HEADER MOTOR PROTEIN 13-MAY-11 3S0H TITLE THE CRYSTAL STRUCTURE OF THE PERIPLASMIC DOMAIN OF HELICOBACTER PYLORI TITLE 2 MOTB (RESIDUES 90-256). COMPND MOL_ID: 1; COMPND 2 MOLECULE: MOTILITY PROTEIN B; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN (UNP RESIDUES 91-257); COMPND 5 SYNONYM: CHEMOTAXIS PROTEIN MOTB; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HELICOBACTER PYLORI; SOURCE 3 ORGANISM_TAXID: 210; SOURCE 4 GENE: MOTB, HP_0816; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 KEYWDS PEPTIDOGLYCAN BINDING, FLAGELLAR ROTATION, CHEMOTAXIS, BACTERIAL KEYWDS 2 FLAGELLAR MOTOR, MEMBRANE, MOTOR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.R.ROUJEINIKOVA REVDAT 2 28-FEB-24 3S0H 1 REMARK SEQADV REVDAT 1 14-MAR-12 3S0H 0 JRNL AUTH J.O'NEILL,M.XIE,M.HIJNEN,A.ROUJEINIKOVA JRNL TITL ROLE OF THE MOTB LINKER IN THE ASSEMBLY AND ACTIVATION OF JRNL TITL 2 THE BACTERIAL FLAGELLAR MOTOR. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 67 1009 2011 JRNL REFN ISSN 0907-4449 JRNL PMID 22120737 JRNL DOI 10.1107/S0907444911041102 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.O'NEILL,A.ROUJEINIKOVA REMARK 1 TITL CLONING, PURIFICATION AND CRYSTALLIZATION OF MOTB, A STATOR REMARK 1 TITL 2 COMPONENT OF THE PROTON-DRIVEN BACTERIAL FLAGELLAR MOTOR. REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 37792 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1903 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2684 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.53 REMARK 3 BIN R VALUE (WORKING SET) : 0.2400 REMARK 3 BIN FREE R VALUE SET COUNT : 134 REMARK 3 BIN FREE R VALUE : 0.3420 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5187 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 45 REMARK 3 SOLVENT ATOMS : 614 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.39000 REMARK 3 B22 (A**2) : 0.39000 REMARK 3 B33 (A**2) : -0.78000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.282 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.209 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.143 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.641 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.906 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5553 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7548 ; 1.422 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 695 ; 5.928 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 275 ;38.613 ;24.691 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1013 ;15.995 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 41 ;20.652 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 841 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4250 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3403 ; 0.911 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5573 ; 1.651 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2150 ; 2.318 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1975 ; 3.793 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 91 A 252 REMARK 3 ORIGIN FOR THE GROUP (A): -10.3480 1.2790 7.5370 REMARK 3 T TENSOR REMARK 3 T11: 0.0827 T22: 0.0697 REMARK 3 T33: 0.0262 T12: 0.0062 REMARK 3 T13: -0.0177 T23: -0.0184 REMARK 3 L TENSOR REMARK 3 L11: 0.6829 L22: 0.6146 REMARK 3 L33: 0.5831 L12: 0.2340 REMARK 3 L13: 0.4346 L23: 0.0066 REMARK 3 S TENSOR REMARK 3 S11: -0.0770 S12: 0.0047 S13: 0.0209 REMARK 3 S21: 0.0602 S22: 0.0822 S23: -0.0750 REMARK 3 S31: 0.0159 S32: 0.0334 S33: -0.0053 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 93 B 252 REMARK 3 ORIGIN FOR THE GROUP (A): -30.0910 25.5350 -9.1880 REMARK 3 T TENSOR REMARK 3 T11: 0.0658 T22: 0.0641 REMARK 3 T33: 0.0105 T12: -0.0024 REMARK 3 T13: 0.0006 T23: 0.0082 REMARK 3 L TENSOR REMARK 3 L11: 0.2358 L22: 1.4904 REMARK 3 L33: 0.4896 L12: -0.1411 REMARK 3 L13: 0.0837 L23: -0.2837 REMARK 3 S TENSOR REMARK 3 S11: 0.0592 S12: 0.0464 S13: 0.0153 REMARK 3 S21: -0.0379 S22: -0.1029 S23: -0.0461 REMARK 3 S31: -0.0338 S32: -0.0045 S33: 0.0437 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 84 C 252 REMARK 3 ORIGIN FOR THE GROUP (A): -23.7300 -10.3850 6.2750 REMARK 3 T TENSOR REMARK 3 T11: 0.1124 T22: 0.0431 REMARK 3 T33: 0.0289 T12: -0.0253 REMARK 3 T13: 0.0101 T23: 0.0048 REMARK 3 L TENSOR REMARK 3 L11: 0.9867 L22: 1.1011 REMARK 3 L33: 0.6821 L12: 0.2766 REMARK 3 L13: 0.1202 L23: -0.2399 REMARK 3 S TENSOR REMARK 3 S11: 0.0335 S12: -0.0121 S13: -0.1018 REMARK 3 S21: 0.1023 S22: 0.0323 S23: 0.0990 REMARK 3 S31: 0.1736 S32: -0.0819 S33: -0.0658 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 93 D 251 REMARK 3 ORIGIN FOR THE GROUP (A): -42.9800 14.4410 -11.2050 REMARK 3 T TENSOR REMARK 3 T11: 0.0783 T22: 0.0697 REMARK 3 T33: 0.0477 T12: -0.0186 REMARK 3 T13: -0.0275 T23: -0.0169 REMARK 3 L TENSOR REMARK 3 L11: 0.4307 L22: 1.1080 REMARK 3 L33: 0.6826 L12: -0.2035 REMARK 3 L13: 0.1085 L23: -0.1695 REMARK 3 S TENSOR REMARK 3 S11: 0.0267 S12: -0.0045 S13: -0.0663 REMARK 3 S21: -0.1626 S22: -0.0305 S23: 0.2184 REMARK 3 S31: 0.0704 S32: -0.1389 S33: 0.0038 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 3S0H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-MAY-11. REMARK 100 THE DEPOSITION ID IS D_1000065605. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-09 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.87 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.1 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37792 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 51.571 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : 0.09800 REMARK 200 R SYM (I) : 0.09800 REMARK 200 FOR THE DATA SET : 6.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : 0.34300 REMARK 200 R SYM FOR SHELL (I) : 0.34300 REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.58900 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 95.38350 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 31.79450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -98.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -187.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 84 REMARK 465 ILE A 85 REMARK 465 ASP A 86 REMARK 465 PRO A 87 REMARK 465 PHE A 88 REMARK 465 THR A 89 REMARK 465 SER A 90 REMARK 465 LYS A 253 REMARK 465 GLN A 254 REMARK 465 GLN A 255 REMARK 465 GLU A 256 REMARK 465 GLY B 84 REMARK 465 ILE B 85 REMARK 465 ASP B 86 REMARK 465 PRO B 87 REMARK 465 PHE B 88 REMARK 465 THR B 89 REMARK 465 SER B 90 REMARK 465 GLN B 91 REMARK 465 ASN B 92 REMARK 465 LYS B 253 REMARK 465 GLN B 254 REMARK 465 GLN B 255 REMARK 465 GLU B 256 REMARK 465 LYS C 253 REMARK 465 GLN C 254 REMARK 465 GLN C 255 REMARK 465 GLU C 256 REMARK 465 GLY D 84 REMARK 465 ILE D 85 REMARK 465 ASP D 86 REMARK 465 PRO D 87 REMARK 465 PHE D 88 REMARK 465 THR D 89 REMARK 465 SER D 90 REMARK 465 GLN D 91 REMARK 465 ASN D 92 REMARK 465 HIS D 252 REMARK 465 LYS D 253 REMARK 465 GLN D 254 REMARK 465 GLN D 255 REMARK 465 GLU D 256 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 419 O HOH A 524 1.98 REMARK 500 OE1 GLU D 126 O HOH D 518 2.01 REMARK 500 O HOH B 505 O HOH B 525 2.03 REMARK 500 O HOH A 274 O HOH A 484 2.18 REMARK 500 O HOH A 497 O HOH A 855 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 101 1.46 55.96 REMARK 500 ARG A 101 -14.43 60.57 REMARK 500 ARG A 101 -35.65 67.06 REMARK 500 LYS A 102 -78.60 -124.09 REMARK 500 LYS A 102 -78.60 -110.57 REMARK 500 LYS A 102 -78.60 -95.98 REMARK 500 ASN A 215 45.82 -81.92 REMARK 500 ASP A 234 45.79 -104.49 REMARK 500 ASN A 236 15.03 -141.80 REMARK 500 ARG B 101 -5.68 83.64 REMARK 500 LEU B 124 -35.18 -135.67 REMARK 500 THR B 166 125.26 -35.13 REMARK 500 VAL B 169 -2.39 -59.89 REMARK 500 THR B 171 -167.55 -122.36 REMARK 500 THR B 171 -167.49 -122.36 REMARK 500 PRO B 251 -71.49 -57.11 REMARK 500 ILE C 99 -81.41 -69.95 REMARK 500 ALA C 100 61.96 -116.75 REMARK 500 ARG C 101 -24.69 58.82 REMARK 500 LEU C 124 -31.35 -136.65 REMARK 500 LEU C 168 79.23 -117.15 REMARK 500 PRO C 251 -74.39 -69.75 REMARK 500 ALA D 100 16.23 52.17 REMARK 500 LYS D 102 74.14 -157.74 REMARK 500 ASN D 134 104.67 -54.39 REMARK 500 ASP D 164 -175.19 -69.36 REMARK 500 VAL D 169 -37.60 -138.44 REMARK 500 ASN D 210 68.46 -119.54 REMARK 500 ASP D 216 14.51 -158.84 REMARK 500 SER D 217 135.32 -178.97 REMARK 500 LEU D 218 -5.35 -56.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 8 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 9 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 10 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3S02 RELATED DB: PDB REMARK 900 RELATED ID: 3S03 RELATED DB: PDB REMARK 900 RELATED ID: 3S06 RELATED DB: PDB REMARK 900 RELATED ID: 3S0W RELATED DB: PDB REMARK 900 RELATED ID: 3S0Y RELATED DB: PDB DBREF 3S0H A 90 256 UNP P56427 MOTB_HELPY 91 257 DBREF 3S0H B 90 256 UNP P56427 MOTB_HELPY 91 257 DBREF 3S0H C 90 256 UNP P56427 MOTB_HELPY 91 257 DBREF 3S0H D 90 256 UNP P56427 MOTB_HELPY 91 257 SEQADV 3S0H GLY A 84 UNP P56427 EXPRESSION TAG SEQADV 3S0H ILE A 85 UNP P56427 EXPRESSION TAG SEQADV 3S0H ASP A 86 UNP P56427 EXPRESSION TAG SEQADV 3S0H PRO A 87 UNP P56427 EXPRESSION TAG SEQADV 3S0H PHE A 88 UNP P56427 EXPRESSION TAG SEQADV 3S0H THR A 89 UNP P56427 EXPRESSION TAG SEQADV 3S0H GLY B 84 UNP P56427 EXPRESSION TAG SEQADV 3S0H ILE B 85 UNP P56427 EXPRESSION TAG SEQADV 3S0H ASP B 86 UNP P56427 EXPRESSION TAG SEQADV 3S0H PRO B 87 UNP P56427 EXPRESSION TAG SEQADV 3S0H PHE B 88 UNP P56427 EXPRESSION TAG SEQADV 3S0H THR B 89 UNP P56427 EXPRESSION TAG SEQADV 3S0H GLY C 84 UNP P56427 EXPRESSION TAG SEQADV 3S0H ILE C 85 UNP P56427 EXPRESSION TAG SEQADV 3S0H ASP C 86 UNP P56427 EXPRESSION TAG SEQADV 3S0H PRO C 87 UNP P56427 EXPRESSION TAG SEQADV 3S0H PHE C 88 UNP P56427 EXPRESSION TAG SEQADV 3S0H THR C 89 UNP P56427 EXPRESSION TAG SEQADV 3S0H GLY D 84 UNP P56427 EXPRESSION TAG SEQADV 3S0H ILE D 85 UNP P56427 EXPRESSION TAG SEQADV 3S0H ASP D 86 UNP P56427 EXPRESSION TAG SEQADV 3S0H PRO D 87 UNP P56427 EXPRESSION TAG SEQADV 3S0H PHE D 88 UNP P56427 EXPRESSION TAG SEQADV 3S0H THR D 89 UNP P56427 EXPRESSION TAG SEQRES 1 A 173 GLY ILE ASP PRO PHE THR SER GLN ASN THR GLU THR LYS SEQRES 2 A 173 ALA THR ILE ALA ARG LYS GLY GLU GLY SER VAL LEU GLU SEQRES 3 A 173 GLN ILE ASP GLN GLY SER ILE LEU LYS LEU PRO SER ASN SEQRES 4 A 173 LEU LEU PHE GLU ASN ALA THR SER ASP ALA ILE ASN GLN SEQRES 5 A 173 ASP MET MET LEU TYR ILE GLU ARG ILE ALA LYS ILE ILE SEQRES 6 A 173 GLN LYS LEU PRO LYS ARG VAL HIS ILE ASN VAL ARG GLY SEQRES 7 A 173 PHE THR ASP ASP THR PRO LEU VAL LYS THR ARG PHE LYS SEQRES 8 A 173 SER HIS TYR GLU LEU ALA ALA ASN ARG ALA TYR ARG VAL SEQRES 9 A 173 MET LYS VAL LEU ILE GLN TYR GLY VAL ASN PRO ASN GLN SEQRES 10 A 173 LEU SER PHE SER SER TYR GLY SER THR ASN PRO ILE ALA SEQRES 11 A 173 PRO ASN ASP SER LEU GLU ASN ARG MET LYS ASN ASN ARG SEQRES 12 A 173 VAL GLU ILE PHE PHE SER THR ASP ALA ASN ASP LEU SER SEQRES 13 A 173 LYS ILE HIS SER ILE LEU ASP ASN GLU PHE ASN PRO HIS SEQRES 14 A 173 LYS GLN GLN GLU SEQRES 1 B 173 GLY ILE ASP PRO PHE THR SER GLN ASN THR GLU THR LYS SEQRES 2 B 173 ALA THR ILE ALA ARG LYS GLY GLU GLY SER VAL LEU GLU SEQRES 3 B 173 GLN ILE ASP GLN GLY SER ILE LEU LYS LEU PRO SER ASN SEQRES 4 B 173 LEU LEU PHE GLU ASN ALA THR SER ASP ALA ILE ASN GLN SEQRES 5 B 173 ASP MET MET LEU TYR ILE GLU ARG ILE ALA LYS ILE ILE SEQRES 6 B 173 GLN LYS LEU PRO LYS ARG VAL HIS ILE ASN VAL ARG GLY SEQRES 7 B 173 PHE THR ASP ASP THR PRO LEU VAL LYS THR ARG PHE LYS SEQRES 8 B 173 SER HIS TYR GLU LEU ALA ALA ASN ARG ALA TYR ARG VAL SEQRES 9 B 173 MET LYS VAL LEU ILE GLN TYR GLY VAL ASN PRO ASN GLN SEQRES 10 B 173 LEU SER PHE SER SER TYR GLY SER THR ASN PRO ILE ALA SEQRES 11 B 173 PRO ASN ASP SER LEU GLU ASN ARG MET LYS ASN ASN ARG SEQRES 12 B 173 VAL GLU ILE PHE PHE SER THR ASP ALA ASN ASP LEU SER SEQRES 13 B 173 LYS ILE HIS SER ILE LEU ASP ASN GLU PHE ASN PRO HIS SEQRES 14 B 173 LYS GLN GLN GLU SEQRES 1 C 173 GLY ILE ASP PRO PHE THR SER GLN ASN THR GLU THR LYS SEQRES 2 C 173 ALA THR ILE ALA ARG LYS GLY GLU GLY SER VAL LEU GLU SEQRES 3 C 173 GLN ILE ASP GLN GLY SER ILE LEU LYS LEU PRO SER ASN SEQRES 4 C 173 LEU LEU PHE GLU ASN ALA THR SER ASP ALA ILE ASN GLN SEQRES 5 C 173 ASP MET MET LEU TYR ILE GLU ARG ILE ALA LYS ILE ILE SEQRES 6 C 173 GLN LYS LEU PRO LYS ARG VAL HIS ILE ASN VAL ARG GLY SEQRES 7 C 173 PHE THR ASP ASP THR PRO LEU VAL LYS THR ARG PHE LYS SEQRES 8 C 173 SER HIS TYR GLU LEU ALA ALA ASN ARG ALA TYR ARG VAL SEQRES 9 C 173 MET LYS VAL LEU ILE GLN TYR GLY VAL ASN PRO ASN GLN SEQRES 10 C 173 LEU SER PHE SER SER TYR GLY SER THR ASN PRO ILE ALA SEQRES 11 C 173 PRO ASN ASP SER LEU GLU ASN ARG MET LYS ASN ASN ARG SEQRES 12 C 173 VAL GLU ILE PHE PHE SER THR ASP ALA ASN ASP LEU SER SEQRES 13 C 173 LYS ILE HIS SER ILE LEU ASP ASN GLU PHE ASN PRO HIS SEQRES 14 C 173 LYS GLN GLN GLU SEQRES 1 D 173 GLY ILE ASP PRO PHE THR SER GLN ASN THR GLU THR LYS SEQRES 2 D 173 ALA THR ILE ALA ARG LYS GLY GLU GLY SER VAL LEU GLU SEQRES 3 D 173 GLN ILE ASP GLN GLY SER ILE LEU LYS LEU PRO SER ASN SEQRES 4 D 173 LEU LEU PHE GLU ASN ALA THR SER ASP ALA ILE ASN GLN SEQRES 5 D 173 ASP MET MET LEU TYR ILE GLU ARG ILE ALA LYS ILE ILE SEQRES 6 D 173 GLN LYS LEU PRO LYS ARG VAL HIS ILE ASN VAL ARG GLY SEQRES 7 D 173 PHE THR ASP ASP THR PRO LEU VAL LYS THR ARG PHE LYS SEQRES 8 D 173 SER HIS TYR GLU LEU ALA ALA ASN ARG ALA TYR ARG VAL SEQRES 9 D 173 MET LYS VAL LEU ILE GLN TYR GLY VAL ASN PRO ASN GLN SEQRES 10 D 173 LEU SER PHE SER SER TYR GLY SER THR ASN PRO ILE ALA SEQRES 11 D 173 PRO ASN ASP SER LEU GLU ASN ARG MET LYS ASN ASN ARG SEQRES 12 D 173 VAL GLU ILE PHE PHE SER THR ASP ALA ASN ASP LEU SER SEQRES 13 D 173 LYS ILE HIS SER ILE LEU ASP ASN GLU PHE ASN PRO HIS SEQRES 14 D 173 LYS GLN GLN GLU HET SO4 A 1 5 HET SO4 A 8 5 HET SO4 B 3 5 HET SO4 B 4 5 HET SO4 B 6 5 HET SO4 C 7 5 HET SO4 C 9 5 HET SO4 C 10 5 HET SO4 D 2 5 HETNAM SO4 SULFATE ION FORMUL 5 SO4 9(O4 S 2-) FORMUL 14 HOH *614(H2 O) HELIX 1 1 PRO A 120 LEU A 124 5 5 HELIX 2 2 ASP A 136 LEU A 151 1 16 HELIX 3 3 SER A 175 TYR A 194 1 20 HELIX 4 4 ASN A 197 ASN A 199 5 3 HELIX 5 5 SER A 217 ASN A 225 1 9 HELIX 6 6 ASN A 236 ASN A 250 1 15 HELIX 7 7 PRO B 120 LEU B 124 5 5 HELIX 8 8 ASN B 134 MET B 137 5 4 HELIX 9 9 MET B 138 GLN B 149 1 12 HELIX 10 10 SER B 175 TYR B 194 1 20 HELIX 11 11 ASN B 197 ASN B 199 5 3 HELIX 12 12 SER B 217 ASN B 225 1 9 HELIX 13 13 ASN B 236 ASN B 250 1 15 HELIX 14 14 PRO C 120 LEU C 124 5 5 HELIX 15 15 ASP C 136 GLN C 149 1 14 HELIX 16 16 SER C 175 TYR C 194 1 20 HELIX 17 17 ASN C 197 ASN C 199 5 3 HELIX 18 18 SER C 217 ASN C 224 1 8 HELIX 19 19 ASN C 236 ASN C 250 1 15 HELIX 20 20 SER D 121 PHE D 125 1 5 HELIX 21 21 MET D 137 GLN D 149 1 13 HELIX 22 22 SER D 175 TYR D 194 1 20 HELIX 23 23 ASN D 197 ASN D 199 5 3 HELIX 24 24 ASN D 220 ASN D 225 1 6 HELIX 25 25 ASN D 236 ASN D 250 1 15 SHEET 1 A12 GLU A 94 LYS A 96 0 SHEET 2 A12 VAL A 107 ILE A 111 -1 O LEU A 108 N THR A 95 SHEET 3 A12 GLY A 114 LEU A 119 -1 O GLY A 114 N ILE A 111 SHEET 4 A12 VAL A 227 SER A 232 -1 O VAL A 227 N LEU A 119 SHEET 5 A12 HIS A 156 GLY A 161 -1 N HIS A 156 O SER A 232 SHEET 6 A12 LEU A 201 SER A 205 1 O SER A 204 N VAL A 159 SHEET 7 A12 LEU C 201 SER C 205 -1 O PHE C 203 N SER A 205 SHEET 8 A12 HIS C 156 GLY C 161 1 N VAL C 159 O SER C 204 SHEET 9 A12 VAL C 227 SER C 232 -1 O GLU C 228 N ARG C 160 SHEET 10 A12 GLY C 114 LEU C 119 -1 N LEU C 119 O VAL C 227 SHEET 11 A12 VAL C 107 ILE C 111 -1 N VAL C 107 O LYS C 118 SHEET 12 A12 GLU C 94 LYS C 96 -1 N THR C 95 O LEU C 108 SHEET 1 B12 GLU B 94 LYS B 96 0 SHEET 2 B12 VAL B 107 ILE B 111 -1 O LEU B 108 N THR B 95 SHEET 3 B12 GLY B 114 LEU B 119 -1 O LYS B 118 N VAL B 107 SHEET 4 B12 VAL B 227 SER B 232 -1 O PHE B 231 N SER B 115 SHEET 5 B12 HIS B 156 GLY B 161 -1 N HIS B 156 O SER B 232 SHEET 6 B12 LEU B 201 SER B 205 1 O SER B 204 N VAL B 159 SHEET 7 B12 LEU D 201 SER D 205 -1 O SER D 205 N PHE B 203 SHEET 8 B12 VAL D 155 PHE D 162 1 N VAL D 159 O SER D 204 SHEET 9 B12 ARG D 226 THR D 233 -1 O GLU D 228 N ARG D 160 SHEET 10 B12 GLY D 114 PRO D 120 -1 N SER D 115 O PHE D 231 SHEET 11 B12 LEU D 108 ILE D 111 -1 N GLU D 109 O ILE D 116 SHEET 12 B12 GLU D 94 THR D 95 -1 N THR D 95 O LEU D 108 SITE 1 AC1 6 HOH A 37 SER A 175 HIS A 176 TYR A 177 SITE 2 AC1 6 HOH A 364 HOH A 555 SITE 1 AC2 4 TYR A 185 ARG A 186 LYS A 189 ASN A 215 SITE 1 AC3 4 SER B 175 HIS B 176 TYR B 177 HOH B 397 SITE 1 AC4 4 ASN B 127 ALA B 128 ARG B 221 ARG C 143 SITE 1 AC5 6 TYR B 185 ARG B 186 LYS B 189 PRO B 214 SITE 2 AC5 6 ASN B 215 HOH B 782 SITE 1 AC6 5 ARG A 101 PRO C 152 LYS C 153 ARG C 154 SITE 2 AC6 5 HOH C 717 SITE 1 AC7 4 ASN A 247 GLN C 91 ASN C 92 HOH C 726 SITE 1 AC8 6 SER C 175 HIS C 176 TYR C 177 HOH C 282 SITE 2 AC8 6 HOH C 290 HOH C 561 SITE 1 AC9 5 SER D 175 HIS D 176 TYR D 177 HOH D 495 SITE 2 AC9 5 HOH D 528 CRYST1 72.972 72.972 127.178 90.00 90.00 90.00 P 43 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013704 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013704 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007863 0.00000