data_3RUN
#
_entry.id 3RUN
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.382
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 3RUN pdb_00003run 10.2210/pdb3run/pdb
RCSB RCSB065397 ? ?
WWPDB D_1000065397 ? ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.details
_pdbx_database_related.content_type
PDB 2LZM 'Structure of bacteriophage T4 lysozyme refined at 1.7A resolution' unspecified
PDB 3RUL . unspecified
PDB 3RUM . unspecified
PDB 3VFJ . unspecified
PDB 3VFK . unspecified
#
_pdbx_database_status.entry_id 3RUN
_pdbx_database_status.status_code REL
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.recvd_initial_deposition_date 2011-05-05
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Economou, N.J.' 1
'Townsend, T.M.' 2
'Loll, P.J.' 3
#
_citation.id primary
_citation.title 'A carrier protein strategy yields the structure of dalbavancin.'
_citation.journal_abbrev J.Am.Chem.Soc.
_citation.journal_volume 134
_citation.page_first 4637
_citation.page_last 4645
_citation.year 2012
_citation.journal_id_ASTM JACSAT
_citation.country US
_citation.journal_id_ISSN 0002-7863
_citation.journal_id_CSD 0004
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 22352468
_citation.pdbx_database_id_DOI 10.1021/ja208755j
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Economou, N.J.' 1 ?
primary 'Nahoum, V.' 2 ?
primary 'Weeks, S.D.' 3 ?
primary 'Grasty, K.C.' 4 ?
primary 'Zentner, I.J.' 5 ?
primary 'Townsend, T.M.' 6 ?
primary 'Bhuiya, M.W.' 7 ?
primary 'Cocklin, S.' 8 ?
primary 'Loll, P.J.' 9 ?
#
_cell.entry_id 3RUN
_cell.length_a 60.440
_cell.length_b 60.440
_cell.length_c 96.830
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 120.00
_cell.Z_PDB 6
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 3RUN
_symmetry.space_group_name_H-M 'P 32 2 1'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 154
_symmetry.space_group_name_Hall ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer man LYSOZYME 19018.799 1 3.2.1.17 'C54T, C97A, L164A' ? ?
2 polymer nat VANCOMYCIN 1149.977 1 ? ? ? ?
3 branched man 'vancosamine-(1-2)-beta-D-glucopyranose' 323.340 1 ? ? ? ?
4 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 1 ? ? ? ?
5 non-polymer syn '(4R)-2-METHYLPENTANE-2,4-DIOL' 118.174 2 ? ? ? ?
6 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ?
7 non-polymer syn 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 122.143 1 ? ? ? ?
8 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ?
9 non-polymer syn 'ISOPROPYL ALCOHOL' 60.095 2 ? ? ? ?
10 water nat water 18.015 316 ? ? ? ?
#
_entity_name_com.entity_id 1
_entity_name_com.name 'Endolysin, Lysis protein, Muramidase'
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_target_identifier
1 'polypeptide(L)' no yes
;MNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILR
NAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDA
YKNA(CCS)K(DAL)(DAL)
;
;MNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILR
NAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDA
YKNACKAA
;
A ?
2 'polypeptide(L)' no yes '(MLU)(OMZ)N(GHP)(GHP)(OMY)(3FG)' XXNGGYX B ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET n
1 2 ASN n
1 3 ILE n
1 4 PHE n
1 5 GLU n
1 6 MET n
1 7 LEU n
1 8 ARG n
1 9 ILE n
1 10 ASP n
1 11 GLU n
1 12 GLY n
1 13 LEU n
1 14 ARG n
1 15 LEU n
1 16 LYS n
1 17 ILE n
1 18 TYR n
1 19 LYS n
1 20 ASP n
1 21 THR n
1 22 GLU n
1 23 GLY n
1 24 TYR n
1 25 TYR n
1 26 THR n
1 27 ILE n
1 28 GLY n
1 29 ILE n
1 30 GLY n
1 31 HIS n
1 32 LEU n
1 33 LEU n
1 34 THR n
1 35 LYS n
1 36 SER n
1 37 PRO n
1 38 SER n
1 39 LEU n
1 40 ASN n
1 41 ALA n
1 42 ALA n
1 43 LYS n
1 44 SER n
1 45 GLU n
1 46 LEU n
1 47 ASP n
1 48 LYS n
1 49 ALA n
1 50 ILE n
1 51 GLY n
1 52 ARG n
1 53 ASN n
1 54 THR n
1 55 ASN n
1 56 GLY n
1 57 VAL n
1 58 ILE n
1 59 THR n
1 60 LYS n
1 61 ASP n
1 62 GLU n
1 63 ALA n
1 64 GLU n
1 65 LYS n
1 66 LEU n
1 67 PHE n
1 68 ASN n
1 69 GLN n
1 70 ASP n
1 71 VAL n
1 72 ASP n
1 73 ALA n
1 74 ALA n
1 75 VAL n
1 76 ARG n
1 77 GLY n
1 78 ILE n
1 79 LEU n
1 80 ARG n
1 81 ASN n
1 82 ALA n
1 83 LYS n
1 84 LEU n
1 85 LYS n
1 86 PRO n
1 87 VAL n
1 88 TYR n
1 89 ASP n
1 90 SER n
1 91 LEU n
1 92 ASP n
1 93 ALA n
1 94 VAL n
1 95 ARG n
1 96 ARG n
1 97 ALA n
1 98 ALA n
1 99 LEU n
1 100 ILE n
1 101 ASN n
1 102 MET n
1 103 VAL n
1 104 PHE n
1 105 GLN n
1 106 MET n
1 107 GLY n
1 108 GLU n
1 109 THR n
1 110 GLY n
1 111 VAL n
1 112 ALA n
1 113 GLY n
1 114 PHE n
1 115 THR n
1 116 ASN n
1 117 SER n
1 118 LEU n
1 119 ARG n
1 120 MET n
1 121 LEU n
1 122 GLN n
1 123 GLN n
1 124 LYS n
1 125 ARG n
1 126 TRP n
1 127 ASP n
1 128 GLU n
1 129 ALA n
1 130 ALA n
1 131 VAL n
1 132 ASN n
1 133 LEU n
1 134 ALA n
1 135 LYS n
1 136 SER n
1 137 ARG n
1 138 TRP n
1 139 TYR n
1 140 ASN n
1 141 GLN n
1 142 THR n
1 143 PRO n
1 144 ASN n
1 145 ARG n
1 146 ALA n
1 147 LYS n
1 148 ARG n
1 149 VAL n
1 150 ILE n
1 151 THR n
1 152 THR n
1 153 PHE n
1 154 ARG n
1 155 THR n
1 156 GLY n
1 157 THR n
1 158 TRP n
1 159 ASP n
1 160 ALA n
1 161 TYR n
1 162 LYS n
1 163 ASN n
1 164 ALA n
1 165 CCS n
1 166 LYS n
1 167 DAL n
1 168 DAL n
2 1 MLU n
2 2 OMZ n
2 3 ASN n
2 4 GHP n
2 5 GHP n
2 6 OMY n
2 7 3FG n
#
_entity_src_gen.entity_id 1
_entity_src_gen.pdbx_src_id 1
_entity_src_gen.pdbx_alt_source_flag sample
_entity_src_gen.pdbx_seq_type ?
_entity_src_gen.pdbx_beg_seq_num ?
_entity_src_gen.pdbx_end_seq_num ?
_entity_src_gen.gene_src_common_name ?
_entity_src_gen.gene_src_genus ?
_entity_src_gen.pdbx_gene_src_gene E
_entity_src_gen.gene_src_species ?
_entity_src_gen.gene_src_strain ?
_entity_src_gen.gene_src_tissue ?
_entity_src_gen.gene_src_tissue_fraction ?
_entity_src_gen.gene_src_details ?
_entity_src_gen.pdbx_gene_src_fragment ?
_entity_src_gen.pdbx_gene_src_scientific_name 'ENTEROBACTERIA PHAGE T4'
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10665
_entity_src_gen.pdbx_gene_src_variant ?
_entity_src_gen.pdbx_gene_src_cell_line ?
_entity_src_gen.pdbx_gene_src_atcc ?
_entity_src_gen.pdbx_gene_src_organ ?
_entity_src_gen.pdbx_gene_src_organelle ?
_entity_src_gen.pdbx_gene_src_cell ?
_entity_src_gen.pdbx_gene_src_cellular_location ?
_entity_src_gen.host_org_common_name ?
_entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI'
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562
_entity_src_gen.host_org_genus ?
_entity_src_gen.pdbx_host_org_gene ?
_entity_src_gen.pdbx_host_org_organ ?
_entity_src_gen.host_org_species ?
_entity_src_gen.pdbx_host_org_tissue ?
_entity_src_gen.pdbx_host_org_tissue_fraction ?
_entity_src_gen.pdbx_host_org_strain ?
_entity_src_gen.pdbx_host_org_variant ?
_entity_src_gen.pdbx_host_org_cell_line ?
_entity_src_gen.pdbx_host_org_atcc ?
_entity_src_gen.pdbx_host_org_culture_collection ?
_entity_src_gen.pdbx_host_org_cell ?
_entity_src_gen.pdbx_host_org_organelle ?
_entity_src_gen.pdbx_host_org_cellular_location ?
_entity_src_gen.pdbx_host_org_vector_type ?
_entity_src_gen.pdbx_host_org_vector ?
_entity_src_gen.host_org_details ?
_entity_src_gen.expression_system_id ?
_entity_src_gen.plasmid_name ?
_entity_src_gen.plasmid_details ?
_entity_src_gen.pdbx_description ?
#
_entity_src_nat.entity_id 2
_entity_src_nat.pdbx_src_id 1
_entity_src_nat.pdbx_alt_source_flag sample
_entity_src_nat.pdbx_beg_seq_num ?
_entity_src_nat.pdbx_end_seq_num ?
_entity_src_nat.common_name ?
_entity_src_nat.pdbx_organism_scientific 'Streptomyces orientalis'
_entity_src_nat.pdbx_ncbi_taxonomy_id 31958
_entity_src_nat.genus ?
_entity_src_nat.species ?
_entity_src_nat.strain ?
_entity_src_nat.tissue ?
_entity_src_nat.tissue_fraction ?
_entity_src_nat.pdbx_secretion ?
_entity_src_nat.pdbx_fragment ?
_entity_src_nat.pdbx_variant ?
_entity_src_nat.pdbx_cell_line ?
_entity_src_nat.pdbx_atcc ?
_entity_src_nat.pdbx_cellular_location ?
_entity_src_nat.pdbx_organ ?
_entity_src_nat.pdbx_organelle ?
_entity_src_nat.pdbx_cell ?
_entity_src_nat.pdbx_plasmid_name ?
_entity_src_nat.pdbx_plasmid_details ?
_entity_src_nat.details ?
#
loop_
_struct_ref.id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.entity_id
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_db_isoform
1 UNP LYS_BPT4 P00720 1
;MNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNCNGVITKDEAEKLFNQDVDAAVRGILR
NAKLKPVYDSLDAVRRCALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDA
YKNL
;
1 ?
2 NOR NOR00681 NOR00681 2 ? ? ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 3RUN A 1 ? 164 ? P00720 1 ? 164 ? 1 164
2 2 3RUN B 1 ? 7 ? 3RUN 1 ? 7 ? 1 7
#
loop_
_struct_ref_seq_dif.align_id
_struct_ref_seq_dif.pdbx_pdb_id_code
_struct_ref_seq_dif.mon_id
_struct_ref_seq_dif.pdbx_pdb_strand_id
_struct_ref_seq_dif.seq_num
_struct_ref_seq_dif.pdbx_pdb_ins_code
_struct_ref_seq_dif.pdbx_seq_db_name
_struct_ref_seq_dif.pdbx_seq_db_accession_code
_struct_ref_seq_dif.db_mon_id
_struct_ref_seq_dif.pdbx_seq_db_seq_num
_struct_ref_seq_dif.details
_struct_ref_seq_dif.pdbx_auth_seq_num
_struct_ref_seq_dif.pdbx_ordinal
1 3RUN THR A 54 ? UNP P00720 CYS 54 'engineered mutation' 54 1
1 3RUN ALA A 97 ? UNP P00720 CYS 97 'engineered mutation' 97 2
1 3RUN ALA A 164 ? UNP P00720 LEU 164 'engineered mutation' 164 3
1 3RUN CCS A 165 ? UNP P00720 ? ? 'SEE REMARK 999' 165 4
1 3RUN LYS A 166 ? UNP P00720 ? ? 'SEE REMARK 999' 166 5
1 3RUN DAL A 167 ? UNP P00720 ? ? 'SEE REMARK 999' 167 6
1 3RUN DAL A 168 ? UNP P00720 ? ? 'SEE REMARK 999' 168 7
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
3FG 'L-peptide linking' . '(2S)-amino(3,5-dihydroxyphenyl)ethanoic acid' ? 'C8 H9 N O4' 183.161
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
BGC 'D-saccharide, beta linking' . beta-D-glucopyranose 'beta-D-glucose; D-glucose; glucose'
'C6 H12 O6' 180.156
CCS 'L-peptide linking' n 'CARBOXYMETHYLATED CYSTEINE' ? 'C5 H9 N O4 S' 179.194
CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453
CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158
DAL 'D-peptide linking' . D-ALANINE ? 'C3 H7 N O2' 89.093
GHP 'D-peptide linking' . '(2R)-amino(4-hydroxyphenyl)ethanoic acid' ? 'C8 H9 N O3' 167.162
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
IPA non-polymer . 'ISOPROPYL ALCOHOL' 2-PROPANOL 'C3 H8 O' 60.095
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
MLU 'D-peptide linking' . N-methyl-D-leucine ? 'C7 H15 N O2' 145.199
MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174
MRD non-polymer . '(4R)-2-METHYLPENTANE-2,4-DIOL' ? 'C6 H14 O2' 118.174
OMY 'L-peptide linking' n '(betaR)-3-chloro-beta-hydroxy-L-tyrosine' ? 'C9 H10 Cl N O4' 231.633
OMZ 'D-peptide linking' . '(betaR)-3-CHLORO-BETA-HYDROXY-D-TYROSINE' ? 'C9 H10 Cl N O4' 231.633
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
RER 'L-saccharide, alpha linking' . vancosamine
'(1R,3S,4S,5S)-3-amino-2,3,6-trideoxy-3-methyl-alpha-L-arabino-hexopyranose' 'C7 H15 N O3' 161.199
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TRS non-polymer . 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 'TRIS BUFFER' 'C4 H12 N O3 1' 122.143
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
_exptl.crystals_number 1
_exptl.entry_id 3RUN
_exptl.method 'X-RAY DIFFRACTION'
#
_exptl_crystal.id 1
_exptl_crystal.pdbx_mosaicity ?
_exptl_crystal.pdbx_mosaicity_esd ?
_exptl_crystal.density_Matthews 2.68
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_percent_sol 54.18
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.pH 8.5
_exptl_crystal_grow.temp 291
_exptl_crystal_grow.pdbx_details
'0.2M ammonium phosphate, 0.1M Tris 8.5, 35% MPD, vapor diffusion, hanging drop, temperature 291K'
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pdbx_pH_range .
#
_diffrn.id 1
_diffrn.ambient_temp 93
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector ?
_diffrn_detector.type ?
_diffrn_detector.pdbx_collection_date 2011-03-25
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.monochromator ?
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.000
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'NSLS BEAMLINE X6A'
_diffrn_source.pdbx_wavelength_list 1.000
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_site NSLS
_diffrn_source.pdbx_synchrotron_beamline X6A
#
_reflns.entry_id 3RUN
_reflns.d_resolution_high 1.400
_reflns.number_obs 77081
_reflns.pdbx_Rmerge_I_obs 0.076
_reflns.pdbx_netI_over_sigmaI 13.750
_reflns.percent_possible_obs 98.800
_reflns.B_iso_Wilson_estimate 18.614
_reflns.observed_criterion_sigma_I -3.000
_reflns.observed_criterion_sigma_F ?
_reflns.d_resolution_low 19.8
_reflns.number_all 77978
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_redundancy 5.48
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_ordinal 1
_reflns.pdbx_diffrn_id 1
#
loop_
_reflns_shell.d_res_high
_reflns_shell.d_res_low
_reflns_shell.number_measured_obs
_reflns_shell.number_measured_all
_reflns_shell.number_unique_obs
_reflns_shell.pdbx_rejects
_reflns_shell.Rmerge_I_obs
_reflns_shell.meanI_over_sigI_obs
_reflns_shell.pdbx_Rsym_value
_reflns_shell.pdbx_chi_squared
_reflns_shell.pdbx_redundancy
_reflns_shell.percent_possible_obs
_reflns_shell.pdbx_netI_over_sigmaI_obs
_reflns_shell.number_possible
_reflns_shell.number_unique_all
_reflns_shell.Rmerge_F_all
_reflns_shell.Rmerge_F_obs
_reflns_shell.Rmerge_I_all
_reflns_shell.meanI_over_sigI_all
_reflns_shell.percent_possible_all
_reflns_shell.pdbx_Rrim_I_all
_reflns_shell.pdbx_Rpim_I_all
_reflns_shell.pdbx_ordinal
_reflns_shell.pdbx_diffrn_id
1.400 1.440 19858 ? 5100 ? 0.652 2.040 ? ? ? ? ? 5816 ? ? 0.767 ? ? 87.700 0.745 ? 1 1
1.440 1.480 25898 ? 5464 ? 0.533 2.900 ? ? ? ? ? 5616 ? ? 0.565 ? ? 97.300 0.597 ? 2 1
1.480 1.520 30478 ? 5491 ? 0.456 3.820 ? ? ? ? ? 5491 ? ? 0.425 ? ? 100.000 0.504 ? 3 1
1.520 1.570 29463 ? 5286 ? 0.357 4.810 ? ? ? ? ? 5286 ? ? 0.335 ? ? 100.000 0.394 ? 4 1
1.570 1.620 28566 ? 5107 ? 0.304 5.610 ? ? ? ? ? 5108 ? ? 0.280 ? ? 100.000 0.336 ? 5 1
1.620 1.670 28005 ? 4991 ? 0.256 6.530 ? ? ? ? ? 4991 ? ? 0.237 ? ? 100.000 0.282 ? 6 1
1.670 1.740 27119 ? 4812 ? 0.209 7.940 ? ? ? ? ? 4812 ? ? 0.181 ? ? 100.000 0.230 ? 7 1
1.740 1.810 26186 ? 4632 ? 0.174 9.350 ? ? ? ? ? 4633 ? ? 0.152 ? ? 100.000 0.192 ? 8 1
1.810 1.890 25186 ? 4434 ? 0.137 11.530 ? ? ? ? ? 4435 ? ? 0.118 ? ? 100.000 0.151 ? 9 1
1.890 1.980 23855 ? 4200 ? 0.109 13.930 ? ? ? ? ? 4200 ? ? 0.093 ? ? 100.000 0.120 ? 10 1
1.980 2.090 23103 ? 4051 ? 0.085 17.620 ? ? ? ? ? 4052 ? ? 0.067 ? ? 100.000 0.094 ? 11 1
2.090 2.210 21687 ? 3789 ? 0.070 20.760 ? ? ? ? ? 3789 ? ? 0.051 ? ? 100.000 0.077 ? 12 1
2.210 2.370 20628 ? 3602 ? 0.061 23.270 ? ? ? ? ? 3602 ? ? 0.042 ? ? 100.000 0.067 ? 13 1
2.370 2.560 19098 ? 3333 ? 0.057 24.440 ? ? ? ? ? 3333 ? ? 0.038 ? ? 100.000 0.063 ? 14 1
2.560 2.800 17592 ? 3053 ? 0.051 27.380 ? ? ? ? ? 3053 ? ? 0.035 ? ? 100.000 0.056 ? 15 1
2.800 3.130 15992 ? 2775 ? 0.046 30.460 ? ? ? ? ? 2775 ? ? 0.029 ? ? 100.000 0.051 ? 16 1
3.130 3.610 14074 ? 2452 ? 0.041 34.730 ? ? ? ? ? 2452 ? ? 0.023 ? ? 100.000 0.045 ? 17 1
3.610 4.430 11829 ? 2066 ? 0.041 37.400 ? ? ? ? ? 2066 ? ? 0.021 ? ? 100.000 0.045 ? 18 1
4.430 6.260 9135 ? 1593 ? 0.041 35.990 ? ? ? ? ? 1593 ? ? 0.023 ? ? 100.000 0.045 ? 19 1
6.260 ? 4766 ? 850 ? 0.042 37.380 ? ? ? ? ? 875 ? ? 0.023 ? ? 97.100 0.047 ? 20 1
#
_refine.entry_id 3RUN
_refine.ls_d_res_high 1.4000
_refine.ls_d_res_low 19.7840
_refine.pdbx_ls_sigma_F 1.430
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.ls_percent_reflns_obs 98.8800
_refine.ls_number_reflns_obs 77081
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_cross_valid_method ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.details ?
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs 0.1491
_refine.ls_R_factor_R_work 0.1475
_refine.ls_wR_factor_R_work ?
_refine.ls_R_factor_R_free 0.1799
_refine.ls_wR_factor_R_free ?
_refine.ls_percent_reflns_R_free 5.0300
_refine.ls_number_reflns_R_free 3879
_refine.ls_R_factor_R_free_error ?
_refine.B_iso_mean ?
_refine.solvent_model_param_bsol 54.717
_refine.solvent_model_param_ksol 0.394
_refine.pdbx_isotropic_thermal_model ?
_refine.aniso_B[1][1] -0.3277
_refine.aniso_B[2][2] -0.3277
_refine.aniso_B[3][3] 0.6554
_refine.aniso_B[1][2] -0.0000
_refine.aniso_B[1][3] 0.0000
_refine.aniso_B[2][3] -0.0000
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML 0.1800
_refine.overall_SU_B ?
_refine.solvent_model_details 'FLAT BULK SOLVENT MODEL'
_refine.pdbx_solvent_vdw_probe_radii 0.7000
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii 0.3800
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.pdbx_starting_model 2LZM
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_stereochemistry_target_values ML
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.overall_FOM_work_R_set 0.9234
_refine.B_iso_max 64.450
_refine.B_iso_min 5.330
_refine.pdbx_overall_phase_error 14.5000
_refine.occupancy_max 1.000
_refine.occupancy_min 0.300
_refine.pdbx_ls_sigma_I ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_R_factor_R_free_error_details ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.overall_FOM_free_R_set ?
_refine.pdbx_diffrn_id 1
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 1415
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 67
_refine_hist.number_atoms_solvent 316
_refine_hist.number_atoms_total 1798
_refine_hist.d_res_high 1.4000
_refine_hist.d_res_low 19.7840
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
f_bond_d 0.008 ? ? 1541 'X-RAY DIFFRACTION' ?
f_angle_d 1.317 ? ? 2099 'X-RAY DIFFRACTION' ?
f_dihedral_angle_d 15.028 ? ? 599 'X-RAY DIFFRACTION' ?
f_chiral_restr 0.069 ? ? 234 'X-RAY DIFFRACTION' ?
f_plane_restr 0.007 ? ? 257 'X-RAY DIFFRACTION' ?
#
loop_
_refine_ls_shell.pdbx_refine_id
_refine_ls_shell.pdbx_total_number_of_bins_used
_refine_ls_shell.d_res_high
_refine_ls_shell.d_res_low
_refine_ls_shell.number_reflns_R_work
_refine_ls_shell.R_factor_R_work
_refine_ls_shell.percent_reflns_obs
_refine_ls_shell.R_factor_R_free
_refine_ls_shell.R_factor_R_free_error
_refine_ls_shell.percent_reflns_R_free
_refine_ls_shell.number_reflns_R_free
_refine_ls_shell.number_reflns_all
_refine_ls_shell.R_factor_all
_refine_ls_shell.redundancy_reflns_obs
_refine_ls_shell.number_reflns_obs
'X-RAY DIFFRACTION' 10 1.4001 1.4501 6604 0.2370 89.00 0.2684 . . 377 . . . .
'X-RAY DIFFRACTION' 10 1.4501 1.5081 7389 0.1834 99.00 0.2008 . . 369 . . . .
'X-RAY DIFFRACTION' 10 1.5081 1.5768 7359 0.1658 100.00 0.1918 . . 407 . . . .
'X-RAY DIFFRACTION' 10 1.5768 1.6598 7421 0.1447 100.00 0.1954 . . 403 . . . .
'X-RAY DIFFRACTION' 10 1.6598 1.7638 7366 0.1309 100.00 0.1745 . . 421 . . . .
'X-RAY DIFFRACTION' 10 1.7638 1.8999 7424 0.1203 100.00 0.1576 . . 368 . . . .
'X-RAY DIFFRACTION' 10 1.8999 2.0909 7383 0.1397 100.00 0.1715 . . 403 . . . .
'X-RAY DIFFRACTION' 10 2.0909 2.3930 7406 0.1374 100.00 0.1709 . . 378 . . . .
'X-RAY DIFFRACTION' 10 2.3930 3.0132 7416 0.1452 100.00 0.1804 . . 391 . . . .
'X-RAY DIFFRACTION' 10 3.0132 19.7856 7434 0.1490 100.00 0.1730 . . 362 . . . .
#
_struct.entry_id 3RUN
_struct.title 'New strategy to analyze structures of glycopeptide antibiotic-target complexes'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 3RUN
_struct_keywords.text
'antibiotic, glycopeptide, native protein ligation, fusion, carboxymethylation of cysteine, vancomycin, HYDROLASE-ANTIBIOTIC complex'
_struct_keywords.pdbx_keywords HYDROLASE/ANTIBIOTIC
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 4 ?
E N N 5 ?
F N N 6 ?
G N N 7 ?
H N N 8 ?
I N N 9 ?
J N N 9 ?
K N N 5 ?
L N N 10 ?
M N N 10 ?
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 1 ASN A 2 ? GLY A 12 ? ASN A 2 GLY A 12 1 ? 11
HELX_P HELX_P2 2 SER A 38 ? GLY A 51 ? SER A 38 GLY A 51 1 ? 14
HELX_P HELX_P3 3 THR A 59 ? ASN A 81 ? THR A 59 ASN A 81 1 ? 23
HELX_P HELX_P4 4 LYS A 83 ? LEU A 91 ? LYS A 83 LEU A 91 1 ? 9
HELX_P HELX_P5 5 ASP A 92 ? GLY A 107 ? ASP A 92 GLY A 107 1 ? 16
HELX_P HELX_P6 6 GLY A 107 ? GLY A 113 ? GLY A 107 GLY A 113 1 ? 7
HELX_P HELX_P7 7 PHE A 114 ? GLN A 123 ? PHE A 114 GLN A 123 1 ? 10
HELX_P HELX_P8 8 ARG A 125 ? LYS A 135 ? ARG A 125 LYS A 135 1 ? 11
HELX_P HELX_P9 9 SER A 136 ? THR A 142 ? SER A 136 THR A 142 1 ? 7
HELX_P HELX_P10 10 THR A 142 ? GLY A 156 ? THR A 142 GLY A 156 1 ? 15
HELX_P HELX_P11 11 TRP A 158 ? LYS A 162 ? TRP A 158 LYS A 162 5 ? 5
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? A ALA 164 C ? ? ? 1_555 A CCS 165 N ? ? A ALA 164 A CCS 165 1_555 ? ? ? ? ? ? ? 1.333 ? ?
covale2 covale both ? A CCS 165 C ? ? ? 1_555 A LYS 166 N ? ? A CCS 165 A LYS 166 1_555 ? ? ? ? ? ? ? 1.326 ? ?
covale3 covale both ? A LYS 166 C ? ? ? 1_555 A DAL 167 N ? ? A LYS 166 A DAL 167 1_555 ? ? ? ? ? ? ? 1.328 ? ?
covale4 covale both ? A DAL 167 C ? ? ? 1_555 A DAL 168 N ? ? A DAL 167 A DAL 168 1_555 ? ? ? ? ? ? ? 1.326 ? ?
covale5 covale both ? B MLU 1 C ? ? ? 1_555 B OMZ 2 N ? ? B MLU 1 B OMZ 2 1_555 ? ? ? ? ? ? ? 1.335 ? ?
covale6 covale both ? B OMZ 2 C ? ? ? 1_555 B ASN 3 N ? ? B OMZ 2 B ASN 3 1_555 ? ? ? ? ? ? ? 1.337 ? ?
covale7 covale none ? B OMZ 2 OH ? ? ? 1_555 B GHP 4 C5 ? ? B OMZ 2 B GHP 4 1_555 ? ? ? ? ? ? ? 1.400 ? ?
covale8 covale both ? B ASN 3 C ? ? ? 1_555 B GHP 4 N ? ? B ASN 3 B GHP 4 1_555 ? ? ? ? ? ? ? 1.336 ? ?
covale9 covale both ? B GHP 4 C ? ? ? 1_555 B GHP 5 N ? ? B GHP 4 B GHP 5 1_555 ? ? ? ? ? ? ? 1.331 ? ?
covale10 covale none ? B GHP 4 C3 ? ? ? 1_555 B OMY 6 OCZ ? ? B GHP 4 B OMY 6 1_555 ? ? ? ? ? ? ? 1.398 ? ?
covale11 covale one ? B GHP 4 O4 ? ? ? 1_555 C BGC . C1 A ? B GHP 4 C BGC 1 1_555 ? ? ? ? ? ? ? 1.434 ? ?
covale12 covale one ? B GHP 4 O4 ? ? ? 1_555 C BGC . C1 B ? B GHP 4 C BGC 1 1_555 ? ? ? ? ? ? ? 1.430 ? ?
covale13 covale both ? B GHP 5 C ? ? ? 1_555 B OMY 6 N ? ? B GHP 5 B OMY 6 1_555 ? ? ? ? ? ? ? 1.332 ? ?
covale14 covale none ? B GHP 5 C5 ? ? ? 1_555 B 3FG 7 CG2 ? ? B GHP 5 B 3FG 7 1_555 ? ? ? ? ? ? ? 1.419 ? ?
covale15 covale both ? B OMY 6 C ? ? ? 1_555 B 3FG 7 N ? ? B OMY 6 B 3FG 7 1_555 ? ? ? ? ? ? ? 1.326 ? ?
covale16 covale both ? C BGC . O2 A ? ? 1_555 C RER . C1 A ? C BGC 1 C RER 2 1_555 ? ? ? ? ? ? ? 1.429 ? ?
covale17 covale both ? C BGC . O2 B ? ? 1_555 C RER . C1 B ? C BGC 1 C RER 2 1_555 ? ? ? ? ? ? ? 1.431 ? ?
#
_struct_conn_type.id covale
_struct_conn_type.criteria ?
_struct_conn_type.reference ?
#
_struct_mon_prot_cis.pdbx_id 1
_struct_mon_prot_cis.label_comp_id GHP
_struct_mon_prot_cis.label_seq_id 5
_struct_mon_prot_cis.label_asym_id B
_struct_mon_prot_cis.label_alt_id .
_struct_mon_prot_cis.pdbx_PDB_ins_code ?
_struct_mon_prot_cis.auth_comp_id GHP
_struct_mon_prot_cis.auth_seq_id 5
_struct_mon_prot_cis.auth_asym_id B
_struct_mon_prot_cis.pdbx_label_comp_id_2 OMY
_struct_mon_prot_cis.pdbx_label_seq_id_2 6
_struct_mon_prot_cis.pdbx_label_asym_id_2 B
_struct_mon_prot_cis.pdbx_PDB_ins_code_2 ?
_struct_mon_prot_cis.pdbx_auth_comp_id_2 OMY
_struct_mon_prot_cis.pdbx_auth_seq_id_2 6
_struct_mon_prot_cis.pdbx_auth_asym_id_2 B
_struct_mon_prot_cis.pdbx_PDB_model_num 1
_struct_mon_prot_cis.pdbx_omega_angle 5.99
#
_struct_sheet.id A
_struct_sheet.type ?
_struct_sheet.number_strands 3
_struct_sheet.details ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
A 1 2 ? anti-parallel
A 2 3 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
A 1 ARG A 14 ? LYS A 19 ? ARG A 14 LYS A 19
A 2 TYR A 25 ? GLY A 28 ? TYR A 25 GLY A 28
A 3 HIS A 31 ? THR A 34 ? HIS A 31 THR A 34
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
A 1 2 N TYR A 18 ? N TYR A 18 O THR A 26 ? O THR A 26
A 2 3 N TYR A 25 ? N TYR A 25 O LEU A 33 ? O LEU A 33
#
_atom_sites.entry_id 3RUN
_atom_sites.fract_transf_matrix[1][1] 0.016545
_atom_sites.fract_transf_matrix[1][2] 0.009552
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.019105
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.010327
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
CL
N
O
P
S
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 MET 1 1 1 MET MET A . n
A 1 2 ASN 2 2 2 ASN ASN A . n
A 1 3 ILE 3 3 3 ILE ILE A . n
A 1 4 PHE 4 4 4 PHE PHE A . n
A 1 5 GLU 5 5 5 GLU GLU A . n
A 1 6 MET 6 6 6 MET MET A . n
A 1 7 LEU 7 7 7 LEU LEU A . n
A 1 8 ARG 8 8 8 ARG ARG A . n
A 1 9 ILE 9 9 9 ILE ILE A . n
A 1 10 ASP 10 10 10 ASP ASP A . n
A 1 11 GLU 11 11 11 GLU GLU A . n
A 1 12 GLY 12 12 12 GLY GLY A . n
A 1 13 LEU 13 13 13 LEU LEU A . n
A 1 14 ARG 14 14 14 ARG ARG A . n
A 1 15 LEU 15 15 15 LEU LEU A . n
A 1 16 LYS 16 16 16 LYS LYS A . n
A 1 17 ILE 17 17 17 ILE ILE A . n
A 1 18 TYR 18 18 18 TYR TYR A . n
A 1 19 LYS 19 19 19 LYS LYS A . n
A 1 20 ASP 20 20 20 ASP ASP A . n
A 1 21 THR 21 21 21 THR THR A . n
A 1 22 GLU 22 22 22 GLU GLU A . n
A 1 23 GLY 23 23 23 GLY GLY A . n
A 1 24 TYR 24 24 24 TYR TYR A . n
A 1 25 TYR 25 25 25 TYR TYR A . n
A 1 26 THR 26 26 26 THR THR A . n
A 1 27 ILE 27 27 27 ILE ILE A . n
A 1 28 GLY 28 28 28 GLY GLY A . n
A 1 29 ILE 29 29 29 ILE ILE A . n
A 1 30 GLY 30 30 30 GLY GLY A . n
A 1 31 HIS 31 31 31 HIS HIS A . n
A 1 32 LEU 32 32 32 LEU LEU A . n
A 1 33 LEU 33 33 33 LEU LEU A . n
A 1 34 THR 34 34 34 THR THR A . n
A 1 35 LYS 35 35 35 LYS LYS A . n
A 1 36 SER 36 36 36 SER SER A . n
A 1 37 PRO 37 37 37 PRO PRO A . n
A 1 38 SER 38 38 38 SER SER A . n
A 1 39 LEU 39 39 39 LEU LEU A . n
A 1 40 ASN 40 40 40 ASN ASN A . n
A 1 41 ALA 41 41 41 ALA ALA A . n
A 1 42 ALA 42 42 42 ALA ALA A . n
A 1 43 LYS 43 43 43 LYS LYS A . n
A 1 44 SER 44 44 44 SER SER A . n
A 1 45 GLU 45 45 45 GLU GLU A . n
A 1 46 LEU 46 46 46 LEU LEU A . n
A 1 47 ASP 47 47 47 ASP ASP A . n
A 1 48 LYS 48 48 48 LYS LYS A . n
A 1 49 ALA 49 49 49 ALA ALA A . n
A 1 50 ILE 50 50 50 ILE ILE A . n
A 1 51 GLY 51 51 51 GLY GLY A . n
A 1 52 ARG 52 52 52 ARG ARG A . n
A 1 53 ASN 53 53 53 ASN ASN A . n
A 1 54 THR 54 54 54 THR THR A . n
A 1 55 ASN 55 55 55 ASN ASN A . n
A 1 56 GLY 56 56 56 GLY GLY A . n
A 1 57 VAL 57 57 57 VAL VAL A . n
A 1 58 ILE 58 58 58 ILE ILE A . n
A 1 59 THR 59 59 59 THR THR A . n
A 1 60 LYS 60 60 60 LYS LYS A . n
A 1 61 ASP 61 61 61 ASP ASP A . n
A 1 62 GLU 62 62 62 GLU GLU A . n
A 1 63 ALA 63 63 63 ALA ALA A . n
A 1 64 GLU 64 64 64 GLU GLU A . n
A 1 65 LYS 65 65 65 LYS LYS A . n
A 1 66 LEU 66 66 66 LEU LEU A . n
A 1 67 PHE 67 67 67 PHE PHE A . n
A 1 68 ASN 68 68 68 ASN ASN A . n
A 1 69 GLN 69 69 69 GLN GLN A . n
A 1 70 ASP 70 70 70 ASP ASP A . n
A 1 71 VAL 71 71 71 VAL VAL A . n
A 1 72 ASP 72 72 72 ASP ASP A . n
A 1 73 ALA 73 73 73 ALA ALA A . n
A 1 74 ALA 74 74 74 ALA ALA A . n
A 1 75 VAL 75 75 75 VAL VAL A . n
A 1 76 ARG 76 76 76 ARG ARG A . n
A 1 77 GLY 77 77 77 GLY GLY A . n
A 1 78 ILE 78 78 78 ILE ILE A . n
A 1 79 LEU 79 79 79 LEU LEU A . n
A 1 80 ARG 80 80 80 ARG ARG A . n
A 1 81 ASN 81 81 81 ASN ASN A . n
A 1 82 ALA 82 82 82 ALA ALA A . n
A 1 83 LYS 83 83 83 LYS LYS A . n
A 1 84 LEU 84 84 84 LEU LEU A . n
A 1 85 LYS 85 85 85 LYS LYS A . n
A 1 86 PRO 86 86 86 PRO PRO A . n
A 1 87 VAL 87 87 87 VAL VAL A . n
A 1 88 TYR 88 88 88 TYR TYR A . n
A 1 89 ASP 89 89 89 ASP ASP A . n
A 1 90 SER 90 90 90 SER SER A . n
A 1 91 LEU 91 91 91 LEU LEU A . n
A 1 92 ASP 92 92 92 ASP ASP A . n
A 1 93 ALA 93 93 93 ALA ALA A . n
A 1 94 VAL 94 94 94 VAL VAL A . n
A 1 95 ARG 95 95 95 ARG ARG A . n
A 1 96 ARG 96 96 96 ARG ARG A . n
A 1 97 ALA 97 97 97 ALA ALA A . n
A 1 98 ALA 98 98 98 ALA ALA A . n
A 1 99 LEU 99 99 99 LEU LEU A . n
A 1 100 ILE 100 100 100 ILE ILE A . n
A 1 101 ASN 101 101 101 ASN ASN A . n
A 1 102 MET 102 102 102 MET MET A . n
A 1 103 VAL 103 103 103 VAL VAL A . n
A 1 104 PHE 104 104 104 PHE PHE A . n
A 1 105 GLN 105 105 105 GLN GLN A . n
A 1 106 MET 106 106 106 MET MET A . n
A 1 107 GLY 107 107 107 GLY GLY A . n
A 1 108 GLU 108 108 108 GLU GLU A . n
A 1 109 THR 109 109 109 THR THR A . n
A 1 110 GLY 110 110 110 GLY GLY A . n
A 1 111 VAL 111 111 111 VAL VAL A . n
A 1 112 ALA 112 112 112 ALA ALA A . n
A 1 113 GLY 113 113 113 GLY GLY A . n
A 1 114 PHE 114 114 114 PHE PHE A . n
A 1 115 THR 115 115 115 THR THR A . n
A 1 116 ASN 116 116 116 ASN ASN A . n
A 1 117 SER 117 117 117 SER SER A . n
A 1 118 LEU 118 118 118 LEU LEU A . n
A 1 119 ARG 119 119 119 ARG ARG A . n
A 1 120 MET 120 120 120 MET MET A . n
A 1 121 LEU 121 121 121 LEU LEU A . n
A 1 122 GLN 122 122 122 GLN GLN A . n
A 1 123 GLN 123 123 123 GLN GLN A . n
A 1 124 LYS 124 124 124 LYS LYS A . n
A 1 125 ARG 125 125 125 ARG ARG A . n
A 1 126 TRP 126 126 126 TRP TRP A . n
A 1 127 ASP 127 127 127 ASP ASP A . n
A 1 128 GLU 128 128 128 GLU GLU A . n
A 1 129 ALA 129 129 129 ALA ALA A . n
A 1 130 ALA 130 130 130 ALA ALA A . n
A 1 131 VAL 131 131 131 VAL VAL A . n
A 1 132 ASN 132 132 132 ASN ASN A . n
A 1 133 LEU 133 133 133 LEU LEU A . n
A 1 134 ALA 134 134 134 ALA ALA A . n
A 1 135 LYS 135 135 135 LYS LYS A . n
A 1 136 SER 136 136 136 SER SER A . n
A 1 137 ARG 137 137 137 ARG ARG A . n
A 1 138 TRP 138 138 138 TRP TRP A . n
A 1 139 TYR 139 139 139 TYR TYR A . n
A 1 140 ASN 140 140 140 ASN ASN A . n
A 1 141 GLN 141 141 141 GLN GLN A . n
A 1 142 THR 142 142 142 THR THR A . n
A 1 143 PRO 143 143 143 PRO PRO A . n
A 1 144 ASN 144 144 144 ASN ASN A . n
A 1 145 ARG 145 145 145 ARG ARG A . n
A 1 146 ALA 146 146 146 ALA ALA A . n
A 1 147 LYS 147 147 147 LYS LYS A . n
A 1 148 ARG 148 148 148 ARG ARG A . n
A 1 149 VAL 149 149 149 VAL VAL A . n
A 1 150 ILE 150 150 150 ILE ILE A . n
A 1 151 THR 151 151 151 THR THR A . n
A 1 152 THR 152 152 152 THR THR A . n
A 1 153 PHE 153 153 153 PHE PHE A . n
A 1 154 ARG 154 154 154 ARG ARG A . n
A 1 155 THR 155 155 155 THR THR A . n
A 1 156 GLY 156 156 156 GLY GLY A . n
A 1 157 THR 157 157 157 THR THR A . n
A 1 158 TRP 158 158 158 TRP TRP A . n
A 1 159 ASP 159 159 159 ASP ASP A . n
A 1 160 ALA 160 160 160 ALA ALA A . n
A 1 161 TYR 161 161 161 TYR TYR A . n
A 1 162 LYS 162 162 162 LYS LYS A . n
A 1 163 ASN 163 163 163 ASN ASN A . n
A 1 164 ALA 164 164 164 ALA ALA A . n
A 1 165 CCS 165 165 165 CCS CCS A . n
A 1 166 LYS 166 166 166 LYS LYS A . n
A 1 167 DAL 167 167 167 DAL DAL A . n
A 1 168 DAL 168 168 168 DAL DAL A . n
B 2 1 MLU 1 1 1 MLU MLU B . n
B 2 2 OMZ 2 2 2 OMZ OMZ B . n
B 2 3 ASN 3 3 3 ASN ASN B . n
B 2 4 GHP 4 4 4 GHP GHP B . n
B 2 5 GHP 5 5 5 GHP GHP B . n
B 2 6 OMY 6 6 6 OMY OMY B . n
B 2 7 3FG 7 7 7 3FG 3FG B . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 MPD 1 201 201 MPD MPD A .
E 5 MRD 1 202 202 MRD MRD A .
F 6 PO4 1 203 203 PO4 PO4 A .
G 7 TRS 1 204 204 TRS TRS A .
H 8 CL 1 205 205 CL CL A .
I 9 IPA 1 206 206 IPA IPA A .
J 9 IPA 1 207 207 IPA IPA A .
K 5 MRD 1 103 103 MRD MRD B .
L 10 HOH 1 301 301 HOH HOH A .
L 10 HOH 2 302 302 HOH HOH A .
L 10 HOH 3 303 303 HOH HOH A .
L 10 HOH 4 304 304 HOH HOH A .
L 10 HOH 5 305 305 HOH HOH A .
L 10 HOH 6 306 306 HOH HOH A .
L 10 HOH 7 307 307 HOH HOH A .
L 10 HOH 8 308 308 HOH HOH A .
L 10 HOH 9 309 309 HOH HOH A .
L 10 HOH 10 310 310 HOH HOH A .
L 10 HOH 11 311 311 HOH HOH A .
L 10 HOH 12 312 312 HOH HOH A .
L 10 HOH 13 313 313 HOH HOH A .
L 10 HOH 14 314 314 HOH HOH A .
L 10 HOH 15 315 315 HOH HOH A .
L 10 HOH 16 316 316 HOH HOH A .
L 10 HOH 17 317 317 HOH HOH A .
L 10 HOH 18 318 318 HOH HOH A .
L 10 HOH 19 319 319 HOH HOH A .
L 10 HOH 20 320 320 HOH HOH A .
L 10 HOH 21 321 321 HOH HOH A .
L 10 HOH 22 322 322 HOH HOH A .
L 10 HOH 23 323 323 HOH HOH A .
L 10 HOH 24 324 324 HOH HOH A .
L 10 HOH 25 325 325 HOH HOH A .
L 10 HOH 26 326 326 HOH HOH A .
L 10 HOH 27 327 327 HOH HOH A .
L 10 HOH 28 328 328 HOH HOH A .
L 10 HOH 29 329 329 HOH HOH A .
L 10 HOH 30 330 330 HOH HOH A .
L 10 HOH 31 331 331 HOH HOH A .
L 10 HOH 32 332 332 HOH HOH A .
L 10 HOH 33 333 333 HOH HOH A .
L 10 HOH 34 334 334 HOH HOH A .
L 10 HOH 35 335 335 HOH HOH A .
L 10 HOH 36 336 336 HOH HOH A .
L 10 HOH 37 337 337 HOH HOH A .
L 10 HOH 38 338 338 HOH HOH A .
L 10 HOH 39 339 339 HOH HOH A .
L 10 HOH 40 340 340 HOH HOH A .
L 10 HOH 41 341 341 HOH HOH A .
L 10 HOH 42 342 342 HOH HOH A .
L 10 HOH 43 343 343 HOH HOH A .
L 10 HOH 44 344 344 HOH HOH A .
L 10 HOH 45 345 345 HOH HOH A .
L 10 HOH 46 346 346 HOH HOH A .
L 10 HOH 47 347 347 HOH HOH A .
L 10 HOH 48 348 348 HOH HOH A .
L 10 HOH 49 349 349 HOH HOH A .
L 10 HOH 50 350 350 HOH HOH A .
L 10 HOH 51 351 351 HOH HOH A .
L 10 HOH 52 352 352 HOH HOH A .
L 10 HOH 53 353 353 HOH HOH A .
L 10 HOH 54 354 354 HOH HOH A .
L 10 HOH 55 355 355 HOH HOH A .
L 10 HOH 56 356 356 HOH HOH A .
L 10 HOH 57 357 357 HOH HOH A .
L 10 HOH 58 358 358 HOH HOH A .
L 10 HOH 59 359 359 HOH HOH A .
L 10 HOH 60 360 360 HOH HOH A .
L 10 HOH 61 361 361 HOH HOH A .
L 10 HOH 62 362 362 HOH HOH A .
L 10 HOH 63 363 363 HOH HOH A .
L 10 HOH 64 364 364 HOH HOH A .
L 10 HOH 65 365 365 HOH HOH A .
L 10 HOH 66 366 366 HOH HOH A .
L 10 HOH 67 367 367 HOH HOH A .
L 10 HOH 68 368 368 HOH HOH A .
L 10 HOH 69 369 369 HOH HOH A .
L 10 HOH 70 370 370 HOH HOH A .
L 10 HOH 71 371 371 HOH HOH A .
L 10 HOH 72 372 372 HOH HOH A .
L 10 HOH 73 373 373 HOH HOH A .
L 10 HOH 74 374 374 HOH HOH A .
L 10 HOH 75 375 375 HOH HOH A .
L 10 HOH 76 376 376 HOH HOH A .
L 10 HOH 77 377 377 HOH HOH A .
L 10 HOH 78 378 378 HOH HOH A .
L 10 HOH 79 379 379 HOH HOH A .
L 10 HOH 80 380 380 HOH HOH A .
L 10 HOH 81 381 381 HOH HOH A .
L 10 HOH 82 382 382 HOH HOH A .
L 10 HOH 83 383 383 HOH HOH A .
L 10 HOH 84 384 384 HOH HOH A .
L 10 HOH 85 385 385 HOH HOH A .
L 10 HOH 86 386 386 HOH HOH A .
L 10 HOH 87 387 387 HOH HOH A .
L 10 HOH 88 388 388 HOH HOH A .
L 10 HOH 89 389 389 HOH HOH A .
L 10 HOH 90 390 390 HOH HOH A .
L 10 HOH 91 391 391 HOH HOH A .
L 10 HOH 92 392 392 HOH HOH A .
L 10 HOH 93 393 393 HOH HOH A .
L 10 HOH 94 394 394 HOH HOH A .
L 10 HOH 95 395 395 HOH HOH A .
L 10 HOH 96 396 396 HOH HOH A .
L 10 HOH 97 397 397 HOH HOH A .
L 10 HOH 98 398 398 HOH HOH A .
L 10 HOH 99 399 399 HOH HOH A .
L 10 HOH 100 400 400 HOH HOH A .
L 10 HOH 101 401 401 HOH HOH A .
L 10 HOH 102 402 402 HOH HOH A .
L 10 HOH 103 403 403 HOH HOH A .
L 10 HOH 104 404 404 HOH HOH A .
L 10 HOH 105 405 405 HOH HOH A .
L 10 HOH 106 406 406 HOH HOH A .
L 10 HOH 107 407 407 HOH HOH A .
L 10 HOH 108 408 408 HOH HOH A .
L 10 HOH 109 409 409 HOH HOH A .
L 10 HOH 110 410 410 HOH HOH A .
L 10 HOH 111 411 411 HOH HOH A .
L 10 HOH 112 412 412 HOH HOH A .
L 10 HOH 113 413 413 HOH HOH A .
L 10 HOH 114 414 414 HOH HOH A .
L 10 HOH 115 415 415 HOH HOH A .
L 10 HOH 116 416 416 HOH HOH A .
L 10 HOH 117 417 417 HOH HOH A .
L 10 HOH 118 418 418 HOH HOH A .
L 10 HOH 119 419 419 HOH HOH A .
L 10 HOH 120 420 420 HOH HOH A .
L 10 HOH 121 421 421 HOH HOH A .
L 10 HOH 122 422 422 HOH HOH A .
L 10 HOH 123 423 423 HOH HOH A .
L 10 HOH 124 424 424 HOH HOH A .
L 10 HOH 125 425 425 HOH HOH A .
L 10 HOH 126 426 426 HOH HOH A .
L 10 HOH 127 427 427 HOH HOH A .
L 10 HOH 128 428 428 HOH HOH A .
L 10 HOH 129 429 429 HOH HOH A .
L 10 HOH 130 430 430 HOH HOH A .
L 10 HOH 131 431 431 HOH HOH A .
L 10 HOH 132 432 432 HOH HOH A .
L 10 HOH 133 433 433 HOH HOH A .
L 10 HOH 134 434 434 HOH HOH A .
L 10 HOH 135 435 435 HOH HOH A .
L 10 HOH 136 436 436 HOH HOH A .
L 10 HOH 137 437 437 HOH HOH A .
L 10 HOH 138 438 438 HOH HOH A .
L 10 HOH 139 439 439 HOH HOH A .
L 10 HOH 140 440 440 HOH HOH A .
L 10 HOH 141 441 441 HOH HOH A .
L 10 HOH 142 442 442 HOH HOH A .
L 10 HOH 143 443 443 HOH HOH A .
L 10 HOH 144 444 444 HOH HOH A .
L 10 HOH 145 445 445 HOH HOH A .
L 10 HOH 146 446 446 HOH HOH A .
L 10 HOH 147 447 447 HOH HOH A .
L 10 HOH 148 448 448 HOH HOH A .
L 10 HOH 149 449 449 HOH HOH A .
L 10 HOH 150 450 450 HOH HOH A .
L 10 HOH 151 451 451 HOH HOH A .
L 10 HOH 152 452 452 HOH HOH A .
L 10 HOH 153 453 453 HOH HOH A .
L 10 HOH 154 454 454 HOH HOH A .
L 10 HOH 155 455 455 HOH HOH A .
L 10 HOH 156 456 456 HOH HOH A .
L 10 HOH 157 457 457 HOH HOH A .
L 10 HOH 158 458 458 HOH HOH A .
L 10 HOH 159 459 459 HOH HOH A .
L 10 HOH 160 460 460 HOH HOH A .
L 10 HOH 161 461 461 HOH HOH A .
L 10 HOH 162 462 462 HOH HOH A .
L 10 HOH 163 463 463 HOH HOH A .
L 10 HOH 164 464 464 HOH HOH A .
L 10 HOH 165 465 465 HOH HOH A .
L 10 HOH 166 466 466 HOH HOH A .
L 10 HOH 167 467 467 HOH HOH A .
L 10 HOH 168 468 468 HOH HOH A .
L 10 HOH 169 469 469 HOH HOH A .
L 10 HOH 170 470 470 HOH HOH A .
L 10 HOH 171 471 471 HOH HOH A .
L 10 HOH 172 472 472 HOH HOH A .
L 10 HOH 173 473 473 HOH HOH A .
L 10 HOH 174 474 474 HOH HOH A .
L 10 HOH 175 475 475 HOH HOH A .
L 10 HOH 176 476 476 HOH HOH A .
L 10 HOH 177 477 477 HOH HOH A .
L 10 HOH 178 478 478 HOH HOH A .
L 10 HOH 179 479 479 HOH HOH A .
L 10 HOH 180 480 480 HOH HOH A .
L 10 HOH 181 481 481 HOH HOH A .
L 10 HOH 182 482 482 HOH HOH A .
L 10 HOH 183 483 483 HOH HOH A .
L 10 HOH 184 484 484 HOH HOH A .
L 10 HOH 185 485 485 HOH HOH A .
L 10 HOH 186 486 486 HOH HOH A .
L 10 HOH 187 487 487 HOH HOH A .
L 10 HOH 188 488 488 HOH HOH A .
L 10 HOH 189 489 489 HOH HOH A .
L 10 HOH 190 490 490 HOH HOH A .
L 10 HOH 191 491 491 HOH HOH A .
L 10 HOH 192 492 492 HOH HOH A .
L 10 HOH 193 493 493 HOH HOH A .
L 10 HOH 194 494 494 HOH HOH A .
L 10 HOH 195 495 495 HOH HOH A .
L 10 HOH 196 496 496 HOH HOH A .
L 10 HOH 197 497 497 HOH HOH A .
L 10 HOH 198 498 498 HOH HOH A .
L 10 HOH 199 499 499 HOH HOH A .
L 10 HOH 200 500 500 HOH HOH A .
L 10 HOH 201 501 501 HOH HOH A .
L 10 HOH 202 502 502 HOH HOH A .
L 10 HOH 203 503 503 HOH HOH A .
L 10 HOH 204 504 504 HOH HOH A .
L 10 HOH 205 505 505 HOH HOH A .
L 10 HOH 206 506 506 HOH HOH A .
L 10 HOH 207 507 507 HOH HOH A .
L 10 HOH 208 508 508 HOH HOH A .
L 10 HOH 209 509 509 HOH HOH A .
L 10 HOH 210 510 510 HOH HOH A .
L 10 HOH 211 511 511 HOH HOH A .
L 10 HOH 212 512 512 HOH HOH A .
L 10 HOH 213 513 513 HOH HOH A .
L 10 HOH 214 514 514 HOH HOH A .
L 10 HOH 215 515 515 HOH HOH A .
L 10 HOH 216 516 516 HOH HOH A .
L 10 HOH 217 517 517 HOH HOH A .
L 10 HOH 218 518 518 HOH HOH A .
L 10 HOH 219 519 519 HOH HOH A .
L 10 HOH 220 520 520 HOH HOH A .
L 10 HOH 221 521 521 HOH HOH A .
L 10 HOH 222 522 522 HOH HOH A .
L 10 HOH 223 523 523 HOH HOH A .
L 10 HOH 224 524 524 HOH HOH A .
L 10 HOH 225 525 525 HOH HOH A .
L 10 HOH 226 526 526 HOH HOH A .
L 10 HOH 227 527 527 HOH HOH A .
L 10 HOH 228 528 528 HOH HOH A .
L 10 HOH 229 529 529 HOH HOH A .
L 10 HOH 230 530 530 HOH HOH A .
L 10 HOH 231 531 531 HOH HOH A .
L 10 HOH 232 532 532 HOH HOH A .
L 10 HOH 233 533 533 HOH HOH A .
L 10 HOH 234 534 534 HOH HOH A .
L 10 HOH 235 535 535 HOH HOH A .
L 10 HOH 236 536 536 HOH HOH A .
L 10 HOH 237 537 537 HOH HOH A .
L 10 HOH 238 538 538 HOH HOH A .
L 10 HOH 239 539 539 HOH HOH A .
L 10 HOH 240 540 540 HOH HOH A .
L 10 HOH 241 541 541 HOH HOH A .
L 10 HOH 242 542 542 HOH HOH A .
L 10 HOH 243 543 543 HOH HOH A .
L 10 HOH 244 544 544 HOH HOH A .
L 10 HOH 245 545 545 HOH HOH A .
L 10 HOH 246 546 546 HOH HOH A .
L 10 HOH 247 547 547 HOH HOH A .
L 10 HOH 248 548 548 HOH HOH A .
L 10 HOH 249 549 549 HOH HOH A .
L 10 HOH 250 550 550 HOH HOH A .
L 10 HOH 251 551 551 HOH HOH A .
L 10 HOH 252 552 552 HOH HOH A .
L 10 HOH 253 553 553 HOH HOH A .
L 10 HOH 254 554 554 HOH HOH A .
L 10 HOH 255 555 555 HOH HOH A .
L 10 HOH 256 556 556 HOH HOH A .
L 10 HOH 257 557 557 HOH HOH A .
L 10 HOH 258 558 558 HOH HOH A .
L 10 HOH 259 559 559 HOH HOH A .
L 10 HOH 260 560 560 HOH HOH A .
L 10 HOH 261 561 561 HOH HOH A .
L 10 HOH 262 562 562 HOH HOH A .
L 10 HOH 263 563 563 HOH HOH A .
L 10 HOH 264 564 564 HOH HOH A .
L 10 HOH 265 565 565 HOH HOH A .
L 10 HOH 266 566 566 HOH HOH A .
L 10 HOH 267 567 567 HOH HOH A .
L 10 HOH 268 568 568 HOH HOH A .
L 10 HOH 269 569 569 HOH HOH A .
L 10 HOH 270 570 570 HOH HOH A .
L 10 HOH 271 571 571 HOH HOH A .
L 10 HOH 272 572 572 HOH HOH A .
L 10 HOH 273 573 573 HOH HOH A .
L 10 HOH 274 574 574 HOH HOH A .
L 10 HOH 275 575 575 HOH HOH A .
L 10 HOH 276 576 576 HOH HOH A .
L 10 HOH 277 577 577 HOH HOH A .
L 10 HOH 278 578 578 HOH HOH A .
L 10 HOH 279 579 579 HOH HOH A .
L 10 HOH 280 580 580 HOH HOH A .
L 10 HOH 281 581 581 HOH HOH A .
L 10 HOH 282 582 582 HOH HOH A .
L 10 HOH 283 583 583 HOH HOH A .
L 10 HOH 284 584 584 HOH HOH A .
L 10 HOH 285 585 585 HOH HOH A .
L 10 HOH 286 586 586 HOH HOH A .
L 10 HOH 287 587 587 HOH HOH A .
L 10 HOH 288 588 588 HOH HOH A .
L 10 HOH 289 589 589 HOH HOH A .
L 10 HOH 290 590 590 HOH HOH A .
L 10 HOH 291 591 591 HOH HOH A .
L 10 HOH 292 592 592 HOH HOH A .
L 10 HOH 293 593 593 HOH HOH A .
L 10 HOH 294 594 594 HOH HOH A .
L 10 HOH 295 595 595 HOH HOH A .
L 10 HOH 296 596 596 HOH HOH A .
L 10 HOH 297 597 597 HOH HOH A .
L 10 HOH 298 598 598 HOH HOH A .
L 10 HOH 299 599 599 HOH HOH A .
L 10 HOH 300 600 600 HOH HOH A .
L 10 HOH 301 601 601 HOH HOH A .
L 10 HOH 302 602 602 HOH HOH A .
L 10 HOH 303 603 603 HOH HOH A .
M 10 HOH 1 201 201 HOH HOH B .
M 10 HOH 2 202 202 HOH HOH B .
M 10 HOH 3 203 203 HOH HOH B .
M 10 HOH 4 204 204 HOH HOH B .
M 10 HOH 5 205 205 HOH HOH B .
M 10 HOH 6 206 206 HOH HOH B .
M 10 HOH 7 207 207 HOH HOH B .
M 10 HOH 8 208 208 HOH HOH B .
M 10 HOH 9 209 209 HOH HOH B .
M 10 HOH 10 210 210 HOH HOH B .
M 10 HOH 11 211 211 HOH HOH B .
M 10 HOH 12 212 212 HOH HOH B .
M 10 HOH 13 213 213 HOH HOH B .
#
_pdbx_molecule_features.prd_id PRD_000204
_pdbx_molecule_features.name VANCOMYCIN
_pdbx_molecule_features.type Glycopeptide
_pdbx_molecule_features.class Antibiotic
_pdbx_molecule_features.details
;VANCOMYCIN IS A TRICYCLIC GLYCOPEPTIDE,
GLYCOSYLATED BY A DISACCHARIDE (RESIDUES 8
AND 9) ON RESIDUE 4.
;
#
loop_
_pdbx_molecule.instance_id
_pdbx_molecule.prd_id
_pdbx_molecule.asym_id
1 PRD_000204 B
1 PRD_000204 C
#
_pdbx_struct_mod_residue.id 1
_pdbx_struct_mod_residue.label_asym_id A
_pdbx_struct_mod_residue.label_comp_id CCS
_pdbx_struct_mod_residue.label_seq_id 165
_pdbx_struct_mod_residue.auth_asym_id A
_pdbx_struct_mod_residue.auth_comp_id CCS
_pdbx_struct_mod_residue.auth_seq_id 165
_pdbx_struct_mod_residue.PDB_ins_code ?
_pdbx_struct_mod_residue.parent_comp_id CYS
_pdbx_struct_mod_residue.details 'CARBOXYMETHYLATED CYSTEINE'
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
loop_
_pdbx_struct_special_symmetry.id
_pdbx_struct_special_symmetry.PDB_model_num
_pdbx_struct_special_symmetry.auth_asym_id
_pdbx_struct_special_symmetry.auth_comp_id
_pdbx_struct_special_symmetry.auth_seq_id
_pdbx_struct_special_symmetry.PDB_ins_code
_pdbx_struct_special_symmetry.label_asym_id
_pdbx_struct_special_symmetry.label_comp_id
_pdbx_struct_special_symmetry.label_seq_id
1 1 A HOH 535 ? L HOH .
2 1 B HOH 206 ? M HOH .
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2012-06-06
2 'Structure model' 1 1 2013-02-27
3 'Structure model' 2 0 2020-07-29
4 'Structure model' 2 1 2023-09-13
5 'Structure model' 2 2 2023-12-06
#
loop_
_pdbx_audit_revision_details.ordinal
_pdbx_audit_revision_details.revision_ordinal
_pdbx_audit_revision_details.data_content_type
_pdbx_audit_revision_details.provider
_pdbx_audit_revision_details.type
_pdbx_audit_revision_details.description
_pdbx_audit_revision_details.details
1 1 'Structure model' repository 'Initial release' ? ?
2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' Other
2 3 'Structure model' 'Atomic model'
3 3 'Structure model' 'Data collection'
4 3 'Structure model' 'Database references'
5 3 'Structure model' 'Derived calculations'
6 3 'Structure model' 'Polymer sequence'
7 3 'Structure model' 'Structure summary'
8 4 'Structure model' 'Data collection'
9 4 'Structure model' 'Database references'
10 4 'Structure model' 'Refinement description'
11 4 'Structure model' 'Structure summary'
12 5 'Structure model' 'Data collection'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 3 'Structure model' atom_site
2 3 'Structure model' chem_comp
3 3 'Structure model' entity
4 3 'Structure model' entity_poly
5 3 'Structure model' pdbx_branch_scheme
6 3 'Structure model' pdbx_chem_comp_identifier
7 3 'Structure model' pdbx_entity_branch
8 3 'Structure model' pdbx_entity_branch_descriptor
9 3 'Structure model' pdbx_entity_branch_link
10 3 'Structure model' pdbx_entity_branch_list
11 3 'Structure model' pdbx_entity_nonpoly
12 3 'Structure model' pdbx_molecule
13 3 'Structure model' pdbx_nonpoly_scheme
14 3 'Structure model' pdbx_struct_assembly_gen
15 3 'Structure model' pdbx_struct_special_symmetry
16 3 'Structure model' struct_asym
17 3 'Structure model' struct_conn
18 3 'Structure model' struct_ref_seq_dif
19 3 'Structure model' struct_site
20 3 'Structure model' struct_site_gen
21 4 'Structure model' chem_comp
22 4 'Structure model' chem_comp_atom
23 4 'Structure model' chem_comp_bond
24 4 'Structure model' database_2
25 4 'Structure model' pdbx_initial_refinement_model
26 5 'Structure model' chem_comp_atom
27 5 'Structure model' chem_comp_bond
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 3 'Structure model' '_atom_site.B_iso_or_equiv'
2 3 'Structure model' '_atom_site.Cartn_x'
3 3 'Structure model' '_atom_site.Cartn_y'
4 3 'Structure model' '_atom_site.Cartn_z'
5 3 'Structure model' '_atom_site.auth_asym_id'
6 3 'Structure model' '_atom_site.auth_atom_id'
7 3 'Structure model' '_atom_site.auth_comp_id'
8 3 'Structure model' '_atom_site.auth_seq_id'
9 3 'Structure model' '_atom_site.label_alt_id'
10 3 'Structure model' '_atom_site.label_asym_id'
11 3 'Structure model' '_atom_site.label_atom_id'
12 3 'Structure model' '_atom_site.label_comp_id'
13 3 'Structure model' '_atom_site.label_entity_id'
14 3 'Structure model' '_atom_site.occupancy'
15 3 'Structure model' '_atom_site.type_symbol'
16 3 'Structure model' '_chem_comp.name'
17 3 'Structure model' '_chem_comp.type'
18 3 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can'
19 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list'
20 3 'Structure model' '_pdbx_struct_special_symmetry.label_asym_id'
21 3 'Structure model' '_struct_conn.pdbx_dist_value'
22 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
23 3 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id'
24 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id'
25 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id'
26 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
27 3 'Structure model' '_struct_conn.ptnr1_label_asym_id'
28 3 'Structure model' '_struct_conn.ptnr1_label_atom_id'
29 3 'Structure model' '_struct_conn.ptnr1_label_comp_id'
30 3 'Structure model' '_struct_conn.ptnr1_label_seq_id'
31 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id'
32 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
33 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
34 3 'Structure model' '_struct_conn.ptnr2_label_asym_id'
35 3 'Structure model' '_struct_conn.ptnr2_label_atom_id'
36 3 'Structure model' '_struct_conn.ptnr2_label_comp_id'
37 3 'Structure model' '_struct_conn.ptnr2_label_seq_id'
38 3 'Structure model' '_struct_ref_seq_dif.details'
39 4 'Structure model' '_chem_comp.pdbx_synonyms'
40 4 'Structure model' '_database_2.pdbx_DOI'
41 4 'Structure model' '_database_2.pdbx_database_accession'
42 5 'Structure model' '_chem_comp_atom.atom_id'
43 5 'Structure model' '_chem_comp_bond.atom_id_2'
#
_pdbx_phasing_MR.entry_id 3RUN
_pdbx_phasing_MR.method_rotation ?
_pdbx_phasing_MR.method_translation ?
_pdbx_phasing_MR.model_details ?
_pdbx_phasing_MR.R_factor ?
_pdbx_phasing_MR.R_rigid_body ?
_pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ?
_pdbx_phasing_MR.correlation_coeff_Io_to_Ic ?
_pdbx_phasing_MR.d_res_high_rotation 1.560
_pdbx_phasing_MR.d_res_low_rotation 19.780
_pdbx_phasing_MR.d_res_high_translation 1.560
_pdbx_phasing_MR.d_res_low_translation 19.780
_pdbx_phasing_MR.packing ?
_pdbx_phasing_MR.reflns_percent_rotation ?
_pdbx_phasing_MR.reflns_percent_translation ?
_pdbx_phasing_MR.sigma_F_rotation ?
_pdbx_phasing_MR.sigma_F_translation ?
_pdbx_phasing_MR.sigma_I_rotation ?
_pdbx_phasing_MR.sigma_I_translation ?
#
_phasing.method MR
#
loop_
_software.pdbx_ordinal
_software.name
_software.version
_software.date
_software.type
_software.contact_author
_software.contact_author_email
_software.classification
_software.location
_software.language
_software.citation_id
1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling'
http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ?
2 MOLREP . ? program 'Alexei Vaguine' alexei@ysbl.york.ac.uk phasing
http://www.ccp4.ac.uk/dist/html/molrep.html Fortran_77 ?
3 PHENIX 1.6.2_432 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement
http://www.phenix-online.org/ C++ ?
4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction'
http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ?
5 XDS . ? ? ? ? 'data reduction' ? ? ?
#
_pdbx_entry_details.entry_id 3RUN
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details
;THE AUTHORS STATE THAT THESE RESIDUES ARE LIGATED NON-RECOMBINANTLY WITH NATIVE PROTEIN LIGATION AFTER PROTEIN EXPRESSION AND PURIFICATION.
;
_pdbx_entry_details.compound_details
;VANCOMYCIN IS A TRICYCLIC GLYCOPEPTIDE. THE SCAFFOLD IS
A HEPTAPEPTIDE WITH THE CONFIGURATION D-D-L-D-D-L-L. IT IS
FURTHER GLYCOSYLATED BY A DISACCHARIDE MADE OF D-GLUCOSE
AND VANCOSAMINE.
HERE, VANCOMYCIN IS REPRESENTED BY GROUPING TOGETHER THE
SEQUENCE (SEQRES) AND THE TWO LIGANDS (HET) BGC AND RER.
GROUP: 1
NAME: VANCOMYCIN
CHAIN: B
COMPONENT_1: PEPTIDE LIKE SEQUENCE RESIDUES 1 TO 7
COMPONENT_2: SUGAR (2-MER) RESIDUES 8 AND 9
DESCRIPTION: VANCOMYCIN IS A TRICYCLIC GLYCOPEPTIDE,
GLYCOSYLATED BY A DISACCHARIDE (RESIDUES 8
AND 9) ON RESIDUE 4.
VANCOMYCIN IS A TRICYCLIC GLYCOPEPTIDE. THE SCAFFOLD IS
A HEPTAPEPTIDE WITH THE CONFIGURATION D-D-L-D-D-L-L. IT IS
FURTHER GLYCOSYLATED BY A DISACCHARIDE MADE OF D-GLUCOSE
AND VANCOSAMINE.
HERE, VANCOMYCIN IS REPRESENTED BY GROUPING TOUGHER THE
SEQUENCE (SEQRES) AND THE TWO LIGANDS (HET) BGC AND RER.
;
_pdbx_entry_details.source_details ?
_pdbx_entry_details.has_ligand_of_interest ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
3FG N N N N 1
3FG OD1 O N N 2
3FG CD1 C Y N 3
3FG CG1 C Y N 4
3FG CZ C Y N 5
3FG CD2 C Y N 6
3FG OD2 O N N 7
3FG CG2 C Y N 8
3FG CB C Y N 9
3FG CA C N S 10
3FG C C N N 11
3FG O O N N 12
3FG OXT O N N 13
3FG H H N N 14
3FG H2 H N N 15
3FG HA H N N 16
3FG HD1 H N N 17
3FG HG1 H N N 18
3FG HZ H N N 19
3FG HD2 H N N 20
3FG HG2 H N N 21
3FG HXT H N N 22
ALA N N N N 23
ALA CA C N S 24
ALA C C N N 25
ALA O O N N 26
ALA CB C N N 27
ALA OXT O N N 28
ALA H H N N 29
ALA H2 H N N 30
ALA HA H N N 31
ALA HB1 H N N 32
ALA HB2 H N N 33
ALA HB3 H N N 34
ALA HXT H N N 35
ARG N N N N 36
ARG CA C N S 37
ARG C C N N 38
ARG O O N N 39
ARG CB C N N 40
ARG CG C N N 41
ARG CD C N N 42
ARG NE N N N 43
ARG CZ C N N 44
ARG NH1 N N N 45
ARG NH2 N N N 46
ARG OXT O N N 47
ARG H H N N 48
ARG H2 H N N 49
ARG HA H N N 50
ARG HB2 H N N 51
ARG HB3 H N N 52
ARG HG2 H N N 53
ARG HG3 H N N 54
ARG HD2 H N N 55
ARG HD3 H N N 56
ARG HE H N N 57
ARG HH11 H N N 58
ARG HH12 H N N 59
ARG HH21 H N N 60
ARG HH22 H N N 61
ARG HXT H N N 62
ASN N N N N 63
ASN CA C N S 64
ASN C C N N 65
ASN O O N N 66
ASN CB C N N 67
ASN CG C N N 68
ASN OD1 O N N 69
ASN ND2 N N N 70
ASN OXT O N N 71
ASN H H N N 72
ASN H2 H N N 73
ASN HA H N N 74
ASN HB2 H N N 75
ASN HB3 H N N 76
ASN HD21 H N N 77
ASN HD22 H N N 78
ASN HXT H N N 79
ASP N N N N 80
ASP CA C N S 81
ASP C C N N 82
ASP O O N N 83
ASP CB C N N 84
ASP CG C N N 85
ASP OD1 O N N 86
ASP OD2 O N N 87
ASP OXT O N N 88
ASP H H N N 89
ASP H2 H N N 90
ASP HA H N N 91
ASP HB2 H N N 92
ASP HB3 H N N 93
ASP HD2 H N N 94
ASP HXT H N N 95
BGC C2 C N R 96
BGC C3 C N S 97
BGC C4 C N S 98
BGC C5 C N R 99
BGC C6 C N N 100
BGC C1 C N R 101
BGC O1 O N N 102
BGC O2 O N N 103
BGC O3 O N N 104
BGC O4 O N N 105
BGC O5 O N N 106
BGC O6 O N N 107
BGC H2 H N N 108
BGC H3 H N N 109
BGC H4 H N N 110
BGC H5 H N N 111
BGC H61 H N N 112
BGC H62 H N N 113
BGC H1 H N N 114
BGC HO1 H N N 115
BGC HO2 H N N 116
BGC HO3 H N N 117
BGC HO4 H N N 118
BGC HO6 H N N 119
CCS N N N N 120
CCS CA C N R 121
CCS CB C N N 122
CCS SG S N N 123
CCS CD C N N 124
CCS CE C N N 125
CCS OZ1 O N N 126
CCS OZ2 O N N 127
CCS C C N N 128
CCS O O N N 129
CCS OXT O N N 130
CCS H H N N 131
CCS H2 H N N 132
CCS HA H N N 133
CCS HB2 H N N 134
CCS HB3 H N N 135
CCS HD2 H N N 136
CCS HD3 H N N 137
CCS HZ2 H N N 138
CCS HXT H N N 139
CL CL CL N N 140
CYS N N N N 141
CYS CA C N R 142
CYS C C N N 143
CYS O O N N 144
CYS CB C N N 145
CYS SG S N N 146
CYS OXT O N N 147
CYS H H N N 148
CYS H2 H N N 149
CYS HA H N N 150
CYS HB2 H N N 151
CYS HB3 H N N 152
CYS HG H N N 153
CYS HXT H N N 154
DAL N N N N 155
DAL CA C N R 156
DAL CB C N N 157
DAL C C N N 158
DAL O O N N 159
DAL OXT O N N 160
DAL H H N N 161
DAL H2 H N N 162
DAL HA H N N 163
DAL HB1 H N N 164
DAL HB2 H N N 165
DAL HB3 H N N 166
DAL HXT H N N 167
GHP N N N N 168
GHP CA C N R 169
GHP C C N N 170
GHP O O N N 171
GHP OXT O N N 172
GHP C1 C Y N 173
GHP C2 C Y N 174
GHP C3 C Y N 175
GHP C4 C Y N 176
GHP O4 O N N 177
GHP C5 C Y N 178
GHP C6 C Y N 179
GHP H H N N 180
GHP H2 H N N 181
GHP HA H N N 182
GHP HXT H N N 183
GHP HC2 H N N 184
GHP H3 H N N 185
GHP HO4 H N N 186
GHP H5 H N N 187
GHP H6 H N N 188
GLN N N N N 189
GLN CA C N S 190
GLN C C N N 191
GLN O O N N 192
GLN CB C N N 193
GLN CG C N N 194
GLN CD C N N 195
GLN OE1 O N N 196
GLN NE2 N N N 197
GLN OXT O N N 198
GLN H H N N 199
GLN H2 H N N 200
GLN HA H N N 201
GLN HB2 H N N 202
GLN HB3 H N N 203
GLN HG2 H N N 204
GLN HG3 H N N 205
GLN HE21 H N N 206
GLN HE22 H N N 207
GLN HXT H N N 208
GLU N N N N 209
GLU CA C N S 210
GLU C C N N 211
GLU O O N N 212
GLU CB C N N 213
GLU CG C N N 214
GLU CD C N N 215
GLU OE1 O N N 216
GLU OE2 O N N 217
GLU OXT O N N 218
GLU H H N N 219
GLU H2 H N N 220
GLU HA H N N 221
GLU HB2 H N N 222
GLU HB3 H N N 223
GLU HG2 H N N 224
GLU HG3 H N N 225
GLU HE2 H N N 226
GLU HXT H N N 227
GLY N N N N 228
GLY CA C N N 229
GLY C C N N 230
GLY O O N N 231
GLY OXT O N N 232
GLY H H N N 233
GLY H2 H N N 234
GLY HA2 H N N 235
GLY HA3 H N N 236
GLY HXT H N N 237
HIS N N N N 238
HIS CA C N S 239
HIS C C N N 240
HIS O O N N 241
HIS CB C N N 242
HIS CG C Y N 243
HIS ND1 N Y N 244
HIS CD2 C Y N 245
HIS CE1 C Y N 246
HIS NE2 N Y N 247
HIS OXT O N N 248
HIS H H N N 249
HIS H2 H N N 250
HIS HA H N N 251
HIS HB2 H N N 252
HIS HB3 H N N 253
HIS HD1 H N N 254
HIS HD2 H N N 255
HIS HE1 H N N 256
HIS HE2 H N N 257
HIS HXT H N N 258
HOH O O N N 259
HOH H1 H N N 260
HOH H2 H N N 261
ILE N N N N 262
ILE CA C N S 263
ILE C C N N 264
ILE O O N N 265
ILE CB C N S 266
ILE CG1 C N N 267
ILE CG2 C N N 268
ILE CD1 C N N 269
ILE OXT O N N 270
ILE H H N N 271
ILE H2 H N N 272
ILE HA H N N 273
ILE HB H N N 274
ILE HG12 H N N 275
ILE HG13 H N N 276
ILE HG21 H N N 277
ILE HG22 H N N 278
ILE HG23 H N N 279
ILE HD11 H N N 280
ILE HD12 H N N 281
ILE HD13 H N N 282
ILE HXT H N N 283
IPA C1 C N N 284
IPA C2 C N N 285
IPA C3 C N N 286
IPA O2 O N N 287
IPA H11 H N N 288
IPA H12 H N N 289
IPA H13 H N N 290
IPA H2 H N N 291
IPA H31 H N N 292
IPA H32 H N N 293
IPA H33 H N N 294
IPA HO2 H N N 295
LEU N N N N 296
LEU CA C N S 297
LEU C C N N 298
LEU O O N N 299
LEU CB C N N 300
LEU CG C N N 301
LEU CD1 C N N 302
LEU CD2 C N N 303
LEU OXT O N N 304
LEU H H N N 305
LEU H2 H N N 306
LEU HA H N N 307
LEU HB2 H N N 308
LEU HB3 H N N 309
LEU HG H N N 310
LEU HD11 H N N 311
LEU HD12 H N N 312
LEU HD13 H N N 313
LEU HD21 H N N 314
LEU HD22 H N N 315
LEU HD23 H N N 316
LEU HXT H N N 317
LYS N N N N 318
LYS CA C N S 319
LYS C C N N 320
LYS O O N N 321
LYS CB C N N 322
LYS CG C N N 323
LYS CD C N N 324
LYS CE C N N 325
LYS NZ N N N 326
LYS OXT O N N 327
LYS H H N N 328
LYS H2 H N N 329
LYS HA H N N 330
LYS HB2 H N N 331
LYS HB3 H N N 332
LYS HG2 H N N 333
LYS HG3 H N N 334
LYS HD2 H N N 335
LYS HD3 H N N 336
LYS HE2 H N N 337
LYS HE3 H N N 338
LYS HZ1 H N N 339
LYS HZ2 H N N 340
LYS HZ3 H N N 341
LYS HXT H N N 342
MET N N N N 343
MET CA C N S 344
MET C C N N 345
MET O O N N 346
MET CB C N N 347
MET CG C N N 348
MET SD S N N 349
MET CE C N N 350
MET OXT O N N 351
MET H H N N 352
MET H2 H N N 353
MET HA H N N 354
MET HB2 H N N 355
MET HB3 H N N 356
MET HG2 H N N 357
MET HG3 H N N 358
MET HE1 H N N 359
MET HE2 H N N 360
MET HE3 H N N 361
MET HXT H N N 362
MLU N N N N 363
MLU CN C N N 364
MLU CA C N R 365
MLU C C N N 366
MLU O O N N 367
MLU CB C N N 368
MLU CG C N N 369
MLU CD1 C N N 370
MLU CD2 C N N 371
MLU OXT O N N 372
MLU H H N N 373
MLU HCN1 H N N 374
MLU HCN2 H N N 375
MLU HCN3 H N N 376
MLU HA H N N 377
MLU HB2 H N N 378
MLU HB3 H N N 379
MLU HXT H N N 380
MLU HG H N N 381
MLU HD11 H N N 382
MLU HD12 H N N 383
MLU HD13 H N N 384
MLU HD21 H N N 385
MLU HD22 H N N 386
MLU HD23 H N N 387
MPD C1 C N N 388
MPD C2 C N N 389
MPD O2 O N N 390
MPD CM C N N 391
MPD C3 C N N 392
MPD C4 C N S 393
MPD O4 O N N 394
MPD C5 C N N 395
MPD H11 H N N 396
MPD H12 H N N 397
MPD H13 H N N 398
MPD HO2 H N N 399
MPD HM1 H N N 400
MPD HM2 H N N 401
MPD HM3 H N N 402
MPD H31 H N N 403
MPD H32 H N N 404
MPD H4 H N N 405
MPD HO4 H N N 406
MPD H51 H N N 407
MPD H52 H N N 408
MPD H53 H N N 409
MRD C1 C N N 410
MRD C2 C N N 411
MRD O2 O N N 412
MRD CM C N N 413
MRD C3 C N N 414
MRD C4 C N R 415
MRD O4 O N N 416
MRD C5 C N N 417
MRD H1C1 H N N 418
MRD H1C2 H N N 419
MRD H1C3 H N N 420
MRD H2 H N N 421
MRD HMC1 H N N 422
MRD HMC2 H N N 423
MRD HMC3 H N N 424
MRD H3C1 H N N 425
MRD H3C2 H N N 426
MRD H4 H N N 427
MRD HA H N N 428
MRD H5C1 H N N 429
MRD H5C2 H N N 430
MRD H5C3 H N N 431
OMY N N N N 432
OMY CA C N S 433
OMY OCZ O N N 434
OMY CE2 C Y N 435
OMY CE1 C Y N 436
OMY CZ C Y N 437
OMY CG C Y N 438
OMY CD2 C Y N 439
OMY CD1 C Y N 440
OMY CB C N R 441
OMY CL CL N N 442
OMY O O N N 443
OMY C C N N 444
OMY ODE O N N 445
OMY OXT O N N 446
OMY H H N N 447
OMY H2 H N N 448
OMY HA H N N 449
OMY HCZ H N N 450
OMY HE2 H N N 451
OMY HD2 H N N 452
OMY HD1 H N N 453
OMY HB H N N 454
OMY HXT H N N 455
OMY HDE H N N 456
OMZ N N N N 457
OMZ CA C N R 458
OMZ C C N N 459
OMZ O O N N 460
OMZ OXT O N N 461
OMZ CB C N R 462
OMZ OC O N N 463
OMZ CG C Y N 464
OMZ CD1 C Y N 465
OMZ CD2 C Y N 466
OMZ CE1 C Y N 467
OMZ CL CL N N 468
OMZ CE2 C Y N 469
OMZ CZ C Y N 470
OMZ OH O N N 471
OMZ H H N N 472
OMZ H2 H N N 473
OMZ HA H N N 474
OMZ HB H N N 475
OMZ HXT H N N 476
OMZ HC H N N 477
OMZ HD1 H N N 478
OMZ HD2 H N N 479
OMZ HE2 H N N 480
OMZ HH H N N 481
PHE N N N N 482
PHE CA C N S 483
PHE C C N N 484
PHE O O N N 485
PHE CB C N N 486
PHE CG C Y N 487
PHE CD1 C Y N 488
PHE CD2 C Y N 489
PHE CE1 C Y N 490
PHE CE2 C Y N 491
PHE CZ C Y N 492
PHE OXT O N N 493
PHE H H N N 494
PHE H2 H N N 495
PHE HA H N N 496
PHE HB2 H N N 497
PHE HB3 H N N 498
PHE HD1 H N N 499
PHE HD2 H N N 500
PHE HE1 H N N 501
PHE HE2 H N N 502
PHE HZ H N N 503
PHE HXT H N N 504
PO4 P P N N 505
PO4 O1 O N N 506
PO4 O2 O N N 507
PO4 O3 O N N 508
PO4 O4 O N N 509
PRO N N N N 510
PRO CA C N S 511
PRO C C N N 512
PRO O O N N 513
PRO CB C N N 514
PRO CG C N N 515
PRO CD C N N 516
PRO OXT O N N 517
PRO H H N N 518
PRO HA H N N 519
PRO HB2 H N N 520
PRO HB3 H N N 521
PRO HG2 H N N 522
PRO HG3 H N N 523
PRO HD2 H N N 524
PRO HD3 H N N 525
PRO HXT H N N 526
RER C1 C N R 527
RER C2 C N N 528
RER C3 C N S 529
RER N3 N N N 530
RER C3A C N N 531
RER C4 C N S 532
RER O4 O N N 533
RER C5 C N S 534
RER O5 O N N 535
RER C5A C N N 536
RER O1 O N N 537
RER H1 H N N 538
RER H21C H N N 539
RER H22C H N N 540
RER HO1 H N N 541
RER H31N H N N 542
RER H32N H N N 543
RER H3A1 H N N 544
RER H3A2 H N N 545
RER H3A3 H N N 546
RER H4 H N N 547
RER HO4 H N N 548
RER H5 H N N 549
RER H5A1 H N N 550
RER H5A2 H N N 551
RER H5A3 H N N 552
SER N N N N 553
SER CA C N S 554
SER C C N N 555
SER O O N N 556
SER CB C N N 557
SER OG O N N 558
SER OXT O N N 559
SER H H N N 560
SER H2 H N N 561
SER HA H N N 562
SER HB2 H N N 563
SER HB3 H N N 564
SER HG H N N 565
SER HXT H N N 566
THR N N N N 567
THR CA C N S 568
THR C C N N 569
THR O O N N 570
THR CB C N R 571
THR OG1 O N N 572
THR CG2 C N N 573
THR OXT O N N 574
THR H H N N 575
THR H2 H N N 576
THR HA H N N 577
THR HB H N N 578
THR HG1 H N N 579
THR HG21 H N N 580
THR HG22 H N N 581
THR HG23 H N N 582
THR HXT H N N 583
TRP N N N N 584
TRP CA C N S 585
TRP C C N N 586
TRP O O N N 587
TRP CB C N N 588
TRP CG C Y N 589
TRP CD1 C Y N 590
TRP CD2 C Y N 591
TRP NE1 N Y N 592
TRP CE2 C Y N 593
TRP CE3 C Y N 594
TRP CZ2 C Y N 595
TRP CZ3 C Y N 596
TRP CH2 C Y N 597
TRP OXT O N N 598
TRP H H N N 599
TRP H2 H N N 600
TRP HA H N N 601
TRP HB2 H N N 602
TRP HB3 H N N 603
TRP HD1 H N N 604
TRP HE1 H N N 605
TRP HE3 H N N 606
TRP HZ2 H N N 607
TRP HZ3 H N N 608
TRP HH2 H N N 609
TRP HXT H N N 610
TRS C C N N 611
TRS C1 C N N 612
TRS C2 C N N 613
TRS C3 C N N 614
TRS N N N N 615
TRS O1 O N N 616
TRS O2 O N N 617
TRS O3 O N N 618
TRS H11 H N N 619
TRS H12 H N N 620
TRS H21 H N N 621
TRS H22 H N N 622
TRS H31 H N N 623
TRS H32 H N N 624
TRS HN1 H N N 625
TRS HN2 H N N 626
TRS HN3 H N N 627
TRS HO1 H N N 628
TRS HO2 H N N 629
TRS HO3 H N N 630
TYR N N N N 631
TYR CA C N S 632
TYR C C N N 633
TYR O O N N 634
TYR CB C N N 635
TYR CG C Y N 636
TYR CD1 C Y N 637
TYR CD2 C Y N 638
TYR CE1 C Y N 639
TYR CE2 C Y N 640
TYR CZ C Y N 641
TYR OH O N N 642
TYR OXT O N N 643
TYR H H N N 644
TYR H2 H N N 645
TYR HA H N N 646
TYR HB2 H N N 647
TYR HB3 H N N 648
TYR HD1 H N N 649
TYR HD2 H N N 650
TYR HE1 H N N 651
TYR HE2 H N N 652
TYR HH H N N 653
TYR HXT H N N 654
VAL N N N N 655
VAL CA C N S 656
VAL C C N N 657
VAL O O N N 658
VAL CB C N N 659
VAL CG1 C N N 660
VAL CG2 C N N 661
VAL OXT O N N 662
VAL H H N N 663
VAL H2 H N N 664
VAL HA H N N 665
VAL HB H N N 666
VAL HG11 H N N 667
VAL HG12 H N N 668
VAL HG13 H N N 669
VAL HG21 H N N 670
VAL HG22 H N N 671
VAL HG23 H N N 672
VAL HXT H N N 673
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
3FG N CA sing N N 1
3FG OD1 CD1 sing N N 2
3FG CD1 CG1 sing Y N 3
3FG CD1 CZ doub Y N 4
3FG CG1 CB doub Y N 5
3FG CZ CD2 sing Y N 6
3FG CD2 OD2 sing N N 7
3FG CD2 CG2 doub Y N 8
3FG CG2 CB sing Y N 9
3FG CB CA sing N N 10
3FG CA C sing N N 11
3FG C O doub N N 12
3FG C OXT sing N N 13
3FG N H sing N N 14
3FG N H2 sing N N 15
3FG CA HA sing N N 16
3FG OD1 HD1 sing N N 17
3FG CG1 HG1 sing N N 18
3FG CZ HZ sing N N 19
3FG OD2 HD2 sing N N 20
3FG CG2 HG2 sing N N 21
3FG OXT HXT sing N N 22
ALA N CA sing N N 23
ALA N H sing N N 24
ALA N H2 sing N N 25
ALA CA C sing N N 26
ALA CA CB sing N N 27
ALA CA HA sing N N 28
ALA C O doub N N 29
ALA C OXT sing N N 30
ALA CB HB1 sing N N 31
ALA CB HB2 sing N N 32
ALA CB HB3 sing N N 33
ALA OXT HXT sing N N 34
ARG N CA sing N N 35
ARG N H sing N N 36
ARG N H2 sing N N 37
ARG CA C sing N N 38
ARG CA CB sing N N 39
ARG CA HA sing N N 40
ARG C O doub N N 41
ARG C OXT sing N N 42
ARG CB CG sing N N 43
ARG CB HB2 sing N N 44
ARG CB HB3 sing N N 45
ARG CG CD sing N N 46
ARG CG HG2 sing N N 47
ARG CG HG3 sing N N 48
ARG CD NE sing N N 49
ARG CD HD2 sing N N 50
ARG CD HD3 sing N N 51
ARG NE CZ sing N N 52
ARG NE HE sing N N 53
ARG CZ NH1 sing N N 54
ARG CZ NH2 doub N N 55
ARG NH1 HH11 sing N N 56
ARG NH1 HH12 sing N N 57
ARG NH2 HH21 sing N N 58
ARG NH2 HH22 sing N N 59
ARG OXT HXT sing N N 60
ASN N CA sing N N 61
ASN N H sing N N 62
ASN N H2 sing N N 63
ASN CA C sing N N 64
ASN CA CB sing N N 65
ASN CA HA sing N N 66
ASN C O doub N N 67
ASN C OXT sing N N 68
ASN CB CG sing N N 69
ASN CB HB2 sing N N 70
ASN CB HB3 sing N N 71
ASN CG OD1 doub N N 72
ASN CG ND2 sing N N 73
ASN ND2 HD21 sing N N 74
ASN ND2 HD22 sing N N 75
ASN OXT HXT sing N N 76
ASP N CA sing N N 77
ASP N H sing N N 78
ASP N H2 sing N N 79
ASP CA C sing N N 80
ASP CA CB sing N N 81
ASP CA HA sing N N 82
ASP C O doub N N 83
ASP C OXT sing N N 84
ASP CB CG sing N N 85
ASP CB HB2 sing N N 86
ASP CB HB3 sing N N 87
ASP CG OD1 doub N N 88
ASP CG OD2 sing N N 89
ASP OD2 HD2 sing N N 90
ASP OXT HXT sing N N 91
BGC C2 C3 sing N N 92
BGC C2 C1 sing N N 93
BGC C2 O2 sing N N 94
BGC C2 H2 sing N N 95
BGC C3 C4 sing N N 96
BGC C3 O3 sing N N 97
BGC C3 H3 sing N N 98
BGC C4 C5 sing N N 99
BGC C4 O4 sing N N 100
BGC C4 H4 sing N N 101
BGC C5 C6 sing N N 102
BGC C5 O5 sing N N 103
BGC C5 H5 sing N N 104
BGC C6 O6 sing N N 105
BGC C6 H61 sing N N 106
BGC C6 H62 sing N N 107
BGC C1 O1 sing N N 108
BGC C1 O5 sing N N 109
BGC C1 H1 sing N N 110
BGC O1 HO1 sing N N 111
BGC O2 HO2 sing N N 112
BGC O3 HO3 sing N N 113
BGC O4 HO4 sing N N 114
BGC O6 HO6 sing N N 115
CCS N CA sing N N 116
CCS N H sing N N 117
CCS N H2 sing N N 118
CCS CA CB sing N N 119
CCS CA C sing N N 120
CCS CA HA sing N N 121
CCS CB SG sing N N 122
CCS CB HB2 sing N N 123
CCS CB HB3 sing N N 124
CCS SG CD sing N N 125
CCS CD CE sing N N 126
CCS CD HD2 sing N N 127
CCS CD HD3 sing N N 128
CCS CE OZ1 doub N N 129
CCS CE OZ2 sing N N 130
CCS OZ2 HZ2 sing N N 131
CCS C O doub N N 132
CCS C OXT sing N N 133
CCS OXT HXT sing N N 134
CYS N CA sing N N 135
CYS N H sing N N 136
CYS N H2 sing N N 137
CYS CA C sing N N 138
CYS CA CB sing N N 139
CYS CA HA sing N N 140
CYS C O doub N N 141
CYS C OXT sing N N 142
CYS CB SG sing N N 143
CYS CB HB2 sing N N 144
CYS CB HB3 sing N N 145
CYS SG HG sing N N 146
CYS OXT HXT sing N N 147
DAL N CA sing N N 148
DAL N H sing N N 149
DAL N H2 sing N N 150
DAL CA CB sing N N 151
DAL CA C sing N N 152
DAL CA HA sing N N 153
DAL CB HB1 sing N N 154
DAL CB HB2 sing N N 155
DAL CB HB3 sing N N 156
DAL C O doub N N 157
DAL C OXT sing N N 158
DAL OXT HXT sing N N 159
GHP N CA sing N N 160
GHP N H sing N N 161
GHP N H2 sing N N 162
GHP CA C sing N N 163
GHP CA C1 sing N N 164
GHP CA HA sing N N 165
GHP C O doub N N 166
GHP C OXT sing N N 167
GHP OXT HXT sing N N 168
GHP C1 C2 doub Y N 169
GHP C1 C6 sing Y N 170
GHP C2 C3 sing Y N 171
GHP C2 HC2 sing N N 172
GHP C3 C4 doub Y N 173
GHP C3 H3 sing N N 174
GHP C4 O4 sing N N 175
GHP C4 C5 sing Y N 176
GHP O4 HO4 sing N N 177
GHP C5 C6 doub Y N 178
GHP C5 H5 sing N N 179
GHP C6 H6 sing N N 180
GLN N CA sing N N 181
GLN N H sing N N 182
GLN N H2 sing N N 183
GLN CA C sing N N 184
GLN CA CB sing N N 185
GLN CA HA sing N N 186
GLN C O doub N N 187
GLN C OXT sing N N 188
GLN CB CG sing N N 189
GLN CB HB2 sing N N 190
GLN CB HB3 sing N N 191
GLN CG CD sing N N 192
GLN CG HG2 sing N N 193
GLN CG HG3 sing N N 194
GLN CD OE1 doub N N 195
GLN CD NE2 sing N N 196
GLN NE2 HE21 sing N N 197
GLN NE2 HE22 sing N N 198
GLN OXT HXT sing N N 199
GLU N CA sing N N 200
GLU N H sing N N 201
GLU N H2 sing N N 202
GLU CA C sing N N 203
GLU CA CB sing N N 204
GLU CA HA sing N N 205
GLU C O doub N N 206
GLU C OXT sing N N 207
GLU CB CG sing N N 208
GLU CB HB2 sing N N 209
GLU CB HB3 sing N N 210
GLU CG CD sing N N 211
GLU CG HG2 sing N N 212
GLU CG HG3 sing N N 213
GLU CD OE1 doub N N 214
GLU CD OE2 sing N N 215
GLU OE2 HE2 sing N N 216
GLU OXT HXT sing N N 217
GLY N CA sing N N 218
GLY N H sing N N 219
GLY N H2 sing N N 220
GLY CA C sing N N 221
GLY CA HA2 sing N N 222
GLY CA HA3 sing N N 223
GLY C O doub N N 224
GLY C OXT sing N N 225
GLY OXT HXT sing N N 226
HIS N CA sing N N 227
HIS N H sing N N 228
HIS N H2 sing N N 229
HIS CA C sing N N 230
HIS CA CB sing N N 231
HIS CA HA sing N N 232
HIS C O doub N N 233
HIS C OXT sing N N 234
HIS CB CG sing N N 235
HIS CB HB2 sing N N 236
HIS CB HB3 sing N N 237
HIS CG ND1 sing Y N 238
HIS CG CD2 doub Y N 239
HIS ND1 CE1 doub Y N 240
HIS ND1 HD1 sing N N 241
HIS CD2 NE2 sing Y N 242
HIS CD2 HD2 sing N N 243
HIS CE1 NE2 sing Y N 244
HIS CE1 HE1 sing N N 245
HIS NE2 HE2 sing N N 246
HIS OXT HXT sing N N 247
HOH O H1 sing N N 248
HOH O H2 sing N N 249
ILE N CA sing N N 250
ILE N H sing N N 251
ILE N H2 sing N N 252
ILE CA C sing N N 253
ILE CA CB sing N N 254
ILE CA HA sing N N 255
ILE C O doub N N 256
ILE C OXT sing N N 257
ILE CB CG1 sing N N 258
ILE CB CG2 sing N N 259
ILE CB HB sing N N 260
ILE CG1 CD1 sing N N 261
ILE CG1 HG12 sing N N 262
ILE CG1 HG13 sing N N 263
ILE CG2 HG21 sing N N 264
ILE CG2 HG22 sing N N 265
ILE CG2 HG23 sing N N 266
ILE CD1 HD11 sing N N 267
ILE CD1 HD12 sing N N 268
ILE CD1 HD13 sing N N 269
ILE OXT HXT sing N N 270
IPA C1 C2 sing N N 271
IPA C1 H11 sing N N 272
IPA C1 H12 sing N N 273
IPA C1 H13 sing N N 274
IPA C2 C3 sing N N 275
IPA C2 O2 sing N N 276
IPA C2 H2 sing N N 277
IPA C3 H31 sing N N 278
IPA C3 H32 sing N N 279
IPA C3 H33 sing N N 280
IPA O2 HO2 sing N N 281
LEU N CA sing N N 282
LEU N H sing N N 283
LEU N H2 sing N N 284
LEU CA C sing N N 285
LEU CA CB sing N N 286
LEU CA HA sing N N 287
LEU C O doub N N 288
LEU C OXT sing N N 289
LEU CB CG sing N N 290
LEU CB HB2 sing N N 291
LEU CB HB3 sing N N 292
LEU CG CD1 sing N N 293
LEU CG CD2 sing N N 294
LEU CG HG sing N N 295
LEU CD1 HD11 sing N N 296
LEU CD1 HD12 sing N N 297
LEU CD1 HD13 sing N N 298
LEU CD2 HD21 sing N N 299
LEU CD2 HD22 sing N N 300
LEU CD2 HD23 sing N N 301
LEU OXT HXT sing N N 302
LYS N CA sing N N 303
LYS N H sing N N 304
LYS N H2 sing N N 305
LYS CA C sing N N 306
LYS CA CB sing N N 307
LYS CA HA sing N N 308
LYS C O doub N N 309
LYS C OXT sing N N 310
LYS CB CG sing N N 311
LYS CB HB2 sing N N 312
LYS CB HB3 sing N N 313
LYS CG CD sing N N 314
LYS CG HG2 sing N N 315
LYS CG HG3 sing N N 316
LYS CD CE sing N N 317
LYS CD HD2 sing N N 318
LYS CD HD3 sing N N 319
LYS CE NZ sing N N 320
LYS CE HE2 sing N N 321
LYS CE HE3 sing N N 322
LYS NZ HZ1 sing N N 323
LYS NZ HZ2 sing N N 324
LYS NZ HZ3 sing N N 325
LYS OXT HXT sing N N 326
MET N CA sing N N 327
MET N H sing N N 328
MET N H2 sing N N 329
MET CA C sing N N 330
MET CA CB sing N N 331
MET CA HA sing N N 332
MET C O doub N N 333
MET C OXT sing N N 334
MET CB CG sing N N 335
MET CB HB2 sing N N 336
MET CB HB3 sing N N 337
MET CG SD sing N N 338
MET CG HG2 sing N N 339
MET CG HG3 sing N N 340
MET SD CE sing N N 341
MET CE HE1 sing N N 342
MET CE HE2 sing N N 343
MET CE HE3 sing N N 344
MET OXT HXT sing N N 345
MLU N CN sing N N 346
MLU N CA sing N N 347
MLU CA C sing N N 348
MLU CA CB sing N N 349
MLU C O doub N N 350
MLU C OXT sing N N 351
MLU CB CG sing N N 352
MLU CG CD1 sing N N 353
MLU CG CD2 sing N N 354
MLU N H sing N N 355
MLU CN HCN1 sing N N 356
MLU CN HCN2 sing N N 357
MLU CN HCN3 sing N N 358
MLU CA HA sing N N 359
MLU CB HB2 sing N N 360
MLU CB HB3 sing N N 361
MLU OXT HXT sing N N 362
MLU CG HG sing N N 363
MLU CD1 HD11 sing N N 364
MLU CD1 HD12 sing N N 365
MLU CD1 HD13 sing N N 366
MLU CD2 HD21 sing N N 367
MLU CD2 HD22 sing N N 368
MLU CD2 HD23 sing N N 369
MPD C1 C2 sing N N 370
MPD C1 H11 sing N N 371
MPD C1 H12 sing N N 372
MPD C1 H13 sing N N 373
MPD C2 O2 sing N N 374
MPD C2 CM sing N N 375
MPD C2 C3 sing N N 376
MPD O2 HO2 sing N N 377
MPD CM HM1 sing N N 378
MPD CM HM2 sing N N 379
MPD CM HM3 sing N N 380
MPD C3 C4 sing N N 381
MPD C3 H31 sing N N 382
MPD C3 H32 sing N N 383
MPD C4 O4 sing N N 384
MPD C4 C5 sing N N 385
MPD C4 H4 sing N N 386
MPD O4 HO4 sing N N 387
MPD C5 H51 sing N N 388
MPD C5 H52 sing N N 389
MPD C5 H53 sing N N 390
MRD C1 C2 sing N N 391
MRD C1 H1C1 sing N N 392
MRD C1 H1C2 sing N N 393
MRD C1 H1C3 sing N N 394
MRD C2 O2 sing N N 395
MRD C2 CM sing N N 396
MRD C2 C3 sing N N 397
MRD O2 H2 sing N N 398
MRD CM HMC1 sing N N 399
MRD CM HMC2 sing N N 400
MRD CM HMC3 sing N N 401
MRD C3 C4 sing N N 402
MRD C3 H3C1 sing N N 403
MRD C3 H3C2 sing N N 404
MRD C4 O4 sing N N 405
MRD C4 C5 sing N N 406
MRD C4 H4 sing N N 407
MRD O4 HA sing N N 408
MRD C5 H5C1 sing N N 409
MRD C5 H5C2 sing N N 410
MRD C5 H5C3 sing N N 411
OMY N CA sing N N 412
OMY OCZ CZ sing N N 413
OMY CZ CE2 sing Y N 414
OMY CZ CE1 doub Y N 415
OMY CE2 CD2 doub Y N 416
OMY CD2 CG sing Y N 417
OMY CG CD1 doub Y N 418
OMY CG CB sing N N 419
OMY CD1 CE1 sing Y N 420
OMY CE1 CL sing N N 421
OMY C O doub N N 422
OMY C CA sing N N 423
OMY C OXT sing N N 424
OMY CA CB sing N N 425
OMY CB ODE sing N N 426
OMY N H sing N N 427
OMY N H2 sing N N 428
OMY CA HA sing N N 429
OMY OCZ HCZ sing N N 430
OMY CE2 HE2 sing N N 431
OMY CD2 HD2 sing N N 432
OMY CD1 HD1 sing N N 433
OMY CB HB sing N N 434
OMY OXT HXT sing N N 435
OMY ODE HDE sing N N 436
OMZ N CA sing N N 437
OMZ CA C sing N N 438
OMZ CA CB sing N N 439
OMZ C O doub N N 440
OMZ C OXT sing N N 441
OMZ CL CE1 sing N N 442
OMZ CB OC sing N N 443
OMZ CB CG sing N N 444
OMZ CG CD1 doub Y N 445
OMZ CG CD2 sing Y N 446
OMZ CD1 CE1 sing Y N 447
OMZ CD2 CE2 doub Y N 448
OMZ CE1 CZ doub Y N 449
OMZ CE2 CZ sing Y N 450
OMZ CZ OH sing N N 451
OMZ N H sing N N 452
OMZ N H2 sing N N 453
OMZ CA HA sing N N 454
OMZ CB HB sing N N 455
OMZ OXT HXT sing N N 456
OMZ OC HC sing N N 457
OMZ CD1 HD1 sing N N 458
OMZ CD2 HD2 sing N N 459
OMZ CE2 HE2 sing N N 460
OMZ OH HH sing N N 461
PHE N CA sing N N 462
PHE N H sing N N 463
PHE N H2 sing N N 464
PHE CA C sing N N 465
PHE CA CB sing N N 466
PHE CA HA sing N N 467
PHE C O doub N N 468
PHE C OXT sing N N 469
PHE CB CG sing N N 470
PHE CB HB2 sing N N 471
PHE CB HB3 sing N N 472
PHE CG CD1 doub Y N 473
PHE CG CD2 sing Y N 474
PHE CD1 CE1 sing Y N 475
PHE CD1 HD1 sing N N 476
PHE CD2 CE2 doub Y N 477
PHE CD2 HD2 sing N N 478
PHE CE1 CZ doub Y N 479
PHE CE1 HE1 sing N N 480
PHE CE2 CZ sing Y N 481
PHE CE2 HE2 sing N N 482
PHE CZ HZ sing N N 483
PHE OXT HXT sing N N 484
PO4 P O1 doub N N 485
PO4 P O2 sing N N 486
PO4 P O3 sing N N 487
PO4 P O4 sing N N 488
PRO N CA sing N N 489
PRO N CD sing N N 490
PRO N H sing N N 491
PRO CA C sing N N 492
PRO CA CB sing N N 493
PRO CA HA sing N N 494
PRO C O doub N N 495
PRO C OXT sing N N 496
PRO CB CG sing N N 497
PRO CB HB2 sing N N 498
PRO CB HB3 sing N N 499
PRO CG CD sing N N 500
PRO CG HG2 sing N N 501
PRO CG HG3 sing N N 502
PRO CD HD2 sing N N 503
PRO CD HD3 sing N N 504
PRO OXT HXT sing N N 505
RER C1 C2 sing N N 506
RER C1 O5 sing N N 507
RER C1 O1 sing N N 508
RER C2 C3 sing N N 509
RER C3 N3 sing N N 510
RER C3 C3A sing N N 511
RER C3 C4 sing N N 512
RER C4 O4 sing N N 513
RER C4 C5 sing N N 514
RER C5 O5 sing N N 515
RER C5 C5A sing N N 516
RER C1 H1 sing N N 517
RER C2 H21C sing N N 518
RER C2 H22C sing N N 519
RER O1 HO1 sing N N 520
RER N3 H31N sing N N 521
RER N3 H32N sing N N 522
RER C3A H3A1 sing N N 523
RER C3A H3A2 sing N N 524
RER C3A H3A3 sing N N 525
RER C4 H4 sing N N 526
RER O4 HO4 sing N N 527
RER C5 H5 sing N N 528
RER C5A H5A1 sing N N 529
RER C5A H5A2 sing N N 530
RER C5A H5A3 sing N N 531
SER N CA sing N N 532
SER N H sing N N 533
SER N H2 sing N N 534
SER CA C sing N N 535
SER CA CB sing N N 536
SER CA HA sing N N 537
SER C O doub N N 538
SER C OXT sing N N 539
SER CB OG sing N N 540
SER CB HB2 sing N N 541
SER CB HB3 sing N N 542
SER OG HG sing N N 543
SER OXT HXT sing N N 544
THR N CA sing N N 545
THR N H sing N N 546
THR N H2 sing N N 547
THR CA C sing N N 548
THR CA CB sing N N 549
THR CA HA sing N N 550
THR C O doub N N 551
THR C OXT sing N N 552
THR CB OG1 sing N N 553
THR CB CG2 sing N N 554
THR CB HB sing N N 555
THR OG1 HG1 sing N N 556
THR CG2 HG21 sing N N 557
THR CG2 HG22 sing N N 558
THR CG2 HG23 sing N N 559
THR OXT HXT sing N N 560
TRP N CA sing N N 561
TRP N H sing N N 562
TRP N H2 sing N N 563
TRP CA C sing N N 564
TRP CA CB sing N N 565
TRP CA HA sing N N 566
TRP C O doub N N 567
TRP C OXT sing N N 568
TRP CB CG sing N N 569
TRP CB HB2 sing N N 570
TRP CB HB3 sing N N 571
TRP CG CD1 doub Y N 572
TRP CG CD2 sing Y N 573
TRP CD1 NE1 sing Y N 574
TRP CD1 HD1 sing N N 575
TRP CD2 CE2 doub Y N 576
TRP CD2 CE3 sing Y N 577
TRP NE1 CE2 sing Y N 578
TRP NE1 HE1 sing N N 579
TRP CE2 CZ2 sing Y N 580
TRP CE3 CZ3 doub Y N 581
TRP CE3 HE3 sing N N 582
TRP CZ2 CH2 doub Y N 583
TRP CZ2 HZ2 sing N N 584
TRP CZ3 CH2 sing Y N 585
TRP CZ3 HZ3 sing N N 586
TRP CH2 HH2 sing N N 587
TRP OXT HXT sing N N 588
TRS C C1 sing N N 589
TRS C C2 sing N N 590
TRS C C3 sing N N 591
TRS C N sing N N 592
TRS C1 O1 sing N N 593
TRS C1 H11 sing N N 594
TRS C1 H12 sing N N 595
TRS C2 O2 sing N N 596
TRS C2 H21 sing N N 597
TRS C2 H22 sing N N 598
TRS C3 O3 sing N N 599
TRS C3 H31 sing N N 600
TRS C3 H32 sing N N 601
TRS N HN1 sing N N 602
TRS N HN2 sing N N 603
TRS N HN3 sing N N 604
TRS O1 HO1 sing N N 605
TRS O2 HO2 sing N N 606
TRS O3 HO3 sing N N 607
TYR N CA sing N N 608
TYR N H sing N N 609
TYR N H2 sing N N 610
TYR CA C sing N N 611
TYR CA CB sing N N 612
TYR CA HA sing N N 613
TYR C O doub N N 614
TYR C OXT sing N N 615
TYR CB CG sing N N 616
TYR CB HB2 sing N N 617
TYR CB HB3 sing N N 618
TYR CG CD1 doub Y N 619
TYR CG CD2 sing Y N 620
TYR CD1 CE1 sing Y N 621
TYR CD1 HD1 sing N N 622
TYR CD2 CE2 doub Y N 623
TYR CD2 HD2 sing N N 624
TYR CE1 CZ doub Y N 625
TYR CE1 HE1 sing N N 626
TYR CE2 CZ sing Y N 627
TYR CE2 HE2 sing N N 628
TYR CZ OH sing N N 629
TYR OH HH sing N N 630
TYR OXT HXT sing N N 631
VAL N CA sing N N 632
VAL N H sing N N 633
VAL N H2 sing N N 634
VAL CA C sing N N 635
VAL CA CB sing N N 636
VAL CA HA sing N N 637
VAL C O doub N N 638
VAL C OXT sing N N 639
VAL CB CG1 sing N N 640
VAL CB CG2 sing N N 641
VAL CB HB sing N N 642
VAL CG1 HG11 sing N N 643
VAL CG1 HG12 sing N N 644
VAL CG1 HG13 sing N N 645
VAL CG2 HG21 sing N N 646
VAL CG2 HG22 sing N N 647
VAL CG2 HG23 sing N N 648
VAL OXT HXT sing N N 649
#
loop_
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_mon_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.hetero
C 3 BGC 1 C BGC 1 B BGC 8 n
C 3 RER 2 C RER 2 B RER 9 n
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
BGC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpb
BGC 'COMMON NAME' GMML 1.0 b-D-glucopyranose
BGC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Glcp
BGC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc
#
_pdbx_entity_branch.entity_id 3
_pdbx_entity_branch.type oligosaccharide
#
loop_
_pdbx_entity_branch_descriptor.ordinal
_pdbx_entity_branch_descriptor.entity_id
_pdbx_entity_branch_descriptor.descriptor
_pdbx_entity_branch_descriptor.type
_pdbx_entity_branch_descriptor.program
_pdbx_entity_branch_descriptor.program_version
1 3 'WURCS=2.0/2,2,1/[a2122h-1b_1-5][ad621m-1a_1-5_3*C_3*N]/1-2/a2-b1' WURCS PDB2Glycan 1.1.0
2 3 '[][D-1-deoxy-Glcp]{[(2+1)][a-L-2-deoxy-Fucp3N]{}}' LINUCS PDB-CARE ?
#
_pdbx_entity_branch_link.link_id 1
_pdbx_entity_branch_link.entity_id 3
_pdbx_entity_branch_link.entity_branch_list_num_1 2
_pdbx_entity_branch_link.comp_id_1 RER
_pdbx_entity_branch_link.atom_id_1 C1
_pdbx_entity_branch_link.leaving_atom_id_1 O1
_pdbx_entity_branch_link.entity_branch_list_num_2 1
_pdbx_entity_branch_link.comp_id_2 BGC
_pdbx_entity_branch_link.atom_id_2 O2
_pdbx_entity_branch_link.leaving_atom_id_2 HO2
_pdbx_entity_branch_link.value_order sing
_pdbx_entity_branch_link.details ?
#
loop_
_pdbx_entity_branch_list.entity_id
_pdbx_entity_branch_list.comp_id
_pdbx_entity_branch_list.num
_pdbx_entity_branch_list.hetero
3 BGC 1 n
3 RER 2 n
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
4 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD
5 '(4R)-2-METHYLPENTANE-2,4-DIOL' MRD
6 'PHOSPHATE ION' PO4
7 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL TRS
8 'CHLORIDE ION' CL
9 'ISOPROPYL ALCOHOL' IPA
10 water HOH
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 2LZM
_pdbx_initial_refinement_model.details ?
#