data_3S0D # _entry.id 3S0D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3S0D pdb_00003s0d 10.2210/pdb3s0d/pdb RCSB RCSB065601 ? ? WWPDB D_1000065601 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3RZS 'Apis mellifera OBP14 in complex with Ta6Br14' unspecified PDB 3S0A 'Apis mellifera OBP14, native apo-protein' unspecified PDB 3S0B 'Apis mellifera OBP14 in complex with the fluorescent probe 1-N-phenylnaphthylamine' unspecified PDB 3S0E 'Apis mellifera OBP14 in complex with the odorant eugenol' unspecified PDB 3S0F 'Apis mellifera OBP14, native apo, crystal form 2' unspecified PDB 3S0G 'Apis mellifera OBP 14 double mutant Gln44Cys, His97Cys' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3S0D _pdbx_database_status.recvd_initial_deposition_date 2011-05-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Spinelli, S.' 1 'Lagarde, A.' 2 'Iovinella, I.' 3 'Tegoni, M.' 4 'Pelosi, P.' 5 'Cambillau, C.' 6 # _citation.id primary _citation.title 'Crystal structure of Apis mellifera OBP14, a C-minus odorant-binding protein, and its complexes with odorant molecules.' _citation.journal_abbrev 'Insect Biochem.Mol.Biol.' _citation.journal_volume 42 _citation.page_first 41 _citation.page_last 50 _citation.year 2012 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 0965-1748 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22075131 _citation.pdbx_database_id_DOI 10.1016/j.ibmb.2011.10.005 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Spinelli, S.' 1 ? primary 'Lagarde, A.' 2 ? primary 'Iovinella, I.' 3 ? primary 'Legrand, P.' 4 ? primary 'Tegoni, M.' 5 ? primary 'Pelosi, P.' 6 ? primary 'Cambillau, C.' 7 ? # _cell.entry_id 3S0D _cell.length_a 32.400 _cell.length_b 37.860 _cell.length_c 86.150 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3S0D _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man OBP14 13553.611 1 ? ? 'UNP residues 18-135' ? 2 non-polymer syn '(2Z)-3,7-dimethylocta-2,6-dienenitrile' 149.233 1 ? ? ? ? 3 water nat water 18.015 171 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'odorant binding protein 14' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MTIEELKTRLHTEQSVCKTETGIDQQKANDVIEGNIDVEDKKVQLYCECILKNFNILDKNNVFKPQGIKAVMELLIDENS VKQLVSDCSTISEENPHLKASKLVQCVSKYKTMKSVDFL ; _entity_poly.pdbx_seq_one_letter_code_can ;MTIEELKTRLHTEQSVCKTETGIDQQKANDVIEGNIDVEDKKVQLYCECILKNFNILDKNNVFKPQGIKAVMELLIDENS VKQLVSDCSTISEENPHLKASKLVQCVSKYKTMKSVDFL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 THR n 1 3 ILE n 1 4 GLU n 1 5 GLU n 1 6 LEU n 1 7 LYS n 1 8 THR n 1 9 ARG n 1 10 LEU n 1 11 HIS n 1 12 THR n 1 13 GLU n 1 14 GLN n 1 15 SER n 1 16 VAL n 1 17 CYS n 1 18 LYS n 1 19 THR n 1 20 GLU n 1 21 THR n 1 22 GLY n 1 23 ILE n 1 24 ASP n 1 25 GLN n 1 26 GLN n 1 27 LYS n 1 28 ALA n 1 29 ASN n 1 30 ASP n 1 31 VAL n 1 32 ILE n 1 33 GLU n 1 34 GLY n 1 35 ASN n 1 36 ILE n 1 37 ASP n 1 38 VAL n 1 39 GLU n 1 40 ASP n 1 41 LYS n 1 42 LYS n 1 43 VAL n 1 44 GLN n 1 45 LEU n 1 46 TYR n 1 47 CYS n 1 48 GLU n 1 49 CYS n 1 50 ILE n 1 51 LEU n 1 52 LYS n 1 53 ASN n 1 54 PHE n 1 55 ASN n 1 56 ILE n 1 57 LEU n 1 58 ASP n 1 59 LYS n 1 60 ASN n 1 61 ASN n 1 62 VAL n 1 63 PHE n 1 64 LYS n 1 65 PRO n 1 66 GLN n 1 67 GLY n 1 68 ILE n 1 69 LYS n 1 70 ALA n 1 71 VAL n 1 72 MET n 1 73 GLU n 1 74 LEU n 1 75 LEU n 1 76 ILE n 1 77 ASP n 1 78 GLU n 1 79 ASN n 1 80 SER n 1 81 VAL n 1 82 LYS n 1 83 GLN n 1 84 LEU n 1 85 VAL n 1 86 SER n 1 87 ASP n 1 88 CYS n 1 89 SER n 1 90 THR n 1 91 ILE n 1 92 SER n 1 93 GLU n 1 94 GLU n 1 95 ASN n 1 96 PRO n 1 97 HIS n 1 98 LEU n 1 99 LYS n 1 100 ALA n 1 101 SER n 1 102 LYS n 1 103 LEU n 1 104 VAL n 1 105 GLN n 1 106 CYS n 1 107 VAL n 1 108 SER n 1 109 LYS n 1 110 TYR n 1 111 LYS n 1 112 THR n 1 113 MET n 1 114 LYS n 1 115 SER n 1 116 VAL n 1 117 ASP n 1 118 PHE n 1 119 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name honeybee _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene NP_001035313 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Apis mellifera' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 7460 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type 'pET-5 b(+)' _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q1W640_APIME _struct_ref.pdbx_db_accession Q1W640 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TIEELKTRLHTEQSVCKTETGIDQQKANDVIEGNIDVEDKKVQLYCECILKNFNILDKNNVFKPQGIKAVMELLIDENSV KQLVSDCSTISEENPHLKASKLVQCVSKYKTMKSVDFL ; _struct_ref.pdbx_align_begin 18 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3S0D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 119 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q1W640 _struct_ref_seq.db_align_beg 18 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 135 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 119 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3S0D _struct_ref_seq_dif.mon_id MET _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q1W640 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'initiating methionine' _struct_ref_seq_dif.pdbx_auth_seq_num 1 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CTV non-polymer . '(2Z)-3,7-dimethylocta-2,6-dienenitrile' citralva 'C10 H15 N' 149.233 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3S0D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.95 _exptl_crystal.density_percent_sol 36.90 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 9.8 _exptl_crystal_grow.pdbx_details '1.8-1.9 M tri-sodium citrate, 25 mM CHES, pH 9.8, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2011-02-08 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator mirrors _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8265 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SOLEIL BEAMLINE PROXIMA 1' _diffrn_source.pdbx_synchrotron_site SOLEIL _diffrn_source.pdbx_synchrotron_beamline 'PROXIMA 1' _diffrn_source.pdbx_wavelength 0.8265 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3S0D _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 45.1 _reflns.d_resolution_high 1.24 _reflns.number_obs 30933 _reflns.number_all 30933 _reflns.percent_possible_obs 98.4 _reflns.pdbx_Rmerge_I_obs 0.082 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 12.7 _reflns.B_iso_Wilson_estimate 10.5 _reflns.pdbx_redundancy 5.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.24 _reflns_shell.d_res_low 1.27 _reflns_shell.percent_possible_all 99.6 _reflns_shell.Rmerge_I_obs 0.6 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.3 _reflns_shell.pdbx_redundancy 5.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2517 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3S0D _refine.ls_number_reflns_obs 29803 _refine.ls_number_reflns_all 29803 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 43.08 _refine.ls_d_res_high 1.24 _refine.ls_percent_reflns_obs 100.00 _refine.ls_R_factor_obs 0.15942 _refine.ls_R_factor_all 0.15942 _refine.ls_R_factor_R_work 0.15869 _refine.ls_R_factor_R_free 0.18346 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 3.0 _refine.ls_number_reflns_R_free 922 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.968 _refine.correlation_coeff_Fo_to_Fc_free 0.956 _refine.B_iso_mean 7.281 _refine.aniso_B[1][1] 0.07 _refine.aniso_B[2][2] -0.26 _refine.aniso_B[3][3] 0.19 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] -0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : RESIDUAL ONLY ; _refine.pdbx_starting_model 'PDB ENTRY 3S0A' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.046 _refine.overall_SU_ML 0.027 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.354 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R 0.050 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3S0D _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free 0.046 _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 943 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 11 _refine_hist.number_atoms_solvent 171 _refine_hist.number_atoms_total 1125 _refine_hist.d_res_high 1.24 _refine_hist.d_res_low 43.08 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.012 0.022 ? 1043 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.001 0.020 ? 700 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.527 1.996 ? 1422 ? 'X-RAY DIFFRACTION' r_angle_other_deg 0.891 3.000 ? 1773 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 5.219 5.000 ? 142 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 39.366 27.955 ? 44 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 11.180 15.000 ? 227 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 11.358 15.000 ? 1 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.084 0.200 ? 173 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.005 0.020 ? 1128 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.001 0.020 ? 161 ? 'X-RAY DIFFRACTION' r_mcbond_it 1.011 1.500 ? 639 ? 'X-RAY DIFFRACTION' r_mcbond_other 0.319 1.500 ? 253 ? 'X-RAY DIFFRACTION' r_mcangle_it 1.680 2.000 ? 1063 ? 'X-RAY DIFFRACTION' r_scbond_it 2.714 3.000 ? 404 ? 'X-RAY DIFFRACTION' r_scangle_it 4.221 4.500 ? 346 ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 0.995 3.000 ? 1743 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.240 _refine_ls_shell.d_res_low 1.272 _refine_ls_shell.number_reflns_R_work 2160 _refine_ls_shell.R_factor_R_work 0.354 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.472 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 67 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 2160 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3S0D _struct.title 'Apis mellifera OBP 14 in complex with the citrus odorant citralva (3,7-dimethylocta-2,6-dienenitrile)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3S0D _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text 'all helical protein, unknown odorant molecules, antennae, TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 2 ? GLY A 22 ? THR A 2 GLY A 22 1 ? 21 HELX_P HELX_P2 2 ASP A 24 ? GLU A 33 ? ASP A 24 GLU A 33 1 ? 10 HELX_P HELX_P3 3 ASP A 40 ? PHE A 54 ? ASP A 40 PHE A 54 1 ? 15 HELX_P HELX_P4 4 LYS A 64 ? GLU A 73 ? LYS A 64 GLU A 73 1 ? 10 HELX_P HELX_P5 5 ASP A 77 ? SER A 89 ? ASP A 77 SER A 89 1 ? 13 HELX_P HELX_P6 6 ASN A 95 ? LYS A 109 ? ASN A 95 LYS A 109 1 ? 15 HELX_P HELX_P7 7 THR A 112 ? ASP A 117 ? THR A 112 ASP A 117 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 17 SG ? ? ? 1_555 A CYS 49 SG ? ? A CYS 17 A CYS 49 1_555 ? ? ? ? ? ? ? 2.048 ? ? disulf2 disulf ? ? A CYS 88 SG ? ? ? 1_555 A CYS 106 SG ? ? A CYS 88 A CYS 106 1_555 ? ? ? ? ? ? ? 1.976 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id CTV _struct_site.pdbx_auth_seq_id 120 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 8 _struct_site.details 'BINDING SITE FOR RESIDUE CTV A 120' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 PHE A 54 ? PHE A 54 . ? 1_555 ? 2 AC1 8 ILE A 56 ? ILE A 56 . ? 1_555 ? 3 AC1 8 LEU A 75 ? LEU A 75 . ? 1_555 ? 4 AC1 8 VAL A 104 ? VAL A 104 . ? 1_555 ? 5 AC1 8 VAL A 107 ? VAL A 107 . ? 1_555 ? 6 AC1 8 SER A 108 ? SER A 108 . ? 1_555 ? 7 AC1 8 LYS A 111 ? LYS A 111 . ? 1_555 ? 8 AC1 8 MET A 113 ? MET A 113 . ? 1_555 ? # _database_PDB_matrix.entry_id 3S0D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3S0D _atom_sites.fract_transf_matrix[1][1] 0.030864 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026413 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011608 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 THR 2 2 2 THR THR A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 ARG 9 9 9 ARG ARG A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 HIS 11 11 11 HIS HIS A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 CYS 17 17 17 CYS CYS A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 THR 19 19 19 THR THR A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 THR 21 21 21 THR THR A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 ASP 24 24 24 ASP ASP A . n A 1 25 GLN 25 25 25 GLN GLN A . n A 1 26 GLN 26 26 26 GLN GLN A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 ASN 29 29 29 ASN ASN A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 ASN 35 35 35 ASN ASN A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 GLN 44 44 44 GLN GLN A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 TYR 46 46 46 TYR TYR A . n A 1 47 CYS 47 47 47 CYS CYS A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 CYS 49 49 49 CYS CYS A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 ASN 53 53 53 ASN ASN A . n A 1 54 PHE 54 54 54 PHE PHE A . n A 1 55 ASN 55 55 55 ASN ASN A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 LYS 59 59 59 LYS LYS A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 PRO 65 65 65 PRO PRO A . n A 1 66 GLN 66 66 66 GLN GLN A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 ILE 68 68 68 ILE ILE A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 MET 72 72 72 MET MET A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 ASP 77 77 77 ASP ASP A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 ASN 79 79 79 ASN ASN A . n A 1 80 SER 80 80 80 SER SER A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 LYS 82 82 82 LYS LYS A . n A 1 83 GLN 83 83 83 GLN GLN A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 VAL 85 85 85 VAL VAL A . n A 1 86 SER 86 86 86 SER SER A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 CYS 88 88 88 CYS CYS A . n A 1 89 SER 89 89 89 SER SER A . n A 1 90 THR 90 90 90 THR THR A . n A 1 91 ILE 91 91 91 ILE ILE A . n A 1 92 SER 92 92 92 SER SER A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 ASN 95 95 95 ASN ASN A . n A 1 96 PRO 96 96 96 PRO PRO A . n A 1 97 HIS 97 97 97 HIS HIS A . n A 1 98 LEU 98 98 98 LEU LEU A . n A 1 99 LYS 99 99 99 LYS LYS A . n A 1 100 ALA 100 100 100 ALA ALA A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 VAL 104 104 104 VAL VAL A . n A 1 105 GLN 105 105 105 GLN GLN A . n A 1 106 CYS 106 106 106 CYS CYS A . n A 1 107 VAL 107 107 107 VAL VAL A . n A 1 108 SER 108 108 108 SER SER A . n A 1 109 LYS 109 109 109 LYS LYS A . n A 1 110 TYR 110 110 110 TYR TYR A . n A 1 111 LYS 111 111 111 LYS LYS A . n A 1 112 THR 112 112 112 THR THR A . n A 1 113 MET 113 113 113 MET MET A . n A 1 114 LYS 114 114 114 LYS LYS A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 VAL 116 116 116 VAL VAL A . n A 1 117 ASP 117 117 117 ASP ASP A . n A 1 118 PHE 118 118 118 PHE PHE A . n A 1 119 LEU 119 119 119 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CTV 1 120 1 CTV CTV A . C 3 HOH 1 121 121 HOH HOH A . C 3 HOH 2 122 122 HOH HOH A . C 3 HOH 3 123 123 HOH HOH A . C 3 HOH 4 124 124 HOH HOH A . C 3 HOH 5 125 125 HOH HOH A . C 3 HOH 6 126 126 HOH HOH A . C 3 HOH 7 127 127 HOH HOH A . C 3 HOH 8 128 128 HOH HOH A . C 3 HOH 9 130 130 HOH HOH A . C 3 HOH 10 131 131 HOH HOH A . C 3 HOH 11 132 132 HOH HOH A . C 3 HOH 12 133 133 HOH HOH A . C 3 HOH 13 134 134 HOH HOH A . C 3 HOH 14 135 135 HOH HOH A . C 3 HOH 15 136 136 HOH HOH A . C 3 HOH 16 137 137 HOH HOH A . C 3 HOH 17 138 138 HOH HOH A . C 3 HOH 18 139 139 HOH HOH A . C 3 HOH 19 140 140 HOH HOH A . C 3 HOH 20 141 141 HOH HOH A . C 3 HOH 21 142 142 HOH HOH A . C 3 HOH 22 143 143 HOH HOH A . C 3 HOH 23 144 144 HOH HOH A . C 3 HOH 24 145 145 HOH HOH A . C 3 HOH 25 146 146 HOH HOH A . C 3 HOH 26 147 147 HOH HOH A . C 3 HOH 27 148 148 HOH HOH A . C 3 HOH 28 149 149 HOH HOH A . C 3 HOH 29 150 150 HOH HOH A . C 3 HOH 30 151 151 HOH HOH A . C 3 HOH 31 152 152 HOH HOH A . C 3 HOH 32 153 153 HOH HOH A . C 3 HOH 33 154 154 HOH HOH A . C 3 HOH 34 155 155 HOH HOH A . C 3 HOH 35 156 156 HOH HOH A . C 3 HOH 36 157 157 HOH HOH A . C 3 HOH 37 158 158 HOH HOH A . C 3 HOH 38 159 159 HOH HOH A . C 3 HOH 39 160 160 HOH HOH A . C 3 HOH 40 161 161 HOH HOH A . C 3 HOH 41 162 162 HOH HOH A . C 3 HOH 42 163 163 HOH HOH A . C 3 HOH 43 164 164 HOH HOH A . C 3 HOH 44 165 165 HOH HOH A . C 3 HOH 45 166 166 HOH HOH A . C 3 HOH 46 167 167 HOH HOH A . C 3 HOH 47 168 168 HOH HOH A . C 3 HOH 48 169 169 HOH HOH A . C 3 HOH 49 170 170 HOH HOH A . C 3 HOH 50 171 171 HOH HOH A . C 3 HOH 51 172 172 HOH HOH A . C 3 HOH 52 173 1 HOH HOH A . C 3 HOH 53 174 2 HOH HOH A . C 3 HOH 54 175 3 HOH HOH A . C 3 HOH 55 176 4 HOH HOH A . C 3 HOH 56 177 5 HOH HOH A . C 3 HOH 57 178 6 HOH HOH A . C 3 HOH 58 179 7 HOH HOH A . C 3 HOH 59 180 8 HOH HOH A . C 3 HOH 60 181 9 HOH HOH A . C 3 HOH 61 182 10 HOH HOH A . C 3 HOH 62 183 11 HOH HOH A . C 3 HOH 63 184 12 HOH HOH A . C 3 HOH 64 185 13 HOH HOH A . C 3 HOH 65 186 14 HOH HOH A . C 3 HOH 66 187 15 HOH HOH A . C 3 HOH 67 188 16 HOH HOH A . C 3 HOH 68 189 17 HOH HOH A . C 3 HOH 69 190 18 HOH HOH A . C 3 HOH 70 191 19 HOH HOH A . C 3 HOH 71 192 20 HOH HOH A . C 3 HOH 72 193 21 HOH HOH A . C 3 HOH 73 194 22 HOH HOH A . C 3 HOH 74 195 23 HOH HOH A . C 3 HOH 75 196 24 HOH HOH A . C 3 HOH 76 197 25 HOH HOH A . C 3 HOH 77 198 26 HOH HOH A . C 3 HOH 78 199 27 HOH HOH A . C 3 HOH 79 200 28 HOH HOH A . C 3 HOH 80 201 29 HOH HOH A . C 3 HOH 81 202 30 HOH HOH A . C 3 HOH 82 203 31 HOH HOH A . C 3 HOH 83 204 32 HOH HOH A . C 3 HOH 84 205 33 HOH HOH A . C 3 HOH 85 206 34 HOH HOH A . C 3 HOH 86 207 35 HOH HOH A . C 3 HOH 87 208 36 HOH HOH A . C 3 HOH 88 209 37 HOH HOH A . C 3 HOH 89 210 38 HOH HOH A . C 3 HOH 90 211 39 HOH HOH A . C 3 HOH 91 212 40 HOH HOH A . C 3 HOH 92 213 41 HOH HOH A . C 3 HOH 93 214 42 HOH HOH A . C 3 HOH 94 215 43 HOH HOH A . C 3 HOH 95 216 44 HOH HOH A . C 3 HOH 96 217 45 HOH HOH A . C 3 HOH 97 218 46 HOH HOH A . C 3 HOH 98 219 47 HOH HOH A . C 3 HOH 99 220 48 HOH HOH A . C 3 HOH 100 221 49 HOH HOH A . C 3 HOH 101 222 50 HOH HOH A . C 3 HOH 102 223 51 HOH HOH A . C 3 HOH 103 224 52 HOH HOH A . C 3 HOH 104 225 53 HOH HOH A . C 3 HOH 105 226 54 HOH HOH A . C 3 HOH 106 227 55 HOH HOH A . C 3 HOH 107 228 56 HOH HOH A . C 3 HOH 108 229 57 HOH HOH A . C 3 HOH 109 230 58 HOH HOH A . C 3 HOH 110 231 59 HOH HOH A . C 3 HOH 111 232 60 HOH HOH A . C 3 HOH 112 233 61 HOH HOH A . C 3 HOH 113 234 62 HOH HOH A . C 3 HOH 114 235 63 HOH HOH A . C 3 HOH 115 236 64 HOH HOH A . C 3 HOH 116 237 65 HOH HOH A . C 3 HOH 117 238 66 HOH HOH A . C 3 HOH 118 239 67 HOH HOH A . C 3 HOH 119 240 68 HOH HOH A . C 3 HOH 120 241 69 HOH HOH A . C 3 HOH 121 242 70 HOH HOH A . C 3 HOH 122 243 71 HOH HOH A . C 3 HOH 123 244 72 HOH HOH A . C 3 HOH 124 245 73 HOH HOH A . C 3 HOH 125 246 74 HOH HOH A . C 3 HOH 126 247 75 HOH HOH A . C 3 HOH 127 248 76 HOH HOH A . C 3 HOH 128 249 77 HOH HOH A . C 3 HOH 129 250 78 HOH HOH A . C 3 HOH 130 251 79 HOH HOH A . C 3 HOH 131 252 80 HOH HOH A . C 3 HOH 132 253 81 HOH HOH A . C 3 HOH 133 254 82 HOH HOH A . C 3 HOH 134 255 83 HOH HOH A . C 3 HOH 135 256 84 HOH HOH A . C 3 HOH 136 257 85 HOH HOH A . C 3 HOH 137 258 86 HOH HOH A . C 3 HOH 138 259 87 HOH HOH A . C 3 HOH 139 260 88 HOH HOH A . C 3 HOH 140 261 89 HOH HOH A . C 3 HOH 141 262 90 HOH HOH A . C 3 HOH 142 263 91 HOH HOH A . C 3 HOH 143 264 92 HOH HOH A . C 3 HOH 144 265 93 HOH HOH A . C 3 HOH 145 266 94 HOH HOH A . C 3 HOH 146 267 95 HOH HOH A . C 3 HOH 147 268 96 HOH HOH A . C 3 HOH 148 269 97 HOH HOH A . C 3 HOH 149 270 98 HOH HOH A . C 3 HOH 150 271 99 HOH HOH A . C 3 HOH 151 272 100 HOH HOH A . C 3 HOH 152 273 101 HOH HOH A . C 3 HOH 153 274 102 HOH HOH A . C 3 HOH 154 275 103 HOH HOH A . C 3 HOH 155 276 104 HOH HOH A . C 3 HOH 156 277 105 HOH HOH A . C 3 HOH 157 278 106 HOH HOH A . C 3 HOH 158 279 107 HOH HOH A . C 3 HOH 159 280 108 HOH HOH A . C 3 HOH 160 281 109 HOH HOH A . C 3 HOH 161 282 110 HOH HOH A . C 3 HOH 162 283 111 HOH HOH A . C 3 HOH 163 284 112 HOH HOH A . C 3 HOH 164 285 113 HOH HOH A . C 3 HOH 165 286 114 HOH HOH A . C 3 HOH 166 287 115 HOH HOH A . C 3 HOH 167 288 116 HOH HOH A . C 3 HOH 168 289 117 HOH HOH A . C 3 HOH 169 290 118 HOH HOH A . C 3 HOH 170 291 119 HOH HOH A . C 3 HOH 171 292 120 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-11-30 2 'Structure model' 1 1 2012-01-11 3 'Structure model' 1 2 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 16.0530 3.4921 29.5034 0.0721 0.0175 0.0160 -0.0019 0.0076 0.0025 -0.3633 2.2329 3.2013 1.2075 0.8083 1.6269 0.0844 0.0104 0.0702 0.3112 -0.0874 -0.0029 0.2948 -0.0245 0.0030 'X-RAY DIFFRACTION' 2 ? refined 18.2125 16.4627 24.5735 0.0312 0.0315 0.0312 0.0027 0.0025 0.0043 0.1057 3.0743 0.2906 -0.4511 -0.1232 -0.9317 0.0069 0.0114 0.0488 0.0007 -0.0227 -0.0824 0.0331 0.0524 0.0158 'X-RAY DIFFRACTION' 3 ? refined 19.0174 24.9886 31.5804 0.0136 0.0282 0.0335 0.0017 0.0010 -0.0036 0.4715 1.6243 2.2521 0.4507 0.0314 -0.3488 0.0186 -0.0118 0.0145 0.0565 -0.0565 -0.1274 -0.0549 0.1074 0.0379 'X-RAY DIFFRACTION' 4 ? refined 11.5390 24.1056 35.9701 0.0395 0.0300 0.0473 0.0076 -0.0054 -0.0143 0.7008 0.5306 1.2756 0.0989 0.8199 -0.9202 -0.0543 -0.1412 0.1521 0.1187 0.0177 0.0035 -0.0945 -0.0386 0.0366 'X-RAY DIFFRACTION' 5 ? refined 10.6383 24.2408 26.0629 0.0298 0.0259 0.0325 -0.0025 0.0000 0.0049 1.2331 0.3969 0.4850 0.0572 0.2829 0.3901 -0.0432 0.0459 0.0813 -0.0220 0.0497 0.0308 -0.0165 0.0145 -0.0065 'X-RAY DIFFRACTION' 6 ? refined 4.4656 14.8254 21.2097 0.0327 0.0150 0.0589 -0.0106 -0.0127 -0.0042 3.5481 -0.2779 1.3161 -0.3576 1.1218 -0.5749 0.0309 0.0543 -0.1940 -0.0767 0.0184 0.0476 0.1078 -0.0228 -0.0493 'X-RAY DIFFRACTION' 7 ? refined -1.1825 10.5775 27.1311 0.0475 0.0629 0.0089 -0.0455 -0.0176 0.0113 3.6253 1.8068 3.5347 1.7184 2.5918 -1.0351 0.2743 -0.3228 0.1245 -0.0935 0.0356 0.2313 0.4498 -0.4586 -0.3099 'X-RAY DIFFRACTION' 8 ? refined 3.7091 3.1028 37.2966 0.0678 0.0924 0.0089 -0.0467 0.0171 -0.0159 6.2440 0.6167 1.8048 1.1699 -2.7725 0.0158 -0.2305 -0.0783 -0.1366 -0.0896 0.1674 -0.1014 0.2184 -0.0681 0.0631 'X-RAY DIFFRACTION' 9 ? refined -3.5762 10.9746 37.2227 0.0149 0.0496 0.0456 -0.0105 0.0029 0.0098 -0.7562 5.1013 3.1290 -0.1904 0.5775 -2.2556 0.0347 -0.0643 0.0883 -0.1115 -0.0082 0.1641 0.2610 -0.2342 -0.0264 'X-RAY DIFFRACTION' 10 ? refined -1.1251 25.4889 28.8340 0.0164 0.0341 0.0552 0.0043 -0.0074 0.0192 1.8517 1.2930 1.4517 0.2519 -0.7564 -0.2007 0.0543 -0.0096 0.0479 -0.1060 0.0464 0.1640 0.0088 -0.0842 -0.1006 'X-RAY DIFFRACTION' 11 ? refined 4.4209 19.1526 36.6715 0.0147 0.0351 0.0438 -0.0023 0.0049 -0.0009 -0.7446 4.9742 2.6963 -0.7245 0.0675 -0.9753 0.0240 -0.0036 0.0020 0.1132 -0.0281 0.2495 0.0251 -0.0305 0.0041 'X-RAY DIFFRACTION' 12 ? refined 14.3597 9.8965 38.8780 0.0522 0.0267 0.0187 0.0035 0.0009 0.0004 0.9686 0.0654 0.6614 0.1297 0.8318 -0.2051 0.0504 -0.0042 -0.0432 -0.0167 -0.0131 -0.0089 0.0788 0.0224 -0.0373 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 1 ? ? A 10 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 11 ? ? A 20 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 21 ? ? A 30 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 31 ? ? A 40 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 41 ? ? A 50 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 A 51 ? ? A 60 ? ? ? ? 'X-RAY DIFFRACTION' 7 7 A 61 ? ? A 70 ? ? ? ? 'X-RAY DIFFRACTION' 8 8 A 71 ? ? A 80 ? ? ? ? 'X-RAY DIFFRACTION' 9 9 A 81 ? ? A 90 ? ? ? ? 'X-RAY DIFFRACTION' 10 10 A 91 ? ? A 100 ? ? ? ? 'X-RAY DIFFRACTION' 11 11 A 101 ? ? A 109 ? ? ? ? 'X-RAY DIFFRACTION' 12 12 A 110 ? ? A 119 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.5.0109 ? 3 XDS 'data reduction' . ? 4 XSCALE 'data scaling' . ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 208 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 246 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.82 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CTV C1 C N N 74 CTV N1 N N N 75 CTV C2 C N N 76 CTV C3 C N N 77 CTV C4 C N N 78 CTV C5 C N N 79 CTV C6 C N N 80 CTV C7 C N N 81 CTV C8 C N N 82 CTV C9 C N N 83 CTV C10 C N N 84 CTV H1 H N N 85 CTV H1A H N N 86 CTV H2 H N N 87 CTV H2A H N N 88 CTV H2B H N N 89 CTV H4 H N N 90 CTV H5 H N N 91 CTV H5A H N N 92 CTV H6 H N N 93 CTV H6A H N N 94 CTV H8 H N N 95 CTV H9 H N N 96 CTV H9A H N N 97 CTV H9B H N N 98 CTV H15 H N N 99 CYS N N N N 100 CYS CA C N R 101 CYS C C N N 102 CYS O O N N 103 CYS CB C N N 104 CYS SG S N N 105 CYS OXT O N N 106 CYS H H N N 107 CYS H2 H N N 108 CYS HA H N N 109 CYS HB2 H N N 110 CYS HB3 H N N 111 CYS HG H N N 112 CYS HXT H N N 113 GLN N N N N 114 GLN CA C N S 115 GLN C C N N 116 GLN O O N N 117 GLN CB C N N 118 GLN CG C N N 119 GLN CD C N N 120 GLN OE1 O N N 121 GLN NE2 N N N 122 GLN OXT O N N 123 GLN H H N N 124 GLN H2 H N N 125 GLN HA H N N 126 GLN HB2 H N N 127 GLN HB3 H N N 128 GLN HG2 H N N 129 GLN HG3 H N N 130 GLN HE21 H N N 131 GLN HE22 H N N 132 GLN HXT H N N 133 GLU N N N N 134 GLU CA C N S 135 GLU C C N N 136 GLU O O N N 137 GLU CB C N N 138 GLU CG C N N 139 GLU CD C N N 140 GLU OE1 O N N 141 GLU OE2 O N N 142 GLU OXT O N N 143 GLU H H N N 144 GLU H2 H N N 145 GLU HA H N N 146 GLU HB2 H N N 147 GLU HB3 H N N 148 GLU HG2 H N N 149 GLU HG3 H N N 150 GLU HE2 H N N 151 GLU HXT H N N 152 GLY N N N N 153 GLY CA C N N 154 GLY C C N N 155 GLY O O N N 156 GLY OXT O N N 157 GLY H H N N 158 GLY H2 H N N 159 GLY HA2 H N N 160 GLY HA3 H N N 161 GLY HXT H N N 162 HIS N N N N 163 HIS CA C N S 164 HIS C C N N 165 HIS O O N N 166 HIS CB C N N 167 HIS CG C Y N 168 HIS ND1 N Y N 169 HIS CD2 C Y N 170 HIS CE1 C Y N 171 HIS NE2 N Y N 172 HIS OXT O N N 173 HIS H H N N 174 HIS H2 H N N 175 HIS HA H N N 176 HIS HB2 H N N 177 HIS HB3 H N N 178 HIS HD1 H N N 179 HIS HD2 H N N 180 HIS HE1 H N N 181 HIS HE2 H N N 182 HIS HXT H N N 183 HOH O O N N 184 HOH H1 H N N 185 HOH H2 H N N 186 ILE N N N N 187 ILE CA C N S 188 ILE C C N N 189 ILE O O N N 190 ILE CB C N S 191 ILE CG1 C N N 192 ILE CG2 C N N 193 ILE CD1 C N N 194 ILE OXT O N N 195 ILE H H N N 196 ILE H2 H N N 197 ILE HA H N N 198 ILE HB H N N 199 ILE HG12 H N N 200 ILE HG13 H N N 201 ILE HG21 H N N 202 ILE HG22 H N N 203 ILE HG23 H N N 204 ILE HD11 H N N 205 ILE HD12 H N N 206 ILE HD13 H N N 207 ILE HXT H N N 208 LEU N N N N 209 LEU CA C N S 210 LEU C C N N 211 LEU O O N N 212 LEU CB C N N 213 LEU CG C N N 214 LEU CD1 C N N 215 LEU CD2 C N N 216 LEU OXT O N N 217 LEU H H N N 218 LEU H2 H N N 219 LEU HA H N N 220 LEU HB2 H N N 221 LEU HB3 H N N 222 LEU HG H N N 223 LEU HD11 H N N 224 LEU HD12 H N N 225 LEU HD13 H N N 226 LEU HD21 H N N 227 LEU HD22 H N N 228 LEU HD23 H N N 229 LEU HXT H N N 230 LYS N N N N 231 LYS CA C N S 232 LYS C C N N 233 LYS O O N N 234 LYS CB C N N 235 LYS CG C N N 236 LYS CD C N N 237 LYS CE C N N 238 LYS NZ N N N 239 LYS OXT O N N 240 LYS H H N N 241 LYS H2 H N N 242 LYS HA H N N 243 LYS HB2 H N N 244 LYS HB3 H N N 245 LYS HG2 H N N 246 LYS HG3 H N N 247 LYS HD2 H N N 248 LYS HD3 H N N 249 LYS HE2 H N N 250 LYS HE3 H N N 251 LYS HZ1 H N N 252 LYS HZ2 H N N 253 LYS HZ3 H N N 254 LYS HXT H N N 255 MET N N N N 256 MET CA C N S 257 MET C C N N 258 MET O O N N 259 MET CB C N N 260 MET CG C N N 261 MET SD S N N 262 MET CE C N N 263 MET OXT O N N 264 MET H H N N 265 MET H2 H N N 266 MET HA H N N 267 MET HB2 H N N 268 MET HB3 H N N 269 MET HG2 H N N 270 MET HG3 H N N 271 MET HE1 H N N 272 MET HE2 H N N 273 MET HE3 H N N 274 MET HXT H N N 275 PHE N N N N 276 PHE CA C N S 277 PHE C C N N 278 PHE O O N N 279 PHE CB C N N 280 PHE CG C Y N 281 PHE CD1 C Y N 282 PHE CD2 C Y N 283 PHE CE1 C Y N 284 PHE CE2 C Y N 285 PHE CZ C Y N 286 PHE OXT O N N 287 PHE H H N N 288 PHE H2 H N N 289 PHE HA H N N 290 PHE HB2 H N N 291 PHE HB3 H N N 292 PHE HD1 H N N 293 PHE HD2 H N N 294 PHE HE1 H N N 295 PHE HE2 H N N 296 PHE HZ H N N 297 PHE HXT H N N 298 PRO N N N N 299 PRO CA C N S 300 PRO C C N N 301 PRO O O N N 302 PRO CB C N N 303 PRO CG C N N 304 PRO CD C N N 305 PRO OXT O N N 306 PRO H H N N 307 PRO HA H N N 308 PRO HB2 H N N 309 PRO HB3 H N N 310 PRO HG2 H N N 311 PRO HG3 H N N 312 PRO HD2 H N N 313 PRO HD3 H N N 314 PRO HXT H N N 315 SER N N N N 316 SER CA C N S 317 SER C C N N 318 SER O O N N 319 SER CB C N N 320 SER OG O N N 321 SER OXT O N N 322 SER H H N N 323 SER H2 H N N 324 SER HA H N N 325 SER HB2 H N N 326 SER HB3 H N N 327 SER HG H N N 328 SER HXT H N N 329 THR N N N N 330 THR CA C N S 331 THR C C N N 332 THR O O N N 333 THR CB C N R 334 THR OG1 O N N 335 THR CG2 C N N 336 THR OXT O N N 337 THR H H N N 338 THR H2 H N N 339 THR HA H N N 340 THR HB H N N 341 THR HG1 H N N 342 THR HG21 H N N 343 THR HG22 H N N 344 THR HG23 H N N 345 THR HXT H N N 346 TYR N N N N 347 TYR CA C N S 348 TYR C C N N 349 TYR O O N N 350 TYR CB C N N 351 TYR CG C Y N 352 TYR CD1 C Y N 353 TYR CD2 C Y N 354 TYR CE1 C Y N 355 TYR CE2 C Y N 356 TYR CZ C Y N 357 TYR OH O N N 358 TYR OXT O N N 359 TYR H H N N 360 TYR H2 H N N 361 TYR HA H N N 362 TYR HB2 H N N 363 TYR HB3 H N N 364 TYR HD1 H N N 365 TYR HD2 H N N 366 TYR HE1 H N N 367 TYR HE2 H N N 368 TYR HH H N N 369 TYR HXT H N N 370 VAL N N N N 371 VAL CA C N S 372 VAL C C N N 373 VAL O O N N 374 VAL CB C N N 375 VAL CG1 C N N 376 VAL CG2 C N N 377 VAL OXT O N N 378 VAL H H N N 379 VAL H2 H N N 380 VAL HA H N N 381 VAL HB H N N 382 VAL HG11 H N N 383 VAL HG12 H N N 384 VAL HG13 H N N 385 VAL HG21 H N N 386 VAL HG22 H N N 387 VAL HG23 H N N 388 VAL HXT H N N 389 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CTV C1 C3 sing N N 70 CTV C1 H1 sing N N 71 CTV C1 H1A sing N N 72 CTV N1 C10 trip N N 73 CTV C2 C3 sing N N 74 CTV C2 H2 sing N N 75 CTV C2 H2A sing N N 76 CTV C2 H2B sing N N 77 CTV C3 C4 doub N N 78 CTV C4 C5 sing N N 79 CTV C4 H4 sing N N 80 CTV C5 C6 sing N N 81 CTV C5 H5 sing N N 82 CTV C5 H5A sing N N 83 CTV C6 C7 sing N N 84 CTV C6 H6 sing N N 85 CTV C6 H6A sing N N 86 CTV C7 C8 doub N N 87 CTV C7 C9 sing N Z 88 CTV C8 C10 sing N N 89 CTV C8 H8 sing N N 90 CTV C9 H9 sing N N 91 CTV C9 H9A sing N N 92 CTV C9 H9B sing N N 93 CTV C1 H15 sing N N 94 CYS N CA sing N N 95 CYS N H sing N N 96 CYS N H2 sing N N 97 CYS CA C sing N N 98 CYS CA CB sing N N 99 CYS CA HA sing N N 100 CYS C O doub N N 101 CYS C OXT sing N N 102 CYS CB SG sing N N 103 CYS CB HB2 sing N N 104 CYS CB HB3 sing N N 105 CYS SG HG sing N N 106 CYS OXT HXT sing N N 107 GLN N CA sing N N 108 GLN N H sing N N 109 GLN N H2 sing N N 110 GLN CA C sing N N 111 GLN CA CB sing N N 112 GLN CA HA sing N N 113 GLN C O doub N N 114 GLN C OXT sing N N 115 GLN CB CG sing N N 116 GLN CB HB2 sing N N 117 GLN CB HB3 sing N N 118 GLN CG CD sing N N 119 GLN CG HG2 sing N N 120 GLN CG HG3 sing N N 121 GLN CD OE1 doub N N 122 GLN CD NE2 sing N N 123 GLN NE2 HE21 sing N N 124 GLN NE2 HE22 sing N N 125 GLN OXT HXT sing N N 126 GLU N CA sing N N 127 GLU N H sing N N 128 GLU N H2 sing N N 129 GLU CA C sing N N 130 GLU CA CB sing N N 131 GLU CA HA sing N N 132 GLU C O doub N N 133 GLU C OXT sing N N 134 GLU CB CG sing N N 135 GLU CB HB2 sing N N 136 GLU CB HB3 sing N N 137 GLU CG CD sing N N 138 GLU CG HG2 sing N N 139 GLU CG HG3 sing N N 140 GLU CD OE1 doub N N 141 GLU CD OE2 sing N N 142 GLU OE2 HE2 sing N N 143 GLU OXT HXT sing N N 144 GLY N CA sing N N 145 GLY N H sing N N 146 GLY N H2 sing N N 147 GLY CA C sing N N 148 GLY CA HA2 sing N N 149 GLY CA HA3 sing N N 150 GLY C O doub N N 151 GLY C OXT sing N N 152 GLY OXT HXT sing N N 153 HIS N CA sing N N 154 HIS N H sing N N 155 HIS N H2 sing N N 156 HIS CA C sing N N 157 HIS CA CB sing N N 158 HIS CA HA sing N N 159 HIS C O doub N N 160 HIS C OXT sing N N 161 HIS CB CG sing N N 162 HIS CB HB2 sing N N 163 HIS CB HB3 sing N N 164 HIS CG ND1 sing Y N 165 HIS CG CD2 doub Y N 166 HIS ND1 CE1 doub Y N 167 HIS ND1 HD1 sing N N 168 HIS CD2 NE2 sing Y N 169 HIS CD2 HD2 sing N N 170 HIS CE1 NE2 sing Y N 171 HIS CE1 HE1 sing N N 172 HIS NE2 HE2 sing N N 173 HIS OXT HXT sing N N 174 HOH O H1 sing N N 175 HOH O H2 sing N N 176 ILE N CA sing N N 177 ILE N H sing N N 178 ILE N H2 sing N N 179 ILE CA C sing N N 180 ILE CA CB sing N N 181 ILE CA HA sing N N 182 ILE C O doub N N 183 ILE C OXT sing N N 184 ILE CB CG1 sing N N 185 ILE CB CG2 sing N N 186 ILE CB HB sing N N 187 ILE CG1 CD1 sing N N 188 ILE CG1 HG12 sing N N 189 ILE CG1 HG13 sing N N 190 ILE CG2 HG21 sing N N 191 ILE CG2 HG22 sing N N 192 ILE CG2 HG23 sing N N 193 ILE CD1 HD11 sing N N 194 ILE CD1 HD12 sing N N 195 ILE CD1 HD13 sing N N 196 ILE OXT HXT sing N N 197 LEU N CA sing N N 198 LEU N H sing N N 199 LEU N H2 sing N N 200 LEU CA C sing N N 201 LEU CA CB sing N N 202 LEU CA HA sing N N 203 LEU C O doub N N 204 LEU C OXT sing N N 205 LEU CB CG sing N N 206 LEU CB HB2 sing N N 207 LEU CB HB3 sing N N 208 LEU CG CD1 sing N N 209 LEU CG CD2 sing N N 210 LEU CG HG sing N N 211 LEU CD1 HD11 sing N N 212 LEU CD1 HD12 sing N N 213 LEU CD1 HD13 sing N N 214 LEU CD2 HD21 sing N N 215 LEU CD2 HD22 sing N N 216 LEU CD2 HD23 sing N N 217 LEU OXT HXT sing N N 218 LYS N CA sing N N 219 LYS N H sing N N 220 LYS N H2 sing N N 221 LYS CA C sing N N 222 LYS CA CB sing N N 223 LYS CA HA sing N N 224 LYS C O doub N N 225 LYS C OXT sing N N 226 LYS CB CG sing N N 227 LYS CB HB2 sing N N 228 LYS CB HB3 sing N N 229 LYS CG CD sing N N 230 LYS CG HG2 sing N N 231 LYS CG HG3 sing N N 232 LYS CD CE sing N N 233 LYS CD HD2 sing N N 234 LYS CD HD3 sing N N 235 LYS CE NZ sing N N 236 LYS CE HE2 sing N N 237 LYS CE HE3 sing N N 238 LYS NZ HZ1 sing N N 239 LYS NZ HZ2 sing N N 240 LYS NZ HZ3 sing N N 241 LYS OXT HXT sing N N 242 MET N CA sing N N 243 MET N H sing N N 244 MET N H2 sing N N 245 MET CA C sing N N 246 MET CA CB sing N N 247 MET CA HA sing N N 248 MET C O doub N N 249 MET C OXT sing N N 250 MET CB CG sing N N 251 MET CB HB2 sing N N 252 MET CB HB3 sing N N 253 MET CG SD sing N N 254 MET CG HG2 sing N N 255 MET CG HG3 sing N N 256 MET SD CE sing N N 257 MET CE HE1 sing N N 258 MET CE HE2 sing N N 259 MET CE HE3 sing N N 260 MET OXT HXT sing N N 261 PHE N CA sing N N 262 PHE N H sing N N 263 PHE N H2 sing N N 264 PHE CA C sing N N 265 PHE CA CB sing N N 266 PHE CA HA sing N N 267 PHE C O doub N N 268 PHE C OXT sing N N 269 PHE CB CG sing N N 270 PHE CB HB2 sing N N 271 PHE CB HB3 sing N N 272 PHE CG CD1 doub Y N 273 PHE CG CD2 sing Y N 274 PHE CD1 CE1 sing Y N 275 PHE CD1 HD1 sing N N 276 PHE CD2 CE2 doub Y N 277 PHE CD2 HD2 sing N N 278 PHE CE1 CZ doub Y N 279 PHE CE1 HE1 sing N N 280 PHE CE2 CZ sing Y N 281 PHE CE2 HE2 sing N N 282 PHE CZ HZ sing N N 283 PHE OXT HXT sing N N 284 PRO N CA sing N N 285 PRO N CD sing N N 286 PRO N H sing N N 287 PRO CA C sing N N 288 PRO CA CB sing N N 289 PRO CA HA sing N N 290 PRO C O doub N N 291 PRO C OXT sing N N 292 PRO CB CG sing N N 293 PRO CB HB2 sing N N 294 PRO CB HB3 sing N N 295 PRO CG CD sing N N 296 PRO CG HG2 sing N N 297 PRO CG HG3 sing N N 298 PRO CD HD2 sing N N 299 PRO CD HD3 sing N N 300 PRO OXT HXT sing N N 301 SER N CA sing N N 302 SER N H sing N N 303 SER N H2 sing N N 304 SER CA C sing N N 305 SER CA CB sing N N 306 SER CA HA sing N N 307 SER C O doub N N 308 SER C OXT sing N N 309 SER CB OG sing N N 310 SER CB HB2 sing N N 311 SER CB HB3 sing N N 312 SER OG HG sing N N 313 SER OXT HXT sing N N 314 THR N CA sing N N 315 THR N H sing N N 316 THR N H2 sing N N 317 THR CA C sing N N 318 THR CA CB sing N N 319 THR CA HA sing N N 320 THR C O doub N N 321 THR C OXT sing N N 322 THR CB OG1 sing N N 323 THR CB CG2 sing N N 324 THR CB HB sing N N 325 THR OG1 HG1 sing N N 326 THR CG2 HG21 sing N N 327 THR CG2 HG22 sing N N 328 THR CG2 HG23 sing N N 329 THR OXT HXT sing N N 330 TYR N CA sing N N 331 TYR N H sing N N 332 TYR N H2 sing N N 333 TYR CA C sing N N 334 TYR CA CB sing N N 335 TYR CA HA sing N N 336 TYR C O doub N N 337 TYR C OXT sing N N 338 TYR CB CG sing N N 339 TYR CB HB2 sing N N 340 TYR CB HB3 sing N N 341 TYR CG CD1 doub Y N 342 TYR CG CD2 sing Y N 343 TYR CD1 CE1 sing Y N 344 TYR CD1 HD1 sing N N 345 TYR CD2 CE2 doub Y N 346 TYR CD2 HD2 sing N N 347 TYR CE1 CZ doub Y N 348 TYR CE1 HE1 sing N N 349 TYR CE2 CZ sing Y N 350 TYR CE2 HE2 sing N N 351 TYR CZ OH sing N N 352 TYR OH HH sing N N 353 TYR OXT HXT sing N N 354 VAL N CA sing N N 355 VAL N H sing N N 356 VAL N H2 sing N N 357 VAL CA C sing N N 358 VAL CA CB sing N N 359 VAL CA HA sing N N 360 VAL C O doub N N 361 VAL C OXT sing N N 362 VAL CB CG1 sing N N 363 VAL CB CG2 sing N N 364 VAL CB HB sing N N 365 VAL CG1 HG11 sing N N 366 VAL CG1 HG12 sing N N 367 VAL CG1 HG13 sing N N 368 VAL CG2 HG21 sing N N 369 VAL CG2 HG22 sing N N 370 VAL CG2 HG23 sing N N 371 VAL OXT HXT sing N N 372 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '(2Z)-3,7-dimethylocta-2,6-dienenitrile' CTV 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3S0A _pdbx_initial_refinement_model.details 'PDB ENTRY 3S0A' #