HEADER PROTEIN BINDING 22-APR-11 3RNO TITLE CRYSTAL STRUCTURE OF MOUSE APOLIPOPROTEIN A-I BINDING PROTEIN IN TITLE 2 COMPLEX WITH NADP. COMPND MOL_ID: 1; COMPND 2 MOLECULE: APOLIPOPROTEIN A-I-BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AI-BP; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: AIBP, APOA1BP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21A KEYWDS ROSSMANN FOLD, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR I.A.SHUMILIN,K.N.JHA,M.CYMBOROWSKI,J.C.HERR,W.MINOR REVDAT 6 06-NOV-24 3RNO 1 REMARK REVDAT 5 06-DEC-23 3RNO 1 REMARK REVDAT 4 13-SEP-23 3RNO 1 REMARK REVDAT 3 13-APR-22 3RNO 1 AUTHOR JRNL REMARK SEQADV REVDAT 3 2 1 LINK REVDAT 2 31-OCT-12 3RNO 1 JRNL REVDAT 1 09-MAY-12 3RNO 0 JRNL AUTH I.A.SHUMILIN,M.CYMBOROWSKI,O.CHERTIHIN,K.N.JHA,J.C.HERR, JRNL AUTH 2 S.A.LESLEY,A.JOACHIMIAK,W.MINOR JRNL TITL IDENTIFICATION OF UNKNOWN PROTEIN FUNCTION USING METABOLITE JRNL TITL 2 COCKTAIL SCREENING. JRNL REF STRUCTURE V. 20 1715 2012 JRNL REFN ISSN 0969-2126 JRNL PMID 22940582 JRNL DOI 10.1016/J.STR.2012.07.016 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.63 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 11447 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 542 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 695 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.60 REMARK 3 BIN R VALUE (WORKING SET) : 0.2770 REMARK 3 BIN FREE R VALUE SET COUNT : 36 REMARK 3 BIN FREE R VALUE : 0.3140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1808 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 10 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 53.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.26000 REMARK 3 B22 (A**2) : -0.26000 REMARK 3 B33 (A**2) : 0.38000 REMARK 3 B12 (A**2) : -0.13000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.232 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.169 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 17.010 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1902 ; 0.020 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1286 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2599 ; 1.805 ; 2.021 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3167 ; 0.962 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 232 ; 6.178 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 75 ;36.814 ;24.667 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 301 ;18.141 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;15.795 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 286 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2059 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 349 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1169 ; 0.770 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 460 ; 0.160 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1900 ; 1.489 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 733 ; 2.738 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 699 ; 3.994 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 26 A 49 REMARK 3 ORIGIN FOR THE GROUP (A): 13.1950 28.2610 20.2120 REMARK 3 T TENSOR REMARK 3 T11: 0.6230 T22: 0.1966 REMARK 3 T33: 0.1605 T12: 0.0045 REMARK 3 T13: 0.2004 T23: 0.0443 REMARK 3 L TENSOR REMARK 3 L11: 10.8119 L22: 18.4056 REMARK 3 L33: 12.4128 L12: 12.3978 REMARK 3 L13: 8.2239 L23: 9.5865 REMARK 3 S TENSOR REMARK 3 S11: -0.7332 S12: 0.7533 S13: -0.4979 REMARK 3 S21: -1.6528 S22: 0.9524 S23: -1.1877 REMARK 3 S31: 0.3305 S32: 0.7031 S33: -0.2192 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 50 A 158 REMARK 3 ORIGIN FOR THE GROUP (A): 7.8280 21.9620 43.6770 REMARK 3 T TENSOR REMARK 3 T11: 0.1340 T22: 0.0664 REMARK 3 T33: 0.0858 T12: -0.0023 REMARK 3 T13: 0.0030 T23: 0.0645 REMARK 3 L TENSOR REMARK 3 L11: 2.4297 L22: 4.5122 REMARK 3 L33: 2.0262 L12: 0.8994 REMARK 3 L13: 0.6637 L23: -1.0201 REMARK 3 S TENSOR REMARK 3 S11: 0.0164 S12: -0.0334 S13: -0.1456 REMARK 3 S21: -0.0261 S22: -0.0296 S23: -0.1216 REMARK 3 S31: -0.1096 S32: -0.0379 S33: 0.0132 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 159 A 228 REMARK 3 ORIGIN FOR THE GROUP (A): 5.9510 13.2830 30.2540 REMARK 3 T TENSOR REMARK 3 T11: 0.4641 T22: 0.0973 REMARK 3 T33: 0.1670 T12: -0.0473 REMARK 3 T13: 0.0198 T23: -0.0199 REMARK 3 L TENSOR REMARK 3 L11: 2.4090 L22: 5.3476 REMARK 3 L33: 4.4252 L12: -0.3018 REMARK 3 L13: 1.2573 L23: -3.3677 REMARK 3 S TENSOR REMARK 3 S11: -0.0155 S12: 0.4061 S13: -0.2351 REMARK 3 S21: -1.4095 S22: 0.0471 S23: -0.2984 REMARK 3 S31: 0.9272 S32: 0.0144 S33: -0.0316 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 229 A 258 REMARK 3 ORIGIN FOR THE GROUP (A): 1.0550 32.1870 22.3790 REMARK 3 T TENSOR REMARK 3 T11: 0.5109 T22: 0.1107 REMARK 3 T33: 0.2210 T12: -0.0587 REMARK 3 T13: -0.1683 T23: 0.1215 REMARK 3 L TENSOR REMARK 3 L11: 3.5827 L22: 6.2979 REMARK 3 L33: 9.0885 L12: 3.2023 REMARK 3 L13: -3.3653 L23: -2.5597 REMARK 3 S TENSOR REMARK 3 S11: -0.0937 S12: 0.2364 S13: 0.4671 REMARK 3 S21: -0.8955 S22: 0.2568 S23: 0.6565 REMARK 3 S31: 0.3622 S32: -0.4569 S33: -0.1631 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS; U VALUES: RESIDUAL ONLY REMARK 4 REMARK 4 3RNO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-APR-11. REMARK 100 THE DEPOSITION ID IS D_1000065155. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-NOV-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.12712 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 9.200 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : 0.09700 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 41.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.5 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.53700 REMARK 200 R SYM FOR SHELL (I) : 0.53700 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.846 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000 MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2O8N REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE, 1.5 M AMMONIUM REMARK 280 SULFATE, PH 4.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 63.33200 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 36.56475 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 36.16467 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 63.33200 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 36.56475 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 36.16467 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 63.33200 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 36.56475 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 36.16467 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 63.33200 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 36.56475 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 36.16467 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 63.33200 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 36.56475 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 36.16467 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 63.33200 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 36.56475 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 36.16467 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 73.12949 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 72.32933 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 73.12949 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 72.32933 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 73.12949 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 72.32933 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 73.12949 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 72.32933 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 73.12949 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 72.32933 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 73.12949 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 72.32933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 73.12949 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 72.32933 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 108.49400 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 55630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -50.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 108.49400 REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 108.49400 REMARK 350 BIOMT1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 108.49400 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 0 REMARK 465 GLN A 1 REMARK 465 GLN A 2 REMARK 465 SER A 3 REMARK 465 VAL A 4 REMARK 465 CYS A 5 REMARK 465 ARG A 6 REMARK 465 ALA A 7 REMARK 465 ARG A 8 REMARK 465 PRO A 9 REMARK 465 ILE A 10 REMARK 465 TRP A 11 REMARK 465 TRP A 12 REMARK 465 GLY A 13 REMARK 465 THR A 14 REMARK 465 GLN A 15 REMARK 465 ARG A 16 REMARK 465 ARG A 17 REMARK 465 GLY A 18 REMARK 465 SER A 19 REMARK 465 GLU A 20 REMARK 465 THR A 21 REMARK 465 MSE A 22 REMARK 465 ALA A 23 REMARK 465 GLY A 24 REMARK 465 ALA A 25 REMARK 465 HIS A 259 REMARK 465 HIS A 260 REMARK 465 HIS A 261 REMARK 465 HIS A 262 REMARK 465 HIS A 263 REMARK 465 HIS A 264 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 188 -52.20 75.70 REMARK 500 THR A 212 -60.45 78.94 REMARK 500 PHE A 232 12.96 -145.34 REMARK 500 ASP A 250 -100.54 25.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAP A 265 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP A 265 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2O8N RELATED DB: PDB REMARK 900 APO-PROTEIN REMARK 900 RELATED ID: 2DG2 RELATED DB: PDB REMARK 900 APO-PROTEIN REMARK 900 RELATED ID: 3RO7 RELATED DB: PDB REMARK 900 RELATED ID: 3ROE RELATED DB: PDB REMARK 900 RELATED ID: 3ROG RELATED DB: PDB REMARK 900 RELATED ID: 3ROX RELATED DB: PDB REMARK 900 RELATED ID: 3ROZ RELATED DB: PDB DBREF 3RNO A 1 258 UNP Q8K4Z3 AIBP_MOUSE 25 282 SEQADV 3RNO MSE A 0 UNP Q8K4Z3 EXPRESSION TAG SEQADV 3RNO HIS A 259 UNP Q8K4Z3 EXPRESSION TAG SEQADV 3RNO HIS A 260 UNP Q8K4Z3 EXPRESSION TAG SEQADV 3RNO HIS A 261 UNP Q8K4Z3 EXPRESSION TAG SEQADV 3RNO HIS A 262 UNP Q8K4Z3 EXPRESSION TAG SEQADV 3RNO HIS A 263 UNP Q8K4Z3 EXPRESSION TAG SEQADV 3RNO HIS A 264 UNP Q8K4Z3 EXPRESSION TAG SEQRES 1 A 265 MSE GLN GLN SER VAL CYS ARG ALA ARG PRO ILE TRP TRP SEQRES 2 A 265 GLY THR GLN ARG ARG GLY SER GLU THR MSE ALA GLY ALA SEQRES 3 A 265 ALA VAL LYS TYR LEU SER GLN GLU GLU ALA GLN ALA VAL SEQRES 4 A 265 ASP GLN GLU LEU PHE ASN GLU TYR GLN PHE SER VAL ASP SEQRES 5 A 265 GLN LEU MSE GLU LEU ALA GLY LEU SER CYS ALA THR ALA SEQRES 6 A 265 ILE ALA LYS ALA TYR PRO PRO THR SER MSE SER LYS SER SEQRES 7 A 265 PRO PRO THR VAL LEU VAL ILE CYS GLY PRO GLY ASN ASN SEQRES 8 A 265 GLY GLY ASP GLY LEU VAL CYS ALA ARG HIS LEU LYS LEU SEQRES 9 A 265 PHE GLY TYR GLN PRO THR ILE TYR TYR PRO LYS ARG PRO SEQRES 10 A 265 ASN LYS PRO LEU PHE THR GLY LEU VAL THR GLN CYS GLN SEQRES 11 A 265 LYS MSE ASP ILE PRO PHE LEU GLY GLU MSE PRO PRO GLU SEQRES 12 A 265 PRO MSE MSE VAL ASP GLU LEU TYR GLU LEU VAL VAL ASP SEQRES 13 A 265 ALA ILE PHE GLY PHE SER PHE LYS GLY ASP VAL ARG GLU SEQRES 14 A 265 PRO PHE HIS SER ILE LEU SER VAL LEU SER GLY LEU THR SEQRES 15 A 265 VAL PRO ILE ALA SER ILE ASP ILE PRO SER GLY TRP ASP SEQRES 16 A 265 VAL GLU LYS GLY ASN PRO SER GLY ILE GLN PRO ASP LEU SEQRES 17 A 265 LEU ILE SER LEU THR ALA PRO LYS LYS SER ALA THR HIS SEQRES 18 A 265 PHE THR GLY ARG TYR HIS TYR LEU GLY GLY ARG PHE VAL SEQRES 19 A 265 PRO PRO ALA LEU GLU LYS LYS TYR GLN LEU ASN LEU PRO SEQRES 20 A 265 SER TYR PRO ASP THR GLU CYS VAL TYR ARG LEU GLN HIS SEQRES 21 A 265 HIS HIS HIS HIS HIS MODRES 3RNO MSE A 54 MET SELENOMETHIONINE MODRES 3RNO MSE A 74 MET SELENOMETHIONINE MODRES 3RNO MSE A 131 MET SELENOMETHIONINE MODRES 3RNO MSE A 139 MET SELENOMETHIONINE MODRES 3RNO MSE A 144 MET SELENOMETHIONINE MODRES 3RNO MSE A 145 MET SELENOMETHIONINE HET MSE A 54 8 HET MSE A 74 8 HET MSE A 131 8 HET MSE A 139 8 HET MSE A 144 8 HET MSE A 145 8 HET NAP A 265 40 HETNAM MSE SELENOMETHIONINE HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 2 NAP C21 H28 N7 O17 P3 FORMUL 3 HOH *10(H2 O) HELIX 1 1 SER A 31 GLU A 45 1 15 HELIX 2 2 SER A 49 TYR A 69 1 21 HELIX 3 3 PRO A 70 MSE A 74 5 5 HELIX 4 4 GLY A 88 PHE A 104 1 17 HELIX 5 5 LYS A 118 MSE A 131 1 14 HELIX 6 6 GLU A 142 TYR A 150 1 9 HELIX 7 7 PRO A 169 GLY A 179 1 11 HELIX 8 8 LYS A 215 PHE A 221 5 7 HELIX 9 9 PRO A 234 TYR A 241 1 8 SHEET 1 A 7 GLN A 107 TYR A 111 0 SHEET 2 A 7 THR A 80 CYS A 85 1 N VAL A 83 O THR A 109 SHEET 3 A 7 LEU A 152 ALA A 156 1 O VAL A 154 N ILE A 84 SHEET 4 A 7 ILE A 184 ILE A 187 1 O ALA A 185 N ASP A 155 SHEET 5 A 7 LEU A 207 LEU A 211 1 O LEU A 207 N SER A 186 SHEET 6 A 7 TYR A 225 GLY A 229 1 O GLY A 229 N SER A 210 SHEET 7 A 7 TYR A 255 ARG A 256 -1 O TYR A 255 N LEU A 228 LINK C LEU A 53 N MSE A 54 1555 1555 1.30 LINK C MSE A 54 N GLU A 55 1555 1555 1.32 LINK C SER A 73 N MSE A 74 1555 1555 1.33 LINK C MSE A 74 N SER A 75 1555 1555 1.32 LINK C LYS A 130 N MSE A 131 1555 1555 1.33 LINK C MSE A 131 N ASP A 132 1555 1555 1.32 LINK C GLU A 138 N MSE A 139 1555 1555 1.32 LINK C MSE A 139 N PRO A 140 1555 1555 1.36 LINK C PRO A 143 N MSE A 144 1555 1555 1.30 LINK C MSE A 144 N MSE A 145 1555 1555 1.32 LINK C MSE A 145 N VAL A 146 1555 1555 1.32 CISPEP 1 SER A 77 PRO A 78 0 4.69 CISPEP 2 GLU A 168 PRO A 169 0 -4.05 SITE 1 AC1 19 PRO A 87 GLY A 88 ASN A 89 ASN A 90 SITE 2 AC1 19 ASP A 93 LYS A 114 PHE A 158 GLY A 159 SITE 3 AC1 19 PHE A 160 SER A 161 PHE A 162 LYS A 163 SITE 4 AC1 19 GLY A 164 ASP A 165 VAL A 166 ARG A 167 SITE 5 AC1 19 ASP A 188 LEU A 211 HOH A 270 CRYST1 126.664 126.664 108.494 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007895 0.004558 0.000000 0.00000 SCALE2 0.000000 0.009116 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009217 0.00000