HEADER OXIDOREDUCTASE 15-APR-11 3RJ8 TITLE CRYSTAL STRUCTURE OF CARBOHYDRATE OXIDASE FROM MICRODOCHIUM NIVALE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBOHYDRATE OXIDASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: MATURE ENZYME; COMPND 5 EC: 1.1.3.5; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MICRODOCHIUM NIVALE; SOURCE 3 ORGANISM_TAXID: 5520; SOURCE 4 STRAIN: NN008551; SOURCE 5 GENE: MNCO; SOURCE 6 EXPRESSION_SYSTEM: ASPERGILLUS ORYZAE; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 5062; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: JAL228; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PEJG33 KEYWDS FAD BINDING DOMAIN, BERBERINE AND BERBERINE-LIKE DOMAIN, KEYWDS 2 GLUCOOLIGOSACCHARIDE OXIDASE, FAD BINDING, CARBOHYDRATE/SUGAR KEYWDS 3 BINDING, EXTRACELLULAR, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR J.DUSKOVA,T.SKALOVA,A.STEPANKOVA,T.KOVAL,J.HASEK,L.H.OSTERGAARD, AUTHOR 2 C.C.FUGLSANG,P.KOLENKO,J.DOHNALEK REVDAT 6 20-NOV-24 3RJ8 1 REMARK REVDAT 5 20-SEP-23 3RJ8 1 REMARK REVDAT 4 22-FEB-23 3RJ8 1 COMPND HETSYN REVDAT 3 29-JUL-20 3RJ8 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 27-SEP-17 3RJ8 1 REMARK REVDAT 1 18-APR-12 3RJ8 0 JRNL AUTH J.DUSKOVA,T.SKALOVA,P.KOLENKO,A.STEPANKOVA,T.KOVAL,J.HASEK, JRNL AUTH 2 L.H.OSTERGAARD,C.C.FUGLSANG,J.DOHNALEK JRNL TITL CRYSTAL STRUCTURE AND KINETIC STUDIES OF CARBOHYDRATE JRNL TITL 2 OXIDASE FROM MICRODOCHIUM NIVALE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.DUSKOVA,J.DOHNALEK,T.SKALOVA,L.H.OSTERGAARD,C.C.FUGLSANG, REMARK 1 AUTH 2 P.KOLENKO,A.STEPANKOVA,J.HASEK REMARK 1 TITL CRYSTALLIZATION OF CARBOHYDRATE OXIDASE FROM MICRODOCHIUM REMARK 1 TITL 2 NIVALE. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. 65 638 2009 REMARK 1 REFN ESSN 1744-3091 REMARK 1 PMID 19478452 REMARK 1 DOI 10.1107/S1744309109017643 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0060 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : CCP4 6.1.3 STEREOCHEMISTRY LIBRARY REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 24502 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1777 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.47 REMARK 3 BIN R VALUE (WORKING SET) : 0.2320 REMARK 3 BIN FREE R VALUE SET COUNT : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3713 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 93 REMARK 3 SOLVENT ATOMS : 357 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.13000 REMARK 3 B22 (A**2) : -0.13000 REMARK 3 B33 (A**2) : -0.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.52000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.281 REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.103 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.504 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3970 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5421 ; 1.320 ; 1.962 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 486 ; 6.466 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 182 ;32.586 ;23.736 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 601 ;14.857 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;17.500 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 577 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3069 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STRUCTURE SOLUTION AND REFINEMENT WERE REMARK 3 PERFORMED USING FREE R FOR CROSS-VALIDATION THROUGHOUT: FREE R = REMARK 3 0.210 (FREE R = 0.300 FOR THE HIGHEST RESOLUTION SHELL) FROM A REMARK 3 RANDOM TEST SET COMPRISING 5% OF REFLECTIONS (1225 TOTAL). FINAL REMARK 3 REFINEMENT WAS PERFORMED USING ALL REFLECTIONS. REMARK 4 REMARK 4 3RJ8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-APR-11. REMARK 100 THE DEPOSITION ID IS D_1000064998. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-NOV-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8148 REMARK 200 MONOCHROMATOR : GE(111) TRIANGULAR BENT REMARK 200 COMPRESSING 7 FANKUCHEN CUT REMARK 200 OPTICS : ELLIPTICALLY BENT 12 QUARTZ REMARK 200 SEGMENTS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR555 FLAT PANEL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24502 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 15.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.09800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.36200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.420 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1ZR6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.01 M ZINC SULFATE, 0.1 M MES, 12% REMARK 280 PEG550 MME, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 66.85500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.48000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 66.85500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.48000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 ZN ZN A 601 LIES ON A SPECIAL POSITION. REMARK 375 ZN ZN A 602 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 67 -87.51 -105.37 REMARK 500 ALA A 241 113.01 -35.61 REMARK 500 VAL A 344 -73.34 -116.02 REMARK 500 TYR A 428 58.71 -110.68 REMARK 500 ARG A 432 49.80 -89.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 603 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 114 ND1 REMARK 620 2 ASP A 309 OD1 81.4 REMARK 620 3 ASP A 309 OD2 137.3 56.0 REMARK 620 4 HOH A 910 O 110.5 165.7 112.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 602 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 231 OE2 REMARK 620 2 ASP A 235 OD2 113.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 306 OD1 REMARK 620 2 HIS A 307 ND1 98.8 REMARK 620 N 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3RJA RELATED DB: PDB DBREF 3RJ8 A 1 473 PDB 3RJ8 3RJ8 1 473 SEQRES 1 A 473 GLY ALA ILE GLU ALA CYS LEU SER ALA ALA GLY VAL PRO SEQRES 2 A 473 ILE ASP ILE PRO GLY THR ALA ASP TYR GLU ARG ASP VAL SEQRES 3 A 473 GLU PRO PHE ASN ILE ARG LEU PRO TYR ILE PRO THR ALA SEQRES 4 A 473 ILE ALA GLN THR GLN THR THR ALA HIS ILE GLN SER ALA SEQRES 5 A 473 VAL GLN CYS ALA LYS LYS LEU ASN LEU LYS VAL SER ALA SEQRES 6 A 473 LYS SER GLY GLY HIS SER TYR ALA SER PHE GLY PHE GLY SEQRES 7 A 473 GLY GLU ASN GLY HIS LEU MET VAL GLN LEU ASP ARG MET SEQRES 8 A 473 ILE ASP VAL ILE SER TYR ASN ASP LYS THR GLY ILE ALA SEQRES 9 A 473 HIS VAL GLU PRO GLY ALA ARG LEU GLY HIS LEU ALA THR SEQRES 10 A 473 VAL LEU ASN ASP LYS TYR GLY ARG ALA ILE SER HIS GLY SEQRES 11 A 473 THR CYS PRO GLY VAL GLY ILE SER GLY HIS PHE ALA HIS SEQRES 12 A 473 GLY GLY PHE GLY PHE SER SER HIS MET HIS GLY LEU ALA SEQRES 13 A 473 VAL ASP SER VAL VAL GLY VAL THR VAL VAL LEU ALA ASP SEQRES 14 A 473 GLY ARG ILE VAL GLU ALA SER ALA THR GLU ASN ALA ASP SEQRES 15 A 473 LEU PHE TRP GLY ILE LYS GLY ALA GLY SER ASN PHE GLY SEQRES 16 A 473 ILE VAL ALA VAL TRP LYS LEU ALA THR PHE PRO ALA PRO SEQRES 17 A 473 LYS VAL LEU THR ARG PHE GLY VAL THR LEU ASN TRP LYS SEQRES 18 A 473 ASN LYS THR SER ALA LEU LYS GLY ILE GLU ALA VAL GLU SEQRES 19 A 473 ASP TYR ALA ARG TRP VAL ALA PRO ARG GLU VAL ASN PHE SEQRES 20 A 473 ARG ILE GLY ASP TYR GLY ALA GLY ASN PRO GLY ILE GLU SEQRES 21 A 473 GLY LEU TYR TYR GLY THR PRO GLU GLN TRP ARG ALA ALA SEQRES 22 A 473 PHE GLN PRO LEU LEU ASP THR LEU PRO ALA GLY TYR VAL SEQRES 23 A 473 VAL ASN PRO THR THR SER LEU ASN TRP ILE GLU SER VAL SEQRES 24 A 473 LEU SER TYR SER ASN PHE ASP HIS VAL ASP PHE ILE THR SEQRES 25 A 473 PRO GLN PRO VAL GLU ASN PHE TYR ALA LYS SER LEU THR SEQRES 26 A 473 LEU LYS SER ILE LYS GLY ASP ALA VAL LYS ASN PHE VAL SEQRES 27 A 473 ASP TYR TYR PHE ASP VAL SER ASN LYS VAL LYS ASP ARG SEQRES 28 A 473 PHE TRP PHE TYR GLN LEU ASP VAL HIS GLY GLY LYS ASN SEQRES 29 A 473 SER GLN VAL THR LYS VAL THR ASN ALA GLU THR ALA TYR SEQRES 30 A 473 PRO HIS ARG ASP LYS LEU TRP LEU ILE GLN PHE TYR ASP SEQRES 31 A 473 ARG TYR ASP ASN ASN GLN THR TYR PRO GLU THR SER PHE SEQRES 32 A 473 LYS PHE LEU ASP GLY TRP VAL ASN SER VAL THR LYS ALA SEQRES 33 A 473 LEU PRO LYS SER ASP TRP GLY MET TYR ILE ASN TYR ALA SEQRES 34 A 473 ASP PRO ARG MET ASP ARG ASP TYR ALA THR LYS VAL TYR SEQRES 35 A 473 TYR GLY GLU ASN LEU ALA ARG LEU GLN LYS LEU LYS ALA SEQRES 36 A 473 LYS PHE ASP PRO THR ASP ARG PHE TYR TYR PRO GLN ALA SEQRES 37 A 473 VAL ARG PRO VAL LYS MODRES 3RJ8 ASN A 222 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET FAD A 501 53 HET ZN A 601 1 HET ZN A 602 1 HET ZN A 603 1 HET K A 604 1 HET TRS A 605 8 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM ZN ZINC ION HETNAM K POTASSIUM ION HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN TRS TRIS BUFFER FORMUL 2 NAG 2(C8 H15 N O6) FORMUL 3 FAD C27 H33 N9 O15 P2 FORMUL 4 ZN 3(ZN 2+) FORMUL 7 K K 1+ FORMUL 8 TRS C4 H12 N O3 1+ FORMUL 9 HOH *357(H2 O) HELIX 1 1 GLY A 1 ALA A 10 1 10 HELIX 2 2 THR A 19 VAL A 26 1 8 HELIX 3 3 THR A 45 LEU A 59 1 15 HELIX 4 4 SER A 74 GLY A 78 5 5 HELIX 5 5 ARG A 111 GLY A 124 1 14 HELIX 6 6 GLY A 136 GLY A 144 1 9 HELIX 7 7 SER A 149 GLY A 154 1 6 HELIX 8 8 LEU A 155 ASP A 158 5 4 HELIX 9 9 ASN A 180 GLY A 191 1 12 HELIX 10 10 SER A 192 PHE A 194 5 3 HELIX 11 11 ASN A 222 VAL A 240 1 19 HELIX 12 12 THR A 266 ASP A 279 1 14 HELIX 13 13 ASN A 294 TYR A 302 1 9 HELIX 14 14 GLY A 331 VAL A 344 1 14 HELIX 15 15 SER A 345 VAL A 348 5 4 HELIX 16 16 SER A 365 VAL A 370 5 6 HELIX 17 17 PRO A 399 SER A 402 5 4 HELIX 18 18 PHE A 403 LYS A 415 1 13 HELIX 19 19 ALA A 416 LEU A 417 5 2 HELIX 20 20 PRO A 418 SER A 420 5 3 HELIX 21 21 TYR A 425 ALA A 429 5 5 HELIX 22 22 ASP A 434 GLY A 444 1 11 HELIX 23 23 ASN A 446 ASP A 458 1 13 SHEET 1 A 3 ALA A 39 GLN A 42 0 SHEET 2 A 3 LEU A 84 GLN A 87 1 O MET A 85 N ALA A 39 SHEET 3 A 3 VAL A 63 LYS A 66 1 N SER A 64 O VAL A 86 SHEET 1 B 5 VAL A 94 TYR A 97 0 SHEET 2 B 5 ILE A 103 VAL A 106 -1 O HIS A 105 N SER A 96 SHEET 3 B 5 ILE A 196 ALA A 203 -1 O LEU A 202 N ALA A 104 SHEET 4 B 5 VAL A 160 VAL A 166 -1 N THR A 164 O ALA A 198 SHEET 5 B 5 ILE A 172 ALA A 175 -1 O VAL A 173 N VAL A 165 SHEET 1 C 2 ARG A 125 ALA A 126 0 SHEET 2 C 2 PHE A 205 PRO A 206 -1 O PHE A 205 N ALA A 126 SHEET 1 D 3 VAL A 286 VAL A 287 0 SHEET 2 D 3 LEU A 211 THR A 217 -1 N THR A 217 O VAL A 286 SHEET 3 D 3 THR A 291 LEU A 293 -1 O LEU A 293 N LEU A 211 SHEET 1 E 8 VAL A 286 VAL A 287 0 SHEET 2 E 8 LEU A 211 THR A 217 -1 N THR A 217 O VAL A 286 SHEET 3 E 8 GLY A 258 TYR A 263 -1 O TYR A 263 N THR A 212 SHEET 4 E 8 VAL A 245 ASP A 251 -1 N GLY A 250 O GLY A 258 SHEET 5 E 8 PHE A 352 VAL A 359 -1 O LEU A 357 N ILE A 249 SHEET 6 E 8 TRP A 384 TYR A 392 -1 O LEU A 385 N ASP A 358 SHEET 7 E 8 ASN A 318 LEU A 326 -1 N TYR A 320 O ASP A 390 SHEET 8 E 8 TRP A 422 GLY A 423 -1 O GLY A 423 N THR A 325 LINK ND1 HIS A 70 C8M FAD A 501 1555 1555 1.49 LINK SG CYS A 132 C6 FAD A 501 1555 1555 1.80 LINK ND2 ASN A 222 C1 NAG B 1 1555 1555 1.45 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 LINK O ILE A 36 K K A 604 1555 1555 2.85 LINK ND1 HIS A 114 ZN ZN A 603 1555 1555 2.15 LINK OE2 GLU A 231 ZN ZN A 602 1555 1555 2.00 LINK OD2 ASP A 235 ZN ZN A 602 1555 1555 2.07 LINK OD1 ASP A 306 ZN ZN A 601 1555 1555 1.89 LINK ND1 HIS A 307 ZN ZN A 601 1555 1555 2.07 LINK OD1 ASP A 309 ZN ZN A 603 1555 1555 2.27 LINK OD2 ASP A 309 ZN ZN A 603 1555 1555 2.39 LINK ZN ZN A 603 O HOH A 910 1555 1555 2.55 CRYST1 133.710 56.960 87.050 90.00 95.85 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007479 0.000000 0.000766 0.00000 SCALE2 0.000000 0.017556 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011548 0.00000 CONECT 272 3845 CONECT 522 3824 CONECT 856 3844 CONECT 992 3820 CONECT 1659 3761 CONECT 1724 3843 CONECT 1753 3843 CONECT 2329 3842 CONECT 2337 3842 CONECT 2354 3844 CONECT 2355 3844 CONECT 3761 1659 3762 3772 CONECT 3762 3761 3763 3769 CONECT 3763 3762 3764 3770 CONECT 3764 3763 3765 3771 CONECT 3765 3764 3766 3772 CONECT 3766 3765 3773 CONECT 3767 3768 3769 3774 CONECT 3768 3767 CONECT 3769 3762 3767 CONECT 3770 3763 CONECT 3771 3764 3775 CONECT 3772 3761 3765 CONECT 3773 3766 CONECT 3774 3767 CONECT 3775 3771 3776 3786 CONECT 3776 3775 3777 3783 CONECT 3777 3776 3778 3784 CONECT 3778 3777 3779 3785 CONECT 3779 3778 3780 3786 CONECT 3780 3779 3787 CONECT 3781 3782 3783 3788 CONECT 3782 3781 CONECT 3783 3776 3781 CONECT 3784 3777 CONECT 3785 3778 CONECT 3786 3775 3779 CONECT 3787 3780 CONECT 3788 3781 CONECT 3789 3790 3791 3792 3841 CONECT 3790 3789 CONECT 3791 3789 CONECT 3792 3789 3793 CONECT 3793 3792 3794 CONECT 3794 3793 3795 3796 CONECT 3795 3794 3800 CONECT 3796 3794 3797 3798 CONECT 3797 3796 CONECT 3798 3796 3799 3800 CONECT 3799 3798 CONECT 3800 3795 3798 3801 CONECT 3801 3800 3802 3810 CONECT 3802 3801 3803 CONECT 3803 3802 3804 CONECT 3804 3803 3805 3810 CONECT 3805 3804 3806 3807 CONECT 3806 3805 CONECT 3807 3805 3808 CONECT 3808 3807 3809 CONECT 3809 3808 3810 CONECT 3810 3801 3804 3809 CONECT 3811 3812 3828 CONECT 3812 3811 3813 3814 CONECT 3813 3812 CONECT 3814 3812 3815 CONECT 3815 3814 3816 3817 CONECT 3816 3815 CONECT 3817 3815 3818 3828 CONECT 3818 3817 3819 CONECT 3819 3818 3820 3826 CONECT 3820 992 3819 3821 CONECT 3821 3820 3822 3823 CONECT 3822 3821 CONECT 3823 3821 3824 3825 CONECT 3824 522 3823 CONECT 3825 3823 3826 CONECT 3826 3819 3825 3827 CONECT 3827 3826 3828 3829 CONECT 3828 3811 3817 3827 CONECT 3829 3827 3830 CONECT 3830 3829 3831 3832 CONECT 3831 3830 CONECT 3832 3830 3833 3834 CONECT 3833 3832 CONECT 3834 3832 3835 3836 CONECT 3835 3834 CONECT 3836 3834 3837 CONECT 3837 3836 3838 CONECT 3838 3837 3839 3840 3841 CONECT 3839 3838 CONECT 3840 3838 CONECT 3841 3789 3838 CONECT 3842 2329 2337 CONECT 3843 1724 1753 CONECT 3844 856 2354 2355 4157 CONECT 3845 272 CONECT 3846 3847 3848 3849 3850 CONECT 3847 3846 3851 CONECT 3848 3846 3852 CONECT 3849 3846 3853 CONECT 3850 3846 CONECT 3851 3847 CONECT 3852 3848 CONECT 3853 3849 CONECT 4157 3844 MASTER 311 0 8 23 21 0 0 6 4163 1 105 37 END