HEADER LIGASE 18-APR-11 3RKW TITLE STRUCTURAL CHARACTERISATION OF STAPHYLOCOCCUS AUREUS BIOTIN PROTEIN TITLE 2 LIGASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIOTIN-[ACETYL-COA-CARBOXYLASE] LIGASE; COMPND 3 CHAIN: A; COMPND 4 EC: 6.3.4.15; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 889933; SOURCE 4 STRAIN: ECT-R 2; SOURCE 5 GENE: ECTR2_1310; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BIOTIN PROTEIN LIGASE BIOTINOL, 3 DOMAINS, BIOTIN EZYME, DNA AND KEYWDS 2 BIOTIN CARRIER COUPLING DOMAINS, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR M.C.J.WILCE,N.R.PENDINI,M.Y.YAP REVDAT 2 01-NOV-23 3RKW 1 REMARK SEQADV REVDAT 1 18-APR-12 3RKW 0 JRNL AUTH N.R.PENDINI,M.Y.YAP,S.W.POLYAK,N.COWIESON,D.A.K.TRAORE, JRNL AUTH 2 G.W.BOOKER,J.C.WALLACE,A.ABELL,J.A.WILCE,M.C.J.WILCE JRNL TITL STRUCTURAL CHARACTERISATION OF STAPHYLOCOCCUS AUREUS BIOTIN JRNL TITL 2 PROTEIN LIGASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.55 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 20751 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 1065 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.5581 - 4.9973 0.95 2572 134 0.2115 0.2351 REMARK 3 2 4.9973 - 3.9677 0.97 2470 123 0.1694 0.1993 REMARK 3 3 3.9677 - 3.4665 0.98 2466 140 0.2229 0.2807 REMARK 3 4 3.4665 - 3.1497 0.98 2426 129 0.1947 0.2603 REMARK 3 5 3.1497 - 2.9240 0.99 2433 154 0.2022 0.2609 REMARK 3 6 2.9240 - 2.7516 0.99 2465 117 0.2207 0.2879 REMARK 3 7 2.7516 - 2.6139 0.99 2437 132 0.2720 0.3345 REMARK 3 8 2.6139 - 2.5001 0.99 2417 136 0.3586 0.4777 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 1.01 REMARK 3 K_SOL : 0.43 REMARK 3 B_SOL : 38.26 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.440 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.640 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.66230 REMARK 3 B22 (A**2) : 1.66230 REMARK 3 B33 (A**2) : -3.32450 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.022 2704 REMARK 3 ANGLE : 2.030 3651 REMARK 3 CHIRALITY : 0.114 398 REMARK 3 PLANARITY : 0.008 467 REMARK 3 DIHEDRAL : 20.746 1047 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: RESSEQ 2:66 REMARK 3 ORIGIN FOR THE GROUP (A): 25.6280 24.5247 45.9496 REMARK 3 T TENSOR REMARK 3 T11: 0.1337 T22: 0.1095 REMARK 3 T33: 0.1923 T12: 0.1029 REMARK 3 T13: 0.0818 T23: 0.0694 REMARK 3 L TENSOR REMARK 3 L11: 0.0920 L22: 0.0505 REMARK 3 L33: 0.1488 L12: -0.0123 REMARK 3 L13: 0.0521 L23: 0.0329 REMARK 3 S TENSOR REMARK 3 S11: 0.0289 S12: -0.1019 S13: 0.0119 REMARK 3 S21: -0.0636 S22: -0.0619 S23: 0.0048 REMARK 3 S31: -0.0890 S32: -0.0753 S33: -0.0216 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: RESSEQ 67:261 REMARK 3 ORIGIN FOR THE GROUP (A): 41.3152 17.4335 22.0131 REMARK 3 T TENSOR REMARK 3 T11: 0.0501 T22: 0.0874 REMARK 3 T33: 0.0837 T12: 0.0164 REMARK 3 T13: 0.0699 T23: 0.0453 REMARK 3 L TENSOR REMARK 3 L11: 0.6869 L22: 0.5563 REMARK 3 L33: 0.8218 L12: 0.1687 REMARK 3 L13: -0.3774 L23: -0.0710 REMARK 3 S TENSOR REMARK 3 S11: 0.0477 S12: 0.1009 S13: -0.0187 REMARK 3 S21: 0.0938 S22: 0.0990 S23: 0.1009 REMARK 3 S31: -0.1677 S32: -0.1212 S33: -0.0551 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: RESSEQ 264:322 REMARK 3 ORIGIN FOR THE GROUP (A): 50.4780 17.8851 0.9844 REMARK 3 T TENSOR REMARK 3 T11: 0.2010 T22: 0.3022 REMARK 3 T33: 0.0431 T12: -0.0595 REMARK 3 T13: 0.0490 T23: 0.0815 REMARK 3 L TENSOR REMARK 3 L11: 0.9069 L22: 0.9537 REMARK 3 L33: 0.2244 L12: -0.0035 REMARK 3 L13: -0.3772 L23: 0.1655 REMARK 3 S TENSOR REMARK 3 S11: 0.0919 S12: 0.2976 S13: 0.1827 REMARK 3 S21: -0.4544 S22: 0.1390 S23: 0.0554 REMARK 3 S31: -0.2850 S32: -0.1233 S33: -0.2113 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3RKW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-APR-11. REMARK 100 THE DEPOSITION ID IS D_1000065058. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20973 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 3RIR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 47.29900 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 47.29900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 65.31300 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 47.29900 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 47.29900 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 65.31300 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 47.29900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 47.29900 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 65.31300 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 47.29900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 47.29900 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 65.31300 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 94.59800 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 270 O HOH A 368 1.84 REMARK 500 OG1 THR A 285 O HOH A 343 1.85 REMARK 500 O HOH A 339 O HOH A 357 2.09 REMARK 500 OD2 ASP A 322 O HOH A 358 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 189 CB CYS A 189 SG -0.127 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 120 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG A 125 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG A 125 NE - CZ - NH2 ANGL. DEV. = -7.8 DEGREES REMARK 500 ARG A 142 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 142 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 CYS A 189 CA - CB - SG ANGL. DEV. = 8.3 DEGREES REMARK 500 ARG A 255 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 55 -8.52 79.32 REMARK 500 LYS A 56 -51.94 -121.27 REMARK 500 ASP A 65 54.66 -95.66 REMARK 500 SER A 93 127.69 -172.60 REMARK 500 LYS A 118 48.82 -144.88 REMARK 500 ASN A 179 11.29 -142.61 REMARK 500 ASP A 184 -123.44 52.16 REMARK 500 LYS A 236 -84.91 -58.62 REMARK 500 ASN A 237 159.48 -45.53 REMARK 500 ASP A 288 -66.05 145.56 REMARK 500 ASP A 308 -178.78 -41.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 BT5 A 500 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BT5 A 500 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3RIR RELATED DB: PDB REMARK 900 RELATED ID: 3RKX RELATED DB: PDB REMARK 900 RELATED ID: 3RKY RELATED DB: PDB DBREF 3RKW A 1 323 UNP E5R5T0 E5R5T0_STAAG 1 323 SEQADV 3RKW ASN A 272 UNP E5R5T0 ILE 272 CONFLICT SEQRES 1 A 323 MET SER LYS TYR SER GLN ASP VAL LEU GLN LEU LEU TYR SEQRES 2 A 323 LYS ASN LYS PRO ASN TYR ILE SER GLY GLN SER ILE ALA SEQRES 3 A 323 GLU SER LEU ASN ILE SER ARG THR ALA VAL LYS LYS VAL SEQRES 4 A 323 ILE ASP GLN LEU LYS LEU GLU GLY CYS LYS ILE ASP SER SEQRES 5 A 323 VAL ASN HIS LYS GLY HIS LEU LEU GLN GLN LEU PRO ASP SEQRES 6 A 323 ILE TRP TYR GLN GLY ILE ILE ASP GLN TYR THR LYS SER SEQRES 7 A 323 SER ALA LEU PHE ASP PHE SER GLU VAL TYR ASP SER ILE SEQRES 8 A 323 ASP SER THR GLN LEU ALA ALA LYS LYS SER LEU VAL GLY SEQRES 9 A 323 ASN GLN SER SER PHE PHE ILE LEU SER ASP GLU GLN THR SEQRES 10 A 323 LYS GLY ARG GLY ARG PHE ASN ARG HIS TRP SER SER SER SEQRES 11 A 323 LYS GLY GLN GLY LEU TRP MET SER VAL VAL LEU ARG PRO SEQRES 12 A 323 ASN VAL ALA PHE SER MET ILE SER LYS PHE ASN LEU PHE SEQRES 13 A 323 ILE ALA LEU GLY ILE ARG ASP ALA ILE GLN HIS PHE SER SEQRES 14 A 323 GLN ASP GLU VAL LYS VAL LYS TRP PRO ASN ASP ILE TYR SEQRES 15 A 323 ILE ASP ASN GLY LYS VAL CYS GLY PHE LEU THR GLU MET SEQRES 16 A 323 VAL ALA ASN ASN ASP GLY ILE GLU ALA ILE ILE CYS GLY SEQRES 17 A 323 ILE GLY ILE ASN LEU THR GLN GLN LEU GLU ASN PHE ASP SEQRES 18 A 323 GLU SER ILE ARG HIS ARG ALA THR SER ILE GLN LEU HIS SEQRES 19 A 323 ASP LYS ASN LYS LEU ASP ARG TYR GLN PHE LEU GLU ARG SEQRES 20 A 323 LEU LEU GLN GLU ILE GLU LYS ARG TYR ASN GLN PHE LEU SEQRES 21 A 323 THR LEU PRO PHE SER GLU ILE ARG GLU GLU TYR ASN ALA SEQRES 22 A 323 ALA SER ASN ILE TRP ASN ARG THR LEU LEU PHE THR GLU SEQRES 23 A 323 ASN ASP LYS GLN PHE LYS GLY GLN ALA ILE ASP LEU ASP SEQRES 24 A 323 TYR ASP GLY TYR LEU ILE VAL ARG ASP GLU ALA GLY GLU SEQRES 25 A 323 SER HIS ARG LEU ILE SER ALA ASP ILE ASP PHE HET BT5 A 500 37 HETNAM BT5 BIOTINYL-5-AMP FORMUL 2 BT5 C20 H28 N7 O9 P S FORMUL 3 HOH *97(H2 O) HELIX 1 1 TYR A 4 ASN A 15 1 12 HELIX 2 2 SER A 21 ASN A 30 1 10 HELIX 3 3 SER A 32 GLU A 46 1 15 HELIX 4 4 TYR A 68 SER A 79 1 12 HELIX 5 5 SER A 93 LEU A 102 1 10 HELIX 6 6 GLY A 121 ARG A 125 5 5 HELIX 7 7 ALA A 146 SER A 148 5 3 HELIX 8 8 MET A 149 HIS A 167 1 19 HELIX 9 9 GLN A 216 PHE A 220 5 5 HELIX 10 10 ASP A 221 HIS A 226 1 6 HELIX 11 11 SER A 230 ASP A 235 5 6 HELIX 12 12 ASP A 240 LEU A 262 1 23 HELIX 13 13 PHE A 264 ALA A 274 1 11 SHEET 1 A 2 LYS A 49 VAL A 53 0 SHEET 2 A 2 GLY A 57 GLN A 62 -1 O GLN A 61 N LYS A 49 SHEET 1 B 7 PHE A 84 ILE A 91 0 SHEET 2 B 7 PHE A 109 GLN A 116 1 O LEU A 112 N GLU A 86 SHEET 3 B 7 GLY A 134 LEU A 141 -1 O VAL A 140 N PHE A 109 SHEET 4 B 7 GLY A 201 ASN A 212 -1 O CYS A 207 N VAL A 139 SHEET 5 B 7 GLY A 186 ASN A 198 -1 N VAL A 188 O ASN A 212 SHEET 6 B 7 ASP A 180 ILE A 183 -1 N ILE A 181 O VAL A 188 SHEET 7 B 7 VAL A 173 LYS A 176 -1 N LYS A 174 O TYR A 182 SHEET 1 C 5 SER A 313 LEU A 316 0 SHEET 2 C 5 LEU A 304 ASP A 308 -1 N LEU A 304 O LEU A 316 SHEET 3 C 5 LYS A 289 LEU A 298 -1 N ASP A 297 O ILE A 305 SHEET 4 C 5 THR A 281 GLU A 286 -1 N PHE A 284 O PHE A 291 SHEET 5 C 5 ASP A 320 ASP A 322 -1 O ASP A 322 N LEU A 283 CISPEP 1 LYS A 16 PRO A 17 0 -4.16 CISPEP 2 TRP A 177 PRO A 178 0 0.62 SITE 1 AC1 24 SER A 93 THR A 94 GLN A 95 GLN A 116 SITE 2 AC1 24 GLY A 119 ARG A 120 GLY A 121 ARG A 122 SITE 3 AC1 24 ARG A 125 HIS A 126 TRP A 127 SER A 128 SITE 4 AC1 24 MET A 137 ASP A 180 LYS A 187 GLY A 190 SITE 5 AC1 24 PHE A 191 ILE A 209 GLY A 210 ASN A 212 SITE 6 AC1 24 ARG A 227 HOH A 325 HOH A 332 HOH A 385 CRYST1 94.598 94.598 130.626 90.00 90.00 90.00 P 42 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010571 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010571 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007655 0.00000