HEADER PLANT PROTEIN 09-MAY-11 3RWS OBSLTE 20-MAR-13 3RWS 4JHG TITLE CRYSTAL STRUCTURE OF MEDICAGO TRUNCATULA NODULIN 13 (MTN13) IN COMPLEX TITLE 2 WITH TRANS-ZEATIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: MTN13 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MEDICAGO TRUNCATULA; SOURCE 3 ORGANISM_COMMON: BARREL MEDIC; SOURCE 4 ORGANISM_TAXID: 3880; SOURCE 5 GENE: MTN13; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET TOPO 151D KEYWDS ZEATIN, CYTOKININ, HORMONE, LUCERNE, MEDICAGO, NODULIN, NODULATION, KEYWDS 2 PLANT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.RUSZKOWSKI,K.TUSNIO,A.CIESIELSKA,K.BRZEZINSKI,M.DAUTER,Z.DAUTER, AUTHOR 2 M.SIKORSKI,M.JASKOLSKI REVDAT 2 20-MAR-13 3RWS 1 OBSLTE REVDAT 1 23-MAY-12 3RWS 0 JRNL AUTH M.RUSZKOWSKI,K.TUSNIO,A.CIESIELSKA,K.BRZEZINSKI,M.DAUTER, JRNL AUTH 2 Z.DAUTER,M.SIKORSKI,M.JASKOLSKI JRNL TITL CRYSTAL STRUCTURE OF MEDICAGO TRUNCATULA NODULIN 13 (MTN13) JRNL TITL 2 IN COMPLEX WITH TRANS-ZEATIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH H.FERNANDES,O.PASTERNAK,G.BUJACZ,A.BUJACZ,M.M.SIKORSKI, REMARK 1 AUTH 2 M.JASKOLSKI REMARK 1 TITL LUPINUS LUTEUS PATHOGENESIS-RELATED PROTEIN AS A RESERVOIR REMARK 1 TITL 2 FOR CYTOKININ. REMARK 1 REF J.MOL.BIOL. V. 378 1040 2008 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 18406424 REMARK 1 DOI 10.1016/J.JMB.2008.03.027 REMARK 1 REFERENCE 2 REMARK 1 AUTH H.FERNANDES,A.BUJACZ,G.BUJACZ,F.JELEN,M.JASINSKI, REMARK 1 AUTH 2 P.KACHLICKI,J.OTLEWSKI,M.M.SIKORSKI,M.JASKOLSKI REMARK 1 TITL CYTOKININ-INDUCED STRUCTURAL ADAPTABILITY OF A LUPINUS REMARK 1 TITL 2 LUTEUS PR-10 PROTEIN. REMARK 1 REF FEBS J. V. 276 1596 2009 REMARK 1 REFN ISSN 1742-464X REMARK 1 PMID 19220853 REMARK 1 DOI 10.1111/J.1742-4658.2009.06892.X REMARK 1 REFERENCE 3 REMARK 1 AUTH O.PASTERNAK,G.D.BUJACZ,Y.FUJIMOTO,Y.HASHIMOTO,F.JELEN, REMARK 1 AUTH 2 J.OTLEWSKI,M.M.SIKORSKI,M.JASKOLSKI REMARK 1 TITL CRYSTAL STRUCTURE OF VIGNA RADIATA CYTOKININ-SPECIFIC REMARK 1 TITL 2 BINDING PROTEIN IN COMPLEX WITH ZEATIN. REMARK 1 REF PLANT CELL V. 18 2622 2006 REMARK 1 REFN ISSN 1040-4651 REMARK 1 PMID 16998071 REMARK 1 DOI 10.1105/TPC.105.037119 REMARK 1 REFERENCE 4 REMARK 1 AUTH K.MICHALSKA,H.FERNANDES,M.SIKORSKI,M.JASKOLSKI REMARK 1 TITL CRYSTAL STRUCTURE OF HYP-1, A ST. JOHN'S WORT PROTEIN REMARK 1 TITL 2 IMPLICATED IN THE BIOSYNTHESIS OF HYPERICIN. REMARK 1 REF J.STRUCT.BIOL. V. 169 161 2010 REMARK 1 REFN ISSN 1047-8477 REMARK 1 PMID 19853038 REMARK 1 DOI 10.1016/J.JSB.2009.10.008 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 25482 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1349 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1822 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.38 REMARK 3 BIN R VALUE (WORKING SET) : 0.2710 REMARK 3 BIN FREE R VALUE SET COUNT : 99 REMARK 3 BIN FREE R VALUE : 0.2630 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1282 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 124 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.29000 REMARK 3 B22 (A**2) : 1.29000 REMARK 3 B33 (A**2) : -1.94000 REMARK 3 B12 (A**2) : 0.65000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.100 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.104 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.075 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.443 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1350 ; 0.023 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 918 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1828 ; 1.890 ; 2.005 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2257 ; 1.314 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 168 ; 6.481 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 59 ;36.914 ;25.254 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 235 ;14.852 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 4 ;22.076 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 201 ; 0.172 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1493 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 263 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 817 ; 1.317 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 334 ; 0.350 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1329 ; 2.440 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 533 ; 3.494 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 496 ; 5.910 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -4 A 158 REMARK 3 RESIDUE RANGE : A 164 A 166 REMARK 3 RESIDUE RANGE : A 167 A 290 REMARK 3 ORIGIN FOR THE GROUP (A): 5.5573 38.0614 43.4798 REMARK 3 T TENSOR REMARK 3 T11: 0.0104 T22: 0.2008 REMARK 3 T33: 0.0796 T12: -0.0154 REMARK 3 T13: -0.0129 T23: 0.0053 REMARK 3 L TENSOR REMARK 3 L11: 0.8917 L22: 0.3776 REMARK 3 L33: 0.4179 L12: -0.0468 REMARK 3 L13: -0.4933 L23: 0.2553 REMARK 3 S TENSOR REMARK 3 S11: 0.0293 S12: -0.0303 S13: -0.1200 REMARK 3 S21: -0.0293 S22: -0.0640 S23: -0.0651 REMARK 3 S31: -0.0112 S32: -0.1427 S33: 0.0347 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3RWS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-MAY-11. REMARK 100 THE RCSB ID CODE IS RCSB065473. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : FOCUSING MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26831 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 10.500 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.130 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2QIM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.9 M SODIUM MALONATE, PH 7.0, 200 MM REMARK 280 NACL, 50 MM TRIS-HCL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.49600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 37.74800 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 75.49600 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 37.74800 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 75.49600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 37.74800 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 75.49600 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 37.74800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -70.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 48.05500 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 83.23370 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 75.49600 REMARK 350 BIOMT1 4 0.500000 -0.866025 0.000000 48.05500 REMARK 350 BIOMT2 4 -0.866025 -0.500000 0.000000 83.23370 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 75.49600 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 113.24400 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 48.05500 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 83.23370 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 159 REMARK 465 LYS A 160 REMARK 465 ASP A 161 REMARK 465 SER A 162 REMARK 465 ASN A 163 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 180 O HOH A 180 10665 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 38 -43.21 -132.68 REMARK 500 ASP A 62 45.34 -82.49 REMARK 500 GLU A 109 4.05 -62.37 REMARK 500 GLU A 110 15.62 59.12 REMARK 500 PRO A 156 -17.37 -45.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 166 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 213 O REMARK 620 2 HOH A 211 O 97.3 REMARK 620 3 HOH A 214 O 105.2 81.0 REMARK 620 4 PHE A 59 O 92.1 168.3 103.2 REMARK 620 5 GLY A 61 O 97.0 79.9 152.4 92.1 REMARK 620 6 HOH A 212 O 166.7 79.7 61.6 92.6 95.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZEA A 164 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLI A 165 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 166 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2QIM RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PATHOGENESIS-RELATED PROTEIN LLPR- REMARK 900 10.2B FROM YELLOW LUPINE IN COMPLEX WITH CYTOKININ REMARK 900 RELATED ID: 1XDF RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PATHOGENESIS-RELATED PROTEIN LLPR- REMARK 900 10.2A FROM YELLOW LUPINE REMARK 900 RELATED ID: 2FLH RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CYTOKININ-SPECIFIC BINDING PROTEIN REMARK 900 FROM MUNG BEAN IN COMPLEX WITH CYTOKININ REMARK 900 RELATED ID: 1IFV RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PATHOGENESIS-RELATED PROTEIN LLPR10.1B REMARK 900 FROM YELLOW LUPINE REMARK 900 RELATED ID: 1ICX RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PATHOGENESIS-RELATED PROTEIN LLPR10.1A REMARK 900 FROM YELLOW LUPINE REMARK 900 RELATED ID: 3EI5 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HYP-1 PROTEIN FROM HYPERICUM REMARK 900 PERFORATUM (ST JOHN'S WORT) INVOLVED IN HYPERICIN REMARK 900 BIOSYNTHESIS DBREF 3RWS A 1 163 UNP P93330 P93330_MEDTR 1 163 SEQADV 3RWS ILE A -4 UNP P93330 EXPRESSION TAG SEQADV 3RWS ASP A -3 UNP P93330 EXPRESSION TAG SEQADV 3RWS PRO A -2 UNP P93330 EXPRESSION TAG SEQADV 3RWS PHE A -1 UNP P93330 EXPRESSION TAG SEQADV 3RWS THR A 0 UNP P93330 EXPRESSION TAG SEQRES 1 A 168 ILE ASP PRO PHE THR MET GLY VAL ILE THR SER GLU SER SEQRES 2 A 168 GLU TYR VAL SER SER LEU SER ALA GLU LYS LEU TYR ARG SEQRES 3 A 168 GLY ILE VAL GLU ASP GLY ASN ILE ILE TYR PRO LYS ALA SEQRES 4 A 168 LEU PRO ARG PHE ILE GLU LYS ALA GLU THR LEU GLU GLY SEQRES 5 A 168 ASP GLY GLY PRO GLY THR ILE LYS LYS LEU THR PHE VAL SEQRES 6 A 168 GLY ASP PHE GLY SER THR LYS GLN HIS ILE ASP MET VAL SEQRES 7 A 168 ASP ARG GLU ASN CYS ALA TYR THR TYR SER VAL TYR GLU SEQRES 8 A 168 GLY ILE ALA LEU SER ASP GLN PRO LEU GLU LYS ILE VAL SEQRES 9 A 168 PHE GLU PHE LYS LEU VAL PRO THR PRO GLU GLU GLY CYS SEQRES 10 A 168 ILE VAL LYS SER THR THR LYS TYR TYR THR LYS GLY ASP SEQRES 11 A 168 ASP ILE GLU LEU SER LYS ASP TYR LEU GLU ALA GLY ILE SEQRES 12 A 168 GLU ARG PHE GLU GLY PHE THR LYS ALA VAL GLU SER PHE SEQRES 13 A 168 LEU LEU ALA ASN PRO ASP TYR ASN LYS ASP SER ASN HET ZEA A 164 16 HET MLI A 165 7 HET NA A 166 1 HETNAM ZEA (2E)-2-METHYL-4-(9H-PURIN-6-YLAMINO)BUT-2-EN-1-OL HETNAM MLI MALONATE ION HETNAM NA SODIUM ION HETSYN ZEA TRANS-ZEATIN FORMUL 2 ZEA C10 H13 N5 O FORMUL 3 MLI C3 H2 O4 2- FORMUL 4 NA NA 1+ FORMUL 5 HOH *124(H2 O) HELIX 1 1 SER A 15 GLU A 25 1 11 HELIX 2 2 ASP A 26 LEU A 35 1 10 HELIX 3 3 SER A 130 ASN A 155 1 26 SHEET 1 A 7 VAL A 3 SER A 12 0 SHEET 2 A 7 CYS A 112 THR A 122 -1 O VAL A 114 N TYR A 10 SHEET 3 A 7 LEU A 95 PRO A 106 -1 N VAL A 105 O ILE A 113 SHEET 4 A 7 ALA A 79 VAL A 84 -1 N TYR A 82 O PHE A 100 SHEET 5 A 7 SER A 65 ASP A 74 -1 N ASP A 71 O THR A 81 SHEET 6 A 7 ILE A 54 PHE A 59 -1 N LEU A 57 O THR A 66 SHEET 7 A 7 ILE A 39 GLU A 46 -1 N LEU A 45 O ILE A 54 LINK NA NA A 166 O HOH A 213 1555 1555 2.23 LINK NA NA A 166 O HOH A 211 1555 1555 2.38 LINK NA NA A 166 O HOH A 214 1555 1555 2.39 LINK O PHE A 59 NA NA A 166 1555 1555 2.41 LINK O GLY A 61 NA NA A 166 1555 1555 2.43 LINK NA NA A 166 O HOH A 212 1555 1555 2.90 SITE 1 AC1 11 GLY A 61 ASP A 62 THR A 66 GLN A 68 SITE 2 AC1 11 TYR A 82 ILE A 98 PHE A 100 TYR A 133 SITE 3 AC1 11 GLY A 137 ARG A 140 PHE A 141 SITE 1 AC2 6 GLU A 86 GLY A 87 ILE A 88 ALA A 89 SITE 2 AC2 6 HOH A 252 HOH A 256 SITE 1 AC3 6 PHE A 59 GLY A 61 HOH A 211 HOH A 212 SITE 2 AC3 6 HOH A 213 HOH A 214 CRYST1 96.110 96.110 113.244 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010405 0.006007 0.000000 0.00000 SCALE2 0.000000 0.012014 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008830 0.00000