data_3RTJ # _entry.id 3RTJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3RTJ pdb_00003rtj 10.2210/pdb3rtj/pdb NDB NA1103 ? ? RCSB RCSB065358 ? ? WWPDB D_1000065358 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-08-31 2 'Structure model' 2 0 2020-07-29 3 'Structure model' 2 1 2024-10-30 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Data collection' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Structure summary' 5 3 'Structure model' 'Data collection' 6 3 'Structure model' 'Database references' 7 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' chem_comp 3 2 'Structure model' entity 4 2 'Structure model' entity_name_com 5 2 'Structure model' pdbx_branch_scheme 6 2 'Structure model' pdbx_chem_comp_identifier 7 2 'Structure model' pdbx_entity_branch 8 2 'Structure model' pdbx_entity_branch_descriptor 9 2 'Structure model' pdbx_entity_branch_link 10 2 'Structure model' pdbx_entity_branch_list 11 2 'Structure model' pdbx_entity_nonpoly 12 2 'Structure model' pdbx_molecule_features 13 2 'Structure model' pdbx_nonpoly_scheme 14 2 'Structure model' pdbx_struct_assembly_gen 15 2 'Structure model' struct_asym 16 2 'Structure model' struct_conn 17 2 'Structure model' struct_site 18 2 'Structure model' struct_site_gen 19 3 'Structure model' chem_comp 20 3 'Structure model' chem_comp_atom 21 3 'Structure model' chem_comp_bond 22 3 'Structure model' database_2 23 3 'Structure model' pdbx_entry_details 24 3 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.B_iso_or_equiv' 2 2 'Structure model' '_atom_site.Cartn_x' 3 2 'Structure model' '_atom_site.Cartn_y' 4 2 'Structure model' '_atom_site.Cartn_z' 5 2 'Structure model' '_atom_site.auth_asym_id' 6 2 'Structure model' '_atom_site.auth_atom_id' 7 2 'Structure model' '_atom_site.auth_comp_id' 8 2 'Structure model' '_atom_site.auth_seq_id' 9 2 'Structure model' '_atom_site.label_asym_id' 10 2 'Structure model' '_atom_site.label_atom_id' 11 2 'Structure model' '_atom_site.label_comp_id' 12 2 'Structure model' '_atom_site.label_entity_id' 13 2 'Structure model' '_atom_site.type_symbol' 14 2 'Structure model' '_chem_comp.name' 15 2 'Structure model' '_chem_comp.type' 16 2 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 17 2 'Structure model' '_struct_conn.pdbx_dist_value' 18 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 19 2 'Structure model' '_struct_conn.pdbx_role' 20 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 21 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 22 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 23 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 24 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 25 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 26 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 27 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 28 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 29 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 30 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 31 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 32 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 33 3 'Structure model' '_chem_comp.pdbx_synonyms' 34 3 'Structure model' '_database_2.pdbx_DOI' 35 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2011-08-31 _pdbx_database_PDB_obs_spr.pdb_id 3RTJ _pdbx_database_PDB_obs_spr.replace_pdb_id 1APG _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3RTJ _pdbx_database_status.recvd_initial_deposition_date 2011-05-03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2AAI 'native structure of ricin' unspecified PDB 3RTI 'ricin bound with formycin monophosphate' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Monzingo, A.F.' 1 'Robertus, J.D.' 2 # _citation.id primary _citation.title 'X-ray analysis of substrate analogs in the ricin A-chain active site.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 227 _citation.page_first 1136 _citation.page_last 1145 _citation.year 1992 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 1433290 _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Monzingo, A.F.' 1 ? primary 'Robertus, J.D.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;RNA (5'-R(*AP*G)-3') ; 629.454 1 ? ? ? ? 2 polymer nat 'Ricin A chain' 29936.758 1 3.2.2.22 ? ? ? 3 polymer nat 'Ricin B chain' 28989.580 1 3.2.2.22 ? ? ? 4 branched man 'beta-D-galactopyranose-(1-4)-beta-D-glucopyranose' 342.297 2 ? ? ? ? 5 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 2 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 2 'Ricin A chain, rRNA N-glycosidase, Linker peptide, Ricin B chain' 3 'Ricin A chain, rRNA N-glycosidase, Linker peptide, Ricin B chain' 4 beta-lactose # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no AG AG D ? 2 'polypeptide(L)' no no ;IFPKQYPIINFTTAGATVQSYTNFIRAVRGRLTTGADVRHEIPVLPNRVGLPINQRFILVELSNHAELSVTLALDVTNAY VVGYRAGNSAYFFHPDNQEDAEAITHLFTDVQNRYTFAFGGNYDRLEQLAGNLRENIELGNGPLEEAISALYYYSTGGTQ LPTLARSFIICIQMISEAARFQYIEGEMRTRIRYNRRSAPDPSVITLENSWGRLSTAIQESNQGAFASPIQLQRRNGSKF SVYDVSILIPIIALMVYRCAPPPSSQF ; ;IFPKQYPIINFTTAGATVQSYTNFIRAVRGRLTTGADVRHEIPVLPNRVGLPINQRFILVELSNHAELSVTLALDVTNAY VVGYRAGNSAYFFHPDNQEDAEAITHLFTDVQNRYTFAFGGNYDRLEQLAGNLRENIELGNGPLEEAISALYYYSTGGTQ LPTLARSFIICIQMISEAARFQYIEGEMRTRIRYNRRSAPDPSVITLENSWGRLSTAIQESNQGAFASPIQLQRRNGSKF SVYDVSILIPIIALMVYRCAPPPSSQF ; A ? 3 'polypeptide(L)' no no ;ADVCMDPEPIVRIVGRNGLCVDVRDGRFHNGNAIQLWPCKSNTDANQLWTLKRDNTIRSNGKCLTTYGYSPGVYVMIYDC NTAATDATRWQIWDNGTIINPRSSLVLAATSGNSGTTLTVQTNIYAVSQGWLPTNNTQPFVTTIVGLYGLCLQANSGQVW IEDCSSEKAEQQWALYADGSIRPQQNRDNCLTSDSNIRETVVKILSCGPASSGQRWMFKNDGTILNLYSGLVLDVRASDP SLKQIILYPLHGDPNQIWLPLF ; ;ADVCMDPEPIVRIVGRNGLCVDVRDGRFHNGNAIQLWPCKSNTDANQLWTLKRDNTIRSNGKCLTTYGYSPGVYVMIYDC NTAATDATRWQIWDNGTIINPRSSLVLAATSGNSGTTLTVQTNIYAVSQGWLPTNNTQPFVTTIVGLYGLCLQANSGQVW IEDCSSEKAEQQWALYADGSIRPQQNRDNCLTSDSNIRETVVKILSCGPASSGQRWMFKNDGTILNLYSGLVLDVRASDP SLKQIILYPLHGDPNQIWLPLF ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 A n 1 2 G n 2 1 ILE n 2 2 PHE n 2 3 PRO n 2 4 LYS n 2 5 GLN n 2 6 TYR n 2 7 PRO n 2 8 ILE n 2 9 ILE n 2 10 ASN n 2 11 PHE n 2 12 THR n 2 13 THR n 2 14 ALA n 2 15 GLY n 2 16 ALA n 2 17 THR n 2 18 VAL n 2 19 GLN n 2 20 SER n 2 21 TYR n 2 22 THR n 2 23 ASN n 2 24 PHE n 2 25 ILE n 2 26 ARG n 2 27 ALA n 2 28 VAL n 2 29 ARG n 2 30 GLY n 2 31 ARG n 2 32 LEU n 2 33 THR n 2 34 THR n 2 35 GLY n 2 36 ALA n 2 37 ASP n 2 38 VAL n 2 39 ARG n 2 40 HIS n 2 41 GLU n 2 42 ILE n 2 43 PRO n 2 44 VAL n 2 45 LEU n 2 46 PRO n 2 47 ASN n 2 48 ARG n 2 49 VAL n 2 50 GLY n 2 51 LEU n 2 52 PRO n 2 53 ILE n 2 54 ASN n 2 55 GLN n 2 56 ARG n 2 57 PHE n 2 58 ILE n 2 59 LEU n 2 60 VAL n 2 61 GLU n 2 62 LEU n 2 63 SER n 2 64 ASN n 2 65 HIS n 2 66 ALA n 2 67 GLU n 2 68 LEU n 2 69 SER n 2 70 VAL n 2 71 THR n 2 72 LEU n 2 73 ALA n 2 74 LEU n 2 75 ASP n 2 76 VAL n 2 77 THR n 2 78 ASN n 2 79 ALA n 2 80 TYR n 2 81 VAL n 2 82 VAL n 2 83 GLY n 2 84 TYR n 2 85 ARG n 2 86 ALA n 2 87 GLY n 2 88 ASN n 2 89 SER n 2 90 ALA n 2 91 TYR n 2 92 PHE n 2 93 PHE n 2 94 HIS n 2 95 PRO n 2 96 ASP n 2 97 ASN n 2 98 GLN n 2 99 GLU n 2 100 ASP n 2 101 ALA n 2 102 GLU n 2 103 ALA n 2 104 ILE n 2 105 THR n 2 106 HIS n 2 107 LEU n 2 108 PHE n 2 109 THR n 2 110 ASP n 2 111 VAL n 2 112 GLN n 2 113 ASN n 2 114 ARG n 2 115 TYR n 2 116 THR n 2 117 PHE n 2 118 ALA n 2 119 PHE n 2 120 GLY n 2 121 GLY n 2 122 ASN n 2 123 TYR n 2 124 ASP n 2 125 ARG n 2 126 LEU n 2 127 GLU n 2 128 GLN n 2 129 LEU n 2 130 ALA n 2 131 GLY n 2 132 ASN n 2 133 LEU n 2 134 ARG n 2 135 GLU n 2 136 ASN n 2 137 ILE n 2 138 GLU n 2 139 LEU n 2 140 GLY n 2 141 ASN n 2 142 GLY n 2 143 PRO n 2 144 LEU n 2 145 GLU n 2 146 GLU n 2 147 ALA n 2 148 ILE n 2 149 SER n 2 150 ALA n 2 151 LEU n 2 152 TYR n 2 153 TYR n 2 154 TYR n 2 155 SER n 2 156 THR n 2 157 GLY n 2 158 GLY n 2 159 THR n 2 160 GLN n 2 161 LEU n 2 162 PRO n 2 163 THR n 2 164 LEU n 2 165 ALA n 2 166 ARG n 2 167 SER n 2 168 PHE n 2 169 ILE n 2 170 ILE n 2 171 CYS n 2 172 ILE n 2 173 GLN n 2 174 MET n 2 175 ILE n 2 176 SER n 2 177 GLU n 2 178 ALA n 2 179 ALA n 2 180 ARG n 2 181 PHE n 2 182 GLN n 2 183 TYR n 2 184 ILE n 2 185 GLU n 2 186 GLY n 2 187 GLU n 2 188 MET n 2 189 ARG n 2 190 THR n 2 191 ARG n 2 192 ILE n 2 193 ARG n 2 194 TYR n 2 195 ASN n 2 196 ARG n 2 197 ARG n 2 198 SER n 2 199 ALA n 2 200 PRO n 2 201 ASP n 2 202 PRO n 2 203 SER n 2 204 VAL n 2 205 ILE n 2 206 THR n 2 207 LEU n 2 208 GLU n 2 209 ASN n 2 210 SER n 2 211 TRP n 2 212 GLY n 2 213 ARG n 2 214 LEU n 2 215 SER n 2 216 THR n 2 217 ALA n 2 218 ILE n 2 219 GLN n 2 220 GLU n 2 221 SER n 2 222 ASN n 2 223 GLN n 2 224 GLY n 2 225 ALA n 2 226 PHE n 2 227 ALA n 2 228 SER n 2 229 PRO n 2 230 ILE n 2 231 GLN n 2 232 LEU n 2 233 GLN n 2 234 ARG n 2 235 ARG n 2 236 ASN n 2 237 GLY n 2 238 SER n 2 239 LYS n 2 240 PHE n 2 241 SER n 2 242 VAL n 2 243 TYR n 2 244 ASP n 2 245 VAL n 2 246 SER n 2 247 ILE n 2 248 LEU n 2 249 ILE n 2 250 PRO n 2 251 ILE n 2 252 ILE n 2 253 ALA n 2 254 LEU n 2 255 MET n 2 256 VAL n 2 257 TYR n 2 258 ARG n 2 259 CYS n 2 260 ALA n 2 261 PRO n 2 262 PRO n 2 263 PRO n 2 264 SER n 2 265 SER n 2 266 GLN n 2 267 PHE n 3 1 ALA n 3 2 ASP n 3 3 VAL n 3 4 CYS n 3 5 MET n 3 6 ASP n 3 7 PRO n 3 8 GLU n 3 9 PRO n 3 10 ILE n 3 11 VAL n 3 12 ARG n 3 13 ILE n 3 14 VAL n 3 15 GLY n 3 16 ARG n 3 17 ASN n 3 18 GLY n 3 19 LEU n 3 20 CYS n 3 21 VAL n 3 22 ASP n 3 23 VAL n 3 24 ARG n 3 25 ASP n 3 26 GLY n 3 27 ARG n 3 28 PHE n 3 29 HIS n 3 30 ASN n 3 31 GLY n 3 32 ASN n 3 33 ALA n 3 34 ILE n 3 35 GLN n 3 36 LEU n 3 37 TRP n 3 38 PRO n 3 39 CYS n 3 40 LYS n 3 41 SER n 3 42 ASN n 3 43 THR n 3 44 ASP n 3 45 ALA n 3 46 ASN n 3 47 GLN n 3 48 LEU n 3 49 TRP n 3 50 THR n 3 51 LEU n 3 52 LYS n 3 53 ARG n 3 54 ASP n 3 55 ASN n 3 56 THR n 3 57 ILE n 3 58 ARG n 3 59 SER n 3 60 ASN n 3 61 GLY n 3 62 LYS n 3 63 CYS n 3 64 LEU n 3 65 THR n 3 66 THR n 3 67 TYR n 3 68 GLY n 3 69 TYR n 3 70 SER n 3 71 PRO n 3 72 GLY n 3 73 VAL n 3 74 TYR n 3 75 VAL n 3 76 MET n 3 77 ILE n 3 78 TYR n 3 79 ASP n 3 80 CYS n 3 81 ASN n 3 82 THR n 3 83 ALA n 3 84 ALA n 3 85 THR n 3 86 ASP n 3 87 ALA n 3 88 THR n 3 89 ARG n 3 90 TRP n 3 91 GLN n 3 92 ILE n 3 93 TRP n 3 94 ASP n 3 95 ASN n 3 96 GLY n 3 97 THR n 3 98 ILE n 3 99 ILE n 3 100 ASN n 3 101 PRO n 3 102 ARG n 3 103 SER n 3 104 SER n 3 105 LEU n 3 106 VAL n 3 107 LEU n 3 108 ALA n 3 109 ALA n 3 110 THR n 3 111 SER n 3 112 GLY n 3 113 ASN n 3 114 SER n 3 115 GLY n 3 116 THR n 3 117 THR n 3 118 LEU n 3 119 THR n 3 120 VAL n 3 121 GLN n 3 122 THR n 3 123 ASN n 3 124 ILE n 3 125 TYR n 3 126 ALA n 3 127 VAL n 3 128 SER n 3 129 GLN n 3 130 GLY n 3 131 TRP n 3 132 LEU n 3 133 PRO n 3 134 THR n 3 135 ASN n 3 136 ASN n 3 137 THR n 3 138 GLN n 3 139 PRO n 3 140 PHE n 3 141 VAL n 3 142 THR n 3 143 THR n 3 144 ILE n 3 145 VAL n 3 146 GLY n 3 147 LEU n 3 148 TYR n 3 149 GLY n 3 150 LEU n 3 151 CYS n 3 152 LEU n 3 153 GLN n 3 154 ALA n 3 155 ASN n 3 156 SER n 3 157 GLY n 3 158 GLN n 3 159 VAL n 3 160 TRP n 3 161 ILE n 3 162 GLU n 3 163 ASP n 3 164 CYS n 3 165 SER n 3 166 SER n 3 167 GLU n 3 168 LYS n 3 169 ALA n 3 170 GLU n 3 171 GLN n 3 172 GLN n 3 173 TRP n 3 174 ALA n 3 175 LEU n 3 176 TYR n 3 177 ALA n 3 178 ASP n 3 179 GLY n 3 180 SER n 3 181 ILE n 3 182 ARG n 3 183 PRO n 3 184 GLN n 3 185 GLN n 3 186 ASN n 3 187 ARG n 3 188 ASP n 3 189 ASN n 3 190 CYS n 3 191 LEU n 3 192 THR n 3 193 SER n 3 194 ASP n 3 195 SER n 3 196 ASN n 3 197 ILE n 3 198 ARG n 3 199 GLU n 3 200 THR n 3 201 VAL n 3 202 VAL n 3 203 LYS n 3 204 ILE n 3 205 LEU n 3 206 SER n 3 207 CYS n 3 208 GLY n 3 209 PRO n 3 210 ALA n 3 211 SER n 3 212 SER n 3 213 GLY n 3 214 GLN n 3 215 ARG n 3 216 TRP n 3 217 MET n 3 218 PHE n 3 219 LYS n 3 220 ASN n 3 221 ASP n 3 222 GLY n 3 223 THR n 3 224 ILE n 3 225 LEU n 3 226 ASN n 3 227 LEU n 3 228 TYR n 3 229 SER n 3 230 GLY n 3 231 LEU n 3 232 VAL n 3 233 LEU n 3 234 ASP n 3 235 VAL n 3 236 ARG n 3 237 ALA n 3 238 SER n 3 239 ASP n 3 240 PRO n 3 241 SER n 3 242 LEU n 3 243 LYS n 3 244 GLN n 3 245 ILE n 3 246 ILE n 3 247 LEU n 3 248 TYR n 3 249 PRO n 3 250 LEU n 3 251 HIS n 3 252 GLY n 3 253 ASP n 3 254 PRO n 3 255 ASN n 3 256 GLN n 3 257 ILE n 3 258 TRP n 3 259 LEU n 3 260 PRO n 3 261 LEU n 3 262 PHE n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 2 1 sample ? ? 'Castor bean' 'Ricinus communis' 3988 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? seed 3 1 sample ? ? 'Castor bean' 'Ricinus communis' 3988 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? seed # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 4 oligosaccharide 5 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 4 DGalpb1-4DGlcpb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 4 'WURCS=2.0/2,2,1/[a2122h-1b_1-5][a2112h-1b_1-5]/1-2/a4-b1' WURCS PDB2Glycan 1.1.0 3 4 '[][b-D-Glcp]{[(4+1)][b-D-Galp]{}}' LINUCS PDB-CARE ? 4 5 DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 5 5 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 6 5 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 4 2 GAL C1 O1 1 BGC O4 HO4 sing ? 2 5 2 NAG C1 O1 1 NAG O4 HO4 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BGC 'D-saccharide, beta linking' . beta-D-glucopyranose 'beta-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BGC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpb BGC 'COMMON NAME' GMML 1.0 b-D-glucopyranose BGC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Glcp BGC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 A 1 701 701 A A D . n A 1 2 G 2 702 702 G G D . n B 2 1 ILE 1 1 ? ? ? A . n B 2 2 PHE 2 2 ? ? ? A . n B 2 3 PRO 3 3 ? ? ? A . n B 2 4 LYS 4 4 ? ? ? A . n B 2 5 GLN 5 5 5 GLN GLN A . n B 2 6 TYR 6 6 6 TYR TYR A . n B 2 7 PRO 7 7 7 PRO PRO A . n B 2 8 ILE 8 8 8 ILE ILE A . n B 2 9 ILE 9 9 9 ILE ILE A . n B 2 10 ASN 10 10 10 ASN ASN A . n B 2 11 PHE 11 11 11 PHE PHE A . n B 2 12 THR 12 12 12 THR THR A . n B 2 13 THR 13 13 13 THR THR A . n B 2 14 ALA 14 14 14 ALA ALA A . n B 2 15 GLY 15 15 15 GLY GLY A . n B 2 16 ALA 16 16 16 ALA ALA A . n B 2 17 THR 17 17 17 THR THR A . n B 2 18 VAL 18 18 18 VAL VAL A . n B 2 19 GLN 19 19 19 GLN GLN A . n B 2 20 SER 20 20 20 SER SER A . n B 2 21 TYR 21 21 21 TYR TYR A . n B 2 22 THR 22 22 22 THR THR A . n B 2 23 ASN 23 23 23 ASN ASN A . n B 2 24 PHE 24 24 24 PHE PHE A . n B 2 25 ILE 25 25 25 ILE ILE A . n B 2 26 ARG 26 26 26 ARG ARG A . n B 2 27 ALA 27 27 27 ALA ALA A . n B 2 28 VAL 28 28 28 VAL VAL A . n B 2 29 ARG 29 29 29 ARG ARG A . n B 2 30 GLY 30 30 30 GLY GLY A . n B 2 31 ARG 31 31 31 ARG ARG A . n B 2 32 LEU 32 32 32 LEU LEU A . n B 2 33 THR 33 33 33 THR THR A . n B 2 34 THR 34 34 34 THR THR A . n B 2 35 GLY 35 35 35 GLY GLY A . n B 2 36 ALA 36 36 36 ALA ALA A . n B 2 37 ASP 37 37 37 ASP ASP A . n B 2 38 VAL 38 38 38 VAL VAL A . n B 2 39 ARG 39 39 39 ARG ARG A . n B 2 40 HIS 40 40 40 HIS HIS A . n B 2 41 GLU 41 41 41 GLU GLU A . n B 2 42 ILE 42 42 42 ILE ILE A . n B 2 43 PRO 43 43 43 PRO PRO A . n B 2 44 VAL 44 44 44 VAL VAL A . n B 2 45 LEU 45 45 45 LEU LEU A . n B 2 46 PRO 46 46 46 PRO PRO A . n B 2 47 ASN 47 47 47 ASN ASN A . n B 2 48 ARG 48 48 48 ARG ARG A . n B 2 49 VAL 49 49 49 VAL VAL A . n B 2 50 GLY 50 50 50 GLY GLY A . n B 2 51 LEU 51 51 51 LEU LEU A . n B 2 52 PRO 52 52 52 PRO PRO A . n B 2 53 ILE 53 53 53 ILE ILE A . n B 2 54 ASN 54 54 54 ASN ASN A . n B 2 55 GLN 55 55 55 GLN GLN A . n B 2 56 ARG 56 56 56 ARG ARG A . n B 2 57 PHE 57 57 57 PHE PHE A . n B 2 58 ILE 58 58 58 ILE ILE A . n B 2 59 LEU 59 59 59 LEU LEU A . n B 2 60 VAL 60 60 60 VAL VAL A . n B 2 61 GLU 61 61 61 GLU GLU A . n B 2 62 LEU 62 62 62 LEU LEU A . n B 2 63 SER 63 63 63 SER SER A . n B 2 64 ASN 64 64 64 ASN ASN A . n B 2 65 HIS 65 65 65 HIS HIS A . n B 2 66 ALA 66 66 66 ALA ALA A . n B 2 67 GLU 67 67 67 GLU GLU A . n B 2 68 LEU 68 68 68 LEU LEU A . n B 2 69 SER 69 69 69 SER SER A . n B 2 70 VAL 70 70 70 VAL VAL A . n B 2 71 THR 71 71 71 THR THR A . n B 2 72 LEU 72 72 72 LEU LEU A . n B 2 73 ALA 73 73 73 ALA ALA A . n B 2 74 LEU 74 74 74 LEU LEU A . n B 2 75 ASP 75 75 75 ASP ASP A . n B 2 76 VAL 76 76 76 VAL VAL A . n B 2 77 THR 77 77 77 THR THR A . n B 2 78 ASN 78 78 78 ASN ASN A . n B 2 79 ALA 79 79 79 ALA ALA A . n B 2 80 TYR 80 80 80 TYR TYR A . n B 2 81 VAL 81 81 81 VAL VAL A . n B 2 82 VAL 82 82 82 VAL VAL A . n B 2 83 GLY 83 83 83 GLY GLY A . n B 2 84 TYR 84 84 84 TYR TYR A . n B 2 85 ARG 85 85 85 ARG ARG A . n B 2 86 ALA 86 86 86 ALA ALA A . n B 2 87 GLY 87 87 87 GLY GLY A . n B 2 88 ASN 88 88 88 ASN ASN A . n B 2 89 SER 89 89 89 SER SER A . n B 2 90 ALA 90 90 90 ALA ALA A . n B 2 91 TYR 91 91 91 TYR TYR A . n B 2 92 PHE 92 92 92 PHE PHE A . n B 2 93 PHE 93 93 93 PHE PHE A . n B 2 94 HIS 94 94 94 HIS HIS A . n B 2 95 PRO 95 95 95 PRO PRO A . n B 2 96 ASP 96 96 96 ASP ASP A . n B 2 97 ASN 97 97 97 ASN ASN A . n B 2 98 GLN 98 98 98 GLN ALA A . n B 2 99 GLU 99 99 99 GLU ALA A . n B 2 100 ASP 100 100 100 ASP ASP A . n B 2 101 ALA 101 101 101 ALA ALA A . n B 2 102 GLU 102 102 102 GLU ALA A . n B 2 103 ALA 103 103 103 ALA ALA A . n B 2 104 ILE 104 104 104 ILE ILE A . n B 2 105 THR 105 105 105 THR THR A . n B 2 106 HIS 106 106 106 HIS HIS A . n B 2 107 LEU 107 107 107 LEU LEU A . n B 2 108 PHE 108 108 108 PHE PHE A . n B 2 109 THR 109 109 109 THR THR A . n B 2 110 ASP 110 110 110 ASP ASP A . n B 2 111 VAL 111 111 111 VAL VAL A . n B 2 112 GLN 112 112 112 GLN ALA A . n B 2 113 ASN 113 113 113 ASN ASN A . n B 2 114 ARG 114 114 114 ARG ARG A . n B 2 115 TYR 115 115 115 TYR TYR A . n B 2 116 THR 116 116 116 THR THR A . n B 2 117 PHE 117 117 117 PHE PHE A . n B 2 118 ALA 118 118 118 ALA ALA A . n B 2 119 PHE 119 119 119 PHE PHE A . n B 2 120 GLY 120 120 120 GLY GLY A . n B 2 121 GLY 121 121 121 GLY GLY A . n B 2 122 ASN 122 122 122 ASN ASN A . n B 2 123 TYR 123 123 123 TYR TYR A . n B 2 124 ASP 124 124 124 ASP ASP A . n B 2 125 ARG 125 125 125 ARG ARG A . n B 2 126 LEU 126 126 126 LEU LEU A . n B 2 127 GLU 127 127 127 GLU GLU A . n B 2 128 GLN 128 128 128 GLN GLN A . n B 2 129 LEU 129 129 129 LEU LEU A . n B 2 130 ALA 130 130 130 ALA ALA A . n B 2 131 GLY 131 131 131 GLY GLY A . n B 2 132 ASN 132 132 132 ASN ASN A . n B 2 133 LEU 133 133 133 LEU LEU A . n B 2 134 ARG 134 134 134 ARG ARG A . n B 2 135 GLU 135 135 135 GLU GLU A . n B 2 136 ASN 136 136 136 ASN ASN A . n B 2 137 ILE 137 137 137 ILE ILE A . n B 2 138 GLU 138 138 138 GLU GLU A . n B 2 139 LEU 139 139 139 LEU LEU A . n B 2 140 GLY 140 140 140 GLY GLY A . n B 2 141 ASN 141 141 141 ASN ASN A . n B 2 142 GLY 142 142 142 GLY GLY A . n B 2 143 PRO 143 143 143 PRO PRO A . n B 2 144 LEU 144 144 144 LEU LEU A . n B 2 145 GLU 145 145 145 GLU GLU A . n B 2 146 GLU 146 146 146 GLU GLU A . n B 2 147 ALA 147 147 147 ALA ALA A . n B 2 148 ILE 148 148 148 ILE ILE A . n B 2 149 SER 149 149 149 SER SER A . n B 2 150 ALA 150 150 150 ALA ALA A . n B 2 151 LEU 151 151 151 LEU LEU A . n B 2 152 TYR 152 152 152 TYR TYR A . n B 2 153 TYR 153 153 153 TYR TYR A . n B 2 154 TYR 154 154 154 TYR TYR A . n B 2 155 SER 155 155 155 SER SER A . n B 2 156 THR 156 156 156 THR THR A . n B 2 157 GLY 157 157 157 GLY GLY A . n B 2 158 GLY 158 158 158 GLY GLY A . n B 2 159 THR 159 159 159 THR THR A . n B 2 160 GLN 160 160 160 GLN GLN A . n B 2 161 LEU 161 161 161 LEU LEU A . n B 2 162 PRO 162 162 162 PRO PRO A . n B 2 163 THR 163 163 163 THR THR A . n B 2 164 LEU 164 164 164 LEU LEU A . n B 2 165 ALA 165 165 165 ALA ALA A . n B 2 166 ARG 166 166 166 ARG ARG A . n B 2 167 SER 167 167 167 SER SER A . n B 2 168 PHE 168 168 168 PHE PHE A . n B 2 169 ILE 169 169 169 ILE ILE A . n B 2 170 ILE 170 170 170 ILE ILE A . n B 2 171 CYS 171 171 171 CYS CYS A . n B 2 172 ILE 172 172 172 ILE ILE A . n B 2 173 GLN 173 173 173 GLN GLN A . n B 2 174 MET 174 174 174 MET MET A . n B 2 175 ILE 175 175 175 ILE ILE A . n B 2 176 SER 176 176 176 SER SER A . n B 2 177 GLU 177 177 177 GLU GLU A . n B 2 178 ALA 178 178 178 ALA ALA A . n B 2 179 ALA 179 179 179 ALA ALA A . n B 2 180 ARG 180 180 180 ARG ARG A . n B 2 181 PHE 181 181 181 PHE PHE A . n B 2 182 GLN 182 182 182 GLN GLN A . n B 2 183 TYR 183 183 183 TYR TYR A . n B 2 184 ILE 184 184 184 ILE ILE A . n B 2 185 GLU 185 185 185 GLU GLU A . n B 2 186 GLY 186 186 186 GLY GLY A . n B 2 187 GLU 187 187 187 GLU GLU A . n B 2 188 MET 188 188 188 MET MET A . n B 2 189 ARG 189 189 189 ARG ARG A . n B 2 190 THR 190 190 190 THR THR A . n B 2 191 ARG 191 191 191 ARG ARG A . n B 2 192 ILE 192 192 192 ILE ILE A . n B 2 193 ARG 193 193 193 ARG ARG A . n B 2 194 TYR 194 194 194 TYR TYR A . n B 2 195 ASN 195 195 195 ASN ASN A . n B 2 196 ARG 196 196 196 ARG ARG A . n B 2 197 ARG 197 197 197 ARG ARG A . n B 2 198 SER 198 198 198 SER SER A . n B 2 199 ALA 199 199 199 ALA ALA A . n B 2 200 PRO 200 200 200 PRO PRO A . n B 2 201 ASP 201 201 201 ASP ASP A . n B 2 202 PRO 202 202 202 PRO PRO A . n B 2 203 SER 203 203 203 SER SER A . n B 2 204 VAL 204 204 204 VAL VAL A . n B 2 205 ILE 205 205 205 ILE ILE A . n B 2 206 THR 206 206 206 THR THR A . n B 2 207 LEU 207 207 207 LEU LEU A . n B 2 208 GLU 208 208 208 GLU GLU A . n B 2 209 ASN 209 209 209 ASN ASN A . n B 2 210 SER 210 210 210 SER SER A . n B 2 211 TRP 211 211 211 TRP TRP A . n B 2 212 GLY 212 212 212 GLY GLY A . n B 2 213 ARG 213 213 213 ARG ARG A . n B 2 214 LEU 214 214 214 LEU LEU A . n B 2 215 SER 215 215 215 SER SER A . n B 2 216 THR 216 216 216 THR THR A . n B 2 217 ALA 217 217 217 ALA ALA A . n B 2 218 ILE 218 218 218 ILE ILE A . n B 2 219 GLN 219 219 219 GLN GLN A . n B 2 220 GLU 220 220 220 GLU GLU A . n B 2 221 SER 221 221 221 SER SER A . n B 2 222 ASN 222 222 222 ASN ASN A . n B 2 223 GLN 223 223 223 GLN GLN A . n B 2 224 GLY 224 224 224 GLY GLY A . n B 2 225 ALA 225 225 225 ALA ALA A . n B 2 226 PHE 226 226 226 PHE PHE A . n B 2 227 ALA 227 227 227 ALA ALA A . n B 2 228 SER 228 228 228 SER SER A . n B 2 229 PRO 229 229 229 PRO PRO A . n B 2 230 ILE 230 230 230 ILE ILE A . n B 2 231 GLN 231 231 231 GLN GLN A . n B 2 232 LEU 232 232 232 LEU LEU A . n B 2 233 GLN 233 233 233 GLN GLN A . n B 2 234 ARG 234 234 234 ARG ARG A . n B 2 235 ARG 235 235 235 ARG ARG A . n B 2 236 ASN 236 236 236 ASN ASN A . n B 2 237 GLY 237 237 237 GLY GLY A . n B 2 238 SER 238 238 238 SER SER A . n B 2 239 LYS 239 239 239 LYS LYS A . n B 2 240 PHE 240 240 240 PHE PHE A . n B 2 241 SER 241 241 241 SER SER A . n B 2 242 VAL 242 242 242 VAL VAL A . n B 2 243 TYR 243 243 243 TYR TYR A . n B 2 244 ASP 244 244 244 ASP ASP A . n B 2 245 VAL 245 245 245 VAL VAL A . n B 2 246 SER 246 246 246 SER SER A . n B 2 247 ILE 247 247 247 ILE ILE A . n B 2 248 LEU 248 248 248 LEU LEU A . n B 2 249 ILE 249 249 249 ILE ILE A . n B 2 250 PRO 250 250 250 PRO PRO A . n B 2 251 ILE 251 251 251 ILE ILE A . n B 2 252 ILE 252 252 252 ILE ILE A . n B 2 253 ALA 253 253 253 ALA ALA A . n B 2 254 LEU 254 254 254 LEU LEU A . n B 2 255 MET 255 255 255 MET MET A . n B 2 256 VAL 256 256 256 VAL VAL A . n B 2 257 TYR 257 257 257 TYR TYR A . n B 2 258 ARG 258 258 258 ARG ARG A . n B 2 259 CYS 259 259 259 CYS CYS A . n B 2 260 ALA 260 260 260 ALA ALA A . n B 2 261 PRO 261 261 261 PRO PRO A . n B 2 262 PRO 262 262 262 PRO PRO A . n B 2 263 PRO 263 263 ? ? ? A . n B 2 264 SER 264 264 ? ? ? A . n B 2 265 SER 265 265 ? ? ? A . n B 2 266 GLN 266 266 ? ? ? A . n B 2 267 PHE 267 267 ? ? ? A . n C 3 1 ALA 1 1 1 ALA ALA B . n C 3 2 ASP 2 2 2 ASP ASP B . n C 3 3 VAL 3 3 3 VAL VAL B . n C 3 4 CYS 4 4 4 CYS CYS B . n C 3 5 MET 5 5 5 MET MET B . n C 3 6 ASP 6 6 6 ASP ASP B . n C 3 7 PRO 7 7 7 PRO PRO B . n C 3 8 GLU 8 8 8 GLU GLU B . n C 3 9 PRO 9 9 9 PRO PRO B . n C 3 10 ILE 10 10 10 ILE ILE B . n C 3 11 VAL 11 11 11 VAL VAL B . n C 3 12 ARG 12 12 12 ARG ARG B . n C 3 13 ILE 13 13 13 ILE ILE B . n C 3 14 VAL 14 14 14 VAL VAL B . n C 3 15 GLY 15 15 15 GLY GLY B . n C 3 16 ARG 16 16 16 ARG ARG B . n C 3 17 ASN 17 17 17 ASN ASN B . n C 3 18 GLY 18 18 18 GLY GLY B . n C 3 19 LEU 19 19 19 LEU LEU B . n C 3 20 CYS 20 20 20 CYS CYS B . n C 3 21 VAL 21 21 21 VAL VAL B . n C 3 22 ASP 22 22 22 ASP ASP B . n C 3 23 VAL 23 23 23 VAL VAL B . n C 3 24 ARG 24 24 24 ARG ARG B . n C 3 25 ASP 25 25 25 ASP ASP B . n C 3 26 GLY 26 26 26 GLY GLY B . n C 3 27 ARG 27 27 27 ARG ARG B . n C 3 28 PHE 28 28 28 PHE PHE B . n C 3 29 HIS 29 29 29 HIS HIS B . n C 3 30 ASN 30 30 30 ASN ASN B . n C 3 31 GLY 31 31 31 GLY GLY B . n C 3 32 ASN 32 32 32 ASN ASN B . n C 3 33 ALA 33 33 33 ALA ALA B . n C 3 34 ILE 34 34 34 ILE ILE B . n C 3 35 GLN 35 35 35 GLN GLN B . n C 3 36 LEU 36 36 36 LEU LEU B . n C 3 37 TRP 37 37 37 TRP TRP B . n C 3 38 PRO 38 38 38 PRO PRO B . n C 3 39 CYS 39 39 39 CYS CYS B . n C 3 40 LYS 40 40 40 LYS LYS B . n C 3 41 SER 41 41 41 SER SER B . n C 3 42 ASN 42 42 42 ASN ASN B . n C 3 43 THR 43 43 43 THR THR B . n C 3 44 ASP 44 44 44 ASP ASP B . n C 3 45 ALA 45 45 45 ALA ALA B . n C 3 46 ASN 46 46 46 ASN ASN B . n C 3 47 GLN 47 47 47 GLN GLN B . n C 3 48 LEU 48 48 48 LEU LEU B . n C 3 49 TRP 49 49 49 TRP TRP B . n C 3 50 THR 50 50 50 THR THR B . n C 3 51 LEU 51 51 51 LEU LEU B . n C 3 52 LYS 52 52 52 LYS LYS B . n C 3 53 ARG 53 53 53 ARG ARG B . n C 3 54 ASP 54 54 54 ASP ASP B . n C 3 55 ASN 55 55 55 ASN ASN B . n C 3 56 THR 56 56 56 THR THR B . n C 3 57 ILE 57 57 57 ILE ILE B . n C 3 58 ARG 58 58 58 ARG ARG B . n C 3 59 SER 59 59 59 SER SER B . n C 3 60 ASN 60 60 60 ASN ASN B . n C 3 61 GLY 61 61 61 GLY GLY B . n C 3 62 LYS 62 62 62 LYS LYS B . n C 3 63 CYS 63 63 63 CYS CYS B . n C 3 64 LEU 64 64 64 LEU LEU B . n C 3 65 THR 65 65 65 THR THR B . n C 3 66 THR 66 66 66 THR THR B . n C 3 67 TYR 67 67 67 TYR TYR B . n C 3 68 GLY 68 68 68 GLY GLY B . n C 3 69 TYR 69 69 69 TYR TYR B . n C 3 70 SER 70 70 70 SER SER B . n C 3 71 PRO 71 71 71 PRO PRO B . n C 3 72 GLY 72 72 72 GLY GLY B . n C 3 73 VAL 73 73 73 VAL VAL B . n C 3 74 TYR 74 74 74 TYR TYR B . n C 3 75 VAL 75 75 75 VAL VAL B . n C 3 76 MET 76 76 76 MET MET B . n C 3 77 ILE 77 77 77 ILE ILE B . n C 3 78 TYR 78 78 78 TYR TYR B . n C 3 79 ASP 79 79 79 ASP ASP B . n C 3 80 CYS 80 80 80 CYS CYS B . n C 3 81 ASN 81 81 81 ASN ASN B . n C 3 82 THR 82 82 82 THR THR B . n C 3 83 ALA 83 83 83 ALA ALA B . n C 3 84 ALA 84 84 84 ALA ALA B . n C 3 85 THR 85 85 85 THR THR B . n C 3 86 ASP 86 86 86 ASP ASP B . n C 3 87 ALA 87 87 87 ALA ALA B . n C 3 88 THR 88 88 88 THR THR B . n C 3 89 ARG 89 89 89 ARG ARG B . n C 3 90 TRP 90 90 90 TRP TRP B . n C 3 91 GLN 91 91 91 GLN GLN B . n C 3 92 ILE 92 92 92 ILE ILE B . n C 3 93 TRP 93 93 93 TRP TRP B . n C 3 94 ASP 94 94 94 ASP ASP B . n C 3 95 ASN 95 95 95 ASN ASN B . n C 3 96 GLY 96 96 96 GLY GLY B . n C 3 97 THR 97 97 97 THR THR B . n C 3 98 ILE 98 98 98 ILE ILE B . n C 3 99 ILE 99 99 99 ILE ILE B . n C 3 100 ASN 100 100 100 ASN ASN B . n C 3 101 PRO 101 101 101 PRO PRO B . n C 3 102 ARG 102 102 102 ARG ARG B . n C 3 103 SER 103 103 103 SER SER B . n C 3 104 SER 104 104 104 SER SER B . n C 3 105 LEU 105 105 105 LEU LEU B . n C 3 106 VAL 106 106 106 VAL VAL B . n C 3 107 LEU 107 107 107 LEU LEU B . n C 3 108 ALA 108 108 108 ALA ALA B . n C 3 109 ALA 109 109 109 ALA ALA B . n C 3 110 THR 110 110 110 THR THR B . n C 3 111 SER 111 111 111 SER SER B . n C 3 112 GLY 112 112 112 GLY GLY B . n C 3 113 ASN 113 113 113 ASN ASN B . n C 3 114 SER 114 114 114 SER SER B . n C 3 115 GLY 115 115 115 GLY GLY B . n C 3 116 THR 116 116 116 THR THR B . n C 3 117 THR 117 117 117 THR THR B . n C 3 118 LEU 118 118 118 LEU LEU B . n C 3 119 THR 119 119 119 THR THR B . n C 3 120 VAL 120 120 120 VAL VAL B . n C 3 121 GLN 121 121 121 GLN GLN B . n C 3 122 THR 122 122 122 THR THR B . n C 3 123 ASN 123 123 123 ASN ASN B . n C 3 124 ILE 124 124 124 ILE ILE B . n C 3 125 TYR 125 125 125 TYR TYR B . n C 3 126 ALA 126 126 126 ALA ALA B . n C 3 127 VAL 127 127 127 VAL VAL B . n C 3 128 SER 128 128 128 SER SER B . n C 3 129 GLN 129 129 129 GLN GLN B . n C 3 130 GLY 130 130 130 GLY GLY B . n C 3 131 TRP 131 131 131 TRP TRP B . n C 3 132 LEU 132 132 132 LEU LEU B . n C 3 133 PRO 133 133 133 PRO PRO B . n C 3 134 THR 134 134 134 THR THR B . n C 3 135 ASN 135 135 135 ASN ASN B . n C 3 136 ASN 136 136 136 ASN ASN B . n C 3 137 THR 137 137 137 THR THR B . n C 3 138 GLN 138 138 138 GLN GLN B . n C 3 139 PRO 139 139 139 PRO PRO B . n C 3 140 PHE 140 140 140 PHE PHE B . n C 3 141 VAL 141 141 141 VAL VAL B . n C 3 142 THR 142 142 142 THR THR B . n C 3 143 THR 143 143 143 THR THR B . n C 3 144 ILE 144 144 144 ILE ILE B . n C 3 145 VAL 145 145 145 VAL VAL B . n C 3 146 GLY 146 146 146 GLY GLY B . n C 3 147 LEU 147 147 147 LEU LEU B . n C 3 148 TYR 148 148 148 TYR TYR B . n C 3 149 GLY 149 149 149 GLY GLY B . n C 3 150 LEU 150 150 150 LEU LEU B . n C 3 151 CYS 151 151 151 CYS CYS B . n C 3 152 LEU 152 152 152 LEU LEU B . n C 3 153 GLN 153 153 153 GLN GLN B . n C 3 154 ALA 154 154 154 ALA ALA B . n C 3 155 ASN 155 155 155 ASN ALA B . n C 3 156 SER 156 156 156 SER SER B . n C 3 157 GLY 157 157 157 GLY GLY B . n C 3 158 GLN 158 158 158 GLN GLN B . n C 3 159 VAL 159 159 159 VAL VAL B . n C 3 160 TRP 160 160 160 TRP TRP B . n C 3 161 ILE 161 161 161 ILE ILE B . n C 3 162 GLU 162 162 162 GLU GLU B . n C 3 163 ASP 163 163 163 ASP ASP B . n C 3 164 CYS 164 164 164 CYS CYS B . n C 3 165 SER 165 165 165 SER ALA B . n C 3 166 SER 166 166 166 SER SER B . n C 3 167 GLU 167 167 167 GLU GLU B . n C 3 168 LYS 168 168 168 LYS LYS B . n C 3 169 ALA 169 169 169 ALA ALA B . n C 3 170 GLU 170 170 170 GLU ALA B . n C 3 171 GLN 171 171 171 GLN GLN B . n C 3 172 GLN 172 172 172 GLN ALA B . n C 3 173 TRP 173 173 173 TRP TRP B . n C 3 174 ALA 174 174 174 ALA ALA B . n C 3 175 LEU 175 175 175 LEU LEU B . n C 3 176 TYR 176 176 176 TYR TYR B . n C 3 177 ALA 177 177 177 ALA ALA B . n C 3 178 ASP 178 178 178 ASP ASP B . n C 3 179 GLY 179 179 179 GLY GLY B . n C 3 180 SER 180 180 180 SER SER B . n C 3 181 ILE 181 181 181 ILE ILE B . n C 3 182 ARG 182 182 182 ARG ARG B . n C 3 183 PRO 183 183 183 PRO PRO B . n C 3 184 GLN 184 184 184 GLN GLN B . n C 3 185 GLN 185 185 185 GLN GLN B . n C 3 186 ASN 186 186 186 ASN ASN B . n C 3 187 ARG 187 187 187 ARG ARG B . n C 3 188 ASP 188 188 188 ASP ASP B . n C 3 189 ASN 189 189 189 ASN ASN B . n C 3 190 CYS 190 190 190 CYS CYS B . n C 3 191 LEU 191 191 191 LEU LEU B . n C 3 192 THR 192 192 192 THR THR B . n C 3 193 SER 193 193 193 SER SER B . n C 3 194 ASP 194 194 194 ASP ASP B . n C 3 195 SER 195 195 195 SER ALA B . n C 3 196 ASN 196 196 196 ASN ASN B . n C 3 197 ILE 197 197 197 ILE ILE B . n C 3 198 ARG 198 198 198 ARG ARG B . n C 3 199 GLU 199 199 199 GLU GLU B . n C 3 200 THR 200 200 200 THR THR B . n C 3 201 VAL 201 201 201 VAL VAL B . n C 3 202 VAL 202 202 202 VAL VAL B . n C 3 203 LYS 203 203 203 LYS LYS B . n C 3 204 ILE 204 204 204 ILE ILE B . n C 3 205 LEU 205 205 205 LEU LEU B . n C 3 206 SER 206 206 206 SER SER B . n C 3 207 CYS 207 207 207 CYS CYS B . n C 3 208 GLY 208 208 208 GLY GLY B . n C 3 209 PRO 209 209 209 PRO PRO B . n C 3 210 ALA 210 210 210 ALA ALA B . n C 3 211 SER 211 211 211 SER SER B . n C 3 212 SER 212 212 212 SER SER B . n C 3 213 GLY 213 213 213 GLY GLY B . n C 3 214 GLN 214 214 214 GLN GLN B . n C 3 215 ARG 215 215 215 ARG ARG B . n C 3 216 TRP 216 216 216 TRP TRP B . n C 3 217 MET 217 217 217 MET MET B . n C 3 218 PHE 218 218 218 PHE PHE B . n C 3 219 LYS 219 219 219 LYS LYS B . n C 3 220 ASN 220 220 220 ASN ASN B . n C 3 221 ASP 221 221 221 ASP ASP B . n C 3 222 GLY 222 222 222 GLY GLY B . n C 3 223 THR 223 223 223 THR THR B . n C 3 224 ILE 224 224 224 ILE ILE B . n C 3 225 LEU 225 225 225 LEU LEU B . n C 3 226 ASN 226 226 226 ASN ASN B . n C 3 227 LEU 227 227 227 LEU LEU B . n C 3 228 TYR 228 228 228 TYR TYR B . n C 3 229 SER 229 229 229 SER SER B . n C 3 230 GLY 230 230 230 GLY GLY B . n C 3 231 LEU 231 231 231 LEU LEU B . n C 3 232 VAL 232 232 232 VAL VAL B . n C 3 233 LEU 233 233 233 LEU LEU B . n C 3 234 ASP 234 234 234 ASP ASP B . n C 3 235 VAL 235 235 235 VAL VAL B . n C 3 236 ARG 236 236 236 ARG ARG B . n C 3 237 ALA 237 237 237 ALA ALA B . n C 3 238 SER 238 238 238 SER SER B . n C 3 239 ASP 239 239 239 ASP ASP B . n C 3 240 PRO 240 240 240 PRO PRO B . n C 3 241 SER 241 241 241 SER SER B . n C 3 242 LEU 242 242 242 LEU LEU B . n C 3 243 LYS 243 243 243 LYS LYS B . n C 3 244 GLN 244 244 244 GLN GLN B . n C 3 245 ILE 245 245 245 ILE ILE B . n C 3 246 ILE 246 246 246 ILE ILE B . n C 3 247 LEU 247 247 247 LEU LEU B . n C 3 248 TYR 248 248 248 TYR TYR B . n C 3 249 PRO 249 249 249 PRO PRO B . n C 3 250 LEU 250 250 250 LEU LEU B . n C 3 251 HIS 251 251 251 HIS HIS B . n C 3 252 GLY 252 252 252 GLY GLY B . n C 3 253 ASP 253 253 253 ASP ASP B . n C 3 254 PRO 254 254 254 PRO PRO B . n C 3 255 ASN 255 255 255 ASN ASN B . n C 3 256 GLN 256 256 256 GLN GLN B . n C 3 257 ILE 257 257 257 ILE ILE B . n C 3 258 TRP 258 258 258 TRP TRP B . n C 3 259 LEU 259 259 259 LEU LEU B . n C 3 260 PRO 260 260 260 PRO PRO B . n C 3 261 LEU 261 261 261 LEU LEU B . n C 3 262 PHE 262 262 262 PHE PHE B . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero D 4 BGC 1 C BGC 1 B BGC 265 n D 4 GAL 2 C GAL 2 B GAL 264 n E 4 BGC 1 E BGC 1 B BGC 268 n E 4 GAL 2 E GAL 2 B GAL 267 n F 5 NAG 1 F NAG 1 B NAG 270 n F 5 NAG 2 F NAG 2 B NAG 271 n G 5 NAG 1 G NAG 1 B NAG 280 n G 5 NAG 2 G NAG 2 B NAG 281 n # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 98 ? CG ? B GLN 98 CG 2 1 Y 1 A GLN 98 ? CD ? B GLN 98 CD 3 1 Y 1 A GLN 98 ? OE1 ? B GLN 98 OE1 4 1 Y 1 A GLN 98 ? NE2 ? B GLN 98 NE2 5 1 Y 1 A GLU 99 ? CG ? B GLU 99 CG 6 1 Y 1 A GLU 99 ? CD ? B GLU 99 CD 7 1 Y 1 A GLU 99 ? OE1 ? B GLU 99 OE1 8 1 Y 1 A GLU 99 ? OE2 ? B GLU 99 OE2 9 1 Y 1 A GLU 102 ? CG ? B GLU 102 CG 10 1 Y 1 A GLU 102 ? CD ? B GLU 102 CD 11 1 Y 1 A GLU 102 ? OE1 ? B GLU 102 OE1 12 1 Y 1 A GLU 102 ? OE2 ? B GLU 102 OE2 13 1 Y 1 A GLN 112 ? CG ? B GLN 112 CG 14 1 Y 1 A GLN 112 ? CD ? B GLN 112 CD 15 1 Y 1 A GLN 112 ? OE1 ? B GLN 112 OE1 16 1 Y 1 A GLN 112 ? NE2 ? B GLN 112 NE2 17 1 Y 1 B ASN 155 ? CG ? C ASN 155 CG 18 1 Y 1 B ASN 155 ? OD1 ? C ASN 155 OD1 19 1 Y 1 B ASN 155 ? ND2 ? C ASN 155 ND2 20 1 Y 1 B SER 165 ? OG ? C SER 165 OG 21 1 Y 1 B GLU 170 ? CG ? C GLU 170 CG 22 1 Y 1 B GLU 170 ? CD ? C GLU 170 CD 23 1 Y 1 B GLU 170 ? OE1 ? C GLU 170 OE1 24 1 Y 1 B GLU 170 ? OE2 ? C GLU 170 OE2 25 1 Y 1 B GLN 172 ? CG ? C GLN 172 CG 26 1 Y 1 B GLN 172 ? CD ? C GLN 172 CD 27 1 Y 1 B GLN 172 ? OE1 ? C GLN 172 OE1 28 1 Y 1 B GLN 172 ? NE2 ? C GLN 172 NE2 29 1 Y 1 B SER 195 ? OG ? C SER 195 OG # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal San 'data collection' 'Diego Multiwire Systems' ? 1 X-PLOR 'model building' . ? 2 X-PLOR refinement . ? 3 San 'data reduction' 'Diego Multiwire Systems' ? 4 San 'data scaling' 'Diego Multiwire Systems' ? 5 X-PLOR phasing . ? 6 # _cell.entry_id 3RTJ _cell.length_a 72.740 _cell.length_b 78.490 _cell.length_c 114.340 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3RTJ _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3RTJ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.74 _exptl_crystal.density_percent_sol 55.11 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method batch _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.75 _exptl_crystal_grow.pdbx_details '11.5% PEG 8000, 0.05 M sodium acetate, 2 mM lactose, pH 4.75, batch, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 298 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type 'San Diego Multiwire Systems' _diffrn_detector.pdbx_collection_date 1991-06-11 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator graphite _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'ELLIOTT GX-20' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 3RTJ _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low ? _reflns.d_resolution_high 3.0 _reflns.number_obs 8250 _reflns.number_all 8250 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 3RTJ _refine.ls_number_reflns_obs 8250 _refine.ls_number_reflns_all 8250 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0. _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.91 _refine.ls_d_res_high 3.0 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.198 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4045 _refine_hist.pdbx_number_atoms_nucleic_acid 42 _refine_hist.pdbx_number_atoms_ligand 102 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 4189 _refine_hist.d_res_high 3.0 _refine_hist.d_res_low 19.91 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id x_bond_d 0.014 ? ? ? ? 'X-RAY DIFFRACTION' x_angle_deg 4.0 ? ? ? ? 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3RTJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3RTJ _struct.title 'Crystal structure of ricin bound with dinucleotide ApG' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3RTJ _struct_keywords.pdbx_keywords HYDROLASE/RNA _struct_keywords.text ;enzyme-substrate complex, glycosidase ribosome-inactivating protein lectin glycoprotein, lactose binding, glycosylation, HYDROLASE, HYDROLASE-RNA complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP RICI_RICCO P02879 2 ;IFPKQYPIINFTTAGATVQSYTNFIRAVRGRLTTGADVRHEIPVLPNRVGLPINQRFILVELSNHAELSVTLALDVTNAY VVGYRAGNSAYFFHPDNQEDAEAITHLFTDVQNRYTFAFGGNYDRLEQLAGNLRENIELGNGPLEEAISALYYYSTGGTQ LPTLARSFIICIQMISEAARFQYIEGEMRTRIRYNRRSAPDPSVITLENSWGRLSTAIQESNQGAFASPIQLQRRNGSKF SVYDVSILIPIIALMVYRCAPPPSSQF ; 36 ? 2 UNP RICI_RICCO P02879 3 ;ADVCMDPEPIVRIVGRNGLCVDVRDGRFHNGNAIQLWPCKSNTDANQLWTLKRDNTIRSNGKCLTTYGYSPGVYVMIYDC NTAATDATRWQIWDNGTIINPRSSLVLAATSGNSGTTLTVQTNIYAVSQGWLPTNNTQPFVTTIVGLYGLCLQANSGQVW IEDCSSEKAEQQWALYADGSIRPQQNRDNCLTSDSNIRETVVKILSCGPASSGQRWMFKNDGTILNLYSGLVLDVRASDP SLKQIILYPLHGDPNQIWLPLF ; 315 ? 3 PDB 3RTJ 3RTJ 1 AG ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3RTJ A 1 ? 267 ? P02879 36 ? 302 ? 1 267 2 2 3RTJ B 1 ? 262 ? P02879 315 ? 576 ? 1 262 3 3 3RTJ D 1 ? 2 ? 3RTJ 701 ? 702 ? 701 702 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR B 17 ? THR B 33 ? THR A 17 THR A 33 1 ? 17 HELX_P HELX_P2 2 ASN B 97 ? ILE B 104 ? ASN A 97 ILE A 104 1 ? 8 HELX_P HELX_P3 3 THR B 105 ? LEU B 107 ? THR A 105 LEU A 107 5 ? 3 HELX_P HELX_P4 4 ASN B 122 ? GLY B 131 ? ASN A 122 GLY A 131 1 ? 10 HELX_P HELX_P5 5 GLY B 140 ? TYR B 154 ? GLY A 140 TYR A 154 1 ? 15 HELX_P HELX_P6 6 GLN B 160 ? PHE B 181 ? GLN A 160 PHE A 181 1 ? 22 HELX_P HELX_P7 7 PHE B 181 ? TYR B 194 ? PHE A 181 TYR A 194 1 ? 14 HELX_P HELX_P8 8 ASP B 201 ? SER B 210 ? ASP A 201 SER A 210 1 ? 10 HELX_P HELX_P9 9 SER B 210 ? GLU B 220 ? SER A 210 GLU A 220 1 ? 11 HELX_P HELX_P10 10 GLY C 15 ? LEU C 19 ? GLY B 15 LEU B 19 5 ? 5 HELX_P HELX_P11 11 ASP C 25 ? ARG C 27 ? ASP B 25 ARG B 27 5 ? 3 HELX_P HELX_P12 12 ALA C 84 ? THR C 88 ? ALA B 84 THR B 88 5 ? 5 HELX_P HELX_P13 13 ALA C 126 ? GLY C 130 ? ALA B 126 GLY B 130 5 ? 5 HELX_P HELX_P14 14 GLY C 146 ? LEU C 150 ? GLY B 146 LEU B 150 5 ? 5 HELX_P HELX_P15 15 ALA C 237 ? LYS C 243 ? ALA B 237 LYS B 243 5 ? 7 HELX_P HELX_P16 16 ASP C 253 ? ILE C 257 ? ASP B 253 ILE B 257 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? B CYS 259 SG ? ? ? 1_555 C CYS 4 SG ? ? A CYS 259 B CYS 4 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf2 disulf ? ? C CYS 20 SG ? ? ? 1_555 C CYS 39 SG ? ? B CYS 20 B CYS 39 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf3 disulf ? ? C CYS 63 SG ? ? ? 1_555 C CYS 80 SG ? ? B CYS 63 B CYS 80 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf4 disulf ? ? C CYS 151 SG ? ? ? 1_555 C CYS 164 SG ? ? B CYS 151 B CYS 164 1_555 ? ? ? ? ? ? ? 2.024 ? ? disulf5 disulf ? ? C CYS 190 SG ? ? ? 1_555 C CYS 207 SG ? ? B CYS 190 B CYS 207 1_555 ? ? ? ? ? ? ? 2.027 ? ? covale1 covale one ? C ASN 95 ND2 ? ? ? 1_555 F NAG . C1 ? ? B ASN 95 F NAG 1 1_555 ? ? ? ? ? ? ? 1.447 ? N-Glycosylation covale2 covale one ? C ASN 135 ND2 ? ? ? 1_555 G NAG . C1 ? ? B ASN 135 G NAG 1 1_555 ? ? ? ? ? ? ? 1.449 ? N-Glycosylation covale3 covale both ? D BGC . O4 ? ? ? 1_555 D GAL . C1 ? ? C BGC 1 C GAL 2 1_555 ? ? ? ? ? ? ? 1.388 ? ? covale4 covale both ? E BGC . O4 ? ? ? 1_555 E GAL . C1 ? ? E BGC 1 E GAL 2 1_555 ? ? ? ? ? ? ? 1.387 ? ? covale5 covale both ? F NAG . O4 ? ? ? 1_555 F NAG . C1 ? ? F NAG 1 F NAG 2 1_555 ? ? ? ? ? ? ? 1.397 ? ? covale6 covale both ? G NAG . O4 ? ? ? 1_555 G NAG . C1 ? ? G NAG 1 G NAG 2 1_555 ? ? ? ? ? ? ? 1.388 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG F . ? ASN C 95 ? NAG F 1 ? 1_555 ASN B 95 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 NAG G . ? ASN C 135 ? NAG G 1 ? 1_555 ASN B 135 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 3 CYS B 259 ? CYS C 4 ? CYS A 259 ? 1_555 CYS B 4 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS C 20 ? CYS C 39 ? CYS B 20 ? 1_555 CYS B 39 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS C 63 ? CYS C 80 ? CYS B 63 ? 1_555 CYS B 80 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS C 151 ? CYS C 164 ? CYS B 151 ? 1_555 CYS B 164 ? 1_555 SG SG . . . None 'Disulfide bridge' 7 CYS C 190 ? CYS C 207 ? CYS B 190 ? 1_555 CYS B 207 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 2 ? C ? 2 ? D ? 5 ? E ? 2 ? F ? 2 ? G ? 2 ? H ? 2 ? I ? 4 ? J ? 2 ? K ? 2 ? L ? 2 ? M ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel E 1 2 ? anti-parallel F 1 2 ? anti-parallel G 1 2 ? anti-parallel H 1 2 ? anti-parallel I 1 2 ? anti-parallel I 2 3 ? anti-parallel I 3 4 ? anti-parallel J 1 2 ? anti-parallel K 1 2 ? anti-parallel L 1 2 ? anti-parallel M 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE B 8 ? THR B 12 ? ILE A 8 THR A 12 A 2 PHE B 57 ? SER B 63 ? PHE A 57 SER A 63 A 3 SER B 69 ? ASP B 75 ? SER A 69 ASP A 75 A 4 VAL B 81 ? ALA B 86 ? VAL A 81 ALA A 86 A 5 SER B 89 ? PHE B 92 ? SER A 89 PHE A 92 A 6 ASN B 113 ? THR B 116 ? ASN A 113 THR A 116 B 1 VAL B 38 ? ARG B 39 ? VAL A 38 ARG A 39 B 2 ILE B 42 ? PRO B 43 ? ILE A 42 PRO A 43 C 1 ALA B 225 ? GLN B 233 ? ALA A 225 GLN A 233 C 2 LYS B 239 ? ASP B 244 ? LYS A 239 ASP A 244 D 1 ILE C 10 ? VAL C 11 ? ILE B 10 VAL B 11 D 2 TRP C 49 ? LEU C 51 ? TRP B 49 LEU B 51 D 3 ILE C 57 ? SER C 59 ? ILE B 57 SER B 59 D 4 LYS C 62 ? THR C 66 ? LYS B 62 THR B 66 D 5 VAL C 75 ? TYR C 78 ? VAL B 75 TYR B 78 E 1 ILE C 13 ? VAL C 14 ? ILE B 13 VAL B 14 E 2 LEU C 132 ? PRO C 133 ? LEU B 132 PRO B 133 F 1 CYS C 20 ? VAL C 23 ? CYS B 20 VAL B 23 F 2 ILE C 34 ? TRP C 37 ? ILE B 34 TRP B 37 G 1 GLN C 91 ? ILE C 92 ? GLN B 91 ILE B 92 G 2 ILE C 98 ? ILE C 99 ? ILE B 98 ILE B 99 H 1 LEU C 105 ? ALA C 108 ? LEU B 105 ALA B 108 H 2 THR C 119 ? THR C 122 ? THR B 119 THR B 122 I 1 ILE C 181 ? PRO C 183 ? ILE B 181 PRO B 183 I 2 GLN C 172 ? LEU C 175 ? GLN B 172 LEU B 175 I 3 PHE C 140 ? VAL C 145 ? PHE B 140 VAL B 145 I 4 LEU C 259 ? LEU C 261 ? LEU B 259 LEU B 261 J 1 CYS C 151 ? ASN C 155 ? CYS B 151 ASN B 155 J 2 GLN C 158 ? GLU C 162 ? GLN B 158 GLU B 162 K 1 ASN C 189 ? THR C 192 ? ASN B 189 THR B 192 K 2 LYS C 203 ? SER C 206 ? LYS B 203 SER B 206 L 1 MET C 217 ? PHE C 218 ? MET B 217 PHE B 218 L 2 ILE C 224 ? LEU C 225 ? ILE B 224 LEU B 225 M 1 VAL C 232 ? VAL C 235 ? VAL B 232 VAL B 235 M 2 ILE C 245 ? TYR C 248 ? ILE B 245 TYR B 248 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE B 9 ? N ILE A 9 O GLU B 61 ? O GLU A 61 A 2 3 N VAL B 60 ? N VAL A 60 O LEU B 72 ? O LEU A 72 A 3 4 N THR B 71 ? N THR A 71 O ARG B 85 ? O ARG A 85 A 4 5 N TYR B 84 ? N TYR A 84 O TYR B 91 ? O TYR A 91 A 5 6 N ALA B 90 ? N ALA A 90 O TYR B 115 ? O TYR A 115 B 1 2 N ARG B 39 ? N ARG A 39 O ILE B 42 ? O ILE A 42 C 1 2 N PHE B 226 ? N PHE A 226 O TYR B 243 ? O TYR A 243 D 1 2 N VAL C 11 ? N VAL B 11 O TRP C 49 ? O TRP B 49 D 2 3 N THR C 50 ? N THR B 50 O ARG C 58 ? O ARG B 58 D 3 4 N ILE C 57 ? N ILE B 57 O LEU C 64 ? O LEU B 64 D 4 5 N THR C 65 ? N THR B 65 O MET C 76 ? O MET B 76 E 1 2 N VAL C 14 ? N VAL B 14 O LEU C 132 ? O LEU B 132 F 1 2 N ASP C 22 ? N ASP B 22 O GLN C 35 ? O GLN B 35 G 1 2 N GLN C 91 ? N GLN B 91 O ILE C 99 ? O ILE B 99 H 1 2 N ALA C 108 ? N ALA B 108 O THR C 119 ? O THR B 119 I 1 2 O ARG C 182 ? O ARG B 182 N ALA C 174 ? N ALA B 174 I 2 3 O TRP C 173 ? O TRP B 173 N THR C 142 ? N THR B 142 I 3 4 N THR C 143 ? N THR B 143 O LEU C 261 ? O LEU B 261 J 1 2 N GLN C 153 ? N GLN B 153 O TRP C 160 ? O TRP B 160 K 1 2 N THR C 192 ? N THR B 192 O LYS C 203 ? O LYS B 203 L 1 2 N MET C 217 ? N MET B 217 O LEU C 225 ? O LEU B 225 M 1 2 N ASP C 234 ? N ASP B 234 O ILE C 246 ? O ILE B 246 # _pdbx_entry_details.entry_id 3RTJ _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 N9 _pdbx_validate_rmsd_angle.auth_asym_id_1 D _pdbx_validate_rmsd_angle.auth_comp_id_1 A _pdbx_validate_rmsd_angle.auth_seq_id_1 701 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C1'" _pdbx_validate_rmsd_angle.auth_asym_id_2 D _pdbx_validate_rmsd_angle.auth_comp_id_2 A _pdbx_validate_rmsd_angle.auth_seq_id_2 701 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 "C2'" _pdbx_validate_rmsd_angle.auth_asym_id_3 D _pdbx_validate_rmsd_angle.auth_comp_id_3 A _pdbx_validate_rmsd_angle.auth_seq_id_3 701 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.50 _pdbx_validate_rmsd_angle.angle_target_value 114.00 _pdbx_validate_rmsd_angle.angle_deviation 9.50 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 14 ? ? -60.49 -77.79 2 1 PRO A 46 ? ? -49.92 151.29 3 1 ILE A 53 ? ? -45.84 -6.04 4 1 ASN A 64 ? ? -112.58 -169.86 5 1 ALA A 66 ? ? -69.82 5.86 6 1 VAL A 111 ? ? -26.03 140.05 7 1 ASN A 122 ? ? -42.72 151.91 8 1 ASP B 2 ? ? 64.92 -164.05 9 1 ARG B 16 ? ? -37.63 130.40 10 1 ASN B 17 ? ? 56.71 18.78 11 1 ARG B 24 ? ? -39.41 129.32 12 1 ASP B 25 ? ? 49.39 24.75 13 1 ASN B 30 ? ? -52.72 109.12 14 1 ASN B 42 ? ? -178.12 -155.38 15 1 ASP B 44 ? ? -55.93 106.34 16 1 ALA B 45 ? ? -53.20 -9.01 17 1 ASN B 55 ? ? 86.23 27.74 18 1 TYR B 69 ? ? -103.95 47.94 19 1 PRO B 71 ? ? -56.85 103.08 20 1 THR B 85 ? ? -46.80 -71.43 21 1 ASP B 86 ? ? -72.19 25.36 22 1 ASN B 95 ? ? -99.36 38.92 23 1 ARG B 102 ? ? 145.39 -32.82 24 1 THR B 110 ? ? -73.74 35.25 25 1 SER B 111 ? ? -175.49 134.74 26 1 ILE B 124 ? ? -140.06 23.05 27 1 TYR B 125 ? ? 39.81 57.48 28 1 LEU B 147 ? ? -33.89 131.10 29 1 TYR B 148 ? ? 59.73 16.98 30 1 SER B 156 ? ? 70.03 -109.77 31 1 SER B 166 ? ? -63.15 42.99 32 1 GLU B 167 ? ? -176.27 -25.32 33 1 LYS B 168 ? ? -37.73 173.89 34 1 ALA B 169 ? ? -47.84 66.12 35 1 GLU B 170 ? ? 47.20 93.45 36 1 ARG B 187 ? ? -63.61 1.09 37 1 ARG B 198 ? ? -47.90 19.27 38 1 GLU B 199 ? ? -177.87 14.03 39 1 SER B 238 ? ? 26.87 39.46 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id A _pdbx_validate_planes.auth_asym_id D _pdbx_validate_planes.auth_seq_id 701 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.069 _pdbx_validate_planes.type 'SIDE CHAIN' # _pdbx_molecule_features.prd_id PRD_900004 _pdbx_molecule_features.name beta-lactose _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class Nutrient _pdbx_molecule_features.details oligosaccharide # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_900004 D 2 PRD_900004 E # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 C ASN 95 B ASN 95 ? ASN 'GLYCOSYLATION SITE' 2 C ASN 135 B ASN 135 ? ASN 'GLYCOSYLATION SITE' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ILE 1 ? B ILE 1 2 1 Y 1 A PHE 2 ? B PHE 2 3 1 Y 1 A PRO 3 ? B PRO 3 4 1 Y 1 A LYS 4 ? B LYS 4 5 1 Y 1 A PRO 263 ? B PRO 263 6 1 Y 1 A SER 264 ? B SER 264 7 1 Y 1 A SER 265 ? B SER 265 8 1 Y 1 A GLN 266 ? B GLN 266 9 1 Y 1 A PHE 267 ? B PHE 267 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 BGC C2 C N R 111 BGC C3 C N S 112 BGC C4 C N S 113 BGC C5 C N R 114 BGC C6 C N N 115 BGC C1 C N R 116 BGC O1 O N N 117 BGC O2 O N N 118 BGC O3 O N N 119 BGC O4 O N N 120 BGC O5 O N N 121 BGC O6 O N N 122 BGC H2 H N N 123 BGC H3 H N N 124 BGC H4 H N N 125 BGC H5 H N N 126 BGC H61 H N N 127 BGC H62 H N N 128 BGC H1 H N N 129 BGC HO1 H N N 130 BGC HO2 H N N 131 BGC HO3 H N N 132 BGC HO4 H N N 133 BGC HO6 H N N 134 CYS N N N N 135 CYS CA C N R 136 CYS C C N N 137 CYS O O N N 138 CYS CB C N N 139 CYS SG S N N 140 CYS OXT O N N 141 CYS H H N N 142 CYS H2 H N N 143 CYS HA H N N 144 CYS HB2 H N N 145 CYS HB3 H N N 146 CYS HG H N N 147 CYS HXT H N N 148 G OP3 O N N 149 G P P N N 150 G OP1 O N N 151 G OP2 O N N 152 G "O5'" O N N 153 G "C5'" C N N 154 G "C4'" C N R 155 G "O4'" O N N 156 G "C3'" C N S 157 G "O3'" O N N 158 G "C2'" C N R 159 G "O2'" O N N 160 G "C1'" C N R 161 G N9 N Y N 162 G C8 C Y N 163 G N7 N Y N 164 G C5 C Y N 165 G C6 C N N 166 G O6 O N N 167 G N1 N N N 168 G C2 C N N 169 G N2 N N N 170 G N3 N N N 171 G C4 C Y N 172 G HOP3 H N N 173 G HOP2 H N N 174 G "H5'" H N N 175 G "H5''" H N N 176 G "H4'" H N N 177 G "H3'" H N N 178 G "HO3'" H N N 179 G "H2'" H N N 180 G "HO2'" H N N 181 G "H1'" H N N 182 G H8 H N N 183 G H1 H N N 184 G H21 H N N 185 G H22 H N N 186 GAL C1 C N R 187 GAL C2 C N R 188 GAL C3 C N S 189 GAL C4 C N R 190 GAL C5 C N R 191 GAL C6 C N N 192 GAL O1 O N N 193 GAL O2 O N N 194 GAL O3 O N N 195 GAL O4 O N N 196 GAL O5 O N N 197 GAL O6 O N N 198 GAL H1 H N N 199 GAL H2 H N N 200 GAL H3 H N N 201 GAL H4 H N N 202 GAL H5 H N N 203 GAL H61 H N N 204 GAL H62 H N N 205 GAL HO1 H N N 206 GAL HO2 H N N 207 GAL HO3 H N N 208 GAL HO4 H N N 209 GAL HO6 H N N 210 GLN N N N N 211 GLN CA C N S 212 GLN C C N N 213 GLN O O N N 214 GLN CB C N N 215 GLN CG C N N 216 GLN CD C N N 217 GLN OE1 O N N 218 GLN NE2 N N N 219 GLN OXT O N N 220 GLN H H N N 221 GLN H2 H N N 222 GLN HA H N N 223 GLN HB2 H N N 224 GLN HB3 H N N 225 GLN HG2 H N N 226 GLN HG3 H N N 227 GLN HE21 H N N 228 GLN HE22 H N N 229 GLN HXT H N N 230 GLU N N N N 231 GLU CA C N S 232 GLU C C N N 233 GLU O O N N 234 GLU CB C N N 235 GLU CG C N N 236 GLU CD C N N 237 GLU OE1 O N N 238 GLU OE2 O N N 239 GLU OXT O N N 240 GLU H H N N 241 GLU H2 H N N 242 GLU HA H N N 243 GLU HB2 H N N 244 GLU HB3 H N N 245 GLU HG2 H N N 246 GLU HG3 H N N 247 GLU HE2 H N N 248 GLU HXT H N N 249 GLY N N N N 250 GLY CA C N N 251 GLY C C N N 252 GLY O O N N 253 GLY OXT O N N 254 GLY H H N N 255 GLY H2 H N N 256 GLY HA2 H N N 257 GLY HA3 H N N 258 GLY HXT H N N 259 HIS N N N N 260 HIS CA C N S 261 HIS C C N N 262 HIS O O N N 263 HIS CB C N N 264 HIS CG C Y N 265 HIS ND1 N Y N 266 HIS CD2 C Y N 267 HIS CE1 C Y N 268 HIS NE2 N Y N 269 HIS OXT O N N 270 HIS H H N N 271 HIS H2 H N N 272 HIS HA H N N 273 HIS HB2 H N N 274 HIS HB3 H N N 275 HIS HD1 H N N 276 HIS HD2 H N N 277 HIS HE1 H N N 278 HIS HE2 H N N 279 HIS HXT H N N 280 ILE N N N N 281 ILE CA C N S 282 ILE C C N N 283 ILE O O N N 284 ILE CB C N S 285 ILE CG1 C N N 286 ILE CG2 C N N 287 ILE CD1 C N N 288 ILE OXT O N N 289 ILE H H N N 290 ILE H2 H N N 291 ILE HA H N N 292 ILE HB H N N 293 ILE HG12 H N N 294 ILE HG13 H N N 295 ILE HG21 H N N 296 ILE HG22 H N N 297 ILE HG23 H N N 298 ILE HD11 H N N 299 ILE HD12 H N N 300 ILE HD13 H N N 301 ILE HXT H N N 302 LEU N N N N 303 LEU CA C N S 304 LEU C C N N 305 LEU O O N N 306 LEU CB C N N 307 LEU CG C N N 308 LEU CD1 C N N 309 LEU CD2 C N N 310 LEU OXT O N N 311 LEU H H N N 312 LEU H2 H N N 313 LEU HA H N N 314 LEU HB2 H N N 315 LEU HB3 H N N 316 LEU HG H N N 317 LEU HD11 H N N 318 LEU HD12 H N N 319 LEU HD13 H N N 320 LEU HD21 H N N 321 LEU HD22 H N N 322 LEU HD23 H N N 323 LEU HXT H N N 324 LYS N N N N 325 LYS CA C N S 326 LYS C C N N 327 LYS O O N N 328 LYS CB C N N 329 LYS CG C N N 330 LYS CD C N N 331 LYS CE C N N 332 LYS NZ N N N 333 LYS OXT O N N 334 LYS H H N N 335 LYS H2 H N N 336 LYS HA H N N 337 LYS HB2 H N N 338 LYS HB3 H N N 339 LYS HG2 H N N 340 LYS HG3 H N N 341 LYS HD2 H N N 342 LYS HD3 H N N 343 LYS HE2 H N N 344 LYS HE3 H N N 345 LYS HZ1 H N N 346 LYS HZ2 H N N 347 LYS HZ3 H N N 348 LYS HXT H N N 349 MET N N N N 350 MET CA C N S 351 MET C C N N 352 MET O O N N 353 MET CB C N N 354 MET CG C N N 355 MET SD S N N 356 MET CE C N N 357 MET OXT O N N 358 MET H H N N 359 MET H2 H N N 360 MET HA H N N 361 MET HB2 H N N 362 MET HB3 H N N 363 MET HG2 H N N 364 MET HG3 H N N 365 MET HE1 H N N 366 MET HE2 H N N 367 MET HE3 H N N 368 MET HXT H N N 369 NAG C1 C N R 370 NAG C2 C N R 371 NAG C3 C N R 372 NAG C4 C N S 373 NAG C5 C N R 374 NAG C6 C N N 375 NAG C7 C N N 376 NAG C8 C N N 377 NAG N2 N N N 378 NAG O1 O N N 379 NAG O3 O N N 380 NAG O4 O N N 381 NAG O5 O N N 382 NAG O6 O N N 383 NAG O7 O N N 384 NAG H1 H N N 385 NAG H2 H N N 386 NAG H3 H N N 387 NAG H4 H N N 388 NAG H5 H N N 389 NAG H61 H N N 390 NAG H62 H N N 391 NAG H81 H N N 392 NAG H82 H N N 393 NAG H83 H N N 394 NAG HN2 H N N 395 NAG HO1 H N N 396 NAG HO3 H N N 397 NAG HO4 H N N 398 NAG HO6 H N N 399 PHE N N N N 400 PHE CA C N S 401 PHE C C N N 402 PHE O O N N 403 PHE CB C N N 404 PHE CG C Y N 405 PHE CD1 C Y N 406 PHE CD2 C Y N 407 PHE CE1 C Y N 408 PHE CE2 C Y N 409 PHE CZ C Y N 410 PHE OXT O N N 411 PHE H H N N 412 PHE H2 H N N 413 PHE HA H N N 414 PHE HB2 H N N 415 PHE HB3 H N N 416 PHE HD1 H N N 417 PHE HD2 H N N 418 PHE HE1 H N N 419 PHE HE2 H N N 420 PHE HZ H N N 421 PHE HXT H N N 422 PRO N N N N 423 PRO CA C N S 424 PRO C C N N 425 PRO O O N N 426 PRO CB C N N 427 PRO CG C N N 428 PRO CD C N N 429 PRO OXT O N N 430 PRO H H N N 431 PRO HA H N N 432 PRO HB2 H N N 433 PRO HB3 H N N 434 PRO HG2 H N N 435 PRO HG3 H N N 436 PRO HD2 H N N 437 PRO HD3 H N N 438 PRO HXT H N N 439 SER N N N N 440 SER CA C N S 441 SER C C N N 442 SER O O N N 443 SER CB C N N 444 SER OG O N N 445 SER OXT O N N 446 SER H H N N 447 SER H2 H N N 448 SER HA H N N 449 SER HB2 H N N 450 SER HB3 H N N 451 SER HG H N N 452 SER HXT H N N 453 THR N N N N 454 THR CA C N S 455 THR C C N N 456 THR O O N N 457 THR CB C N R 458 THR OG1 O N N 459 THR CG2 C N N 460 THR OXT O N N 461 THR H H N N 462 THR H2 H N N 463 THR HA H N N 464 THR HB H N N 465 THR HG1 H N N 466 THR HG21 H N N 467 THR HG22 H N N 468 THR HG23 H N N 469 THR HXT H N N 470 TRP N N N N 471 TRP CA C N S 472 TRP C C N N 473 TRP O O N N 474 TRP CB C N N 475 TRP CG C Y N 476 TRP CD1 C Y N 477 TRP CD2 C Y N 478 TRP NE1 N Y N 479 TRP CE2 C Y N 480 TRP CE3 C Y N 481 TRP CZ2 C Y N 482 TRP CZ3 C Y N 483 TRP CH2 C Y N 484 TRP OXT O N N 485 TRP H H N N 486 TRP H2 H N N 487 TRP HA H N N 488 TRP HB2 H N N 489 TRP HB3 H N N 490 TRP HD1 H N N 491 TRP HE1 H N N 492 TRP HE3 H N N 493 TRP HZ2 H N N 494 TRP HZ3 H N N 495 TRP HH2 H N N 496 TRP HXT H N N 497 TYR N N N N 498 TYR CA C N S 499 TYR C C N N 500 TYR O O N N 501 TYR CB C N N 502 TYR CG C Y N 503 TYR CD1 C Y N 504 TYR CD2 C Y N 505 TYR CE1 C Y N 506 TYR CE2 C Y N 507 TYR CZ C Y N 508 TYR OH O N N 509 TYR OXT O N N 510 TYR H H N N 511 TYR H2 H N N 512 TYR HA H N N 513 TYR HB2 H N N 514 TYR HB3 H N N 515 TYR HD1 H N N 516 TYR HD2 H N N 517 TYR HE1 H N N 518 TYR HE2 H N N 519 TYR HH H N N 520 TYR HXT H N N 521 VAL N N N N 522 VAL CA C N S 523 VAL C C N N 524 VAL O O N N 525 VAL CB C N N 526 VAL CG1 C N N 527 VAL CG2 C N N 528 VAL OXT O N N 529 VAL H H N N 530 VAL H2 H N N 531 VAL HA H N N 532 VAL HB H N N 533 VAL HG11 H N N 534 VAL HG12 H N N 535 VAL HG13 H N N 536 VAL HG21 H N N 537 VAL HG22 H N N 538 VAL HG23 H N N 539 VAL HXT H N N 540 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 BGC C2 C3 sing N N 109 BGC C2 C1 sing N N 110 BGC C2 O2 sing N N 111 BGC C2 H2 sing N N 112 BGC C3 C4 sing N N 113 BGC C3 O3 sing N N 114 BGC C3 H3 sing N N 115 BGC C4 C5 sing N N 116 BGC C4 O4 sing N N 117 BGC C4 H4 sing N N 118 BGC C5 C6 sing N N 119 BGC C5 O5 sing N N 120 BGC C5 H5 sing N N 121 BGC C6 O6 sing N N 122 BGC C6 H61 sing N N 123 BGC C6 H62 sing N N 124 BGC C1 O1 sing N N 125 BGC C1 O5 sing N N 126 BGC C1 H1 sing N N 127 BGC O1 HO1 sing N N 128 BGC O2 HO2 sing N N 129 BGC O3 HO3 sing N N 130 BGC O4 HO4 sing N N 131 BGC O6 HO6 sing N N 132 CYS N CA sing N N 133 CYS N H sing N N 134 CYS N H2 sing N N 135 CYS CA C sing N N 136 CYS CA CB sing N N 137 CYS CA HA sing N N 138 CYS C O doub N N 139 CYS C OXT sing N N 140 CYS CB SG sing N N 141 CYS CB HB2 sing N N 142 CYS CB HB3 sing N N 143 CYS SG HG sing N N 144 CYS OXT HXT sing N N 145 G OP3 P sing N N 146 G OP3 HOP3 sing N N 147 G P OP1 doub N N 148 G P OP2 sing N N 149 G P "O5'" sing N N 150 G OP2 HOP2 sing N N 151 G "O5'" "C5'" sing N N 152 G "C5'" "C4'" sing N N 153 G "C5'" "H5'" sing N N 154 G "C5'" "H5''" sing N N 155 G "C4'" "O4'" sing N N 156 G "C4'" "C3'" sing N N 157 G "C4'" "H4'" sing N N 158 G "O4'" "C1'" sing N N 159 G "C3'" "O3'" sing N N 160 G "C3'" "C2'" sing N N 161 G "C3'" "H3'" sing N N 162 G "O3'" "HO3'" sing N N 163 G "C2'" "O2'" sing N N 164 G "C2'" "C1'" sing N N 165 G "C2'" "H2'" sing N N 166 G "O2'" "HO2'" sing N N 167 G "C1'" N9 sing N N 168 G "C1'" "H1'" sing N N 169 G N9 C8 sing Y N 170 G N9 C4 sing Y N 171 G C8 N7 doub Y N 172 G C8 H8 sing N N 173 G N7 C5 sing Y N 174 G C5 C6 sing N N 175 G C5 C4 doub Y N 176 G C6 O6 doub N N 177 G C6 N1 sing N N 178 G N1 C2 sing N N 179 G N1 H1 sing N N 180 G C2 N2 sing N N 181 G C2 N3 doub N N 182 G N2 H21 sing N N 183 G N2 H22 sing N N 184 G N3 C4 sing N N 185 GAL C1 C2 sing N N 186 GAL C1 O1 sing N N 187 GAL C1 O5 sing N N 188 GAL C1 H1 sing N N 189 GAL C2 C3 sing N N 190 GAL C2 O2 sing N N 191 GAL C2 H2 sing N N 192 GAL C3 C4 sing N N 193 GAL C3 O3 sing N N 194 GAL C3 H3 sing N N 195 GAL C4 C5 sing N N 196 GAL C4 O4 sing N N 197 GAL C4 H4 sing N N 198 GAL C5 C6 sing N N 199 GAL C5 O5 sing N N 200 GAL C5 H5 sing N N 201 GAL C6 O6 sing N N 202 GAL C6 H61 sing N N 203 GAL C6 H62 sing N N 204 GAL O1 HO1 sing N N 205 GAL O2 HO2 sing N N 206 GAL O3 HO3 sing N N 207 GAL O4 HO4 sing N N 208 GAL O6 HO6 sing N N 209 GLN N CA sing N N 210 GLN N H sing N N 211 GLN N H2 sing N N 212 GLN CA C sing N N 213 GLN CA CB sing N N 214 GLN CA HA sing N N 215 GLN C O doub N N 216 GLN C OXT sing N N 217 GLN CB CG sing N N 218 GLN CB HB2 sing N N 219 GLN CB HB3 sing N N 220 GLN CG CD sing N N 221 GLN CG HG2 sing N N 222 GLN CG HG3 sing N N 223 GLN CD OE1 doub N N 224 GLN CD NE2 sing N N 225 GLN NE2 HE21 sing N N 226 GLN NE2 HE22 sing N N 227 GLN OXT HXT sing N N 228 GLU N CA sing N N 229 GLU N H sing N N 230 GLU N H2 sing N N 231 GLU CA C sing N N 232 GLU CA CB sing N N 233 GLU CA HA sing N N 234 GLU C O doub N N 235 GLU C OXT sing N N 236 GLU CB CG sing N N 237 GLU CB HB2 sing N N 238 GLU CB HB3 sing N N 239 GLU CG CD sing N N 240 GLU CG HG2 sing N N 241 GLU CG HG3 sing N N 242 GLU CD OE1 doub N N 243 GLU CD OE2 sing N N 244 GLU OE2 HE2 sing N N 245 GLU OXT HXT sing N N 246 GLY N CA sing N N 247 GLY N H sing N N 248 GLY N H2 sing N N 249 GLY CA C sing N N 250 GLY CA HA2 sing N N 251 GLY CA HA3 sing N N 252 GLY C O doub N N 253 GLY C OXT sing N N 254 GLY OXT HXT sing N N 255 HIS N CA sing N N 256 HIS N H sing N N 257 HIS N H2 sing N N 258 HIS CA C sing N N 259 HIS CA CB sing N N 260 HIS CA HA sing N N 261 HIS C O doub N N 262 HIS C OXT sing N N 263 HIS CB CG sing N N 264 HIS CB HB2 sing N N 265 HIS CB HB3 sing N N 266 HIS CG ND1 sing Y N 267 HIS CG CD2 doub Y N 268 HIS ND1 CE1 doub Y N 269 HIS ND1 HD1 sing N N 270 HIS CD2 NE2 sing Y N 271 HIS CD2 HD2 sing N N 272 HIS CE1 NE2 sing Y N 273 HIS CE1 HE1 sing N N 274 HIS NE2 HE2 sing N N 275 HIS OXT HXT sing N N 276 ILE N CA sing N N 277 ILE N H sing N N 278 ILE N H2 sing N N 279 ILE CA C sing N N 280 ILE CA CB sing N N 281 ILE CA HA sing N N 282 ILE C O doub N N 283 ILE C OXT sing N N 284 ILE CB CG1 sing N N 285 ILE CB CG2 sing N N 286 ILE CB HB sing N N 287 ILE CG1 CD1 sing N N 288 ILE CG1 HG12 sing N N 289 ILE CG1 HG13 sing N N 290 ILE CG2 HG21 sing N N 291 ILE CG2 HG22 sing N N 292 ILE CG2 HG23 sing N N 293 ILE CD1 HD11 sing N N 294 ILE CD1 HD12 sing N N 295 ILE CD1 HD13 sing N N 296 ILE OXT HXT sing N N 297 LEU N CA sing N N 298 LEU N H sing N N 299 LEU N H2 sing N N 300 LEU CA C sing N N 301 LEU CA CB sing N N 302 LEU CA HA sing N N 303 LEU C O doub N N 304 LEU C OXT sing N N 305 LEU CB CG sing N N 306 LEU CB HB2 sing N N 307 LEU CB HB3 sing N N 308 LEU CG CD1 sing N N 309 LEU CG CD2 sing N N 310 LEU CG HG sing N N 311 LEU CD1 HD11 sing N N 312 LEU CD1 HD12 sing N N 313 LEU CD1 HD13 sing N N 314 LEU CD2 HD21 sing N N 315 LEU CD2 HD22 sing N N 316 LEU CD2 HD23 sing N N 317 LEU OXT HXT sing N N 318 LYS N CA sing N N 319 LYS N H sing N N 320 LYS N H2 sing N N 321 LYS CA C sing N N 322 LYS CA CB sing N N 323 LYS CA HA sing N N 324 LYS C O doub N N 325 LYS C OXT sing N N 326 LYS CB CG sing N N 327 LYS CB HB2 sing N N 328 LYS CB HB3 sing N N 329 LYS CG CD sing N N 330 LYS CG HG2 sing N N 331 LYS CG HG3 sing N N 332 LYS CD CE sing N N 333 LYS CD HD2 sing N N 334 LYS CD HD3 sing N N 335 LYS CE NZ sing N N 336 LYS CE HE2 sing N N 337 LYS CE HE3 sing N N 338 LYS NZ HZ1 sing N N 339 LYS NZ HZ2 sing N N 340 LYS NZ HZ3 sing N N 341 LYS OXT HXT sing N N 342 MET N CA sing N N 343 MET N H sing N N 344 MET N H2 sing N N 345 MET CA C sing N N 346 MET CA CB sing N N 347 MET CA HA sing N N 348 MET C O doub N N 349 MET C OXT sing N N 350 MET CB CG sing N N 351 MET CB HB2 sing N N 352 MET CB HB3 sing N N 353 MET CG SD sing N N 354 MET CG HG2 sing N N 355 MET CG HG3 sing N N 356 MET SD CE sing N N 357 MET CE HE1 sing N N 358 MET CE HE2 sing N N 359 MET CE HE3 sing N N 360 MET OXT HXT sing N N 361 NAG C1 C2 sing N N 362 NAG C1 O1 sing N N 363 NAG C1 O5 sing N N 364 NAG C1 H1 sing N N 365 NAG C2 C3 sing N N 366 NAG C2 N2 sing N N 367 NAG C2 H2 sing N N 368 NAG C3 C4 sing N N 369 NAG C3 O3 sing N N 370 NAG C3 H3 sing N N 371 NAG C4 C5 sing N N 372 NAG C4 O4 sing N N 373 NAG C4 H4 sing N N 374 NAG C5 C6 sing N N 375 NAG C5 O5 sing N N 376 NAG C5 H5 sing N N 377 NAG C6 O6 sing N N 378 NAG C6 H61 sing N N 379 NAG C6 H62 sing N N 380 NAG C7 C8 sing N N 381 NAG C7 N2 sing N N 382 NAG C7 O7 doub N N 383 NAG C8 H81 sing N N 384 NAG C8 H82 sing N N 385 NAG C8 H83 sing N N 386 NAG N2 HN2 sing N N 387 NAG O1 HO1 sing N N 388 NAG O3 HO3 sing N N 389 NAG O4 HO4 sing N N 390 NAG O6 HO6 sing N N 391 PHE N CA sing N N 392 PHE N H sing N N 393 PHE N H2 sing N N 394 PHE CA C sing N N 395 PHE CA CB sing N N 396 PHE CA HA sing N N 397 PHE C O doub N N 398 PHE C OXT sing N N 399 PHE CB CG sing N N 400 PHE CB HB2 sing N N 401 PHE CB HB3 sing N N 402 PHE CG CD1 doub Y N 403 PHE CG CD2 sing Y N 404 PHE CD1 CE1 sing Y N 405 PHE CD1 HD1 sing N N 406 PHE CD2 CE2 doub Y N 407 PHE CD2 HD2 sing N N 408 PHE CE1 CZ doub Y N 409 PHE CE1 HE1 sing N N 410 PHE CE2 CZ sing Y N 411 PHE CE2 HE2 sing N N 412 PHE CZ HZ sing N N 413 PHE OXT HXT sing N N 414 PRO N CA sing N N 415 PRO N CD sing N N 416 PRO N H sing N N 417 PRO CA C sing N N 418 PRO CA CB sing N N 419 PRO CA HA sing N N 420 PRO C O doub N N 421 PRO C OXT sing N N 422 PRO CB CG sing N N 423 PRO CB HB2 sing N N 424 PRO CB HB3 sing N N 425 PRO CG CD sing N N 426 PRO CG HG2 sing N N 427 PRO CG HG3 sing N N 428 PRO CD HD2 sing N N 429 PRO CD HD3 sing N N 430 PRO OXT HXT sing N N 431 SER N CA sing N N 432 SER N H sing N N 433 SER N H2 sing N N 434 SER CA C sing N N 435 SER CA CB sing N N 436 SER CA HA sing N N 437 SER C O doub N N 438 SER C OXT sing N N 439 SER CB OG sing N N 440 SER CB HB2 sing N N 441 SER CB HB3 sing N N 442 SER OG HG sing N N 443 SER OXT HXT sing N N 444 THR N CA sing N N 445 THR N H sing N N 446 THR N H2 sing N N 447 THR CA C sing N N 448 THR CA CB sing N N 449 THR CA HA sing N N 450 THR C O doub N N 451 THR C OXT sing N N 452 THR CB OG1 sing N N 453 THR CB CG2 sing N N 454 THR CB HB sing N N 455 THR OG1 HG1 sing N N 456 THR CG2 HG21 sing N N 457 THR CG2 HG22 sing N N 458 THR CG2 HG23 sing N N 459 THR OXT HXT sing N N 460 TRP N CA sing N N 461 TRP N H sing N N 462 TRP N H2 sing N N 463 TRP CA C sing N N 464 TRP CA CB sing N N 465 TRP CA HA sing N N 466 TRP C O doub N N 467 TRP C OXT sing N N 468 TRP CB CG sing N N 469 TRP CB HB2 sing N N 470 TRP CB HB3 sing N N 471 TRP CG CD1 doub Y N 472 TRP CG CD2 sing Y N 473 TRP CD1 NE1 sing Y N 474 TRP CD1 HD1 sing N N 475 TRP CD2 CE2 doub Y N 476 TRP CD2 CE3 sing Y N 477 TRP NE1 CE2 sing Y N 478 TRP NE1 HE1 sing N N 479 TRP CE2 CZ2 sing Y N 480 TRP CE3 CZ3 doub Y N 481 TRP CE3 HE3 sing N N 482 TRP CZ2 CH2 doub Y N 483 TRP CZ2 HZ2 sing N N 484 TRP CZ3 CH2 sing Y N 485 TRP CZ3 HZ3 sing N N 486 TRP CH2 HH2 sing N N 487 TRP OXT HXT sing N N 488 TYR N CA sing N N 489 TYR N H sing N N 490 TYR N H2 sing N N 491 TYR CA C sing N N 492 TYR CA CB sing N N 493 TYR CA HA sing N N 494 TYR C O doub N N 495 TYR C OXT sing N N 496 TYR CB CG sing N N 497 TYR CB HB2 sing N N 498 TYR CB HB3 sing N N 499 TYR CG CD1 doub Y N 500 TYR CG CD2 sing Y N 501 TYR CD1 CE1 sing Y N 502 TYR CD1 HD1 sing N N 503 TYR CD2 CE2 doub Y N 504 TYR CD2 HD2 sing N N 505 TYR CE1 CZ doub Y N 506 TYR CE1 HE1 sing N N 507 TYR CE2 CZ sing Y N 508 TYR CE2 HE2 sing N N 509 TYR CZ OH sing N N 510 TYR OH HH sing N N 511 TYR OXT HXT sing N N 512 VAL N CA sing N N 513 VAL N H sing N N 514 VAL N H2 sing N N 515 VAL CA C sing N N 516 VAL CA CB sing N N 517 VAL CA HA sing N N 518 VAL C O doub N N 519 VAL C OXT sing N N 520 VAL CB CG1 sing N N 521 VAL CB CG2 sing N N 522 VAL CB HB sing N N 523 VAL CG1 HG11 sing N N 524 VAL CG1 HG12 sing N N 525 VAL CG1 HG13 sing N N 526 VAL CG2 HG21 sing N N 527 VAL CG2 HG22 sing N N 528 VAL CG2 HG23 sing N N 529 VAL OXT HXT sing N N 530 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 4 BGC 1 n 4 GAL 2 n 5 NAG 1 n 5 NAG 2 n # _atom_sites.entry_id 3RTJ _atom_sites.fract_transf_matrix[1][1] 0.013748 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012740 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008746 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_