HEADER HYDROLASE 27-APR-11 3RPM TITLE CRYSTAL STRUCTURE OF THE FIRST GH20 DOMAIN OF A NOVEL BETA-N-ACETYL- TITLE 2 HEXOSAMINIDASE STRH FROM STREPTOCOCCUS PNEUMONIAE R6 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-N-ACETYL-HEXOSAMINIDASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 176-642; COMPND 5 EC: 3.2.1.52; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 171101; SOURCE 4 STRAIN: R6; SOURCE 5 GENE: STRH; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-RIL (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS TIM BARREL, BETA-N-ACETYL-HEXOSAMINIDASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.L.JIANG,W.L.YU,J.W.ZHANG REVDAT 3 29-JUL-20 3RPM 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE REVDAT 2 09-OCT-13 3RPM 1 JRNL REVDAT 1 26-OCT-11 3RPM 0 JRNL AUTH Y.L.JIANG,W.L.YU,J.W.ZHANG,C.FROLET,A.-M.DI GUILMI,C.Z.ZHOU, JRNL AUTH 2 T.VERNET,Y.CHEN JRNL TITL STRUCTURAL BASIS FOR THE SUBSTRATE SPECIFICITY OF A NOVEL JRNL TITL 2 BETA-N-ACETYLHEXOSAMINIDASE STRH PROTEIN FROM STREPTOCOCCUS JRNL TITL 3 PNEUMONIAE R6 JRNL REF J.BIOL.CHEM. V. 286 43004 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 22013074 JRNL DOI 10.1074/JBC.M111.256578 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.56 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 202926 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5324 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.16 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6412 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.76 REMARK 3 BIN R VALUE (WORKING SET) : 0.2550 REMARK 3 BIN FREE R VALUE SET COUNT : 344 REMARK 3 BIN FREE R VALUE : 0.2770 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6809 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 62 REMARK 3 SOLVENT ATOMS : 636 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.99000 REMARK 3 B22 (A**2) : -1.99000 REMARK 3 B33 (A**2) : 2.98000 REMARK 3 B12 (A**2) : -0.99000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.130 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.089 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.356 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7029 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9504 ; 1.192 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 873 ; 5.957 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 338 ;34.674 ;25.473 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1184 ;13.599 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;15.637 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1021 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5366 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4327 ; 0.693 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6909 ; 1.309 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2702 ; 2.248 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2593 ; 3.371 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. THE FILE CONTAINS FRIEDEL PAIRS. REMARK 4 REMARK 4 3RPM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-APR-11. REMARK 100 THE DEPOSITION ID IS D_1000065221. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97893 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 209284 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 10.90 REMARK 200 R MERGE (I) : 0.10900 REMARK 200 R SYM (I) : 0.12100 REMARK 200 FOR THE DATA SET : 21.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.7 REMARK 200 DATA REDUNDANCY IN SHELL : 8.20 REMARK 200 R MERGE FOR SHELL (I) : 0.47500 REMARK 200 R SYM FOR SHELL (I) : 0.49300 REMARK 200 FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: THE FILE CONTAINS FRIEDEL PAIRS. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 4000, 0.2M AMMONIUM ACETATE, REMARK 280 0.1M SODIUM CITRATE TRIBASIC DEHYDRATE, PH 5.6, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.06800 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 72.13600 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 72.13600 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 36.06800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 176 REMARK 465 ALA A 177 REMARK 465 ALA A 178 REMARK 465 THR A 179 REMARK 465 VAL A 180 REMARK 465 LYS A 631 REMARK 465 ASN A 632 REMARK 465 LYS A 633 REMARK 465 VAL A 634 REMARK 465 ILE A 635 REMARK 465 SER A 636 REMARK 465 ILE A 637 REMARK 465 ASP A 638 REMARK 465 ALA A 639 REMARK 465 GLY A 640 REMARK 465 ARG A 641 REMARK 465 LYS A 642 REMARK 465 ARG B 176 REMARK 465 ALA B 177 REMARK 465 ALA B 178 REMARK 465 THR B 179 REMARK 465 VAL B 180 REMARK 465 PRO B 560 REMARK 465 LYS B 561 REMARK 465 ASP B 562 REMARK 465 LEU B 563 REMARK 465 ASN B 564 REMARK 465 ARG B 565 REMARK 465 TYR B 566 REMARK 465 LEU B 610 REMARK 465 THR B 611 REMARK 465 LEU B 612 REMARK 465 THR B 613 REMARK 465 PRO B 614 REMARK 465 GLU B 615 REMARK 465 ALA B 616 REMARK 465 GLN B 617 REMARK 465 LYS B 618 REMARK 465 GLU B 619 REMARK 465 GLU B 620 REMARK 465 GLU B 621 REMARK 465 ALA B 622 REMARK 465 LYS B 623 REMARK 465 ARG B 624 REMARK 465 GLU B 625 REMARK 465 VAL B 626 REMARK 465 GLU B 627 REMARK 465 LYS B 628 REMARK 465 LEU B 629 REMARK 465 ALA B 630 REMARK 465 LYS B 631 REMARK 465 ASN B 632 REMARK 465 LYS B 633 REMARK 465 VAL B 634 REMARK 465 ILE B 635 REMARK 465 SER B 636 REMARK 465 ILE B 637 REMARK 465 ASP B 638 REMARK 465 ALA B 639 REMARK 465 GLY B 640 REMARK 465 ARG B 641 REMARK 465 LYS B 642 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 469 CB CYS A 469 SG -0.129 REMARK 500 CYS B 469 CB CYS B 469 SG -0.140 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 225 92.64 -166.67 REMARK 500 ASP A 226 -73.60 69.42 REMARK 500 LYS A 350 -31.36 65.50 REMARK 500 TRP A 443 -175.10 -170.13 REMARK 500 ASP A 562 54.33 -93.91 REMARK 500 LEU A 629 26.08 -71.52 REMARK 500 ASN B 225 91.47 -164.18 REMARK 500 ASP B 226 -72.05 66.60 REMARK 500 LYS B 350 -17.45 61.73 REMARK 500 SER B 423 17.63 55.31 REMARK 500 TRP B 443 -165.60 -164.31 REMARK 500 GLU B 558 75.82 -111.76 REMARK 500 REMARK 500 REMARK: NULL DBREF 3RPM A 176 642 UNP Q8DRL6 Q8DRL6_STRR6 176 642 DBREF 3RPM B 176 642 UNP Q8DRL6 Q8DRL6_STRR6 176 642 SEQRES 1 A 467 ARG ALA ALA THR VAL ASN GLU LYS LEU ALA LYS LYS LYS SEQRES 2 A 467 ILE VAL SER ILE ASP ALA GLY ARG LYS TYR PHE SER PRO SEQRES 3 A 467 GLU GLN LEU LYS GLU ILE ILE ASP LYS ALA LYS HIS TYR SEQRES 4 A 467 GLY TYR THR ASP LEU HIS LEU LEU VAL GLY ASN ASP GLY SEQRES 5 A 467 LEU ARG PHE MSE LEU ASP ASP MSE SER ILE THR ALA ASN SEQRES 6 A 467 GLY LYS THR TYR ALA SER ASP ASP VAL LYS ARG ALA ILE SEQRES 7 A 467 GLU LYS GLY THR ASN ASP TYR TYR ASN ASP PRO ASN GLY SEQRES 8 A 467 ASN HIS LEU THR GLU SER GLN MSE THR ASP LEU ILE ASN SEQRES 9 A 467 TYR ALA LYS ASP LYS GLY ILE GLY LEU ILE PRO THR VAL SEQRES 10 A 467 ASN SER PRO GLY HIS MSE ASP ALA ILE LEU ASN ALA MSE SEQRES 11 A 467 LYS GLU LEU GLY ILE GLN ASN PRO ASN PHE SER TYR PHE SEQRES 12 A 467 GLY LYS LYS SER ALA ARG THR VAL ASP LEU ASP ASN GLU SEQRES 13 A 467 GLN ALA VAL ALA PHE THR LYS ALA LEU ILE ASP LYS TYR SEQRES 14 A 467 ALA ALA TYR PHE ALA LYS LYS THR GLU ILE PHE ASN ILE SEQRES 15 A 467 GLY LEU ASP GLU TYR ALA ASN ASP ALA THR ASP ALA LYS SEQRES 16 A 467 GLY TRP SER VAL LEU GLN ALA ASP LYS TYR TYR PRO ASN SEQRES 17 A 467 GLU GLY TYR PRO VAL LYS GLY TYR GLU LYS PHE ILE ALA SEQRES 18 A 467 TYR ALA ASN ASP LEU ALA ARG ILE VAL LYS SER HIS GLY SEQRES 19 A 467 LEU LYS PRO MSE ALA PHE ASN ASP GLY ILE TYR TYR ASN SEQRES 20 A 467 SER ASP THR SER PHE GLY SER PHE ASP LYS ASP ILE ILE SEQRES 21 A 467 VAL SER MSE TRP THR GLY GLY TRP GLY GLY TYR ASP VAL SEQRES 22 A 467 ALA SER SER LYS LEU LEU ALA GLU LYS GLY HIS GLN ILE SEQRES 23 A 467 LEU ASN THR ASN ASP ALA TRP CYS TYR VAL LEU GLY ARG SEQRES 24 A 467 ASN ALA ASP GLY GLN GLY TRP TYR ASN LEU ASP GLN GLY SEQRES 25 A 467 LEU ASN GLY ILE LYS ASN THR PRO ILE THR SER VAL PRO SEQRES 26 A 467 LYS THR GLU GLY ALA ASP ILE PRO ILE ILE GLY GLY MSE SEQRES 27 A 467 VAL ALA ALA TRP ALA ASP THR PRO SER ALA ARG TYR SER SEQRES 28 A 467 PRO SER HIS LEU PHE LYS LEU MSE ARG HIS PHE ALA ASN SEQRES 29 A 467 ALA ASN ALA GLU TYR PHE ALA ALA ASP TYR GLU SER ALA SEQRES 30 A 467 GLU GLN ALA LEU ASN GLU VAL PRO LYS ASP LEU ASN ARG SEQRES 31 A 467 TYR THR ALA GLU SER VAL ALA ALA VAL LYS GLU ALA GLU SEQRES 32 A 467 LYS ALA ILE ARG SER LEU ASP SER ASN LEU SER ARG ALA SEQRES 33 A 467 GLN GLN ASP THR ILE ASP GLN ALA ILE ALA LYS LEU GLN SEQRES 34 A 467 GLU THR VAL ASN ASN LEU THR LEU THR PRO GLU ALA GLN SEQRES 35 A 467 LYS GLU GLU GLU ALA LYS ARG GLU VAL GLU LYS LEU ALA SEQRES 36 A 467 LYS ASN LYS VAL ILE SER ILE ASP ALA GLY ARG LYS SEQRES 1 B 467 ARG ALA ALA THR VAL ASN GLU LYS LEU ALA LYS LYS LYS SEQRES 2 B 467 ILE VAL SER ILE ASP ALA GLY ARG LYS TYR PHE SER PRO SEQRES 3 B 467 GLU GLN LEU LYS GLU ILE ILE ASP LYS ALA LYS HIS TYR SEQRES 4 B 467 GLY TYR THR ASP LEU HIS LEU LEU VAL GLY ASN ASP GLY SEQRES 5 B 467 LEU ARG PHE MSE LEU ASP ASP MSE SER ILE THR ALA ASN SEQRES 6 B 467 GLY LYS THR TYR ALA SER ASP ASP VAL LYS ARG ALA ILE SEQRES 7 B 467 GLU LYS GLY THR ASN ASP TYR TYR ASN ASP PRO ASN GLY SEQRES 8 B 467 ASN HIS LEU THR GLU SER GLN MSE THR ASP LEU ILE ASN SEQRES 9 B 467 TYR ALA LYS ASP LYS GLY ILE GLY LEU ILE PRO THR VAL SEQRES 10 B 467 ASN SER PRO GLY HIS MSE ASP ALA ILE LEU ASN ALA MSE SEQRES 11 B 467 LYS GLU LEU GLY ILE GLN ASN PRO ASN PHE SER TYR PHE SEQRES 12 B 467 GLY LYS LYS SER ALA ARG THR VAL ASP LEU ASP ASN GLU SEQRES 13 B 467 GLN ALA VAL ALA PHE THR LYS ALA LEU ILE ASP LYS TYR SEQRES 14 B 467 ALA ALA TYR PHE ALA LYS LYS THR GLU ILE PHE ASN ILE SEQRES 15 B 467 GLY LEU ASP GLU TYR ALA ASN ASP ALA THR ASP ALA LYS SEQRES 16 B 467 GLY TRP SER VAL LEU GLN ALA ASP LYS TYR TYR PRO ASN SEQRES 17 B 467 GLU GLY TYR PRO VAL LYS GLY TYR GLU LYS PHE ILE ALA SEQRES 18 B 467 TYR ALA ASN ASP LEU ALA ARG ILE VAL LYS SER HIS GLY SEQRES 19 B 467 LEU LYS PRO MSE ALA PHE ASN ASP GLY ILE TYR TYR ASN SEQRES 20 B 467 SER ASP THR SER PHE GLY SER PHE ASP LYS ASP ILE ILE SEQRES 21 B 467 VAL SER MSE TRP THR GLY GLY TRP GLY GLY TYR ASP VAL SEQRES 22 B 467 ALA SER SER LYS LEU LEU ALA GLU LYS GLY HIS GLN ILE SEQRES 23 B 467 LEU ASN THR ASN ASP ALA TRP CYS TYR VAL LEU GLY ARG SEQRES 24 B 467 ASN ALA ASP GLY GLN GLY TRP TYR ASN LEU ASP GLN GLY SEQRES 25 B 467 LEU ASN GLY ILE LYS ASN THR PRO ILE THR SER VAL PRO SEQRES 26 B 467 LYS THR GLU GLY ALA ASP ILE PRO ILE ILE GLY GLY MSE SEQRES 27 B 467 VAL ALA ALA TRP ALA ASP THR PRO SER ALA ARG TYR SER SEQRES 28 B 467 PRO SER HIS LEU PHE LYS LEU MSE ARG HIS PHE ALA ASN SEQRES 29 B 467 ALA ASN ALA GLU TYR PHE ALA ALA ASP TYR GLU SER ALA SEQRES 30 B 467 GLU GLN ALA LEU ASN GLU VAL PRO LYS ASP LEU ASN ARG SEQRES 31 B 467 TYR THR ALA GLU SER VAL ALA ALA VAL LYS GLU ALA GLU SEQRES 32 B 467 LYS ALA ILE ARG SER LEU ASP SER ASN LEU SER ARG ALA SEQRES 33 B 467 GLN GLN ASP THR ILE ASP GLN ALA ILE ALA LYS LEU GLN SEQRES 34 B 467 GLU THR VAL ASN ASN LEU THR LEU THR PRO GLU ALA GLN SEQRES 35 B 467 LYS GLU GLU GLU ALA LYS ARG GLU VAL GLU LYS LEU ALA SEQRES 36 B 467 LYS ASN LYS VAL ILE SER ILE ASP ALA GLY ARG LYS MODRES 3RPM MSE A 231 MET SELENOMETHIONINE MODRES 3RPM MSE A 235 MET SELENOMETHIONINE MODRES 3RPM MSE A 274 MET SELENOMETHIONINE MODRES 3RPM MSE A 298 MET SELENOMETHIONINE MODRES 3RPM MSE A 305 MET SELENOMETHIONINE MODRES 3RPM MSE A 413 MET SELENOMETHIONINE MODRES 3RPM MSE A 438 MET SELENOMETHIONINE MODRES 3RPM MSE A 513 MET SELENOMETHIONINE MODRES 3RPM MSE A 534 MET SELENOMETHIONINE MODRES 3RPM MSE B 231 MET SELENOMETHIONINE MODRES 3RPM MSE B 235 MET SELENOMETHIONINE MODRES 3RPM MSE B 274 MET SELENOMETHIONINE MODRES 3RPM MSE B 298 MET SELENOMETHIONINE MODRES 3RPM MSE B 305 MET SELENOMETHIONINE MODRES 3RPM MSE B 413 MET SELENOMETHIONINE MODRES 3RPM MSE B 438 MET SELENOMETHIONINE MODRES 3RPM MSE B 513 MET SELENOMETHIONINE MODRES 3RPM MSE B 534 MET SELENOMETHIONINE HET MSE A 231 8 HET MSE A 235 8 HET MSE A 274 8 HET MSE A 298 8 HET MSE A 305 8 HET MSE A 413 8 HET MSE A 438 8 HET MSE A 513 8 HET MSE A 534 8 HET MSE B 231 8 HET MSE B 235 8 HET MSE B 274 8 HET MSE B 298 8 HET MSE B 305 8 HET MSE B 413 8 HET MSE B 438 8 HET MSE B 513 8 HET MSE B 534 8 HET NAG A 2 15 HET 1PE A 1 16 HET NAG B 1 15 HET 1PE B 2 16 HETNAM MSE SELENOMETHIONINE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM 1PE PENTAETHYLENE GLYCOL HETSYN 1PE PEG400 FORMUL 1 MSE 18(C5 H11 N O2 SE) FORMUL 3 NAG 2(C8 H15 N O6) FORMUL 4 1PE 2(C10 H22 O6) FORMUL 7 HOH *636(H2 O) HELIX 1 1 SER A 200 GLY A 215 1 16 HELIX 2 2 ALA A 245 TYR A 261 1 17 HELIX 3 3 GLU A 271 LYS A 284 1 14 HELIX 4 4 MSE A 298 LEU A 308 1 11 HELIX 5 5 ASN A 330 ALA A 349 1 20 HELIX 6 6 LYS A 370 TYR A 381 1 12 HELIX 7 7 LYS A 389 HIS A 408 1 20 HELIX 8 8 TYR A 420 ASP A 424 5 5 HELIX 9 9 SER A 450 LYS A 457 1 8 HELIX 10 10 ASN A 465 CYS A 469 5 5 HELIX 11 11 ASN A 483 THR A 494 1 12 HELIX 12 12 SER A 526 ASN A 541 1 16 HELIX 13 13 TYR A 549 GLU A 558 1 10 HELIX 14 14 ASP A 562 TYR A 566 5 5 HELIX 15 15 THR A 567 SER A 583 1 17 HELIX 16 16 SER A 589 ALA A 591 5 3 HELIX 17 17 GLN A 592 ASN A 609 1 18 HELIX 18 18 THR A 613 LEU A 629 1 17 HELIX 19 19 SER B 200 GLY B 215 1 16 HELIX 20 20 ALA B 245 TYR B 261 1 17 HELIX 21 21 GLU B 271 LYS B 284 1 14 HELIX 22 22 MSE B 298 LEU B 308 1 11 HELIX 23 23 ASN B 330 ALA B 349 1 20 HELIX 24 24 LYS B 370 TYR B 381 1 12 HELIX 25 25 LYS B 389 HIS B 408 1 20 HELIX 26 26 TYR B 420 ASP B 424 5 5 HELIX 27 27 SER B 450 LYS B 457 1 8 HELIX 28 28 ASN B 465 CYS B 469 5 5 HELIX 29 29 ASN B 483 THR B 494 1 12 HELIX 30 30 SER B 526 ASN B 541 1 16 HELIX 31 31 SER B 551 GLU B 558 1 8 HELIX 32 32 SER B 570 SER B 583 1 14 HELIX 33 33 SER B 589 ALA B 591 5 3 HELIX 34 34 GLN B 592 ASN B 609 1 18 SHEET 1 A10 TYR A 470 VAL A 471 0 SHEET 2 A10 GLY A 511 TRP A 517 1 O TRP A 517 N TYR A 470 SHEET 3 A10 ILE A 461 ASN A 463 1 N ASN A 463 O MSE A 513 SHEET 4 A10 ILE A 435 MSE A 438 1 N VAL A 436 O LEU A 462 SHEET 5 A10 LYS A 411 PHE A 415 1 N ALA A 414 O SER A 437 SHEET 6 A10 ILE A 354 GLY A 358 1 N PHE A 355 O LYS A 411 SHEET 7 A10 GLY A 287 SER A 294 1 N PRO A 290 O ASN A 356 SHEET 8 A10 ASP A 218 GLY A 224 1 N LEU A 219 O GLY A 287 SHEET 9 A10 LYS A 187 ASP A 193 1 N VAL A 190 O HIS A 220 SHEET 10 A10 GLY A 511 TRP A 517 1 O VAL A 514 N SER A 191 SHEET 1 B 2 PHE A 230 MSE A 231 0 SHEET 2 B 2 LEU A 269 THR A 270 1 O LEU A 269 N MSE A 231 SHEET 1 C 2 ILE A 237 ALA A 239 0 SHEET 2 C 2 LYS A 242 TYR A 244 -1 O TYR A 244 N ILE A 237 SHEET 1 D 2 ASN A 314 TYR A 317 0 SHEET 2 D 2 LYS A 320 VAL A 326 -1 O SER A 322 N PHE A 315 SHEET 1 E10 TYR B 470 VAL B 471 0 SHEET 2 E10 GLY B 511 TRP B 517 1 O TRP B 517 N TYR B 470 SHEET 3 E10 ILE B 461 ASN B 463 1 N ASN B 463 O GLY B 511 SHEET 4 E10 ILE B 435 MSE B 438 1 N VAL B 436 O LEU B 462 SHEET 5 E10 LYS B 411 PHE B 415 1 N ALA B 414 O SER B 437 SHEET 6 E10 ILE B 354 GLY B 358 1 N PHE B 355 O LYS B 411 SHEET 7 E10 GLY B 287 SER B 294 1 N PRO B 290 O ASN B 356 SHEET 8 E10 ASP B 218 GLY B 224 1 N LEU B 221 O ILE B 289 SHEET 9 E10 LYS B 187 ASP B 193 1 N VAL B 190 O HIS B 220 SHEET 10 E10 GLY B 511 TRP B 517 1 O VAL B 514 N SER B 191 SHEET 1 F 2 PHE B 230 MSE B 231 0 SHEET 2 F 2 LEU B 269 THR B 270 1 O LEU B 269 N MSE B 231 SHEET 1 G 2 ILE B 237 ALA B 239 0 SHEET 2 G 2 LYS B 242 TYR B 244 -1 O TYR B 244 N ILE B 237 SHEET 1 H 2 ASN B 314 TYR B 317 0 SHEET 2 H 2 LYS B 320 VAL B 326 -1 O LYS B 320 N TYR B 317 LINK C PHE A 230 N MSE A 231 1555 1555 1.33 LINK C MSE A 231 N LEU A 232 1555 1555 1.33 LINK C ASP A 234 N MSE A 235 1555 1555 1.33 LINK C MSE A 235 N SER A 236 1555 1555 1.33 LINK C GLN A 273 N MSE A 274 1555 1555 1.33 LINK C MSE A 274 N THR A 275 1555 1555 1.33 LINK C HIS A 297 N MSE A 298 1555 1555 1.33 LINK C MSE A 298 N ASP A 299 1555 1555 1.34 LINK C ALA A 304 N MSE A 305 1555 1555 1.33 LINK C MSE A 305 N LYS A 306 1555 1555 1.33 LINK C PRO A 412 N MSE A 413 1555 1555 1.32 LINK C MSE A 413 N ALA A 414 1555 1555 1.33 LINK C SER A 437 N MSE A 438 1555 1555 1.33 LINK C MSE A 438 N TRP A 439 1555 1555 1.34 LINK C GLY A 512 N MSE A 513 1555 1555 1.33 LINK C MSE A 513 N VAL A 514 1555 1555 1.32 LINK C LEU A 533 N MSE A 534 1555 1555 1.33 LINK C MSE A 534 N ARG A 535 1555 1555 1.33 LINK C PHE B 230 N MSE B 231 1555 1555 1.33 LINK C MSE B 231 N LEU B 232 1555 1555 1.33 LINK C ASP B 234 N MSE B 235 1555 1555 1.33 LINK C MSE B 235 N SER B 236 1555 1555 1.33 LINK C GLN B 273 N MSE B 274 1555 1555 1.33 LINK C MSE B 274 N THR B 275 1555 1555 1.33 LINK C HIS B 297 N MSE B 298 1555 1555 1.34 LINK C MSE B 298 N ASP B 299 1555 1555 1.33 LINK C ALA B 304 N MSE B 305 1555 1555 1.33 LINK C MSE B 305 N LYS B 306 1555 1555 1.33 LINK C PRO B 412 N MSE B 413 1555 1555 1.33 LINK C MSE B 413 N ALA B 414 1555 1555 1.33 LINK C SER B 437 N MSE B 438 1555 1555 1.33 LINK C MSE B 438 N TRP B 439 1555 1555 1.33 LINK C GLY B 512 N MSE B 513 1555 1555 1.33 LINK C MSE B 513 N VAL B 514 1555 1555 1.33 LINK C LEU B 533 N MSE B 534 1555 1555 1.34 LINK C MSE B 534 N ARG B 535 1555 1555 1.33 CISPEP 1 SER A 294 PRO A 295 0 2.37 CISPEP 2 SER B 294 PRO B 295 0 0.44 CRYST1 173.984 173.984 108.204 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005748 0.003318 0.000000 0.00000 SCALE2 0.000000 0.006637 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009242 0.00000