(3-O-SULFO-BETA-D-
HETNAM 2 CIS GALACTOPYRANOSYL)OXY]METHYL}HEPTADEC-3-ENYL)TETRACOS-
HETNAM 3 CIS 15-ENAMIDE
HETSYN CIS (2S,3R,4E)-N-NERVONIC-1-[BETA-D-(3-SULFATE)-
HETSYN 2 CIS GALACTOPYRANOSYL]-2-AMINO-OCTADECENE-3-OL; CIS-
HETSYN 3 CIS TETRACOSENOYL SULFATIDE
FORMUL 2 CIS C48 H91 N O11 S
FORMUL 3 HOH *63(H2 O)
HELIX 1 1 LEU A 3 HIS A 7 5 5
HELIX 2 2 GLU A 19 SER A 28 1 10
HELIX 3 3 HIS A 29 CYS A 36 5 8
HELIX 4 4 SER A 39 VAL A 41 5 3
HELIX 5 5 PHE A 42 ASN A 63 1 22
HELIX 6 6 THR A 69 GLY A 82 1 14
HELIX 7 7 VAL A 88 ASP A 113 1 26
HELIX 8 8 ILE A 124 LEU A 136 1 13
HELIX 9 9 LYS A 137 HIS A 140 5 4
HELIX 10 10 GLY A 141 TYR A 153 1 13
HELIX 11 11 TYR A 157 SER A 166 1 10
HELIX 12 12 THR A 172 MET A 201 1 30
CISPEP 1 TRP A 85 PRO A 86 0 7.74
SITE 1 AC1 15 PHE A 34 VAL A 41 PHE A 42 ASN A 52
SITE 2 AC1 15 ALA A 93 TRP A 96 PHE A 103 ILE A 124
SITE 3 AC1 15 ALA A 128 HIS A 140 ILE A 147 TYR A 207
SITE 4 AC1 15 HOH A 404 HOH A 424 HOH A 447
CRYST1 76.871 48.128 69.086 90.00 123.82 90.00 C 1 2 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.013009 0.000000 0.008715 0.00000
SCALE2 0.000000 0.020778 0.000000 0.00000
SCALE3 0.000000 0.000000 0.017423 0.00000