HEADER OXIDOREDUCTASE 15-APR-11 3RJB OBSLTE 23-JAN-13 3RJB 4IQI TITLE CRYSTAL STRUCTURE OF 7-CYANO-7-DEAZAGUANINE REDUCTASE, QUEF FROM TITLE 2 VIBRIO CHOLERAE O1 BIOVAR EL TOR COMPLEXED WITH CYTOSINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 7-CYANO-7-DEAZAGUANINE REDUCTASE QUEF; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE O1 BIOVAR EL TOR; SOURCE 3 ORGANISM_TAXID: 243277; SOURCE 4 STRAIN: N16961; SOURCE 5 GENE: QUEF; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, TUNNELLING FOLD, ROSSMAN FOLD, CYTOSOL, KEYWDS 3 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,M.ZHOU,M.GU,W.F.ANDERSON,A.JOACHIMIAK,CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 2 23-JAN-13 3RJB 1 OBSLTE REVDAT 1 10-AUG-11 3RJB 0 JRNL AUTH Y.KIM,M.ZHOU,M.GU,W.F.ANDERSON,A.JOACHIMIAK,CSGID JRNL TITL CRYSTAL STRUCTURE OF 7-CYANO-7-DEAZAGUANINE REDUCTASE, QUEF JRNL TITL 2 FROM VIBRIO CHOLERAE O1 BIOVAR EL TOR COMPLEXED WITH JRNL TITL 3 CYTOSINE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7_650) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 51468 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 2618 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.9127 - 3.9945 0.99 2706 147 0.1747 0.2197 REMARK 3 2 3.9945 - 3.1722 1.00 2617 149 0.1453 0.1578 REMARK 3 3 3.1722 - 2.7717 1.00 2633 143 0.1651 0.1954 REMARK 3 4 2.7717 - 2.5185 1.00 2611 131 0.1649 0.1908 REMARK 3 5 2.5185 - 2.3381 1.00 2589 139 0.1516 0.1990 REMARK 3 6 2.3381 - 2.2003 1.00 2573 145 0.1398 0.1559 REMARK 3 7 2.2003 - 2.0901 1.00 2604 137 0.1376 0.1514 REMARK 3 8 2.0901 - 1.9992 1.00 2579 131 0.1340 0.1570 REMARK 3 9 1.9992 - 1.9222 1.00 2586 123 0.1283 0.1488 REMARK 3 10 1.9222 - 1.8559 1.00 2563 135 0.1261 0.1575 REMARK 3 11 1.8559 - 1.7979 1.00 2588 121 0.1335 0.1890 REMARK 3 12 1.7979 - 1.7465 1.00 2554 136 0.1371 0.1829 REMARK 3 13 1.7465 - 1.7006 1.00 2567 129 0.1405 0.2115 REMARK 3 14 1.7006 - 1.6591 1.00 2585 134 0.1496 0.1973 REMARK 3 15 1.6591 - 1.6214 1.00 2539 149 0.1439 0.1815 REMARK 3 16 1.6214 - 1.5869 1.00 2577 144 0.1604 0.1948 REMARK 3 17 1.5869 - 1.5551 1.00 2543 151 0.1839 0.2076 REMARK 3 18 1.5551 - 1.5258 0.99 2526 134 0.2171 0.2623 REMARK 3 19 1.5258 - 1.4985 0.91 2310 140 0.2620 0.3127 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 41.47 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.70880 REMARK 3 B22 (A**2) : -2.08700 REMARK 3 B33 (A**2) : -3.62170 REMARK 3 B12 (A**2) : -0.00000 REMARK 3 B13 (A**2) : -0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2325 REMARK 3 ANGLE : 1.480 3187 REMARK 3 CHIRALITY : 0.120 342 REMARK 3 PLANARITY : 0.009 435 REMARK 3 DIHEDRAL : 15.687 878 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3RJB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-APR-11. REMARK 100 THE RCSB ID CODE IS RCSB065001. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-OCT-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51496 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07400 REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.37300 REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL3000, MOLREP REMARK 200 STARTING MODEL: PDBID 3BP1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM CHLORIDE, 0.1 M TRIS REMARK 280 PH 8.5, 16 % (W/V) PEG4000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.59300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 36.59300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 45.51250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.07500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 45.51250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.07500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 36.59300 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 45.51250 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 48.07500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 36.59300 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 45.51250 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 48.07500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE DIMER IS FORMED BY APPLYING OPERATION OF X,Y,Z AND X,- REMARK 300 Y,-Z REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A 293 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 427 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 ASN A 2 REMARK 465 ARG A 3 REMARK 465 LEU A 4 REMARK 465 LYS A 5 REMARK 465 ASN A 6 REMARK 465 MSE A 7 REMARK 465 SER A 8 REMARK 465 LYS A 9 REMARK 465 TYR A 10 REMARK 465 SER A 11 REMARK 465 ASP A 12 REMARK 465 ALA A 13 REMARK 465 LYS A 14 REMARK 465 GLU A 15 REMARK 465 LEU A 16 REMARK 465 ALA A 17 REMARK 465 SER A 18 REMARK 465 LEU A 19 REMARK 465 THR A 20 REMARK 465 LEU A 21 REMARK 465 GLY A 22 REMARK 465 LYS A 23 REMARK 465 LYS A 24 REMARK 465 THR A 25 REMARK 465 GLU A 26 REMARK 465 TYR A 27 REMARK 465 ALA A 28 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 65 O HOH A 301 1.97 REMARK 500 OE2 GLU A 82 O HOH A 583 2.15 REMARK 500 ND2 ASN A 281 O HOH A 351 2.17 REMARK 500 OD1 ASN A 140 O HOH A 493 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 144 -0.70 73.34 REMARK 500 ILE A 196 -119.19 65.89 REMARK 500 ASN A 198 -3.06 77.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ASN A 281 10.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 GLU A 66 22.8 L L OUTSIDE RANGE REMARK 500 ASN A 281 22.4 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 292 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 348 O REMARK 620 2 HOH A 347 O 108.7 REMARK 620 3 HOH A 606 O 166.8 84.1 REMARK 620 4 HOH A 617 O 90.0 65.4 92.8 REMARK 620 5 HOH A 346 O 88.2 151.7 78.9 92.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CYT A 291 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 292 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 293 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3BP1 RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH GUANINE REMARK 900 RELATED ID: 3RJ4 RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITHOUT ANY LIGAND BOUND REMARK 900 RELATED ID: IDP01750 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE REFERENCE DOES NOT EXIST IN UNIPROT, THUS IS SELF- REMARK 999 REFERENCED. AUTHOR INDICATED THE GENBANK REFEREINCE OF GI 9655358 REMARK 999 AND ACCESSION AAF94064. DBREF 3RJB A -2 287 PDB 3RJB 3RJB 1 290 SEQRES 1 A 290 SER ASN ALA MSE ASN ARG LEU LYS ASN MSE SER LYS TYR SEQRES 2 A 290 SER ASP ALA LYS GLU LEU ALA SER LEU THR LEU GLY LYS SEQRES 3 A 290 LYS THR GLU TYR ALA ASN GLN TYR ASP PRO SER LEU LEU SEQRES 4 A 290 GLN PRO VAL PRO ARG SER LEU ASN ARG ASN ASP LEU HIS SEQRES 5 A 290 LEU SER ALA THR LEU PRO PHE GLN GLY CYS ASP ILE TRP SEQRES 6 A 290 THR LEU TYR GLU LEU SER TRP LEU ASN GLN LYS GLY LEU SEQRES 7 A 290 PRO GLN VAL ALA ILE GLY GLU VAL SER ILE PRO ALA THR SEQRES 8 A 290 SER ALA ASN LEU ILE GLU SER LYS SER PHE LYS LEU TYR SEQRES 9 A 290 LEU ASN SER TYR ASN GLN THR ARG PHE ALA SER TRP ASP SEQRES 10 A 290 GLU VAL GLN THR ARG LEU VAL HIS ASP LEU SER ALA CYS SEQRES 11 A 290 ALA GLY GLU THR VAL THR VAL ASN VAL LYS SER LEU ASN SEQRES 12 A 290 GLU TYR THR ALA GLU PRO ILE VAL THR MSE GLN GLY GLU SEQRES 13 A 290 CYS ILE ASP ASP GLN ASP ILE GLU ILE ALA ASN TYR GLU SEQRES 14 A 290 PHE ASP ASP ALA LEU LEU GLN GLY ALA ALA GLN GLY GLU SEQRES 15 A 290 GLU VAL SER GLU VAL LEU HIS SER HIS LEU LEU LYS SER SEQRES 16 A 290 ASN CYS LEU ILE THR ASN GLN PRO ASP TRP GLY SER VAL SEQRES 17 A 290 GLU ILE ALA TYR HIS GLY ALA LYS MSE ASN ARG GLU ALA SEQRES 18 A 290 LEU LEU ARG TYR LEU VAL SER PHE ARG GLU HIS ASN GLU SEQRES 19 A 290 PHE HIS GLU GLN CYS VAL GLU ARG ILE PHE THR ASP ILE SEQRES 20 A 290 MSE ARG TYR CYS GLN PRO GLN SER LEU THR VAL TYR ALA SEQRES 21 A 290 ARG TYR THR ARG ARG GLY GLY LEU ASP ILE ASN PRO PHE SEQRES 22 A 290 ARG SER SER HIS GLN SER ALA PRO ASN HIS ASN GLN ARG SEQRES 23 A 290 MSE ALA ARG GLN MODRES 3RJB MSE A 150 MET SELENOMETHIONINE MODRES 3RJB MSE A 214 MET SELENOMETHIONINE MODRES 3RJB MSE A 245 MET SELENOMETHIONINE MODRES 3RJB MSE A 284 MET SELENOMETHIONINE HET MSE A 150 8 HET MSE A 214 8 HET MSE A 245 16 HET MSE A 284 8 HET CYT A 291 8 HET ZN A 292 1 HET CL A 293 1 HETNAM MSE SELENOMETHIONINE HETNAM CYT 6-AMINOPYRIMIDIN-2(1H)-ONE HETNAM ZN ZINC ION HETNAM CL CHLORIDE ION HETSYN CYT CYTOSINE FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 2 CYT C4 H5 N3 O FORMUL 3 ZN ZN 2+ FORMUL 4 CL CL 1- FORMUL 5 HOH *352(H2 O) HELIX 1 1 ASP A 32 LEU A 36 5 5 HELIX 2 2 ARG A 41 LEU A 48 1 8 HELIX 3 3 GLU A 94 SER A 104 1 11 HELIX 4 4 SER A 112 GLY A 129 1 18 HELIX 5 5 ASN A 140 THR A 143 5 4 HELIX 6 6 ASP A 168 GLN A 173 5 6 HELIX 7 7 ASN A 215 SER A 225 1 11 HELIX 8 8 PHE A 232 GLN A 249 1 18 SHEET 1 A 2 PRO A 38 PRO A 40 0 SHEET 2 A 2 ASN A 91 ILE A 93 -1 O LEU A 92 N VAL A 39 SHEET 1 B 8 THR A 133 SER A 138 0 SHEET 2 B 8 PRO A 76 PRO A 86 -1 N ILE A 80 O LYS A 137 SHEET 3 B 8 GLN A 57 LEU A 70 -1 N LEU A 64 O GLY A 81 SHEET 4 B 8 LEU A 265 SER A 272 -1 O PHE A 270 N CYS A 59 SHEET 5 B 8 SER A 252 TYR A 259 -1 N VAL A 255 O ARG A 271 SHEET 6 B 8 PRO A 200 MSE A 214 -1 N GLU A 206 O TYR A 256 SHEET 7 B 8 ALA A 176 CYS A 194 -1 N LEU A 185 O ILE A 207 SHEET 8 B 8 GLU A 153 CYS A 154 1 N GLU A 153 O VAL A 184 SHEET 1 C 8 THR A 133 SER A 138 0 SHEET 2 C 8 PRO A 76 PRO A 86 -1 N ILE A 80 O LYS A 137 SHEET 3 C 8 GLN A 57 LEU A 70 -1 N LEU A 64 O GLY A 81 SHEET 4 C 8 LEU A 265 SER A 272 -1 O PHE A 270 N CYS A 59 SHEET 5 C 8 SER A 252 TYR A 259 -1 N VAL A 255 O ARG A 271 SHEET 6 C 8 PRO A 200 MSE A 214 -1 N GLU A 206 O TYR A 256 SHEET 7 C 8 ALA A 176 CYS A 194 -1 N LEU A 185 O ILE A 207 SHEET 8 C 8 ASN A 230 GLU A 231 1 O GLU A 231 N ASN A 193 LINK C THR A 149 N MSE A 150 1555 1555 1.33 LINK C MSE A 150 N AGLN A 151 1555 1555 1.33 LINK C MSE A 150 N BGLN A 151 1555 1555 1.33 LINK C LYS A 213 N MSE A 214 1555 1555 1.33 LINK C MSE A 214 N ASN A 215 1555 1555 1.33 LINK C ILE A 244 N AMSE A 245 1555 1555 1.33 LINK C ILE A 244 N BMSE A 245 1555 1555 1.33 LINK C AMSE A 245 N AARG A 246 1555 1555 1.33 LINK C BMSE A 245 N BARG A 246 1555 1555 1.33 LINK C ARG A 283 N MSE A 284 1555 1555 1.32 LINK C MSE A 284 N ALA A 285 1555 1555 1.33 LINK ZN ZN A 292 O HOH A 348 1555 1555 2.25 LINK ZN ZN A 292 O HOH A 347 1555 1555 2.34 LINK ZN ZN A 292 O HOH A 606 1555 1555 2.44 LINK ZN ZN A 292 O HOH A 617 1555 1555 2.45 LINK ZN ZN A 292 O HOH A 346 1555 1555 2.50 SITE 1 AC1 9 TRP A 62 LEU A 92 ILE A 93 GLU A 94 SITE 2 AC1 9 SER A 95 PHE A 232 HIS A 233 GLU A 234 SITE 3 AC1 9 ILE A 267 SITE 1 AC2 6 HOH A 346 HOH A 347 HOH A 348 HOH A 599 SITE 2 AC2 6 HOH A 606 HOH A 617 SITE 1 AC3 1 GLY A 263 CRYST1 91.025 96.150 73.186 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010986 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010400 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013664 0.00000