data_3RJV # _entry.id 3RJV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3RJV pdb_00003rjv 10.2210/pdb3rjv/pdb RCSB RCSB065021 ? ? WWPDB D_1000065021 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 390073 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3RJV _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-04-15 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Crystal structure of a Putative Sel1 repeat protein (KPN_04481) from Klebsiella pneumoniae subsp. pneumoniae MGH 78578 at 1.65 A resolution ; _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3RJV _cell.length_a 81.508 _cell.length_b 81.508 _cell.length_c 83.343 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3RJV _symmetry.Int_Tables_number 152 _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative Sel1 repeat protein' 23153.980 1 ? ? 'sequence database residues 18-228' ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 7 ? ? ? ? 3 water nat water 18.015 174 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Uncharacterized protein yjcO' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GATEPGSQYQQQAEAGDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIRNPQQADYPQARQLAEKAV EAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQ(MSE)LLGLIYASGVHGPEDDVKASEYFKGSS SLSRTGYAEYWAG(MSE)(MSE)FQQGEKGFIEPNKQKALHWLNVSCLEGFDTGCEEFDRISKG ; _entity_poly.pdbx_seq_one_letter_code_can ;GATEPGSQYQQQAEAGDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIRNPQQADYPQARQLAEKAV EAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSLSR TGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFDTGCEEFDRISKG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 390073 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 THR n 1 4 GLU n 1 5 PRO n 1 6 GLY n 1 7 SER n 1 8 GLN n 1 9 TYR n 1 10 GLN n 1 11 GLN n 1 12 GLN n 1 13 ALA n 1 14 GLU n 1 15 ALA n 1 16 GLY n 1 17 ASP n 1 18 ARG n 1 19 ARG n 1 20 ALA n 1 21 GLN n 1 22 TYR n 1 23 TYR n 1 24 LEU n 1 25 ALA n 1 26 ASP n 1 27 THR n 1 28 TRP n 1 29 VAL n 1 30 SER n 1 31 SER n 1 32 GLY n 1 33 ASP n 1 34 TYR n 1 35 GLN n 1 36 LYS n 1 37 ALA n 1 38 GLU n 1 39 TYR n 1 40 TRP n 1 41 ALA n 1 42 GLN n 1 43 LYS n 1 44 ALA n 1 45 ALA n 1 46 ALA n 1 47 GLN n 1 48 GLY n 1 49 ASP n 1 50 GLY n 1 51 ASP n 1 52 ALA n 1 53 LEU n 1 54 ALA n 1 55 LEU n 1 56 LEU n 1 57 ALA n 1 58 GLN n 1 59 LEU n 1 60 LYS n 1 61 ILE n 1 62 ARG n 1 63 ASN n 1 64 PRO n 1 65 GLN n 1 66 GLN n 1 67 ALA n 1 68 ASP n 1 69 TYR n 1 70 PRO n 1 71 GLN n 1 72 ALA n 1 73 ARG n 1 74 GLN n 1 75 LEU n 1 76 ALA n 1 77 GLU n 1 78 LYS n 1 79 ALA n 1 80 VAL n 1 81 GLU n 1 82 ALA n 1 83 GLY n 1 84 SER n 1 85 LYS n 1 86 SER n 1 87 GLY n 1 88 GLU n 1 89 ILE n 1 90 VAL n 1 91 LEU n 1 92 ALA n 1 93 ARG n 1 94 VAL n 1 95 LEU n 1 96 VAL n 1 97 ASN n 1 98 ARG n 1 99 GLN n 1 100 ALA n 1 101 GLY n 1 102 ALA n 1 103 THR n 1 104 ASP n 1 105 VAL n 1 106 ALA n 1 107 HIS n 1 108 ALA n 1 109 ILE n 1 110 THR n 1 111 LEU n 1 112 LEU n 1 113 GLN n 1 114 ASP n 1 115 ALA n 1 116 ALA n 1 117 ARG n 1 118 ASP n 1 119 SER n 1 120 GLU n 1 121 SER n 1 122 ASP n 1 123 ALA n 1 124 ALA n 1 125 VAL n 1 126 ASP n 1 127 ALA n 1 128 GLN n 1 129 MSE n 1 130 LEU n 1 131 LEU n 1 132 GLY n 1 133 LEU n 1 134 ILE n 1 135 TYR n 1 136 ALA n 1 137 SER n 1 138 GLY n 1 139 VAL n 1 140 HIS n 1 141 GLY n 1 142 PRO n 1 143 GLU n 1 144 ASP n 1 145 ASP n 1 146 VAL n 1 147 LYS n 1 148 ALA n 1 149 SER n 1 150 GLU n 1 151 TYR n 1 152 PHE n 1 153 LYS n 1 154 GLY n 1 155 SER n 1 156 SER n 1 157 SER n 1 158 LEU n 1 159 SER n 1 160 ARG n 1 161 THR n 1 162 GLY n 1 163 TYR n 1 164 ALA n 1 165 GLU n 1 166 TYR n 1 167 TRP n 1 168 ALA n 1 169 GLY n 1 170 MSE n 1 171 MSE n 1 172 PHE n 1 173 GLN n 1 174 GLN n 1 175 GLY n 1 176 GLU n 1 177 LYS n 1 178 GLY n 1 179 PHE n 1 180 ILE n 1 181 GLU n 1 182 PRO n 1 183 ASN n 1 184 LYS n 1 185 GLN n 1 186 LYS n 1 187 ALA n 1 188 LEU n 1 189 HIS n 1 190 TRP n 1 191 LEU n 1 192 ASN n 1 193 VAL n 1 194 SER n 1 195 CYS n 1 196 LEU n 1 197 GLU n 1 198 GLY n 1 199 PHE n 1 200 ASP n 1 201 THR n 1 202 GLY n 1 203 CYS n 1 204 GLU n 1 205 GLU n 1 206 PHE n 1 207 ASP n 1 208 ARG n 1 209 ILE n 1 210 SER n 1 211 LYS n 1 212 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'yjcO, KPN78578_44120, KPN_04481' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 700721 / MGH 78578' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Klebsiella pneumoniae subsp. pneumoniae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 272620 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A6TH02_KLEP7 _struct_ref.pdbx_db_accession A6TH02 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ATEPGSQYQQQAEAGDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIRNPQQADYPQARQLAEKAVE AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSLSRT GYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFDTGCEEFDRISKG ; _struct_ref.pdbx_align_begin 18 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3RJV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 212 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A6TH02 _struct_ref_seq.db_align_beg 18 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 228 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 18 _struct_ref_seq.pdbx_auth_seq_align_end 228 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3RJV _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code A6TH02 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3RJV # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.45 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 64.36 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '10.00% Glycerol, 1.2600M tri-Sodium Citrate, 0.1M HEPES pH 7.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Vertical focusing mirror; double crystal Si(111) monochromator' _diffrn_detector.pdbx_collection_date 2011-03-23 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.96109 1.0 2 0.97932 1.0 3 0.97915 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL14-1 _diffrn_source.type 'SSRL BEAMLINE BL14-1' _diffrn_source.pdbx_wavelength_list 0.96109,0.97932,0.97915 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3RJV _reflns.d_resolution_high 1.65 _reflns.d_resolution_low 29.136 _reflns.number_all 38945 _reflns.number_obs 38945 _reflns.pdbx_netI_over_sigmaI 10.900 _reflns.pdbx_Rsym_value 0.076 _reflns.pdbx_redundancy 6.100 _reflns.percent_possible_obs 99.900 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.pdbx_Rmerge_I_obs ? _reflns.B_iso_Wilson_estimate 27.423 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.650 1.690 ? 17523 ? 0.782 1.0 0.782 ? 6.100 ? 2855 100.000 1 1 1.690 1.740 ? 17129 ? 0.655 1.2 0.655 ? 6.100 ? 2787 100.000 2 1 1.740 1.790 ? 16454 ? 0.510 1.5 0.510 ? 6.200 ? 2672 100.000 3 1 1.790 1.840 ? 16270 ? 0.398 1.9 0.398 ? 6.200 ? 2632 100.000 4 1 1.840 1.910 ? 15778 ? 0.320 2.3 0.320 ? 6.200 ? 2559 100.000 5 1 1.910 1.970 ? 15215 ? 0.260 2.8 0.260 ? 6.200 ? 2464 100.000 6 1 1.970 2.050 ? 14795 ? 0.197 3.5 0.197 ? 6.200 ? 2386 100.000 7 1 2.050 2.130 ? 14231 ? 0.155 4.3 0.155 ? 6.200 ? 2301 100.000 8 1 2.130 2.220 ? 13521 ? 0.133 5.0 0.133 ? 6.200 ? 2188 100.000 9 1 2.220 2.330 ? 13094 ? 0.120 5.5 0.120 ? 6.200 ? 2117 100.000 10 1 2.330 2.460 ? 12340 ? 0.113 5.7 0.113 ? 6.200 ? 1996 100.000 11 1 2.460 2.610 ? 11888 ? 0.104 6.0 0.104 ? 6.200 ? 1920 100.000 12 1 2.610 2.790 ? 11081 ? 0.089 6.9 0.089 ? 6.200 ? 1787 100.000 13 1 2.790 3.010 ? 10431 ? 0.077 8.3 0.077 ? 6.200 ? 1679 100.000 14 1 3.010 3.300 ? 9568 ? 0.066 9.9 0.066 ? 6.200 ? 1553 100.000 15 1 3.300 3.690 ? 8673 ? 0.059 10.7 0.059 ? 6.100 ? 1411 100.000 16 1 3.690 4.260 ? 7636 ? 0.051 12.6 0.051 ? 6.100 ? 1256 100.000 17 1 4.260 5.220 ? 6427 ? 0.047 14.0 0.047 ? 6.000 ? 1073 99.900 18 1 5.220 7.380 ? 5010 ? 0.049 13.8 0.049 ? 5.900 ? 851 99.800 19 1 7.380 29.136 ? 2214 ? 0.042 16.3 0.042 ? 4.800 ? 458 92.900 20 1 # _refine.entry_id 3RJV _refine.ls_d_res_high 1.6500 _refine.ls_d_res_low 29.136 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.8000 _refine.ls_number_reflns_obs 38890 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. ETHYLENE GLYCOL (EDO) MODELED ARE PRESENT IN CRYO CONDITION. 4. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1717 _refine.ls_R_factor_R_work 0.1706 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1936 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_number_reflns_R_free 1950 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 31.6678 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.5000 _refine.aniso_B[2][2] 0.5000 _refine.aniso_B[3][3] -0.7500 _refine.aniso_B[1][2] 0.2500 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9710 _refine.correlation_coeff_Fo_to_Fc_free 0.9650 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free 0.0740 _refine.overall_SU_ML 0.0510 _refine.overall_SU_B 3.1310 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 92.130 _refine.B_iso_min 10.790 _refine.occupancy_max 1.000 _refine.occupancy_min 0.330 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R 0.074 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1592 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 174 _refine_hist.number_atoms_total 1794 _refine_hist.d_res_high 1.6500 _refine_hist.d_res_low 29.136 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1791 0.015 0.022 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1232 0.002 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2437 1.436 1.949 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 3012 1.051 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 248 5.232 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 94 40.136 25.106 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 302 13.131 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 12 16.977 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 254 0.089 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2095 0.007 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 365 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1098 1.818 3.000 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 452 0.527 3.000 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1755 3.043 5.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 693 4.736 8.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 662 7.356 11.000 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.6500 _refine_ls_shell.d_res_low 1.6930 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.7500 _refine_ls_shell.number_reflns_R_work 2705 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.3160 _refine_ls_shell.R_factor_R_free 0.3150 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 140 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2845 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3RJV _struct.title 'Crystal structure of a putative sel1 repeat protein (kpn_04481) from Klebsiella pneumoniae subsp. pneumoniae at 1.65 a resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;ALPHA-ALPHA SUPERHELIX, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-BIOLOGY, PROTEIN BINDING ; _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.entry_id 3RJV # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 6 ? ALA A 15 ? GLY A 22 ALA A 31 1 ? 10 HELX_P HELX_P2 2 ASP A 17 ? GLY A 32 ? ASP A 33 GLY A 48 1 ? 16 HELX_P HELX_P3 3 ASP A 33 ? GLN A 47 ? ASP A 49 GLN A 63 1 ? 15 HELX_P HELX_P4 4 ASP A 49 ? LYS A 60 ? ASP A 65 LYS A 76 1 ? 12 HELX_P HELX_P5 5 ASP A 68 ? ALA A 82 ? ASP A 84 ALA A 98 1 ? 15 HELX_P HELX_P6 6 SER A 84 ? VAL A 96 ? SER A 100 VAL A 112 1 ? 13 HELX_P HELX_P7 7 ASN A 97 ? GLY A 101 ? ASN A 113 GLY A 117 5 ? 5 HELX_P HELX_P8 8 ASP A 104 ? ALA A 116 ? ASP A 120 ALA A 132 1 ? 13 HELX_P HELX_P9 9 SER A 121 ? GLY A 138 ? SER A 137 GLY A 154 1 ? 18 HELX_P HELX_P10 10 ASP A 144 ? LEU A 158 ? ASP A 160 LEU A 174 1 ? 15 HELX_P HELX_P11 11 GLY A 162 ? GLY A 175 ? GLY A 178 GLY A 191 1 ? 14 HELX_P HELX_P12 12 ASN A 183 ? GLY A 198 ? ASN A 199 GLY A 214 1 ? 16 HELX_P HELX_P13 13 PHE A 199 ? LYS A 211 ? PHE A 215 LYS A 227 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 195 SG ? ? ? 1_555 A CYS 203 SG ? ? A CYS 211 A CYS 219 1_555 ? ? ? ? ? ? ? 2.098 ? ? covale1 covale both ? A GLN 128 C ? ? ? 1_555 A MSE 129 N ? ? A GLN 144 A MSE 145 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale2 covale both ? A MSE 129 C ? ? ? 1_555 A LEU 130 N ? ? A MSE 145 A LEU 146 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale3 covale both ? A GLY 169 C ? ? ? 1_555 A MSE 170 N ? ? A GLY 185 A MSE 186 1_555 ? ? ? ? ? ? ? 1.316 ? ? covale4 covale both ? A MSE 170 C ? ? ? 1_555 A MSE 171 N ? ? A MSE 186 A MSE 187 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale5 covale both ? A MSE 171 C ? ? ? 1_555 A PHE 172 N ? ? A MSE 187 A PHE 188 1_555 ? ? ? ? ? ? ? 1.332 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 229 ? 8 'BINDING SITE FOR RESIDUE EDO A 229' AC2 Software A EDO 230 ? 3 'BINDING SITE FOR RESIDUE EDO A 230' AC3 Software A EDO 231 ? 7 'BINDING SITE FOR RESIDUE EDO A 231' AC4 Software A EDO 232 ? 5 'BINDING SITE FOR RESIDUE EDO A 232' AC5 Software A EDO 233 ? 5 'BINDING SITE FOR RESIDUE EDO A 233' AC6 Software A EDO 234 ? 3 'BINDING SITE FOR RESIDUE EDO A 234' AC7 Software A EDO 235 ? 5 'BINDING SITE FOR RESIDUE EDO A 235' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 ARG A 18 ? ARG A 34 . ? 1_555 ? 2 AC1 8 ARG A 19 ? ARG A 35 . ? 1_555 ? 3 AC1 8 GLY A 48 ? GLY A 64 . ? 1_555 ? 4 AC1 8 ASP A 49 ? ASP A 65 . ? 1_555 ? 5 AC1 8 GLY A 50 ? GLY A 66 . ? 1_555 ? 6 AC1 8 ASP A 51 ? ASP A 67 . ? 1_555 ? 7 AC1 8 ALA A 82 ? ALA A 98 . ? 1_555 ? 8 AC1 8 HOH I . ? HOH A 339 . ? 1_555 ? 9 AC2 3 ARG A 98 ? ARG A 114 . ? 1_555 ? 10 AC2 3 GLY A 178 ? GLY A 194 . ? 1_555 ? 11 AC2 3 GLU A 181 ? GLU A 197 . ? 1_555 ? 12 AC3 7 GLN A 8 ? GLN A 24 . ? 1_555 ? 13 AC3 7 VAL A 80 ? VAL A 96 . ? 3_664 ? 14 AC3 7 GLY A 83 ? GLY A 99 . ? 3_664 ? 15 AC3 7 LYS A 85 ? LYS A 101 . ? 3_664 ? 16 AC3 7 GLU A 88 ? GLU A 104 . ? 3_664 ? 17 AC3 7 ASP A 114 ? ASP A 130 . ? 3_664 ? 18 AC3 7 ARG A 117 ? ARG A 133 . ? 3_664 ? 19 AC4 5 GLN A 8 ? GLN A 24 . ? 2_655 ? 20 AC4 5 TYR A 9 ? TYR A 25 . ? 2_655 ? 21 AC4 5 GLU A 81 ? GLU A 97 . ? 1_555 ? 22 AC4 5 LEU A 91 ? LEU A 107 . ? 1_555 ? 23 AC4 5 HOH I . ? HOH A 314 . ? 1_555 ? 24 AC5 5 GLN A 71 ? GLN A 87 . ? 1_555 ? 25 AC5 5 GLN A 74 ? GLN A 90 . ? 1_555 ? 26 AC5 5 LYS A 78 ? LYS A 94 . ? 1_555 ? 27 AC5 5 CYS A 195 ? CYS A 211 . ? 5_565 ? 28 AC5 5 HOH I . ? HOH A 406 . ? 5_565 ? 29 AC6 3 LYS A 36 ? LYS A 52 . ? 1_555 ? 30 AC6 3 HOH I . ? HOH A 389 . ? 1_555 ? 31 AC6 3 HOH I . ? HOH A 400 . ? 1_555 ? 32 AC7 5 TYR A 22 ? TYR A 38 . ? 1_555 ? 33 AC7 5 TYR A 23 ? TYR A 39 . ? 1_555 ? 34 AC7 5 SER A 86 ? SER A 102 . ? 1_555 ? 35 AC7 5 ASP A 104 ? ASP A 120 . ? 3_664 ? 36 AC7 5 HOH I . ? HOH A 306 . ? 3_664 ? # _atom_sites.entry_id 3RJV _atom_sites.fract_transf_matrix[1][1] 0.012269 _atom_sites.fract_transf_matrix[1][2] 0.007083 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014167 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011999 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 ALA 2 18 ? ? ? A . n A 1 3 THR 3 19 ? ? ? A . n A 1 4 GLU 4 20 20 GLU GLU A . n A 1 5 PRO 5 21 21 PRO PRO A . n A 1 6 GLY 6 22 22 GLY GLY A . n A 1 7 SER 7 23 23 SER SER A . n A 1 8 GLN 8 24 24 GLN GLN A . n A 1 9 TYR 9 25 25 TYR TYR A . n A 1 10 GLN 10 26 26 GLN GLN A . n A 1 11 GLN 11 27 27 GLN GLN A . n A 1 12 GLN 12 28 28 GLN GLN A . n A 1 13 ALA 13 29 29 ALA ALA A . n A 1 14 GLU 14 30 30 GLU GLU A . n A 1 15 ALA 15 31 31 ALA ALA A . n A 1 16 GLY 16 32 32 GLY GLY A . n A 1 17 ASP 17 33 33 ASP ASP A . n A 1 18 ARG 18 34 34 ARG ARG A . n A 1 19 ARG 19 35 35 ARG ARG A . n A 1 20 ALA 20 36 36 ALA ALA A . n A 1 21 GLN 21 37 37 GLN GLN A . n A 1 22 TYR 22 38 38 TYR TYR A . n A 1 23 TYR 23 39 39 TYR TYR A . n A 1 24 LEU 24 40 40 LEU LEU A . n A 1 25 ALA 25 41 41 ALA ALA A . n A 1 26 ASP 26 42 42 ASP ASP A . n A 1 27 THR 27 43 43 THR THR A . n A 1 28 TRP 28 44 44 TRP TRP A . n A 1 29 VAL 29 45 45 VAL VAL A . n A 1 30 SER 30 46 46 SER SER A . n A 1 31 SER 31 47 47 SER SER A . n A 1 32 GLY 32 48 48 GLY GLY A . n A 1 33 ASP 33 49 49 ASP ASP A . n A 1 34 TYR 34 50 50 TYR TYR A . n A 1 35 GLN 35 51 51 GLN GLN A . n A 1 36 LYS 36 52 52 LYS LYS A . n A 1 37 ALA 37 53 53 ALA ALA A . n A 1 38 GLU 38 54 54 GLU GLU A . n A 1 39 TYR 39 55 55 TYR TYR A . n A 1 40 TRP 40 56 56 TRP TRP A . n A 1 41 ALA 41 57 57 ALA ALA A . n A 1 42 GLN 42 58 58 GLN GLN A . n A 1 43 LYS 43 59 59 LYS LYS A . n A 1 44 ALA 44 60 60 ALA ALA A . n A 1 45 ALA 45 61 61 ALA ALA A . n A 1 46 ALA 46 62 62 ALA ALA A . n A 1 47 GLN 47 63 63 GLN GLN A . n A 1 48 GLY 48 64 64 GLY GLY A . n A 1 49 ASP 49 65 65 ASP ASP A . n A 1 50 GLY 50 66 66 GLY GLY A . n A 1 51 ASP 51 67 67 ASP ASP A . n A 1 52 ALA 52 68 68 ALA ALA A . n A 1 53 LEU 53 69 69 LEU LEU A . n A 1 54 ALA 54 70 70 ALA ALA A . n A 1 55 LEU 55 71 71 LEU LEU A . n A 1 56 LEU 56 72 72 LEU LEU A . n A 1 57 ALA 57 73 73 ALA ALA A . n A 1 58 GLN 58 74 74 GLN GLN A . n A 1 59 LEU 59 75 75 LEU LEU A . n A 1 60 LYS 60 76 76 LYS LYS A . n A 1 61 ILE 61 77 77 ILE ILE A . n A 1 62 ARG 62 78 78 ARG ARG A . n A 1 63 ASN 63 79 79 ASN ASN A . n A 1 64 PRO 64 80 80 PRO PRO A . n A 1 65 GLN 65 81 81 GLN GLN A . n A 1 66 GLN 66 82 82 GLN GLN A . n A 1 67 ALA 67 83 83 ALA ALA A . n A 1 68 ASP 68 84 84 ASP ASP A . n A 1 69 TYR 69 85 85 TYR TYR A . n A 1 70 PRO 70 86 86 PRO PRO A . n A 1 71 GLN 71 87 87 GLN GLN A . n A 1 72 ALA 72 88 88 ALA ALA A . n A 1 73 ARG 73 89 89 ARG ARG A . n A 1 74 GLN 74 90 90 GLN GLN A . n A 1 75 LEU 75 91 91 LEU LEU A . n A 1 76 ALA 76 92 92 ALA ALA A . n A 1 77 GLU 77 93 93 GLU GLU A . n A 1 78 LYS 78 94 94 LYS LYS A . n A 1 79 ALA 79 95 95 ALA ALA A . n A 1 80 VAL 80 96 96 VAL VAL A . n A 1 81 GLU 81 97 97 GLU GLU A . n A 1 82 ALA 82 98 98 ALA ALA A . n A 1 83 GLY 83 99 99 GLY GLY A . n A 1 84 SER 84 100 100 SER SER A . n A 1 85 LYS 85 101 101 LYS LYS A . n A 1 86 SER 86 102 102 SER SER A . n A 1 87 GLY 87 103 103 GLY GLY A . n A 1 88 GLU 88 104 104 GLU GLU A . n A 1 89 ILE 89 105 105 ILE ILE A . n A 1 90 VAL 90 106 106 VAL VAL A . n A 1 91 LEU 91 107 107 LEU LEU A . n A 1 92 ALA 92 108 108 ALA ALA A . n A 1 93 ARG 93 109 109 ARG ARG A . n A 1 94 VAL 94 110 110 VAL VAL A . n A 1 95 LEU 95 111 111 LEU LEU A . n A 1 96 VAL 96 112 112 VAL VAL A . n A 1 97 ASN 97 113 113 ASN ASN A . n A 1 98 ARG 98 114 114 ARG ARG A . n A 1 99 GLN 99 115 115 GLN GLN A . n A 1 100 ALA 100 116 116 ALA ALA A . n A 1 101 GLY 101 117 117 GLY GLY A . n A 1 102 ALA 102 118 118 ALA ALA A . n A 1 103 THR 103 119 119 THR THR A . n A 1 104 ASP 104 120 120 ASP ASP A . n A 1 105 VAL 105 121 121 VAL VAL A . n A 1 106 ALA 106 122 122 ALA ALA A . n A 1 107 HIS 107 123 123 HIS HIS A . n A 1 108 ALA 108 124 124 ALA ALA A . n A 1 109 ILE 109 125 125 ILE ILE A . n A 1 110 THR 110 126 126 THR THR A . n A 1 111 LEU 111 127 127 LEU LEU A . n A 1 112 LEU 112 128 128 LEU LEU A . n A 1 113 GLN 113 129 129 GLN GLN A . n A 1 114 ASP 114 130 130 ASP ASP A . n A 1 115 ALA 115 131 131 ALA ALA A . n A 1 116 ALA 116 132 132 ALA ALA A . n A 1 117 ARG 117 133 133 ARG ARG A . n A 1 118 ASP 118 134 134 ASP ASP A . n A 1 119 SER 119 135 135 SER SER A . n A 1 120 GLU 120 136 136 GLU GLU A . n A 1 121 SER 121 137 137 SER SER A . n A 1 122 ASP 122 138 138 ASP ASP A . n A 1 123 ALA 123 139 139 ALA ALA A . n A 1 124 ALA 124 140 140 ALA ALA A . n A 1 125 VAL 125 141 141 VAL VAL A . n A 1 126 ASP 126 142 142 ASP ASP A . n A 1 127 ALA 127 143 143 ALA ALA A . n A 1 128 GLN 128 144 144 GLN GLN A . n A 1 129 MSE 129 145 145 MSE MSE A . n A 1 130 LEU 130 146 146 LEU LEU A . n A 1 131 LEU 131 147 147 LEU LEU A . n A 1 132 GLY 132 148 148 GLY GLY A . n A 1 133 LEU 133 149 149 LEU LEU A . n A 1 134 ILE 134 150 150 ILE ILE A . n A 1 135 TYR 135 151 151 TYR TYR A . n A 1 136 ALA 136 152 152 ALA ALA A . n A 1 137 SER 137 153 153 SER SER A . n A 1 138 GLY 138 154 154 GLY GLY A . n A 1 139 VAL 139 155 155 VAL VAL A . n A 1 140 HIS 140 156 156 HIS HIS A . n A 1 141 GLY 141 157 157 GLY GLY A . n A 1 142 PRO 142 158 158 PRO PRO A . n A 1 143 GLU 143 159 159 GLU GLU A . n A 1 144 ASP 144 160 160 ASP ASP A . n A 1 145 ASP 145 161 161 ASP ASP A . n A 1 146 VAL 146 162 162 VAL VAL A . n A 1 147 LYS 147 163 163 LYS LYS A . n A 1 148 ALA 148 164 164 ALA ALA A . n A 1 149 SER 149 165 165 SER SER A . n A 1 150 GLU 150 166 166 GLU GLU A . n A 1 151 TYR 151 167 167 TYR TYR A . n A 1 152 PHE 152 168 168 PHE PHE A . n A 1 153 LYS 153 169 169 LYS LYS A . n A 1 154 GLY 154 170 170 GLY GLY A . n A 1 155 SER 155 171 171 SER SER A . n A 1 156 SER 156 172 172 SER SER A . n A 1 157 SER 157 173 173 SER SER A . n A 1 158 LEU 158 174 174 LEU LEU A . n A 1 159 SER 159 175 175 SER SER A . n A 1 160 ARG 160 176 176 ARG ARG A . n A 1 161 THR 161 177 177 THR THR A . n A 1 162 GLY 162 178 178 GLY GLY A . n A 1 163 TYR 163 179 179 TYR TYR A . n A 1 164 ALA 164 180 180 ALA ALA A . n A 1 165 GLU 165 181 181 GLU GLU A . n A 1 166 TYR 166 182 182 TYR TYR A . n A 1 167 TRP 167 183 183 TRP TRP A . n A 1 168 ALA 168 184 184 ALA ALA A . n A 1 169 GLY 169 185 185 GLY GLY A . n A 1 170 MSE 170 186 186 MSE MSE A . n A 1 171 MSE 171 187 187 MSE MSE A . n A 1 172 PHE 172 188 188 PHE PHE A . n A 1 173 GLN 173 189 189 GLN GLN A . n A 1 174 GLN 174 190 190 GLN GLN A . n A 1 175 GLY 175 191 191 GLY GLY A . n A 1 176 GLU 176 192 192 GLU GLU A . n A 1 177 LYS 177 193 193 LYS LYS A . n A 1 178 GLY 178 194 194 GLY GLY A . n A 1 179 PHE 179 195 195 PHE PHE A . n A 1 180 ILE 180 196 196 ILE ILE A . n A 1 181 GLU 181 197 197 GLU GLU A . n A 1 182 PRO 182 198 198 PRO PRO A . n A 1 183 ASN 183 199 199 ASN ASN A . n A 1 184 LYS 184 200 200 LYS LYS A . n A 1 185 GLN 185 201 201 GLN GLN A . n A 1 186 LYS 186 202 202 LYS LYS A . n A 1 187 ALA 187 203 203 ALA ALA A . n A 1 188 LEU 188 204 204 LEU LEU A . n A 1 189 HIS 189 205 205 HIS HIS A . n A 1 190 TRP 190 206 206 TRP TRP A . n A 1 191 LEU 191 207 207 LEU LEU A . n A 1 192 ASN 192 208 208 ASN ASN A . n A 1 193 VAL 193 209 209 VAL VAL A . n A 1 194 SER 194 210 210 SER SER A . n A 1 195 CYS 195 211 211 CYS CYS A . n A 1 196 LEU 196 212 212 LEU LEU A . n A 1 197 GLU 197 213 213 GLU GLU A . n A 1 198 GLY 198 214 214 GLY GLY A . n A 1 199 PHE 199 215 215 PHE PHE A . n A 1 200 ASP 200 216 216 ASP ASP A . n A 1 201 THR 201 217 217 THR THR A . n A 1 202 GLY 202 218 218 GLY GLY A . n A 1 203 CYS 203 219 219 CYS CYS A . n A 1 204 GLU 204 220 220 GLU GLU A . n A 1 205 GLU 205 221 221 GLU GLU A . n A 1 206 PHE 206 222 222 PHE PHE A . n A 1 207 ASP 207 223 223 ASP ASP A . n A 1 208 ARG 208 224 224 ARG ARG A . n A 1 209 ILE 209 225 225 ILE ILE A . n A 1 210 SER 210 226 226 SER SER A . n A 1 211 LYS 211 227 227 LYS LYS A . n A 1 212 GLY 212 228 ? ? ? A . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 229 229 EDO EDO A . C 2 EDO 1 230 230 EDO EDO A . D 2 EDO 1 231 231 EDO EDO A . E 2 EDO 1 232 232 EDO EDO A . F 2 EDO 1 233 233 EDO EDO A . G 2 EDO 1 234 234 EDO EDO A . H 2 EDO 1 235 235 EDO EDO A . I 3 HOH 1 236 236 HOH HOH A . I 3 HOH 2 237 237 HOH HOH A . I 3 HOH 3 238 238 HOH HOH A . I 3 HOH 4 239 239 HOH HOH A . I 3 HOH 5 240 240 HOH HOH A . I 3 HOH 6 241 241 HOH HOH A . I 3 HOH 7 242 242 HOH HOH A . I 3 HOH 8 243 243 HOH HOH A . I 3 HOH 9 244 244 HOH HOH A . I 3 HOH 10 245 245 HOH HOH A . I 3 HOH 11 246 246 HOH HOH A . I 3 HOH 12 247 247 HOH HOH A . I 3 HOH 13 248 248 HOH HOH A . I 3 HOH 14 249 249 HOH HOH A . I 3 HOH 15 250 250 HOH HOH A . I 3 HOH 16 251 251 HOH HOH A . I 3 HOH 17 252 252 HOH HOH A . I 3 HOH 18 253 253 HOH HOH A . I 3 HOH 19 254 254 HOH HOH A . I 3 HOH 20 255 255 HOH HOH A . I 3 HOH 21 256 256 HOH HOH A . I 3 HOH 22 257 257 HOH HOH A . I 3 HOH 23 258 258 HOH HOH A . I 3 HOH 24 259 259 HOH HOH A . I 3 HOH 25 260 260 HOH HOH A . I 3 HOH 26 261 261 HOH HOH A . I 3 HOH 27 262 262 HOH HOH A . I 3 HOH 28 263 263 HOH HOH A . I 3 HOH 29 264 264 HOH HOH A . I 3 HOH 30 265 265 HOH HOH A . I 3 HOH 31 266 266 HOH HOH A . I 3 HOH 32 267 267 HOH HOH A . I 3 HOH 33 268 268 HOH HOH A . I 3 HOH 34 269 269 HOH HOH A . I 3 HOH 35 270 270 HOH HOH A . I 3 HOH 36 271 271 HOH HOH A . I 3 HOH 37 272 272 HOH HOH A . I 3 HOH 38 273 273 HOH HOH A . I 3 HOH 39 274 274 HOH HOH A . I 3 HOH 40 275 275 HOH HOH A . I 3 HOH 41 276 276 HOH HOH A . I 3 HOH 42 277 277 HOH HOH A . I 3 HOH 43 278 278 HOH HOH A . I 3 HOH 44 279 279 HOH HOH A . I 3 HOH 45 280 280 HOH HOH A . I 3 HOH 46 281 281 HOH HOH A . I 3 HOH 47 282 282 HOH HOH A . I 3 HOH 48 283 283 HOH HOH A . I 3 HOH 49 284 284 HOH HOH A . I 3 HOH 50 285 285 HOH HOH A . I 3 HOH 51 286 286 HOH HOH A . I 3 HOH 52 287 287 HOH HOH A . I 3 HOH 53 288 288 HOH HOH A . I 3 HOH 54 289 289 HOH HOH A . I 3 HOH 55 290 290 HOH HOH A . I 3 HOH 56 291 291 HOH HOH A . I 3 HOH 57 292 292 HOH HOH A . I 3 HOH 58 293 293 HOH HOH A . I 3 HOH 59 294 294 HOH HOH A . I 3 HOH 60 295 295 HOH HOH A . I 3 HOH 61 296 296 HOH HOH A . I 3 HOH 62 297 297 HOH HOH A . I 3 HOH 63 298 298 HOH HOH A . I 3 HOH 64 299 299 HOH HOH A . I 3 HOH 65 300 300 HOH HOH A . I 3 HOH 66 301 301 HOH HOH A . I 3 HOH 67 302 302 HOH HOH A . I 3 HOH 68 303 303 HOH HOH A . I 3 HOH 69 304 304 HOH HOH A . I 3 HOH 70 305 305 HOH HOH A . I 3 HOH 71 306 306 HOH HOH A . I 3 HOH 72 307 307 HOH HOH A . I 3 HOH 73 308 308 HOH HOH A . I 3 HOH 74 309 309 HOH HOH A . I 3 HOH 75 310 310 HOH HOH A . I 3 HOH 76 311 311 HOH HOH A . I 3 HOH 77 312 312 HOH HOH A . I 3 HOH 78 313 313 HOH HOH A . I 3 HOH 79 314 314 HOH HOH A . I 3 HOH 80 315 315 HOH HOH A . I 3 HOH 81 316 316 HOH HOH A . I 3 HOH 82 317 317 HOH HOH A . I 3 HOH 83 318 318 HOH HOH A . I 3 HOH 84 319 319 HOH HOH A . I 3 HOH 85 320 320 HOH HOH A . I 3 HOH 86 321 321 HOH HOH A . I 3 HOH 87 322 322 HOH HOH A . I 3 HOH 88 323 323 HOH HOH A . I 3 HOH 89 324 324 HOH HOH A . I 3 HOH 90 325 325 HOH HOH A . I 3 HOH 91 326 326 HOH HOH A . I 3 HOH 92 327 327 HOH HOH A . I 3 HOH 93 328 328 HOH HOH A . I 3 HOH 94 329 329 HOH HOH A . I 3 HOH 95 330 330 HOH HOH A . I 3 HOH 96 331 331 HOH HOH A . I 3 HOH 97 332 332 HOH HOH A . I 3 HOH 98 333 333 HOH HOH A . I 3 HOH 99 334 334 HOH HOH A . I 3 HOH 100 335 335 HOH HOH A . I 3 HOH 101 336 336 HOH HOH A . I 3 HOH 102 337 337 HOH HOH A . I 3 HOH 103 338 338 HOH HOH A . I 3 HOH 104 339 339 HOH HOH A . I 3 HOH 105 340 340 HOH HOH A . I 3 HOH 106 341 341 HOH HOH A . I 3 HOH 107 342 342 HOH HOH A . I 3 HOH 108 343 343 HOH HOH A . I 3 HOH 109 344 344 HOH HOH A . I 3 HOH 110 345 345 HOH HOH A . I 3 HOH 111 346 346 HOH HOH A . I 3 HOH 112 347 347 HOH HOH A . I 3 HOH 113 348 348 HOH HOH A . I 3 HOH 114 349 349 HOH HOH A . I 3 HOH 115 350 350 HOH HOH A . I 3 HOH 116 351 351 HOH HOH A . I 3 HOH 117 352 352 HOH HOH A . I 3 HOH 118 353 353 HOH HOH A . I 3 HOH 119 354 354 HOH HOH A . I 3 HOH 120 355 355 HOH HOH A . I 3 HOH 121 356 356 HOH HOH A . I 3 HOH 122 357 357 HOH HOH A . I 3 HOH 123 358 358 HOH HOH A . I 3 HOH 124 359 359 HOH HOH A . I 3 HOH 125 360 360 HOH HOH A . I 3 HOH 126 361 361 HOH HOH A . I 3 HOH 127 362 362 HOH HOH A . I 3 HOH 128 363 363 HOH HOH A . I 3 HOH 129 364 364 HOH HOH A . I 3 HOH 130 365 365 HOH HOH A . I 3 HOH 131 366 366 HOH HOH A . I 3 HOH 132 367 367 HOH HOH A . I 3 HOH 133 368 368 HOH HOH A . I 3 HOH 134 369 369 HOH HOH A . I 3 HOH 135 370 370 HOH HOH A . I 3 HOH 136 371 371 HOH HOH A . I 3 HOH 137 372 372 HOH HOH A . I 3 HOH 138 373 373 HOH HOH A . I 3 HOH 139 374 374 HOH HOH A . I 3 HOH 140 375 375 HOH HOH A . I 3 HOH 141 376 376 HOH HOH A . I 3 HOH 142 377 377 HOH HOH A . I 3 HOH 143 378 378 HOH HOH A . I 3 HOH 144 379 379 HOH HOH A . I 3 HOH 145 380 380 HOH HOH A . I 3 HOH 146 381 381 HOH HOH A . I 3 HOH 147 382 382 HOH HOH A . I 3 HOH 148 383 383 HOH HOH A . I 3 HOH 149 384 384 HOH HOH A . I 3 HOH 150 385 385 HOH HOH A . I 3 HOH 151 386 386 HOH HOH A . I 3 HOH 152 387 387 HOH HOH A . I 3 HOH 153 388 388 HOH HOH A . I 3 HOH 154 389 389 HOH HOH A . I 3 HOH 155 390 390 HOH HOH A . I 3 HOH 156 391 391 HOH HOH A . I 3 HOH 157 392 392 HOH HOH A . I 3 HOH 158 393 393 HOH HOH A . I 3 HOH 159 394 394 HOH HOH A . I 3 HOH 160 395 395 HOH HOH A . I 3 HOH 161 396 396 HOH HOH A . I 3 HOH 162 397 397 HOH HOH A . I 3 HOH 163 398 398 HOH HOH A . I 3 HOH 164 399 399 HOH HOH A . I 3 HOH 165 400 400 HOH HOH A . I 3 HOH 166 401 401 HOH HOH A . I 3 HOH 167 402 402 HOH HOH A . I 3 HOH 168 403 403 HOH HOH A . I 3 HOH 169 404 404 HOH HOH A . I 3 HOH 170 405 405 HOH HOH A . I 3 HOH 171 406 406 HOH HOH A . I 3 HOH 172 407 407 HOH HOH A . I 3 HOH 173 408 408 HOH HOH A . I 3 HOH 174 409 409 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 129 A MSE 145 ? MET SELENOMETHIONINE 2 A MSE 170 A MSE 186 ? MET SELENOMETHIONINE 3 A MSE 171 A MSE 187 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-05-04 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 4 'Structure model' 1 3 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' database_2 3 4 'Structure model' struct_conn 4 4 'Structure model' struct_ref_seq_dif 5 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_database_2.pdbx_DOI' 4 4 'Structure model' '_database_2.pdbx_database_accession' 5 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 4 'Structure model' '_struct_ref_seq_dif.details' 7 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 41.2225 _pdbx_refine_tls.origin_y 33.7420 _pdbx_refine_tls.origin_z 28.4757 _pdbx_refine_tls.T[1][1] 0.0102 _pdbx_refine_tls.T[2][2] 0.0337 _pdbx_refine_tls.T[3][3] 0.0095 _pdbx_refine_tls.T[1][2] 0.0052 _pdbx_refine_tls.T[1][3] 0.0025 _pdbx_refine_tls.T[2][3] 0.0125 _pdbx_refine_tls.L[1][1] 1.6866 _pdbx_refine_tls.L[2][2] 0.3796 _pdbx_refine_tls.L[3][3] 0.7334 _pdbx_refine_tls.L[1][2] 0.2701 _pdbx_refine_tls.L[1][3] 0.5278 _pdbx_refine_tls.L[2][3] 0.1929 _pdbx_refine_tls.S[1][1] -0.0427 _pdbx_refine_tls.S[2][2] 0.0305 _pdbx_refine_tls.S[3][3] 0.0122 _pdbx_refine_tls.S[1][2] 0.0830 _pdbx_refine_tls.S[1][3] 0.1004 _pdbx_refine_tls.S[2][3] 0.0284 _pdbx_refine_tls.S[2][1] -0.0027 _pdbx_refine_tls.S[3][1] -0.0705 _pdbx_refine_tls.S[3][2] 0.0461 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 20 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 227 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 4 SHARP . ? package 'Eric de La Fortelle' sharp-develop@globalphasing.com phasing http://www.globalphasing.com/sharp/ ? ? 5 SCALA 3.3.15 ? package 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' ? ? ? 6 REFMAC 5.5.0110 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 7 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? # _pdbx_entry_details.entry_id 3RJV _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT (RESIDUES 18-228) WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 34 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 34 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 34 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.48 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 3.18 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 175 ? ? -133.97 -96.86 2 1 PHE A 195 ? ? -131.86 -66.02 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 94 ? CD ? A LYS 78 CD 2 1 Y 1 A LYS 94 ? CE ? A LYS 78 CE 3 1 Y 1 A LYS 94 ? NZ ? A LYS 78 NZ 4 1 Y 1 A LYS 227 ? CG ? A LYS 211 CG 5 1 Y 1 A LYS 227 ? CD ? A LYS 211 CD 6 1 Y 1 A LYS 227 ? CE ? A LYS 211 CE 7 1 Y 1 A LYS 227 ? NZ ? A LYS 211 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A ALA 18 ? A ALA 2 3 1 Y 1 A THR 19 ? A THR 3 4 1 Y 1 A GLY 228 ? A GLY 212 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 water HOH #